CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 153 | M153T | nonsyn | aTg | aCg | 10286 | 10264 | 0.997861 | 22019-22021 | |
S | 153 | M153T | nonsyn | aTG | aCT | 10286 | 20 | 0.00194439 | 22019-22021 | |
S | 153 | M153T | nonsyn | aTG | aCA | 10286 | 1 | 0.0000972195 | 22019-22021 | |
S | 153 | M153T | nonsyn | aTG | aCC | 10286 | 1 | 0.0000972195 | 22019-22021 | |
S | 153 | M153I | nonsyn | atG | atT | 9912 | 8511 | 0.858656 | 22019-22021 | |
S | 153 | M153I | nonsyn | atG | atA | 9912 | 1231 | 0.124193 | 22019-22021 | |
S | 153 | M153I | nonsyn | atG | atC | 9912 | 170 | 0.0171509 | 22019-22021 | |
S | 153 | M153V | nonsyn | Atg | Gtg | 737 | 729 | 0.989145 | 22019-22021 | |
S | 153 | M153V | nonsyn | AtG | GtT | 737 | 6 | 0.00814111 | 22019-22021 | |
S | 153 | M153V | nonsyn | AtG | GtA | 737 | 2 | 0.0027137 | 22019-22021 | |
S | 153 | M153del | del | ATG | --- | 429 | 429 | 1 | 22019-22021 | |
S | 153 | M153K | nonsyn | aTg | aAg | 236 | 221 | 0.936441 | 22019-22021 | |
S | 153 | M153K | nonsyn | aTG | aAA | 236 | 15 | 0.0635593 | 22019-22021 | |
S | 153 | M153L | nonsyn | Atg | Ttg | 121 | 59 | 0.487603 | 22019-22021 | |
S | 153 | M153L | nonsyn | Atg | Ctg | 121 | 42 | 0.347107 | 22019-22021 | |
S | 153 | M153L | nonsyn | AtG | TtA | 121 | 20 | 0.165289 | 22019-22021 | |
S | 153 | M153F | nonsyn | AtG | TtT | 36 | 36 | 1 | 22019-22021 | |
S | 153 | M153N | nonsyn | aTG | aAT | 33 | 32 | 0.969697 | 22019-22021 | |
S | 153 | M153N | nonsyn | aTG | aAC | 33 | 1 | 0.030303 | 22019-22021 | |
S | 153 | M153R | nonsyn | aTg | aGg | 30 | 30 | 1 | 22019-22021 | |
S | 153 | M153X | nonsyn | ATG | TAA | 24 | 15 | 0.625 | 22019-22021 | |
S | 153 | M153X | nonsyn | ATg | TAg | 24 | 9 | 0.375 | 22019-22021 | |
S | 153 | M153Y | nonsyn | ATG | TAT | 23 | 23 | 1 | 22019-22021 | |
S | 153 | M153del1 | del | atG | at- | 19 | 10 | 0.526316 | 22019-22021 | |
S | 153 | M153del1 | del | Atg | -tg | 19 | 5 | 0.263158 | 22019-22021 | |
S | 153 | M153del1 | del | AtG | Ct- | 19 | 1 | 0.0526316 | 22019-22021 | |
S | 153 | M153del1 | del | ATG | -NN | 19 | 1 | 0.0526316 | 22019-22021 | |
S | 153 | M153del1 | del | ATg | -Cg | 19 | 1 | 0.0526316 | 22019-22021 | |
S | 153 | M153del1 | del | aTG | aC- | 19 | 1 | 0.0526316 | 22019-22021 | |
S | 153 | M153D | nonsyn | ATG | GAT | 7 | 7 | 1 | 22019-22021 | |
S | 153 | M153E | nonsyn | ATg | GAg | 6 | 6 | 1 | 22019-22021 | |
S | 153 | M153W | nonsyn | ATg | TGg | 4 | 4 | 1 | 22019-22021 | |
S | 153 | M153Q | nonsyn | ATg | CAg | 2 | 2 | 1 | 22019-22021 | |
S | 153 | M153del2 | del | aTG | a-- | 2 | 1 | 0.5 | 22019-22021 | |
S | 153 | M153del2 | del | ATg | --g | 2 | 1 | 0.5 | 22019-22021 | |
S | 153 | M153S | nonsyn | ATG | TCT | 2 | 1 | 0.5 | 22019-22021 | |
S | 153 | M153S | nonsyn | ATG | TCA | 2 | 1 | 0.5 | 22019-22021 | |
S | 153 | M153G | nonsyn | ATG | GGT | 1 | 1 | 1 | 22019-22021 | |
S | 153 | M153A | nonsyn | ATg | GCg | 1 | 1 | 1 | 22019-22021 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 153 | M153T | aTg | aCg | 10264 | 10286 | All | 0.001963 |
S | 153 | M153T | aTG | aCT | 20 | 10286 | All | 0.000004 |
S | 153 | M153T | aTG | aCA | 1 | 10286 | All | 0 |
S | 153 | M153T | aTG | aCC | 1 | 10286 | All | 0 |
S | 153 | M153I | atG | atT | 8511 | 9912 | All | 0.001628 |
S | 153 | M153I | atG | atA | 1231 | 9912 | All | 0.000235 |
S | 153 | M153I | atG | atC | 170 | 9912 | All | 0.000033 |
S | 153 | M153T | aTg | aCg | 4973 | 4977 | B.1.1.284 | 0.534099 |
S | 153 | M153T | aTG | aCT | 4 | 4977 | B.1.1.284 | 0.00043 |
S | 153 | M153I | atG | atT | 1977 | 2025 | AY.4 | 0.003077 |
S | 153 | M153I | atG | atA | 26 | 2025 | AY.4 | 0.00004 |
S | 153 | M153I | atG | atC | 22 | 2025 | AY.4 | 0.000034 |
S | 153 | M153I | atG | atT | 842 | 968 | B.1.1.7 | 0.000754 |
S | 153 | M153I | atG | atA | 94 | 968 | B.1.1.7 | 0.000084 |
S | 153 | M153I | atG | atC | 32 | 968 | B.1.1.7 | 0.000029 |
S | 153 | M153T | aTg | aCg | 900 | 902 | B.1.1 | 0.016327 |
S | 153 | M153T | aTG | aCT | 2 | 902 | B.1.1 | 0.000036 |
S | 153 | M153V | Atg | Gtg | 729 | 737 | All | 0.000139 |
S | 153 | M153V | AtG | GtT | 6 | 737 | All | 0.000001 |
S | 153 | M153V | AtG | GtA | 2 | 737 | All | 0 |
S | 153 | M153T | aTg | aCg | 727 | 727 | B.1.1.7 | 0.000651 |
S | 153 | M153T | aTg | aCg | 702 | 702 | B.1 | 0.00643 |
S | 153 | M153I | atG | atT | 467 | 486 | B.1.617.2 | 0.001758 |
S | 153 | M153I | atG | atA | 16 | 486 | B.1.617.2 | 0.00006 |
S | 153 | M153I | atG | atC | 3 | 486 | B.1.617.2 | 0.000011 |
S | 153 | M153T | aTg | aCg | 473 | 473 | B.1.1.141 | 0.95171 |
S | 153 | M153I | atG | atT | 385 | 449 | AY.44 | 0.002343 |
S | 153 | M153I | atG | atA | 63 | 449 | AY.44 | 0.000383 |
S | 153 | M153I | atG | atC | 1 | 449 | AY.44 | 0.000006 |
S | 153 | M153T | aTg | aCg | 431 | 444 | B.1.627 | 0.870707 |
S | 153 | M153T | aTG | aCT | 13 | 444 | B.1.627 | 0.026263 |
S | 153 | M153del | ATG | --- | 429 | 429 | All | 0.000082 |
S | 153 | M153I | atG | atA | 356 | 423 | AY.3 | 0.003541 |
S | 153 | M153I | atG | atT | 67 | 423 | AY.3 | 0.000666 |
S | 153 | M153T | aTg | aCg | 410 | 410 | B.1.1.397 | 0.923423 |
S | 153 | M153I | atG | atT | 380 | 388 | AY.43 | 0.001684 |
S | 153 | M153I | atG | atC | 6 | 388 | AY.43 | 0.000027 |
S | 153 | M153I | atG | atA | 2 | 388 | AY.43 | 0.000009 |
S | 153 | M153I | atG | atT | 368 | 368 | B.1.1.222 | 0.075071 |
S | 153 | M153T | aTg | aCg | 311 | 311 | B.1.1.280 | 0.959877 |
S | 153 | M153I | atG | atA | 206 | 293 | B.1 | 0.001887 |
S | 153 | M153I | atG | atT | 86 | 293 | B.1 | 0.000788 |
S | 153 | M153I | atG | atC | 1 | 293 | B.1 | 0.000009 |
S | 153 | M153I | atG | atT | 285 | 292 | B.1.2 | 0.00251 |
S | 153 | M153I | atG | atA | 5 | 292 | B.1.2 | 0.000044 |
S | 153 | M153I | atG | atC | 2 | 292 | B.1.2 | 0.000018 |
S | 153 | M153T | aTg | aCg | 277 | 277 | B.1.1.28 | 0.086212 |
S | 153 | M153I | atG | atT | 244 | 246 | AY.6 | 0.010035 |
S | 153 | M153I | atG | atA | 2 | 246 | AY.6 | 0.000082 |
S | 153 | M153K | aTg | aAg | 221 | 236 | All | 0.000042 |
S | 153 | M153K | aTG | aAA | 15 | 236 | All | 0.000003 |
S | 153 | M153I | atG | atA | 235 | 235 | B.1.599 | 0.857664 |
S | 153 | M153I | atG | atT | 204 | 225 | AY.25 | 0.001227 |
S | 153 | M153I | atG | atA | 19 | 225 | AY.25 | 0.000114 |
S | 153 | M153I | atG | atC | 2 | 225 | AY.25 | 0.000012 |
S | 153 | M153I | atG | atT | 203 | 205 | AY.102 | 0.005382 |
S | 153 | M153I | atG | atC | 2 | 205 | AY.102 | 0.000053 |
S | 153 | M153K | aTg | aAg | 193 | 204 | B.1.1.7 | 0.000173 |
S | 153 | M153K | aTG | aAA | 11 | 204 | B.1.1.7 | 0.00001 |
S | 153 | M153I | atG | atT | 197 | 204 | B.1.177 | 0.002594 |
S | 153 | M153I | atG | atA | 4 | 204 | B.1.177 | 0.000053 |
S | 153 | M153I | atG | atC | 3 | 204 | B.1.177 | 0.00004 |
S | 153 | M153I | atG | atT | 168 | 171 | AY.103 | 0.001043 |
S | 153 | M153I | atG | atA | 3 | 171 | AY.103 | 0.000019 |
S | 153 | M153I | atG | atT | 154 | 155 | AY.61 | 0.016136 |
S | 153 | M153I | atG | atA | 1 | 155 | AY.61 | 0.000105 |
S | 153 | M153T | aTg | aCg | 131 | 131 | B.1.632 | 0.879195 |
S | 153 | M153I | atG | atT | 123 | 123 | B.1.36.8 | 0.123 |
S | 153 | M153L | Atg | Ttg | 59 | 121 | All | 0.000011 |
S | 153 | M153L | Atg | Ctg | 42 | 121 | All | 0.000008 |
S | 153 | M153L | AtG | TtA | 20 | 121 | All | 0.000004 |
S | 153 | M153I | atG | atT | 116 | 118 | B.1.351 | 0.003448 |
S | 153 | M153I | atG | atA | 2 | 118 | B.1.351 | 0.000059 |
S | 153 | M153I | atG | atT | 110 | 112 | AY.46 | 0.011449 |
S | 153 | M153I | atG | atC | 2 | 112 | AY.46 | 0.000208 |
S | 153 | M153V | Atg | Gtg | 104 | 104 | B.1.1.7 | 0.000093 |
S | 153 | M153I | atG | atT | 96 | 96 | B.1.1 | 0.001742 |
S | 153 | M153I | atG | atT | 83 | 93 | B.1.160 | 0.002589 |
S | 153 | M153I | atG | atA | 9 | 93 | B.1.160 | 0.000281 |
S | 153 | M153I | atG | atC | 1 | 93 | B.1.160 | 0.000031 |
S | 153 | M153I | atG | atT | 91 | 91 | AY.33 | 0.006077 |
S | 153 | M153V | Atg | Gtg | 90 | 90 | B.1.2 | 0.000792 |
S | 153 | M153I | atG | atT | 77 | 90 | P.1 | 0.001213 |
S | 153 | M153I | atG | atC | 8 | 90 | P.1 | 0.000126 |
S | 153 | M153I | atG | atA | 5 | 90 | P.1 | 0.000079 |
S | 153 | M153I | atG | atT | 61 | 85 | AY.20 | 0.002371 |
S | 153 | M153I | atG | atC | 19 | 85 | AY.20 | 0.000738 |
S | 153 | M153I | atG | atA | 5 | 85 | AY.20 | 0.000194 |
S | 153 | M153del | ATG | --- | 83 | 83 | AY.29.1 | 0.018302 |
S | 153 | M153I | atG | atT | 83 | 83 | B.1.1.234 | 1 |
S | 153 | M153V | Atg | Gtg | 80 | 80 | AY.3 | 0.000796 |
S | 153 | M153I | atG | atT | 77 | 77 | B.1.525 | 0.008713 |
S | 153 | M153I | atG | atT | 75 | 75 | AY.46.4 | 0.012338 |
S | 153 | M153I | atG | atT | 73 | 73 | B.1.214.2 | 0.043765 |
S | 153 | M153I | atG | atT | 62 | 71 | AY.39 | 0.001532 |
S | 153 | M153I | atG | atA | 8 | 71 | AY.39 | 0.000198 |
S | 153 | M153I | atG | atC | 1 | 71 | AY.39 | 0.000025 |
S | 153 | M153T | aTg | aCg | 64 | 64 | B.1.36 | 0.009338 |
S | 153 | M153I | atG | atT | 59 | 60 | AY.26 | 0.00167 |
S | 153 | M153I | atG | atC | 1 | 60 | AY.26 | 0.000028 |
S | 153 | M153V | Atg | Gtg | 56 | 58 | B.1 | 0.000513 |
S | 153 | M153V | AtG | GtT | 2 | 58 | B.1 | 0.000018 |
S | 153 | M153I | atG | atA | 44 | 54 | AY.99.2 | 0.004055 |
S | 153 | M153I | atG | atT | 10 | 54 | AY.99.2 | 0.000922 |
S | 153 | M153I | atG | atT | 53 | 53 | B.1.236 | 0.10883 |
S | 153 | M153V | Atg | Gtg | 48 | 48 | AY.36 | 0.007114 |
S | 153 | M153T | aTg | aCg | 45 | 45 | AY.25 | 0.000271 |
S | 153 | M153T | aTg | aCg | 45 | 45 | B.1.639 | 0.978261 |
S | 153 | M153del | ATG | --- | 44 | 44 | AY.43 | 0.000195 |
S | 153 | M153V | Atg | Gtg | 44 | 44 | B.1.617.2 | 0.000166 |
S | 153 | M153T | aTg | aCg | 43 | 43 | B.1.1.343 | 0.895833 |
S | 153 | M153I | atG | atT | 42 | 42 | AY.98.1 | 0.002034 |
S | 153 | M153F | AtG | TtT | 36 | 36 | All | 0.000007 |
S | 153 | M153L | Atg | Ttg | 15 | 36 | B.1.1.7 | 0.000013 |
S | 153 | M153L | AtG | TtA | 14 | 36 | B.1.1.7 | 0.000013 |
S | 153 | M153L | Atg | Ctg | 7 | 36 | B.1.1.7 | 0.000006 |
S | 153 | M153N | aTG | aAT | 32 | 33 | All | 0.000006 |
S | 153 | M153N | aTG | aAC | 1 | 33 | All | 0 |
S | 153 | M153I | atG | atT | 31 | 33 | AY.5 | 0.00064 |
S | 153 | M153I | atG | atA | 1 | 33 | AY.5 | 0.000021 |
S | 153 | M153I | atG | atC | 1 | 33 | AY.5 | 0.000021 |
S | 153 | M153T | aTg | aCg | 33 | 33 | B.1.1.83 | 0.089431 |
S | 153 | M153I | atG | atT | 32 | 32 | AY.120 | 0.00119 |
S | 153 | M153I | atG | atT | 31 | 32 | AY.47 | 0.000964 |
S | 153 | M153I | atG | atC | 1 | 32 | AY.47 | 0.000031 |
S | 153 | M153del | ATG | --- | 32 | 32 | B.1.1.7 | 0.000029 |
S | 153 | M153I | atG | atT | 28 | 31 | AY.118 | 0.001754 |
S | 153 | M153I | atG | atC | 3 | 31 | AY.118 | 0.000188 |
S | 153 | M153T | aTg | aCg | 31 | 31 | N.5 | 0.05477 |
S | 153 | M153R | aTg | aGg | 30 | 30 | All | 0.000006 |
S | 153 | M153I | atG | atT | 29 | 30 | AY.42 | 0.001167 |
S | 153 | M153I | atG | atA | 1 | 30 | AY.42 | 0.00004 |
S | 153 | M153V | Atg | Gtg | 29 | 29 | AY.103 | 0.00018 |
S | 153 | M153del | ATG | --- | 29 | 29 | AY.4 | 0.000045 |
S | 153 | M153I | atG | atT | 27 | 29 | B.1.36 | 0.003939 |
S | 153 | M153I | atG | atA | 2 | 29 | B.1.36 | 0.000292 |
S | 153 | M153T | aTg | aCg | 28 | 28 | AY.3.1 | 0.002387 |
S | 153 | M153V | Atg | Gtg | 27 | 27 | AY.23 | 0.001883 |
S | 153 | M153I | atG | atT | 26 | 27 | AY.29 | 0.00041 |
S | 153 | M153I | atG | atA | 1 | 27 | AY.29 | 0.000016 |
S | 153 | M153I | atG | atC | 27 | 27 | B.1.146 | 0.114407 |
S | 153 | M153I | atG | atA | 26 | 27 | B.1.577 | 0.017869 |
S | 153 | M153I | atG | atT | 1 | 27 | B.1.577 | 0.000687 |
S | 153 | M153I | atG | atT | 25 | 26 | B.1.617.1 | 0.003224 |
S | 153 | M153I | atG | atA | 1 | 26 | B.1.617.1 | 0.000129 |
S | 153 | M153del | ATG | --- | 25 | 25 | AY.25 | 0.00015 |
S | 153 | M153I | atG | atT | 25 | 25 | AY.39.1 | 0.00099 |
S | 153 | M153V | Atg | Gtg | 25 | 25 | AY.4 | 0.000039 |
S | 153 | M153I | atG | atA | 25 | 25 | B.1.177.57 | 0.007024 |
S | 153 | M153X | ATG | TAA | 15 | 24 | All | 0.000003 |
S | 153 | M153X | ATg | TAg | 9 | 24 | All | 0.000002 |
S | 153 | M153V | Atg | Gtg | 24 | 24 | AY.44 | 0.000146 |
S | 153 | M153F | AtG | TtT | 24 | 24 | B.1.1.7 | 0.000021 |
S | 153 | M153I | atG | atT | 24 | 24 | B.1.429 | 0.000565 |
S | 153 | M153Y | ATG | TAT | 23 | 23 | All | 0.000004 |
S | 153 | M153T | aTg | aCg | 23 | 23 | B.1.617.2 | 0.000087 |
S | 153 | M153I | atG | atT | 22 | 22 | AY.34 | 0.002133 |
S | 153 | M153T | aTg | aCg | 22 | 22 | B.1.1.160 | 0.52381 |
S | 153 | M153T | aTg | aCg | 22 | 22 | B.1.1.396 | 1 |
S | 153 | M153T | aTg | aCg | 22 | 22 | B.1.595 | 0.005741 |
S | 153 | M153I | atG | atT | 21 | 21 | AJ.1 | 0.954545 |
S | 153 | M153I | atG | atT | 21 | 21 | AY.85 | 0.008971 |
S | 153 | M153del | ATG | --- | 21 | 21 | B.1.351 | 0.000624 |
S | 153 | M153I | atG | atT | 20 | 20 | AY.120.1 | 0.006421 |
S | 153 | M153del | ATG | --- | 20 | 20 | B.1.617.2 | 0.000075 |
S | 153 | M153del1 | atG | at- | 10 | 19 | All | 0.000002 |
S | 153 | M153del1 | Atg | -tg | 5 | 19 | All | 0.000001 |
S | 153 | M153del1 | AtG | Ct- | 1 | 19 | All | 0 |
S | 153 | M153del1 | aTG | aC- | 1 | 19 | All | 0 |
S | 153 | M153del1 | ATG | -NN | 1 | 19 | All | 0 |
S | 153 | M153del1 | ATg | -Cg | 1 | 19 | All | 0 |
S | 153 | M153I | atG | atT | 19 | 19 | B.1.526 | 0.000447 |
S | 153 | M153V | Atg | Gtg | 19 | 19 | B.1.596 | 0.001656 |
S | 153 | M153I | atG | atT | 16 | 18 | AY.121 | 0.002165 |
S | 153 | M153I | atG | atA | 2 | 18 | AY.121 | 0.000271 |
S | 153 | M153T | aTg | aCg | 18 | 18 | B.1.1.409 | 0.050992 |
S | 153 | M153N | aTG | aAT | 17 | 18 | B.1.1.7 | 0.000015 |
S | 153 | M153N | aTG | aAC | 1 | 18 | B.1.1.7 | 0.000001 |
S | 153 | M153T | aTg | aCg | 18 | 18 | B.1.2 | 0.000158 |
S | 153 | M153V | Atg | Gtg | 18 | 18 | C.37 | 0.002089 |
S | 153 | M153I | atG | atT | 15 | 17 | AY.4.2 | 0.000325 |
S | 153 | M153I | atG | atC | 2 | 17 | AY.4.2 | 0.000043 |
S | 153 | M153I | atG | atT | 17 | 17 | AY.46.6 | 0.001228 |
S | 153 | M153T | aTg | aCg | 17 | 17 | B.1.1.319 | 0.298246 |
S | 153 | M153T | aTg | aCg | 17 | 17 | B.1.177.16 | 0.011296 |
S | 153 | M153I | atG | atT | 17 | 17 | B.1.258 | 0.001131 |
S | 153 | M153I | atG | atT | 15 | 16 | AY.16 | 0.005695 |
S | 153 | M153I | atG | atC | 1 | 16 | AY.16 | 0.00038 |
S | 153 | M153del | ATG | --- | 16 | 16 | AY.44 | 0.000097 |
S | 153 | M153T | aTg | aCg | 16 | 16 | B.1.1.330 | 1 |
S | 153 | M153Y | ATG | TAT | 16 | 16 | B.1.1.7 | 0.000014 |
S | 153 | M153X | ATG | TAA | 11 | 16 | B.1.1.7 | 0.00001 |
S | 153 | M153X | ATg | TAg | 5 | 16 | B.1.1.7 | 0.000004 |
S | 153 | M153I | atG | atT | 16 | 16 | B.1.179 | 0.06015 |
S | 153 | M153T | aTg | aCg | 16 | 16 | B.1.525 | 0.001811 |
S | 153 | M153I | atG | atT | 15 | 15 | AY.27 | 0.000971 |
S | 153 | M153L | Atg | Ctg | 13 | 15 | AY.43 | 0.000058 |
S | 153 | M153L | Atg | Ttg | 2 | 15 | AY.43 | 0.000009 |
S | 153 | M153I | atG | atT | 15 | 15 | AY.9.1 | 0.001256 |
S | 153 | M153V | Atg | Gtg | 13 | 15 | B.1.1 | 0.000236 |
S | 153 | M153V | AtG | GtT | 2 | 15 | B.1.1 | 0.000036 |
S | 153 | M153I | atG | atT | 15 | 15 | B.1.258.14 | 0.014706 |
S | 153 | M153I | atG | atT | 13 | 14 | AY.100 | 0.000598 |
S | 153 | M153I | atG | atA | 1 | 14 | AY.100 | 0.000046 |
S | 153 | M153I | atG | atT | 14 | 14 | AY.106 | 0.004689 |
S | 153 | M153T | aTg | aCg | 14 | 14 | AY.44 | 0.000085 |
S | 153 | M153I | atG | atT | 12 | 14 | B.1.637 | 0.000877 |
S | 153 | M153I | atG | atC | 1 | 14 | B.1.637 | 0.000073 |
S | 153 | M153I | atG | atA | 1 | 14 | B.1.637 | 0.000073 |
S | 153 | M153T | aTg | aCg | 14 | 14 | P.2 | 0.002613 |
S | 153 | M153T | aTg | aCg | 13 | 13 | AY.102 | 0.000345 |
S | 153 | M153I | atG | atA | 9 | 13 | AY.117 | 0.000761 |
S | 153 | M153I | atG | atT | 4 | 13 | AY.117 | 0.000338 |
S | 153 | M153I | atG | atT | 13 | 13 | AY.87 | 0.010824 |
S | 153 | M153T | aTg | aCg | 13 | 13 | B.1.1.203 | 0.220339 |
S | 153 | M153V | Atg | Gtg | 13 | 13 | B.1.177.57 | 0.003653 |
S | 153 | M153I | atG | atT | 12 | 12 | AY.23 | 0.000837 |
S | 153 | M153I | atG | atT | 12 | 12 | AY.29.1 | 0.002646 |
S | 153 | M153T | aTg | aCg | 12 | 12 | AY.42 | 0.000483 |
S | 153 | M153I | atG | atT | 12 | 12 | AY.54 | 0.001144 |
S | 153 | M153I | atG | atT | 12 | 12 | AY.75 | 0.000672 |
S | 153 | M153I | atG | atT | 12 | 12 | AY.84 | 0.005249 |
S | 153 | M153I | atG | atT | 12 | 12 | B.1.1.326 | 0.021127 |
S | 153 | M153I | atG | atT | 7 | 12 | B.1.621 | 0.00062 |
S | 153 | M153I | atG | atC | 5 | 12 | B.1.621 | 0.000443 |
S | 153 | M153I | atG | atT | 11 | 11 | AY.41 | 0.003233 |
S | 153 | M153I | atG | atT | 9 | 11 | B.1.1.519 | 0.000357 |
S | 153 | M153I | atG | atC | 2 | 11 | B.1.1.519 | 0.000079 |
S | 153 | M153T | aTg | aCg | 11 | 11 | B.1.177 | 0.000145 |
S | 153 | M153I | atG | atT | 11 | 11 | B.1.427 | 0.000555 |
S | 153 | M153T | aTg | aCg | 11 | 11 | B.1.509 | 0.009524 |
S | 153 | M153T | aTg | aCg | 10 | 10 | A.19 | 0.09434 |
S | 153 | M153del | ATG | --- | 10 | 10 | AY.103 | 0.000062 |
S | 153 | M153T | aTg | aCg | 10 | 10 | AY.34 | 0.00097 |
S | 153 | M153I | atG | atT | 10 | 10 | B.1.177.71 | 0.10101 |
S | 153 | M153T | aTg | aCg | 10 | 10 | B.1.258 | 0.000665 |
S | 153 | M153del1 | atG | at- | 10 | 10 | B.1.617.1 | 0.00129 |
S | 153 | M153T | aTg | aCg | 9 | 9 | AY.35 | 0.002097 |
S | 153 | M153del | ATG | --- | 9 | 9 | AY.39 | 0.000222 |
S | 153 | M153T | aTg | aCg | 9 | 9 | AY.4 | 0.000014 |
S | 153 | M153I | atG | atT | 8 | 9 | AY.4.5 | 0.00086 |
S | 153 | M153I | atG | atC | 1 | 9 | AY.4.5 | 0.000107 |
S | 153 | M153I | atG | atT | 9 | 9 | AY.75.1 | 0.001623 |
S | 153 | M153del | ATG | --- | 9 | 9 | B.1 | 0.000082 |
S | 153 | M153T | aTg | aCg | 9 | 9 | B.1.1.135 | 0.042254 |
S | 153 | M153del | ATG | --- | 9 | 9 | B.1.177 | 0.000119 |
S | 153 | M153I | atG | atA | 6 | 9 | B.1.311 | 0.001647 |
S | 153 | M153I | atG | atT | 2 | 9 | B.1.311 | 0.000549 |
S | 153 | M153I | atG | atC | 1 | 9 | B.1.311 | 0.000275 |
S | 153 | M153V | Atg | Gtg | 9 | 9 | B.1.324 | 0.014446 |
S | 153 | M153L | AtG | TtA | 5 | 9 | P.1 | 0.000079 |
S | 153 | M153L | Atg | Ttg | 4 | 9 | P.1 | 0.000063 |
S | 153 | M153del | ATG | --- | 8 | 8 | AY.119 | 0.000282 |
S | 153 | M153I | atG | atT | 8 | 8 | AY.45 | 0.000973 |
S | 153 | M153I | atG | atT | 8 | 8 | AY.5.4 | 0.002214 |
S | 153 | M153I | atG | atT | 8 | 8 | AY.98 | 0.000632 |
S | 153 | M153T | aTg | aCg | 8 | 8 | B | 0.001022 |
S | 153 | M153T | aTg | aCg | 8 | 8 | B.1.1.291 | 0.005939 |
S | 153 | M153V | Atg | Gtg | 8 | 8 | B.1.1.486 | 0.012618 |
S | 153 | M153I | atG | atA | 8 | 8 | B.1.1.54 | 0.024169 |
S | 153 | M153I | atG | atT | 8 | 8 | B.1.284 | 0.105263 |
S | 153 | M153T | aTg | aCg | 8 | 8 | B.1.336 | 0.019512 |
S | 153 | M153F | AtG | TtT | 8 | 8 | P.1 | 0.000126 |
S | 153 | M153T | aTg | aCg | 6 | 8 | P.1 | 0.000095 |
S | 153 | M153K | aTg | aAg | 5 | 8 | P.1 | 0.000079 |
S | 153 | M153K | aTG | aAA | 3 | 8 | P.1 | 0.000047 |
S | 153 | M153T | aTG | aCT | 1 | 8 | P.1 | 0.000016 |
S | 153 | M153T | aTG | aCA | 1 | 8 | P.1 | 0.000016 |
S | 153 | M153D | ATG | GAT | 7 | 7 | All | 0.000001 |
S | 153 | M153del | ATG | --- | 7 | 7 | AY.102 | 0.000186 |
S | 153 | M153I | atG | atT | 7 | 7 | AY.119 | 0.000247 |
S | 153 | M153I | atG | atA | 5 | 7 | AY.14 | 0.00044 |
S | 153 | M153I | atG | atT | 2 | 7 | AY.14 | 0.000176 |
S | 153 | M153R | aTg | aGg | 7 | 7 | AY.3 | 0.00007 |
S | 153 | M153L | Atg | Ttg | 7 | 7 | AY.37 | 0.002212 |
S | 153 | M153V | Atg | Gtg | 7 | 7 | AY.43 | 0.000031 |
S | 153 | M153T | aTg | aCg | 7 | 7 | AY.47 | 0.000218 |
S | 153 | M153I | atG | atT | 7 | 7 | AY.7 | 0.001372 |
S | 153 | M153I | atG | atT | 6 | 7 | AY.79 | 0.007264 |
S | 153 | M153I | atG | atA | 1 | 7 | AY.79 | 0.001211 |
S | 153 | M153T | aTg | aCg | 7 | 7 | AY.9.1 | 0.000586 |
S | 153 | M153I | atG | atT | 7 | 7 | AY.9.2 | 0.000257 |
S | 153 | M153I | atG | atT | 7 | 7 | B.1.1.50 | 0.004752 |
S | 153 | M153I | atG | atT | 7 | 7 | B.1.177.12 | 0.001062 |
S | 153 | M153I | atG | atT | 7 | 7 | B.1.177.60 | 0.001529 |
S | 153 | M153T | aTg | aCg | 7 | 7 | B.1.429 | 0.000165 |
S | 153 | M153I | atG | atT | 6 | 7 | C.37 | 0.000696 |
S | 153 | M153I | atG | atA | 1 | 7 | C.37 | 0.000116 |
S | 153 | M153N | aTG | aAT | 7 | 7 | P.1 | 0.00011 |
S | 153 | M153T | aTg | aCg | 6 | 6 | AL.1 | 0.077922 |
S | 153 | M153E | ATg | GAg | 6 | 6 | All | 0.000001 |
S | 153 | M153V | Atg | Gtg | 6 | 6 | AY.25 | 0.000036 |
S | 153 | M153del | ATG | --- | 6 | 6 | AY.3 | 0.00006 |
S | 153 | M153V | Atg | Gtg | 6 | 6 | AY.39 | 0.000148 |
S | 153 | M153I | atG | atT | 6 | 6 | AY.59 | 0.003178 |
S | 153 | M153V | Atg | Gtg | 6 | 6 | AY.6 | 0.000247 |
S | 153 | M153I | atG | atT | 6 | 6 | AY.62 | 0.002614 |
S | 153 | M153I | atG | atT | 6 | 6 | AY.88 | 0.005305 |
S | 153 | M153I | atG | atT | 6 | 6 | B.1.1.306 | 0.00263 |
S | 153 | M153T | aTg | aCg | 6 | 6 | B.1.1.51 | 0.010309 |
S | 153 | M153I | atG | atA | 5 | 6 | B.1.422 | 0.004062 |
S | 153 | M153I | atG | atT | 1 | 6 | B.1.422 | 0.000812 |
S | 153 | M153Y | ATG | TAT | 6 | 6 | P.1 | 0.000095 |
S | 153 | M153X | ATG | TAA | 3 | 6 | P.1 | 0.000047 |
S | 153 | M153X | ATg | TAg | 3 | 6 | P.1 | 0.000047 |
S | 153 | M153I | atG | atT | 6 | 6 | P.2 | 0.00112 |
S | 153 | M153I | atG | atT | 5 | 6 | Q.8 | 0.000825 |
S | 153 | M153I | atG | atC | 1 | 6 | Q.8 | 0.000165 |
S | 153 | M153T | aTg | aCg | 5 | 5 | A.2.5 | 0.002495 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | AY.102 | 0.000133 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.113 | 0.000712 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | AY.119 | 0.000177 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.19 | 0.005701 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | AY.20 | 0.000194 |
S | 153 | M153R | aTg | aGg | 5 | 5 | AY.25 | 0.00003 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | AY.29 | 0.000079 |
S | 153 | M153T | aTg | aCg | 5 | 5 | AY.3 | 0.00005 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.32 | 0.002662 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.36 | 0.000741 |
S | 153 | M153del | ATG | --- | 5 | 5 | AY.4.5 | 0.000537 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | AY.47 | 0.000156 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.7.1 | 0.000564 |
S | 153 | M153I | atG | atT | 5 | 5 | AY.70 | 0.001043 |
S | 153 | M153I | atG | atT | 4 | 5 | B | 0.000511 |
S | 153 | M153I | atG | atA | 1 | 5 | B | 0.000128 |
S | 153 | M153del | ATG | --- | 5 | 5 | B.1.1 | 0.000091 |
S | 153 | M153I | atG | atT | 5 | 5 | B.1.1.25 | 0.002843 |
S | 153 | M153I | atG | atT | 5 | 5 | B.1.1.28 | 0.001556 |
S | 153 | M153I | atG | atT | 5 | 5 | B.1.1.391 | 0.042735 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.1.398 | 0.016129 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.1.446 | 0.384615 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.1.452 | 0.555556 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.1.519 | 0.000199 |
S | 153 | M153I | atG | atT | 5 | 5 | B.1.177.56 | 0.003338 |
S | 153 | M153I | atG | atT | 5 | 5 | B.1.177.62 | 0.005959 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.210 | 0.010661 |
S | 153 | M153I | atG | atT | 4 | 5 | B.1.243 | 0.000278 |
S | 153 | M153I | atG | atC | 1 | 5 | B.1.243 | 0.00007 |
S | 153 | M153T | aTg | aCg | 5 | 5 | B.1.551 | 0.006452 |
S | 153 | M153V | Atg | Gtg | 5 | 5 | P.1 | 0.000079 |
S | 153 | M153T | aTg | aCg | 5 | 5 | P.5 | 0.068493 |
S | 153 | M153T | aTg | aCg | 5 | 5 | Q.8 | 0.000825 |
S | 153 | M153W | ATg | TGg | 4 | 4 | All | 0.000001 |
S | 153 | M153I | atG | atT | 4 | 4 | AY.108 | 0.00441 |
S | 153 | M153I | atG | atT | 4 | 4 | AY.12 | 0.001264 |
S | 153 | M153L | Atg | Ctg | 4 | 4 | AY.3 | 0.00004 |
S | 153 | M153T | aTg | aCg | 4 | 4 | AY.39 | 0.000099 |
S | 153 | M153I | atG | atT | 3 | 4 | AY.46.2 | 0.001906 |
S | 153 | M153I | atG | atC | 1 | 4 | AY.46.2 | 0.000635 |
S | 153 | M153I | atG | atT | 4 | 4 | AY.63 | 0.001547 |
S | 153 | M153I | atG | atT | 4 | 4 | AY.9 | 0.00027 |
S | 153 | M153T | aTg | aCg | 4 | 4 | B.1.1.161 | 0.014134 |
S | 153 | M153T | aTg | aCg | 4 | 4 | B.1.1.37 | 0.000771 |
S | 153 | M153T | aTg | aCg | 4 | 4 | B.1.1.370 | 0.050633 |
S | 153 | M153R | aTg | aGg | 4 | 4 | B.1.1.7 | 0.000004 |
S | 153 | M153I | atG | atT | 4 | 4 | B.1.139 | 0.002933 |
S | 153 | M153V | Atg | Gtg | 3 | 4 | B.1.177 | 0.00004 |
S | 153 | M153V | AtG | GtT | 1 | 4 | B.1.177 | 0.000013 |
S | 153 | M153I | atG | atT | 4 | 4 | B.1.177.5 | 0.004969 |
S | 153 | M153I | atG | atA | 2 | 4 | B.1.177.86 | 0.000367 |
S | 153 | M153I | atG | atC | 1 | 4 | B.1.177.86 | 0.000183 |
S | 153 | M153I | atG | atT | 1 | 4 | B.1.177.86 | 0.000183 |
S | 153 | M153I | atG | atT | 4 | 4 | B.1.234 | 0.000528 |
S | 153 | M153I | atG | atT | 4 | 4 | B.1.36.36 | 0.002408 |
S | 153 | M153I | atG | atT | 4 | 4 | B.1.413 | 0.017021 |
S | 153 | M153T | aTg | aCg | 4 | 4 | B.1.433 | 0.01278 |
S | 153 | M153V | Atg | Gtg | 4 | 4 | B.1.580 | 0.01626 |
S | 153 | M153T | aTg | aCg | 4 | 4 | B.1.609 | 0.001918 |
S | 153 | M153L | Atg | Ttg | 4 | 4 | B.1.617.1 | 0.000516 |
S | 153 | M153V | Atg | Gtg | 3 | 4 | B.1.637 | 0.000219 |
S | 153 | M153V | AtG | GtT | 1 | 4 | B.1.637 | 0.000073 |
S | 153 | M153I | atG | atC | 2 | 4 | B.40 | 0.000729 |
S | 153 | M153I | atG | atT | 2 | 4 | B.40 | 0.000729 |
S | 153 | M153L | Atg | Ctg | 4 | 4 | C.37 | 0.000464 |
S | 153 | M153T | aTg | aCg | 4 | 4 | Q.1 | 0.000505 |
S | 153 | M153I | atG | atT | 2 | 3 | A | 0.000774 |
S | 153 | M153I | atG | atA | 1 | 3 | A | 0.000387 |
S | 153 | M153I | atG | atT | 3 | 3 | AY.10 | 0.00159 |
S | 153 | M153T | aTg | aCg | 3 | 3 | AY.119 | 0.000106 |
S | 153 | M153I | atG | atT | 1 | 3 | AY.3.1 | 0.000085 |
S | 153 | M153I | atG | atA | 1 | 3 | AY.3.1 | 0.000085 |
S | 153 | M153I | atG | atC | 1 | 3 | AY.3.1 | 0.000085 |
S | 153 | M153T | aTg | aCg | 3 | 3 | AY.33 | 0.0002 |
S | 153 | M153I | atG | atT | 3 | 3 | AY.34.1 | 0.00153 |
S | 153 | M153T | aTg | aCg | 3 | 3 | AY.4.2 | 0.000065 |
S | 153 | M153del | ATG | --- | 3 | 3 | AY.4.2 | 0.000065 |
S | 153 | M153del | ATG | --- | 3 | 3 | AY.42 | 0.000121 |
S | 153 | M153T | aTg | aCg | 3 | 3 | AY.43 | 0.000013 |
S | 153 | M153R | aTg | aGg | 3 | 3 | AY.43 | 0.000013 |
S | 153 | M153I | atG | atT | 3 | 3 | AY.71 | 0.001425 |
S | 153 | M153I | atG | atT | 3 | 3 | AY.82 | 0.004071 |
S | 153 | M153V | Atg | Gtg | 3 | 3 | AY.83 | 0.005172 |
S | 153 | M153V | Atg | Gtg | 3 | 3 | AY.9.1 | 0.000251 |
S | 153 | M153L | Atg | Ttg | 2 | 3 | B.1 | 0.000018 |
S | 153 | M153L | Atg | Ctg | 1 | 3 | B.1 | 0.000009 |
S | 153 | M153I | atG | atT | 2 | 3 | B.1.1.1 | 0.000653 |
S | 153 | M153I | atG | atA | 1 | 3 | B.1.1.1 | 0.000327 |
S | 153 | M153I | atG | atT | 3 | 3 | B.1.1.12 | 0.022388 |
S | 153 | M153I | atG | atC | 3 | 3 | B.1.1.153 | 0.003286 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.1.253 | 0.007519 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.1.31 | 0.2 |
S | 153 | M153I | atG | atT | 3 | 3 | B.1.1.416 | 0.002715 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.1.54 | 0.009063 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.124 | 0.023438 |
S | 153 | M153I | atG | atT | 3 | 3 | B.1.177.14 | 0.018293 |
S | 153 | M153I | atG | atT | 3 | 3 | B.1.177.9 | 0.003995 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.22 | 0.003953 |
S | 153 | M153I | atG | atT | 2 | 3 | B.1.221 | 0.000142 |
S | 153 | M153I | atG | atA | 1 | 3 | B.1.221 | 0.000071 |
S | 153 | M153K | aTg | aAg | 3 | 3 | B.1.351 | 0.000089 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.356 | 0.005181 |
S | 153 | M153I | atG | atT | 3 | 3 | B.1.389 | 0.003006 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.6 | 0.051724 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.634 | 0.010274 |
S | 153 | M153T | aTg | aCg | 3 | 3 | B.1.637 | 0.000219 |
S | 153 | M153I | atG | atT | 3 | 3 | L.3 | 0.010638 |
S | 153 | M153T | aTg | aCg | 3 | 3 | N.3 | 0.017442 |
S | 153 | M153I | atG | atT | 2 | 3 | P.1.14 | 0.000096 |
S | 153 | M153I | atG | atA | 1 | 3 | P.1.14 | 0.000048 |
S | 153 | M153del | ATG | --- | 3 | 3 | P.1.15 | 0.000697 |
S | 153 | M153I | atG | atT | 1 | 3 | P.1.15 | 0.000232 |
S | 153 | M153I | atG | atC | 1 | 3 | P.1.15 | 0.000232 |
S | 153 | M153I | atG | atA | 1 | 3 | P.1.15 | 0.000232 |
S | 153 | M153I | atG | atT | 3 | 3 | P.1.17 | 0.000485 |
S | 153 | M153I | atG | atT | 3 | 3 | P.1.7 | 0.000958 |
S | 153 | M153T | aTg | aCg | 2 | 2 | 0.111111 | |
S | 153 | M153I | atG | atT | 2 | 2 | A.23.1 | 0.001408 |
S | 153 | M153T | aTg | aCg | 2 | 2 | AB.1 | 0.016393 |
S | 153 | M153Q | ATg | CAg | 2 | 2 | All | 0 |
S | 153 | M153del2 | ATg | --g | 1 | 2 | All | 0 |
S | 153 | M153del2 | aTG | a-- | 1 | 2 | All | 0 |
S | 153 | M153S | ATG | TCT | 1 | 2 | All | 0 |
S | 153 | M153S | ATG | TCA | 1 | 2 | All | 0 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | AY.10 | 0.00106 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | AY.100 | 0.000092 |
S | 153 | M153del1 | Atg | -tg | 1 | 2 | AY.102 | 0.000027 |
S | 153 | M153del1 | AtG | Ct- | 1 | 2 | AY.102 | 0.000027 |
S | 153 | M153L | Atg | Ttg | 2 | 2 | AY.103 | 0.000012 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.107 | 0.000932 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.108 | 0.002205 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.116 | 0.000574 |
S | 153 | M153I | atG | atC | 1 | 2 | AY.16.1 | 0.00047 |
S | 153 | M153I | atG | atT | 1 | 2 | AY.16.1 | 0.00047 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.2 | 0.000712 |
S | 153 | M153L | Atg | Ctg | 1 | 2 | AY.25 | 0.000006 |
S | 153 | M153L | Atg | Ttg | 1 | 2 | AY.25 | 0.000006 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | AY.26 | 0.000057 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.26 | 0.000057 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.28 | 0.003781 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.29 | 0.000032 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.30 | 0.000791 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.33 | 0.000134 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.34.1 | 0.00102 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.38 | 0.000999 |
S | 153 | M153L | Atg | Ttg | 2 | 2 | AY.39 | 0.000049 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.39.2 | 0.003082 |
S | 153 | M153K | aTg | aAg | 2 | 2 | AY.4 | 0.000003 |
S | 153 | M153L | Atg | Ctg | 2 | 2 | AY.4 | 0.000003 |
S | 153 | M153I | atG | atA | 2 | 2 | AY.4.2.1 | 0.000298 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.40 | 0.001929 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.5 | 0.000041 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.53 | 0.000575 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.58 | 0.001815 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.60 | 0.001876 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.65 | 0.001066 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.69 | 0.000373 |
S | 153 | M153T | aTg | aCg | 2 | 2 | AY.7.1 | 0.000225 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.9 | 0.000135 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.91 | 0.001461 |
S | 153 | M153I | atG | atA | 1 | 2 | AY.92 | 0.000287 |
S | 153 | M153I | atG | atT | 1 | 2 | AY.92 | 0.000287 |
S | 153 | M153I | atG | atT | 2 | 2 | AY.94 | 0.000885 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.98.1 | 0.000097 |
S | 153 | M153L | Atg | Ttg | 1 | 2 | AY.99 | 0.001049 |
S | 153 | M153L | Atg | Ctg | 1 | 2 | AY.99 | 0.001049 |
S | 153 | M153del | ATG | --- | 2 | 2 | AY.99.1 | 0.003106 |
S | 153 | M153del | ATG | --- | 2 | 2 | AZ.5 | 0.007018 |
S | 153 | M153del | ATG | --- | 2 | 2 | B | 0.000256 |
S | 153 | M153D | ATG | GAT | 2 | 2 | B.1 | 0.000018 |
S | 153 | M153E | ATg | GAg | 2 | 2 | B.1 | 0.000018 |
S | 153 | M153N | aTG | aAT | 2 | 2 | B.1 | 0.000018 |
S | 153 | M153K | aTg | aAg | 2 | 2 | B.1 | 0.000018 |
S | 153 | M153K | aTg | aAg | 2 | 2 | B.1.1 | 0.000036 |
S | 153 | M153D | ATG | GAT | 2 | 2 | B.1.1 | 0.000036 |
S | 153 | M153E | ATg | GAg | 2 | 2 | B.1.1 | 0.000036 |
S | 153 | M153N | aTG | aAT | 2 | 2 | B.1.1 | 0.000036 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.116 | 0.125 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.117 | 0.019417 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.148 | 0.017544 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.157 | 0.001826 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.170 | 0.002494 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.216 | 0.001781 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.220 | 0.003717 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.274 | 0.010101 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.277 | 0.001517 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.284 | 0.000215 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | B.1.1.284 | 0.000215 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.304 | 0.005618 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.1.315 | 0.016949 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.317 | 0.000823 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.318 | 0.000604 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.33 | 0.000842 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.33 | 0.000842 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.355 | 0.030769 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.369 | 0.000892 |
S | 153 | M153I | atG | atT | 1 | 2 | B.1.1.37 | 0.000193 |
S | 153 | M153I | atG | atA | 1 | 2 | B.1.1.37 | 0.000193 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.453 | 0.016949 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | B.1.1.519 | 0.000079 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.1.523 | 0.003125 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.1.528 | 0.009615 |
S | 153 | M153W | ATg | TGg | 2 | 2 | B.1.1.7 | 0.000002 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.1.71 | 0.012121 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.143 | 0.042553 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.157 | 0.00597 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.160 | 0.000062 |
S | 153 | M153L | Atg | Ctg | 2 | 2 | B.1.177 | 0.000026 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.177.4 | 0.000422 |
S | 153 | M153L | Atg | Ttg | 2 | 2 | B.1.177.42 | 0.001789 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.177.44 | 0.001038 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.177.60 | 0.000437 |
S | 153 | M153K | aTg | aAg | 2 | 2 | B.1.2 | 0.000018 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.2 | 0.000018 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.232 | 0.001075 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.258.17 | 0.000208 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.289 | 0.005319 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.298 | 0.004228 |
S | 153 | M153I | atG | atA | 2 | 2 | B.1.302 | 0.026667 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.311 | 0.000549 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.36.18 | 0.00084 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.36.29 | 0.001035 |
S | 153 | M153V | Atg | Gtg | 2 | 2 | B.1.36.29 | 0.001035 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.36.35 | 0.005208 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.360 | 0.025316 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.362 | 0.003082 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.366 | 0.009756 |
S | 153 | M153I | atG | atA | 1 | 2 | B.1.369 | 0.000285 |
S | 153 | M153I | atG | atT | 1 | 2 | B.1.369 | 0.000285 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.388 | 0.181818 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.404 | 0.002604 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.426 | 0.002018 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.428 | 0.002041 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.441 | 0.019231 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.466.2 | 0.000782 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.499 | 0.002101 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.521 | 0.00995 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.558 | 0.009132 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.560 | 0.009259 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.565 | 0.001621 |
S | 153 | M153I | atG | atT | 1 | 2 | B.1.576 | 0.000907 |
S | 153 | M153I | atG | atA | 1 | 2 | B.1.576 | 0.000907 |
S | 153 | M153del | ATG | --- | 2 | 2 | B.1.596 | 0.000174 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.596 | 0.000174 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.609 | 0.000959 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.612 | 0.005305 |
S | 153 | M153K | aTg | aAg | 2 | 2 | B.1.617.2 | 0.000008 |
S | 153 | M153L | Atg | Ttg | 1 | 2 | B.1.617.2 | 0.000004 |
S | 153 | M153L | Atg | Ctg | 1 | 2 | B.1.617.2 | 0.000004 |
S | 153 | M153I | atG | atT | 2 | 2 | B.1.618 | 0.008065 |
S | 153 | M153T | aTg | aCg | 2 | 2 | B.1.623 | 0.001073 |
S | 153 | M153I | atG | atT | 2 | 2 | B.6 | 0.00182 |
S | 153 | M153S | ATG | TCT | 1 | 2 | P.1 | 0.000016 |
S | 153 | M153S | ATG | TCA | 1 | 2 | P.1 | 0.000016 |
S | 153 | M153I | atG | atT | 2 | 2 | P.1.10 | 0.000539 |
S | 153 | M153I | atG | atT | 2 | 2 | P.1.12 | 0.000968 |
S | 153 | M153T | aTg | aCg | 2 | 2 | P.1.15 | 0.000465 |
S | 153 | M153T | aTg | aCg | 2 | 2 | P.6 | 0.006289 |
S | 153 | M153I | atG | atT | 2 | 2 | P.6 | 0.006289 |
S | 153 | M153I | atG | atC | 1 | 2 | Q.3 | 0.000145 |
S | 153 | M153I | atG | atT | 1 | 2 | Q.3 | 0.000145 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | 0.055556 | |
S | 153 | M153del | ATG | --- | 1 | 1 | A | 0.000387 |
S | 153 | M153T | aTg | aCg | 1 | 1 | A.1 | 0.000282 |
S | 153 | M153I | atG | atA | 1 | 1 | A.2 | 0.000662 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | A.2.4 | 0.003367 |
S | 153 | M153I | atG | atT | 1 | 1 | A.2.5.2 | 0.001572 |
S | 153 | M153T | aTg | aCg | 1 | 1 | A.2.5.2 | 0.001572 |
S | 153 | M153I | atG | atT | 1 | 1 | A.23 | 0.010526 |
S | 153 | M153I | atG | atT | 1 | 1 | AD.2 | 0.000219 |
S | 153 | M153G | ATG | GGT | 1 | 1 | All | 0 |
S | 153 | M153A | ATg | GCg | 1 | 1 | All | 0 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.1 | 0.000396 |
S | 153 | M153del1 | Atg | -tg | 1 | 1 | AY.100 | 0.000046 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.101 | 0.00049 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | AY.102 | 0.000027 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.105 | 0.000643 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.110 | 0.000113 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.111 | 0.000183 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | AY.113 | 0.000142 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.114 | 0.000231 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | AY.117 | 0.000085 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.118 | 0.000063 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.118 | 0.000063 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.120 | 0.000037 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.120.2 | 0.001285 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.121 | 0.000135 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.121 | 0.000135 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.13 | 0.000161 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.16 | 0.00038 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.16.1 | 0.00047 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.18 | 0.010101 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | AY.20 | 0.000039 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.20 | 0.000039 |
S | 153 | M153K | aTg | aAg | 1 | 1 | AY.23 | 0.00007 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.23 | 0.00007 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.23 | 0.00007 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.23.1 | 0.000417 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.23.1 | 0.000417 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.23.1 | 0.000417 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.24 | 0.000431 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.26 | 0.000028 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.26 | 0.000028 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.27 | 0.000065 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.27 | 0.000065 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.30 | 0.000396 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.30 | 0.000396 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.32 | 0.000532 |
S | 153 | M153del1 | ATG | -NN | 1 | 1 | AY.34.1 | 0.00051 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.35 | 0.000233 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.36 | 0.000148 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.37 | 0.000316 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.37 | 0.000316 |
S | 153 | M153Q | ATg | CAg | 1 | 1 | AY.4 | 0.000002 |
S | 153 | M153R | aTg | aGg | 1 | 1 | AY.4 | 0.000002 |
S | 153 | M153N | aTG | aAT | 1 | 1 | AY.4 | 0.000002 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.4.1 | 0.000737 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.4.2 | 0.000022 |
S | 153 | M153del1 | Atg | -tg | 1 | 1 | AY.4.2 | 0.000022 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.4.4 | 0.000409 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.4.5 | 0.000107 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.4.5 | 0.000107 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.41 | 0.000294 |
S | 153 | M153del2 | ATg | --g | 1 | 1 | AY.43 | 0.000004 |
S | 153 | M153R | aTg | aGg | 1 | 1 | AY.44 | 0.000006 |
S | 153 | M153G | ATG | GGT | 1 | 1 | AY.44 | 0.000006 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.44 | 0.000006 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.45 | 0.000122 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.46.3 | 0.000934 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.46.6 | 0.000072 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.48 | 0.000465 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.5 | 0.000021 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.5.3 | 0.000337 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.5.3 | 0.000337 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.5.4 | 0.000277 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.52 | 0.000814 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.54 | 0.000095 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.60 | 0.000938 |
S | 153 | M153V | AtG | GtA | 1 | 1 | AY.62 | 0.000436 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.64 | 0.000595 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.65 | 0.000533 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.66 | 0.00107 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.67 | 0.000464 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.68 | 0.000274 |
S | 153 | M153K | aTg | aAg | 1 | 1 | AY.7 | 0.000196 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.7.2 | 0.000559 |
S | 153 | M153K | aTg | aAg | 1 | 1 | AY.70 | 0.000209 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.71 | 0.000475 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.72 | 0.001361 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.73 | 0.000665 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.74 | 0.000116 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.75 | 0.000056 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.78 | 0.001541 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.84 | 0.000437 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.85 | 0.000427 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.86 | 0.00083 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.89 | 0.004902 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | AY.9 | 0.000068 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | AY.9.2 | 0.000037 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.92 | 0.000287 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.93 | 0.000273 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.95 | 0.000761 |
S | 153 | M153I | atG | atT | 1 | 1 | AY.95 | 0.000761 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.98 | 0.000079 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.98 | 0.000079 |
S | 153 | M153T | aTg | aCg | 1 | 1 | AY.99 | 0.001049 |
S | 153 | M153Q | ATg | CAg | 1 | 1 | AY.99 | 0.001049 |
S | 153 | M153X | ATg | TAg | 1 | 1 | AY.99 | 0.001049 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.99 | 0.001049 |
S | 153 | M153K | aTg | aAg | 1 | 1 | AY.99 | 0.001049 |
S | 153 | M153del | ATG | --- | 1 | 1 | AY.99.2 | 0.000092 |
S | 153 | M153del | ATG | --- | 1 | 1 | AZ.2 | 0.000821 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1 | 0.000009 |
S | 153 | M153F | AtG | TtT | 1 | 1 | B.1 | 0.000009 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.1 | 0.000018 |
S | 153 | M153A | ATg | GCg | 1 | 1 | B.1.1 | 0.000018 |
S | 153 | M153F | AtG | TtT | 1 | 1 | B.1.1 | 0.000018 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.129 | 0.009174 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.133 | 0.008475 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.1.139 | 0.022727 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.1.176 | 0.000439 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.189 | 0.001513 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.192 | 0.002309 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.192 | 0.002309 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.194 | 0.00495 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.194 | 0.00495 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.198 | 0.001468 |
S | 153 | M153T | aTG | aCC | 1 | 1 | B.1.1.207 | 0.001182 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.214 | 0.000055 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.214 | 0.000055 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.1.214 | 0.000055 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.1.214 | 0.000055 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.216 | 0.00089 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.220 | 0.001859 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.222 | 0.000204 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.222 | 0.000204 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.228 | 0.003049 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.232 | 0.001815 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.236 | 0.006897 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.1.25 | 0.000569 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.261 | 0.008621 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.263 | 0.001558 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.265 | 0.003155 |
S | 153 | M153W | ATg | TGg | 1 | 1 | B.1.1.269 | 0.001353 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.1.269 | 0.001353 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.1.269 | 0.001353 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.269 | 0.001353 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.272 | 0.005208 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.279 | 0.001121 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.282 | 0.011628 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.1.284 | 0.000107 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.294 | 0.001266 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.1.294 | 0.001266 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.1.298 | 0.000862 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.300 | 0.010753 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.306 | 0.000438 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.1.311 | 0.000358 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.1.311 | 0.000358 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.311 | 0.000358 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.312 | 0.001912 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.316 | 0.000925 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.318 | 0.000302 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.325 | 0.025641 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.1.372 | 0.000689 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.381 | 0.04 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.39 | 0.00051 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.398 | 0.003226 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.404 | 0.015873 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.407 | 0.041667 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.413 | 0.006897 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.419 | 0.007407 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.432 | 0.001266 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.434 | 0.000349 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.437 | 0.010417 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.442 | 0.018519 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.464 | 0.001473 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.485 | 0.016667 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.525 | 0.005464 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.526 | 0.003546 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.53 | 0.013699 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.56 | 0.017857 |
S | 153 | M153del2 | aTG | a-- | 1 | 1 | B.1.1.7 | 0.000001 |
S | 153 | M153del1 | Atg | -tg | 1 | 1 | B.1.1.7 | 0.000001 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.1.70 | 0.000341 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.70 | 0.000341 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.74 | 0.00431 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.1.8 | 0.003584 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.89 | 0.006061 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.1.99 | 0.02381 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.119 | 0.010526 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.126 | 0.001276 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.140 | 0.018868 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.160 | 0.000031 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.160 | 0.000031 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.160.14 | 0.002119 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.160.23 | 0.004831 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.160.8 | 0.001289 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.162 | 0.005025 |
S | 153 | M153D | ATG | GAT | 1 | 1 | B.1.177 | 0.000013 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.177 | 0.000013 |
S | 153 | M153K | aTg | aAg | 1 | 1 | B.1.177 | 0.000013 |
S | 153 | M153N | aTG | aAT | 1 | 1 | B.1.177 | 0.000013 |
S | 153 | M153E | ATg | GAg | 1 | 1 | B.1.177 | 0.000013 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.177.10 | 0.000878 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.177.12 | 0.000152 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.177.16 | 0.000664 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.177.16 | 0.000664 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.177.20 | 0.001517 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.177.33 | 0.001645 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.177.4 | 0.000211 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.177.44 | 0.000519 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.177.46 | 0.000918 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.177.54 | 0.000606 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.177.6 | 0.000977 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.177.62 | 0.001192 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.177.73 | 0.000566 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.177.86 | 0.000183 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.177.87 | 0.000728 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.189 | 0.004292 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.214 | 0.003663 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.214.3 | 0.007143 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.221 | 0.000071 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.221.1 | 0.002907 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.222 | 0.001692 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.222 | 0.001692 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.222 | 0.001692 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.240 | 0.000216 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.240 | 0.000216 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.243 | 0.00007 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.250 | 0.014493 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.258 | 0.000067 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.258 | 0.000067 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.258.11 | 0.000396 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.258.11 | 0.000396 |
S | 153 | M153W | ATg | TGg | 1 | 1 | B.1.258.11 | 0.000396 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.279 | 0.000514 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.301 | 0.005917 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.302 | 0.013333 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.319 | 0.003049 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.323 | 0.020833 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.324 | 0.001605 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.340 | 0.004292 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.341 | 0.022727 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.346 | 0.001311 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.349 | 0.000715 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.351 | 0.00003 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.351.2 | 0.000303 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.351.5 | 0.0006 |
S | 153 | M153K | aTg | aAg | 1 | 1 | B.1.36 | 0.000146 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.36.1 | 0.00114 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.36.17 | 0.000494 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.36.22 | 0.001208 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.36.29 | 0.000517 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.361 | 0.001289 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.367 | 0.000792 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.367 | 0.000792 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.375 | 0.00082 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.39 | 0.003906 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.396 | 0.000706 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.396 | 0.000706 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.398 | 0.002976 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.399 | 0.001934 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.400 | 0.000429 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.400 | 0.000429 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.413 | 0.004255 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.415 | 0.014286 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.417 | 0.028571 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.427 | 0.00005 |
S | 153 | M153K | aTg | aAg | 1 | 1 | B.1.427 | 0.00005 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.1.429 | 0.000024 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.443 | 0.004673 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.452 | 0.013699 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.459 | 0.004082 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.465 | 0.003802 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.468 | 0.005714 |
S | 153 | M153I | atG | atC | 1 | 1 | B.1.474 | 0.001901 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.480 | 0.002488 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.497 | 0.000315 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.1.499 | 0.00105 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.503 | 0.002488 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.525 | 0.000113 |
S | 153 | M153del1 | ATg | -Cg | 1 | 1 | B.1.526 | 0.000024 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.526 | 0.000024 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.526 | 0.000024 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.526 | 0.000024 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.533 | 0.009615 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.533 | 0.009615 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.537 | 0.02 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.540 | 0.009709 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.551 | 0.00129 |
S | 153 | M153I | atG | atA | 1 | 1 | B.1.561 | 0.000397 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.564.1 | 0.001577 |
S | 153 | M153F | AtG | TtT | 1 | 1 | B.1.574 | 0.002151 |
S | 153 | M153N | aTG | aAT | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153L | AtG | TtA | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153Y | ATG | TAT | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153X | ATG | TAA | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153F | AtG | TtT | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153K | aTG | aAA | 1 | 1 | B.1.576 | 0.000907 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.578 | 0.017857 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.582 | 0.000491 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.1.585 | 0.027778 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.596 | 0.000087 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | B.1.596 | 0.000087 |
S | 153 | M153V | AtG | GtA | 1 | 1 | B.1.599 | 0.00365 |
S | 153 | M153D | ATG | GAT | 1 | 1 | B.1.617.1 | 0.000129 |
S | 153 | M153K | aTg | aAg | 1 | 1 | B.1.617.1 | 0.000129 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.617.1 | 0.000129 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
S | 153 | M153del1 | aTG | aC- | 1 | 1 | B.1.617.2 | 0.000004 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.617.3 | 0.002985 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.618 | 0.004032 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.619.1 | 0.000641 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.620 | 0.000946 |
S | 153 | M153del | ATG | --- | 1 | 1 | B.1.620 | 0.000946 |
S | 153 | M153L | Atg | Ctg | 1 | 1 | B.1.621 | 0.000089 |
S | 153 | M153I | atG | atT | 1 | 1 | B.1.621.1 | 0.000506 |
S | 153 | M153K | aTg | aAg | 1 | 1 | B.1.637 | 0.000073 |
S | 153 | M153D | ATG | GAT | 1 | 1 | B.1.637 | 0.000073 |
S | 153 | M153E | ATg | GAg | 1 | 1 | B.1.637 | 0.000073 |
S | 153 | M153N | aTG | aAT | 1 | 1 | B.1.637 | 0.000073 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.8 | 0.001972 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.1.81 | 0.021277 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.29 | 0.003509 |
S | 153 | M153I | atG | atT | 1 | 1 | B.3 | 0.000831 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.35 | 0.007812 |
S | 153 | M153I | atG | atT | 1 | 1 | B.4 | 0.002208 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | B.4.5 | 0.011905 |
S | 153 | M153T | aTg | aCg | 1 | 1 | B.6 | 0.00091 |
S | 153 | M153R | aTg | aGg | 1 | 1 | B.6 | 0.00091 |
S | 153 | M153I | atG | atA | 1 | 1 | B.6.6 | 0.000889 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | B.6.6 | 0.000889 |
S | 153 | M153I | atG | atT | 1 | 1 | C.26 | 0.007353 |
S | 153 | M153I | atG | atA | 1 | 1 | C.30 | 0.001727 |
S | 153 | M153I | atG | atT | 1 | 1 | C.35 | 0.000774 |
S | 153 | M153del1 | Atg | -tg | 1 | 1 | C.36 | 0.000911 |
S | 153 | M153I | atG | atT | 1 | 1 | C.36.1 | 0.004149 |
S | 153 | M153I | atG | atA | 1 | 1 | C.36.3 | 0.000567 |
S | 153 | M153T | aTg | aCg | 1 | 1 | C.37 | 0.000116 |
S | 153 | M153I | atG | atA | 1 | 1 | N.5 | 0.001767 |
S | 153 | M153T | aTg | aCg | 1 | 1 | N.9 | 0.005952 |
S | 153 | M153del | ATG | --- | 1 | 1 | P.1 | 0.000016 |
S | 153 | M153T | aTg | aCg | 1 | 1 | P.1.1 | 0.000318 |
S | 153 | M153I | atG | atA | 1 | 1 | P.1.4 | 0.000977 |
S | 153 | M153L | Atg | Ttg | 1 | 1 | P.2 | 0.000187 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | Q.1 | 0.000126 |
S | 153 | M153I | atG | atT | 1 | 1 | Q.1 | 0.000126 |
S | 153 | M153del | ATG | --- | 1 | 1 | Q.2 | 0.000613 |
S | 153 | M153K | aTg | aAg | 1 | 1 | R.1 | 0.00009 |
S | 153 | M153I | atG | atT | 1 | 1 | R.1 | 0.00009 |
S | 153 | M153V | Atg | Gtg | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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