CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 145 | Y145H | nonsyn | Tac | Cac | 54598 | 54591 | 0.999872 | 21995-21997 | |
S | 145 | Y145H | nonsyn | TaC | CaT | 54598 | 7 | 0.00012821 | 21995-21997 | |
S | 145 | Y145N | nonsyn | Tac | Aac | 12191 | 12177 | 0.998852 | 21995-21997 | |
S | 145 | Y145N | nonsyn | TaC | AaT | 12191 | 14 | 0.00114839 | 21995-21997 | |
S | 145 | Y145Y | syn | taC | taT | 3147 | 3147 | 1 | 21995-21997 | |
S | 145 | Y145del | del | TAC | --- | 3074 | 3074 | 1 | 21995-21997 | |
S | 145 | Y145D | nonsyn | Tac | Gac | 825 | 809 | 0.980606 | 21995-21997 | |
S | 145 | Y145D | nonsyn | TaC | GaT | 825 | 16 | 0.0193939 | 21995-21997 | |
S | 145 | Y145S | nonsyn | tAC | tCT | 100 | 64 | 0.64 | 21995-21997 | |
S | 145 | Y145S | nonsyn | tAc | tCc | 100 | 35 | 0.35 | 21995-21997 | |
S | 145 | Y145S | nonsyn | tAC | tCA | 100 | 1 | 0.01 | 21995-21997 | |
S | 145 | Y145C | nonsyn | tAC | tGT | 77 | 41 | 0.532468 | 21995-21997 | |
S | 145 | Y145C | nonsyn | tAc | tGc | 77 | 36 | 0.467532 | 21995-21997 | |
S | 145 | Y145del1 | del | Tac | -ac | 43 | 22 | 0.511628 | 21995-21997 | |
S | 145 | Y145del1 | del | taC | ta- | 43 | 7 | 0.162791 | 21995-21997 | |
S | 145 | Y145del1 | del | TAc | -Nc | 43 | 6 | 0.139535 | 21995-21997 | |
S | 145 | Y145del1 | del | TAC | CG- | 43 | 3 | 0.0697674 | 21995-21997 | |
S | 145 | Y145del1 | del | tAc | t-c | 43 | 3 | 0.0697674 | 21995-21997 | |
S | 145 | Y145del1 | del | tAC | t-N | 43 | 1 | 0.0232558 | 21995-21997 | |
S | 145 | Y145del1 | del | TAC | -NN | 43 | 1 | 0.0232558 | 21995-21997 | |
S | 145 | Y145del2 | del | TAC | --A | 30 | 20 | 0.666667 | 21995-21997 | |
S | 145 | Y145del2 | del | TAc | --c | 30 | 7 | 0.233333 | 21995-21997 | |
S | 145 | Y145del2 | del | tAC | t-- | 30 | 2 | 0.0666667 | 21995-21997 | |
S | 145 | Y145del2 | del | TAC | C-- | 30 | 1 | 0.0333333 | 21995-21997 | |
S | 145 | Y145F | nonsyn | tAc | tTc | 18 | 18 | 1 | 21995-21997 | |
S | 145 | Y145T | nonsyn | TAc | ACc | 16 | 9 | 0.5625 | 21995-21997 | |
S | 145 | Y145T | nonsyn | TAC | ACT | 16 | 7 | 0.4375 | 21995-21997 | |
S | 145 | Y145L | nonsyn | tAC | tTA | 13 | 12 | 0.923077 | 21995-21997 | |
S | 145 | Y145X | nonsyn | taC | taA | 13 | 10 | 0.769231 | 21995-21997 | |
S | 145 | Y145X | nonsyn | taC | taG | 13 | 3 | 0.230769 | 21995-21997 | |
S | 145 | Y145L | nonsyn | TAc | CTc | 13 | 1 | 0.0769231 | 21995-21997 | |
S | 145 | Y145K | nonsyn | TaC | AaA | 5 | 5 | 1 | 21995-21997 | |
S | 145 | Y145P | nonsyn | TAc | CCc | 4 | 2 | 0.5 | 21995-21997 | |
S | 145 | Y145P | nonsyn | TAC | CCT | 4 | 2 | 0.5 | 21995-21997 | |
S | 145 | Y145I | nonsyn | TAC | ATT | 2 | 1 | 0.5 | 21995-21997 | |
S | 145 | Y145I | nonsyn | TAc | ATc | 2 | 1 | 0.5 | 21995-21997 | |
S | 145 | Y145Q | nonsyn | TaC | CaG | 2 | 1 | 0.5 | 21995-21997 | |
S | 145 | Y145Q | nonsyn | TaC | CaA | 2 | 1 | 0.5 | 21995-21997 | |
S | 145 | Y145G | nonsyn | TAc | GGc | 1 | 1 | 1 | 21995-21997 | |
S | 145 | Y145E | nonsyn | TaC | GaA | 1 | 1 | 1 | 21995-21997 | |
S | 145 | Y145V | nonsyn | TAc | GTc | 1 | 1 | 1 | 21995-21997 | |
S | 145 | Y145A | nonsyn | TAc | GCc | 1 | 1 | 1 | 21995-21997 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 145 | Y145H | Tac | Cac | 54591 | 54598 | All | 0.010441 |
S | 145 | Y145H | TaC | CaT | 7 | 54598 | All | 0.000001 |
S | 145 | Y145H | Tac | Cac | 45654 | 45656 | AY.4.2 | 0.990175 |
S | 145 | Y145H | TaC | CaT | 2 | 45656 | AY.4.2 | 0.000043 |
S | 145 | Y145N | Tac | Aac | 12177 | 12191 | All | 0.002329 |
S | 145 | Y145N | TaC | AaT | 14 | 12191 | All | 0.000003 |
S | 145 | Y145N | Tac | Aac | 9994 | 10000 | B.1.621 | 0.88466 |
S | 145 | Y145N | TaC | AaT | 6 | 10000 | B.1.621 | 0.000531 |
S | 145 | Y145H | Tac | Cac | 5610 | 5614 | AY.4.2.1 | 0.835816 |
S | 145 | Y145H | TaC | CaT | 4 | 5614 | AY.4.2.1 | 0.000596 |
S | 145 | Y145Y | taC | taT | 3147 | 3147 | All | 0.000602 |
S | 145 | Y145del | TAC | --- | 3074 | 3074 | All | 0.000588 |
S | 145 | Y145del | TAC | --- | 2094 | 2094 | B.1.1.7 | 0.001875 |
S | 145 | Y145N | Tac | Aac | 1739 | 1744 | B.1.621.1 | 0.879616 |
S | 145 | Y145N | TaC | AaT | 5 | 1744 | B.1.621.1 | 0.002529 |
S | 145 | Y145H | Tac | Cac | 1115 | 1115 | AY.4 | 0.001735 |
S | 145 | Y145D | Tac | Gac | 809 | 825 | All | 0.000155 |
S | 145 | Y145D | TaC | GaT | 16 | 825 | All | 0.000003 |
S | 145 | Y145H | Tac | Cac | 804 | 804 | B.1.617.2 | 0.003027 |
S | 145 | Y145H | Tac | Cac | 787 | 787 | B.1.1.7 | 0.000705 |
S | 145 | Y145Y | taC | taT | 557 | 557 | AY.4 | 0.000867 |
S | 145 | Y145D | Tac | Gac | 229 | 229 | AY.4 | 0.000356 |
S | 145 | Y145Y | taC | taT | 209 | 209 | AY.44 | 0.001272 |
S | 145 | Y145del | TAC | --- | 201 | 201 | B.1.618 | 0.810484 |
S | 145 | Y145del | TAC | --- | 189 | 189 | B.1.637 | 0.013811 |
S | 145 | Y145Y | taC | taT | 171 | 171 | B.1.617.2 | 0.000644 |
S | 145 | Y145Y | taC | taT | 167 | 167 | P.1 | 0.002631 |
S | 145 | Y145Y | taC | taT | 125 | 125 | AY.39 | 0.003089 |
S | 145 | Y145Y | taC | taT | 120 | 120 | AY.43 | 0.000532 |
S | 145 | Y145N | Tac | Aac | 113 | 114 | B.1 | 0.001035 |
S | 145 | Y145N | TaC | AaT | 1 | 114 | B.1 | 0.000009 |
S | 145 | Y145Y | taC | taT | 112 | 112 | B.1.2 | 0.000986 |
S | 145 | Y145D | Tac | Gac | 90 | 104 | B.1.1.7 | 0.000081 |
S | 145 | Y145D | TaC | GaT | 14 | 104 | B.1.1.7 | 0.000013 |
S | 145 | Y145S | tAC | tCT | 64 | 100 | All | 0.000012 |
S | 145 | Y145S | tAc | tCc | 35 | 100 | All | 0.000007 |
S | 145 | Y145S | tAC | tCA | 1 | 100 | All | 0 |
S | 145 | Y145del | TAC | --- | 93 | 93 | AY.4 | 0.000145 |
S | 145 | Y145Y | taC | taT | 83 | 83 | AY.25 | 0.000499 |
S | 145 | Y145Y | taC | taT | 82 | 82 | AY.3 | 0.000816 |
S | 145 | Y145Y | taC | taT | 81 | 81 | AY.99.2 | 0.007465 |
S | 145 | Y145Y | taC | taT | 79 | 79 | B.1.568 | 0.087778 |
S | 145 | Y145C | tAC | tGT | 41 | 77 | All | 0.000008 |
S | 145 | Y145C | tAc | tGc | 36 | 77 | All | 0.000007 |
S | 145 | Y145Y | taC | taT | 77 | 77 | B.1.177 | 0.001014 |
S | 145 | Y145S | tAC | tCT | 58 | 77 | B.1.621 | 0.005134 |
S | 145 | Y145S | tAc | tCc | 18 | 77 | B.1.621 | 0.001593 |
S | 145 | Y145S | tAC | tCA | 1 | 77 | B.1.621 | 0.000089 |
S | 145 | Y145Y | taC | taT | 70 | 70 | B.1.177.21 | 0.005353 |
S | 145 | Y145Y | taC | taT | 68 | 68 | AY.103 | 0.000422 |
S | 145 | Y145Y | taC | taT | 60 | 60 | B.1 | 0.00055 |
S | 145 | Y145D | Tac | Gac | 56 | 56 | B.1 | 0.000513 |
S | 145 | Y145H | Tac | Cac | 48 | 48 | AY.33 | 0.003205 |
S | 145 | Y145del | TAC | --- | 46 | 46 | AY.43 | 0.000204 |
S | 145 | Y145D | Tac | Gac | 46 | 46 | B.1.177 | 0.000606 |
S | 145 | Y145del1 | Tac | -ac | 22 | 43 | All | 0.000004 |
S | 145 | Y145del1 | taC | ta- | 7 | 43 | All | 0.000001 |
S | 145 | Y145del1 | TAc | -Nc | 6 | 43 | All | 0.000001 |
S | 145 | Y145del1 | TAC | CG- | 3 | 43 | All | 0.000001 |
S | 145 | Y145del1 | tAc | t-c | 3 | 43 | All | 0.000001 |
S | 145 | Y145del1 | tAC | t-N | 1 | 43 | All | 0 |
S | 145 | Y145del1 | TAC | -NN | 1 | 43 | All | 0 |
S | 145 | Y145H | Tac | Cac | 42 | 42 | B.1.314 | 0.315789 |
S | 145 | Y145Y | taC | taT | 42 | 42 | B.1.526 | 0.000987 |
S | 145 | Y145Y | taC | taT | 41 | 41 | AY.120 | 0.001524 |
S | 145 | Y145H | Tac | Cac | 40 | 40 | AY.43 | 0.000177 |
S | 145 | Y145N | Tac | Aac | 38 | 38 | B.1.1.7 | 0.000034 |
S | 145 | Y145Y | taC | taT | 37 | 37 | AY.100 | 0.001702 |
S | 145 | Y145Y | taC | taT | 37 | 37 | AY.5 | 0.000764 |
S | 145 | Y145Y | taC | taT | 37 | 37 | B.1.497 | 0.011646 |
S | 145 | Y145N | Tac | Aac | 37 | 37 | B.1.623 | 0.01985 |
S | 145 | Y145H | Tac | Cac | 35 | 35 | AY.102 | 0.000928 |
S | 145 | Y145Y | taC | taT | 35 | 35 | AY.102 | 0.000928 |
S | 145 | Y145Y | taC | taT | 34 | 34 | AY.26 | 0.000963 |
S | 145 | Y145Y | taC | taT | 33 | 33 | B.1.160.30 | 0.098214 |
S | 145 | Y145H | Tac | Cac | 33 | 33 | B.1.258 | 0.002196 |
S | 145 | Y145del | TAC | --- | 32 | 32 | Q.8 | 0.005277 |
S | 145 | Y145Y | taC | taT | 31 | 31 | B.1.561 | 0.012306 |
S | 145 | Y145del2 | TAC | --A | 20 | 30 | All | 0.000004 |
S | 145 | Y145del2 | TAc | --c | 7 | 30 | All | 0.000001 |
S | 145 | Y145del2 | tAC | t-- | 2 | 30 | All | 0 |
S | 145 | Y145del2 | TAC | C-- | 1 | 30 | All | 0 |
S | 145 | Y145Y | taC | taT | 30 | 30 | B.1.1 | 0.000544 |
S | 145 | Y145H | Tac | Cac | 28 | 28 | AY.3 | 0.000278 |
S | 145 | Y145H | Tac | Cac | 28 | 28 | AY.39 | 0.000692 |
S | 145 | Y145N | Tac | Aac | 27 | 27 | AY.25 | 0.000162 |
S | 145 | Y145H | Tac | Cac | 27 | 27 | AY.44 | 0.000164 |
S | 145 | Y145D | Tac | Gac | 26 | 26 | AY.26 | 0.000736 |
S | 145 | Y145Y | taC | taT | 26 | 26 | B.1.1.44 | 0.062651 |
S | 145 | Y145Y | taC | taT | 25 | 25 | B.1.160 | 0.00078 |
S | 145 | Y145del2 | TAC | --A | 19 | 24 | B.1.1.7 | 0.000017 |
S | 145 | Y145del2 | TAc | --c | 4 | 24 | B.1.1.7 | 0.000004 |
S | 145 | Y145del2 | TAC | C-- | 1 | 24 | B.1.1.7 | 0.000001 |
S | 145 | Y145del | TAC | --- | 23 | 23 | AY.25 | 0.000138 |
S | 145 | Y145del | TAC | --- | 23 | 23 | B.1 | 0.000211 |
S | 145 | Y145H | Tac | Cac | 23 | 23 | B.1.2 | 0.000203 |
S | 145 | Y145Y | taC | taT | 23 | 23 | B.1.243 | 0.0016 |
S | 145 | Y145H | Tac | Cac | 22 | 22 | AY.25 | 0.000132 |
S | 145 | Y145Y | taC | taT | 22 | 22 | AY.42 | 0.000885 |
S | 145 | Y145Y | taC | taT | 22 | 22 | B.1.466.2 | 0.008607 |
S | 145 | Y145H | Tac | Cac | 21 | 21 | AY.121 | 0.002842 |
S | 145 | Y145del | TAC | --- | 20 | 20 | B.1.2 | 0.000176 |
S | 145 | Y145C | tAc | tGc | 20 | 20 | C.39 | 0.377358 |
S | 145 | Y145D | Tac | Gac | 19 | 20 | P.1 | 0.000299 |
S | 145 | Y145D | TaC | GaT | 1 | 20 | P.1 | 0.000016 |
S | 145 | Y145Y | taC | taT | 19 | 19 | B.1.429 | 0.000447 |
S | 145 | Y145del | TAC | --- | 19 | 19 | B.1.526 | 0.000447 |
S | 145 | Y145N | Tac | Aac | 19 | 19 | B.1.617.2 | 0.000072 |
S | 145 | Y145D | Tac | Gac | 19 | 19 | P.1.14 | 0.000908 |
S | 145 | Y145F | tAc | tTc | 18 | 18 | All | 0.000003 |
S | 145 | Y145D | Tac | Gac | 18 | 18 | AY.103 | 0.000112 |
S | 145 | Y145Y | taC | taT | 17 | 17 | AY.27 | 0.0011 |
S | 145 | Y145N | Tac | Aac | 16 | 17 | AY.44 | 0.000097 |
S | 145 | Y145N | TaC | AaT | 1 | 17 | AY.44 | 0.000006 |
S | 145 | Y145H | Tac | Cac | 17 | 17 | B.1.621 | 0.001505 |
S | 145 | Y145T | TAc | ACc | 9 | 16 | All | 0.000002 |
S | 145 | Y145T | TAC | ACT | 7 | 16 | All | 0.000001 |
S | 145 | Y145del | TAC | --- | 16 | 16 | AY.4.2 | 0.000347 |
S | 145 | Y145D | Tac | Gac | 16 | 16 | B.1.1 | 0.00029 |
S | 145 | Y145Y | taC | taT | 15 | 15 | AY.29 | 0.000237 |
S | 145 | Y145Y | taC | taT | 15 | 15 | AY.47 | 0.000467 |
S | 145 | Y145Y | taC | taT | 15 | 15 | B.1.621 | 0.001328 |
S | 145 | Y145del | TAC | --- | 15 | 15 | P.1 | 0.000236 |
S | 145 | Y145N | Tac | Aac | 14 | 14 | AY.43 | 0.000062 |
S | 145 | Y145C | tAC | tGT | 13 | 14 | AY.44 | 0.000079 |
S | 145 | Y145C | tAc | tGc | 1 | 14 | AY.44 | 0.000006 |
S | 145 | Y145Y | taC | taT | 14 | 14 | AY.75 | 0.000784 |
S | 145 | Y145Y | taC | taT | 14 | 14 | B.1.232 | 0.007523 |
S | 145 | Y145H | Tac | Cac | 14 | 14 | B.1.427 | 0.000707 |
S | 145 | Y145D | Tac | Gac | 14 | 14 | B.1.429 | 0.000329 |
S | 145 | Y145D | Tac | Gac | 14 | 14 | B.1.526 | 0.000329 |
S | 145 | Y145del | TAC | --- | 14 | 14 | B.1.582 | 0.006869 |
S | 145 | Y145L | tAC | tTA | 12 | 13 | All | 0.000002 |
S | 145 | Y145X | taC | taA | 10 | 13 | All | 0.000002 |
S | 145 | Y145X | taC | taG | 3 | 13 | All | 0.000001 |
S | 145 | Y145L | TAc | CTc | 1 | 13 | All | 0 |
S | 145 | Y145H | Tac | Cac | 13 | 13 | AY.120 | 0.000483 |
S | 145 | Y145D | Tac | Gac | 13 | 13 | AY.25 | 0.000078 |
S | 145 | Y145D | Tac | Gac | 13 | 13 | B.1.351 | 0.000386 |
S | 145 | Y145del | TAC | --- | 12 | 12 | AY.102 | 0.000318 |
S | 145 | Y145Y | taC | taT | 12 | 12 | B.1.214.2 | 0.007194 |
S | 145 | Y145Y | taC | taT | 12 | 12 | B.1.381 | 0.09375 |
S | 145 | Y145del | TAC | --- | 12 | 12 | B.1.617.2 | 0.000045 |
S | 145 | Y145del1 | Tac | -ac | 12 | 12 | B.1.621 | 0.001062 |
S | 145 | Y145T | TAC | ACT | 6 | 12 | B.1.621 | 0.000531 |
S | 145 | Y145T | TAc | ACc | 6 | 12 | B.1.621 | 0.000531 |
S | 145 | Y145Y | taC | taT | 11 | 11 | AY.113 | 0.001566 |
S | 145 | Y145N | Tac | Aac | 11 | 11 | AY.26 | 0.000311 |
S | 145 | Y145Y | taC | taT | 11 | 11 | AY.59 | 0.005826 |
S | 145 | Y145D | Tac | Gac | 11 | 11 | B.1.1.37 | 0.002122 |
S | 145 | Y145del | TAC | --- | 11 | 11 | B.1.177 | 0.000145 |
S | 145 | Y145Y | taC | taT | 11 | 11 | B.1.177.64 | 1 |
S | 145 | Y145Y | taC | taT | 11 | 11 | B.1.596 | 0.000959 |
S | 145 | Y145H | Tac | Cac | 10 | 10 | AY.103 | 0.000062 |
S | 145 | Y145del | TAC | --- | 10 | 10 | AY.42 | 0.000402 |
S | 145 | Y145Y | taC | taT | 10 | 10 | AY.46.5 | 0.001984 |
S | 145 | Y145N | Tac | Aac | 10 | 10 | B | 0.001278 |
S | 145 | Y145Y | taC | taT | 10 | 10 | B.1.1.28 | 0.003112 |
S | 145 | Y145D | Tac | Gac | 9 | 9 | AY.100 | 0.000414 |
S | 145 | Y145Y | taC | taT | 9 | 9 | AY.20 | 0.00035 |
S | 145 | Y145del | TAC | --- | 9 | 9 | AY.44 | 0.000055 |
S | 145 | Y145H | Tac | Cac | 9 | 9 | AY.52 | 0.007329 |
S | 145 | Y145del | TAC | --- | 9 | 9 | B.1.1 | 0.000163 |
S | 145 | Y145Y | taC | taT | 9 | 9 | B.1.1.214 | 0.000499 |
S | 145 | Y145D | Tac | Gac | 9 | 9 | B.1.2 | 0.000079 |
S | 145 | Y145Y | taC | taT | 9 | 9 | B.1.234 | 0.001187 |
S | 145 | Y145Y | taC | taT | 9 | 9 | B.1.369 | 0.002567 |
S | 145 | Y145Y | taC | taT | 9 | 9 | P.1.15 | 0.002091 |
S | 145 | Y145N | Tac | Aac | 8 | 8 | AY.20 | 0.000311 |
S | 145 | Y145H | Tac | Cac | 8 | 8 | AY.45 | 0.000973 |
S | 145 | Y145H | Tac | Cac | 8 | 8 | AY.7.2 | 0.004474 |
S | 145 | Y145H | Tac | Cac | 8 | 8 | B.1 | 0.000073 |
S | 145 | Y145N | Tac | Aac | 8 | 8 | B.1.1 | 0.000145 |
S | 145 | Y145Y | taC | taT | 8 | 8 | B.1.1.519 | 0.000318 |
S | 145 | Y145del1 | TAC | CG- | 3 | 8 | B.1.1.7 | 0.000003 |
S | 145 | Y145del1 | TAc | -Nc | 2 | 8 | B.1.1.7 | 0.000002 |
S | 145 | Y145del1 | Tac | -ac | 2 | 8 | B.1.1.7 | 0.000002 |
S | 145 | Y145del1 | taC | ta- | 1 | 8 | B.1.1.7 | 0.000001 |
S | 145 | Y145del | TAC | --- | 8 | 8 | B.1.160 | 0.00025 |
S | 145 | Y145Y | taC | taT | 8 | 8 | B.1.160.10 | 0.064516 |
S | 145 | Y145N | Tac | Aac | 8 | 8 | B.1.177.73 | 0.00453 |
S | 145 | Y145D | Tac | Gac | 8 | 8 | B.1.258 | 0.000532 |
S | 145 | Y145N | Tac | Aac | 8 | 8 | B.1.351 | 0.000238 |
S | 145 | Y145D | Tac | Gac | 8 | 8 | B.1.427 | 0.000404 |
S | 145 | Y145Y | taC | taT | 8 | 8 | B.1.617.1 | 0.001032 |
S | 145 | Y145D | Tac | Gac | 8 | 8 | B.1.621 | 0.000708 |
S | 145 | Y145del | TAC | --- | 8 | 8 | B.1.630 | 0.041885 |
S | 145 | Y145Y | taC | taT | 7 | 7 | A.23.1 | 0.00493 |
S | 145 | Y145del | TAC | --- | 7 | 7 | AY.3 | 0.00007 |
S | 145 | Y145C | tAC | tGT | 7 | 7 | AY.39 | 0.000173 |
S | 145 | Y145S | tAc | tCc | 7 | 7 | B.1.1.7 | 0.000006 |
S | 145 | Y145L | tAC | tTA | 7 | 7 | B.1.1.7 | 0.000006 |
S | 145 | Y145H | Tac | Cac | 7 | 7 | B.1.177 | 0.000092 |
S | 145 | Y145Y | taC | taT | 7 | 7 | B.1.351.2 | 0.002118 |
S | 145 | Y145D | Tac | Gac | 7 | 7 | B.1.574 | 0.015054 |
S | 145 | Y145D | Tac | Gac | 7 | 7 | B.1.617.1 | 0.000903 |
S | 145 | Y145Y | taC | taT | 7 | 7 | D.2 | 0.000525 |
S | 145 | Y145H | Tac | Cac | 7 | 7 | P.1 | 0.00011 |
S | 145 | Y145D | Tac | Gac | 7 | 7 | P.1.7 | 0.002235 |
S | 145 | Y145C | tAC | tGT | 6 | 6 | AY.103 | 0.000037 |
S | 145 | Y145N | Tac | Aac | 6 | 6 | AY.103 | 0.000037 |
S | 145 | Y145H | Tac | Cac | 6 | 6 | AY.119 | 0.000212 |
S | 145 | Y145del | TAC | --- | 6 | 6 | AY.29 | 0.000095 |
S | 145 | Y145Y | taC | taT | 6 | 6 | AY.39.1 | 0.000238 |
S | 145 | Y145D | Tac | Gac | 6 | 6 | AY.43 | 0.000027 |
S | 145 | Y145D | Tac | Gac | 6 | 6 | AY.44 | 0.000037 |
S | 145 | Y145H | Tac | Cac | 6 | 6 | AY.46.2 | 0.003812 |
S | 145 | Y145H | Tac | Cac | 6 | 6 | AY.84 | 0.002625 |
S | 145 | Y145Y | taC | taT | 6 | 6 | B.1.1.294 | 0.007595 |
S | 145 | Y145del | TAC | --- | 6 | 6 | B.1.1.318 | 0.001811 |
S | 145 | Y145D | Tac | Gac | 6 | 6 | B.1.1.519 | 0.000238 |
S | 145 | Y145Y | taC | taT | 6 | 6 | B.1.110.3 | 0.00431 |
S | 145 | Y145Y | taC | taT | 6 | 6 | B.1.351 | 0.000178 |
S | 145 | Y145del | TAC | --- | 6 | 6 | B.1.351 | 0.000178 |
S | 145 | Y145Y | taC | taT | 6 | 6 | P.1.14 | 0.000287 |
S | 145 | Y145D | Tac | Gac | 6 | 6 | P.1.15 | 0.001394 |
S | 145 | Y145Y | taC | taT | 5 | 5 | A.2.5.3 | 0.051546 |
S | 145 | Y145K | TaC | AaA | 5 | 5 | All | 0.000001 |
S | 145 | Y145N | Tac | Aac | 5 | 5 | AY.102 | 0.000133 |
S | 145 | Y145Y | taC | taT | 5 | 5 | AY.106 | 0.001674 |
S | 145 | Y145Y | taC | taT | 5 | 5 | AY.28 | 0.009452 |
S | 145 | Y145D | Tac | Gac | 5 | 5 | AY.3 | 0.00005 |
S | 145 | Y145del | TAC | --- | 5 | 5 | AY.39 | 0.000124 |
S | 145 | Y145S | tAc | tCc | 5 | 5 | AY.4 | 0.000008 |
S | 145 | Y145del | TAC | --- | 5 | 5 | AY.4.2.1 | 0.000745 |
S | 145 | Y145H | Tac | Cac | 5 | 5 | AY.46.6 | 0.000361 |
S | 145 | Y145H | Tac | Cac | 5 | 5 | AY.5 | 0.000103 |
S | 145 | Y145Y | taC | taT | 5 | 5 | AY.61 | 0.000524 |
S | 145 | Y145H | Tac | Cac | 5 | 5 | AY.75.1 | 0.000902 |
S | 145 | Y145Y | taC | taT | 5 | 5 | AY.85 | 0.002136 |
S | 145 | Y145Y | taC | taT | 5 | 5 | AY.98 | 0.000395 |
S | 145 | Y145D | Tac | Gac | 5 | 5 | AY.98.1 | 0.000242 |
S | 145 | Y145C | tAc | tGc | 5 | 5 | B.1.1.1 | 0.001633 |
S | 145 | Y145Y | taC | taT | 5 | 5 | B.1.177.86 | 0.000917 |
S | 145 | Y145D | Tac | Gac | 5 | 5 | B.1.351.3 | 0.004382 |
S | 145 | Y145Y | taC | taT | 5 | 5 | B.1.409 | 0.003906 |
S | 145 | Y145F | tAc | tTc | 5 | 5 | B.1.621 | 0.000443 |
S | 145 | Y145S | tAC | tCT | 5 | 5 | B.1.621.1 | 0.002529 |
S | 145 | Y145Y | taC | taT | 5 | 5 | C.36.3 | 0.002836 |
S | 145 | Y145N | Tac | Aac | 5 | 5 | P.1 | 0.000079 |
S | 145 | Y145P | TAC | CCT | 2 | 4 | 0.111111 | |
S | 145 | Y145P | TAc | CCc | 2 | 4 | 0.111111 | |
S | 145 | Y145del | TAC | --- | 4 | 4 | A.2.5 | 0.001996 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AD.2 | 0.000876 |
S | 145 | Y145P | TAC | CCT | 2 | 4 | All | 0 |
S | 145 | Y145P | TAc | CCc | 2 | 4 | All | 0 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.100 | 0.000184 |
S | 145 | Y145del | TAC | --- | 4 | 4 | AY.103 | 0.000025 |
S | 145 | Y145N | Tac | Aac | 4 | 4 | AY.117 | 0.000338 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.119 | 0.000141 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.120.1 | 0.001284 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.20 | 0.000155 |
S | 145 | Y145C | tAC | tGT | 3 | 4 | AY.25 | 0.000018 |
S | 145 | Y145C | tAc | tGc | 1 | 4 | AY.25 | 0.000006 |
S | 145 | Y145N | Tac | Aac | 4 | 4 | AY.3 | 0.00004 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.33 | 0.000267 |
S | 145 | Y145del | TAC | --- | 4 | 4 | AY.34.1 | 0.00204 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.39.2 | 0.006163 |
S | 145 | Y145N | Tac | Aac | 3 | 4 | AY.4 | 0.000005 |
S | 145 | Y145N | TaC | AaT | 1 | 4 | AY.4 | 0.000002 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | AY.4.4 | 0.001637 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | AY.46 | 0.000416 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.46.4 | 0.000658 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.5.3 | 0.00135 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.6 | 0.000165 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | AY.75 | 0.000224 |
S | 145 | Y145H | Tac | Cac | 4 | 4 | AY.75 | 0.000224 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.75.1 | 0.000721 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.88 | 0.003537 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.9.2 | 0.000147 |
S | 145 | Y145N | Tac | Aac | 4 | 4 | AY.92 | 0.001149 |
S | 145 | Y145Y | taC | taT | 4 | 4 | AY.98.1 | 0.000194 |
S | 145 | Y145del | TAC | --- | 4 | 4 | AZ.2 | 0.003284 |
S | 145 | Y145F | tAc | tTc | 4 | 4 | B.1 | 0.000037 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | B.1.1.218 | 0.030769 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | B.1.160 | 0.000125 |
S | 145 | Y145Y | taC | taT | 4 | 4 | B.1.177.12 | 0.000607 |
S | 145 | Y145del | TAC | --- | 4 | 4 | B.1.177.21 | 0.000306 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | B.1.177.81 | 0.000757 |
S | 145 | Y145del | TAC | --- | 4 | 4 | B.1.243 | 0.000278 |
S | 145 | Y145Y | taC | taT | 4 | 4 | B.1.408 | 0.01476 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | B.1.637 | 0.000292 |
S | 145 | Y145Y | taC | taT | 4 | 4 | C.37 | 0.000464 |
S | 145 | Y145Y | taC | taT | 4 | 4 | P.1.1 | 0.001271 |
S | 145 | Y145D | Tac | Gac | 4 | 4 | P.1.10 | 0.001078 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | A | 0.001161 |
S | 145 | Y145Y | taC | taT | 3 | 3 | A.2 | 0.001985 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | A.2.5 | 0.001497 |
S | 145 | Y145Y | taC | taT | 3 | 3 | A.2.5 | 0.001497 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.1 | 0.001187 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | AY.100 | 0.000138 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | AY.110 | 0.000338 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.110 | 0.000338 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.111 | 0.000549 |
S | 145 | Y145del | TAC | --- | 3 | 3 | AY.120 | 0.000112 |
S | 145 | Y145del | TAC | --- | 3 | 3 | AY.121 | 0.000406 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | AY.13 | 0.000483 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.13 | 0.000483 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.23 | 0.000209 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | AY.39 | 0.000074 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | AY.39 | 0.000074 |
S | 145 | Y145del1 | Tac | -ac | 2 | 3 | AY.4 | 0.000003 |
S | 145 | Y145del1 | tAc | t-c | 1 | 3 | AY.4 | 0.000002 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | AY.4.2.1 | 0.000447 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | AY.4.2.1 | 0.000447 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | AY.42 | 0.000121 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | AY.42 | 0.000121 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | AY.65 | 0.001599 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.7.1 | 0.000338 |
S | 145 | Y145Y | taC | taT | 3 | 3 | AY.9.1 | 0.000251 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | AY.93 | 0.000819 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | AY.95 | 0.002283 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | AY.98 | 0.000237 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | AY.98 | 0.000237 |
S | 145 | Y145X | taC | taA | 2 | 3 | B.1 | 0.000018 |
S | 145 | Y145X | taC | taG | 1 | 3 | B.1 | 0.000009 |
S | 145 | Y145del | TAC | --- | 3 | 3 | B.1.1.284 | 0.000322 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.1.1.432 | 0.003797 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | B.1.177.58 | 0.003995 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | B.1.177.62 | 0.003576 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.1.240 | 0.000647 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.1.241 | 0.002435 |
S | 145 | Y145del | TAC | --- | 3 | 3 | B.1.319 | 0.009146 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.1.36 | 0.000438 |
S | 145 | Y145del | TAC | --- | 3 | 3 | B.1.36 | 0.000438 |
S | 145 | Y145N | Tac | Aac | 3 | 3 | B.1.429 | 0.000071 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | B.1.596 | 0.000261 |
S | 145 | Y145del | TAC | --- | 3 | 3 | B.1.596 | 0.000261 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | B.1.617.1 | 0.000387 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | B.1.617.2 | 0.000011 |
S | 145 | Y145del | TAC | --- | 3 | 3 | B.1.621 | 0.000266 |
S | 145 | Y145D | Tac | Gac | 3 | 3 | B.1.621.1 | 0.001517 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.1.628 | 0.001057 |
S | 145 | Y145Y | taC | taT | 3 | 3 | B.6.6 | 0.002667 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | C.37 | 0.000348 |
S | 145 | Y145Y | taC | taT | 3 | 3 | P.1.12 | 0.001452 |
S | 145 | Y145H | Tac | Cac | 3 | 3 | P.1.15 | 0.000697 |
S | 145 | Y145Y | taC | taT | 3 | 3 | P.1.17 | 0.000485 |
S | 145 | Y145Y | taC | taT | 3 | 3 | P.2 | 0.00056 |
S | 145 | Y145Y | taC | taT | 3 | 3 | R.1 | 0.00027 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | 0.111111 | |
S | 145 | Y145del2 | TAc | --c | 2 | 2 | 0.111111 | |
S | 145 | Y145S | tAC | tCT | 1 | 2 | 0.055556 | |
S | 145 | Y145S | tAc | tCc | 1 | 2 | 0.055556 | |
S | 145 | Y145Y | taC | taT | 2 | 2 | A.1 | 0.000564 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | A.2.5.1 | 0.009615 |
S | 145 | Y145del | TAC | --- | 2 | 2 | A.27 | 0.003311 |
S | 145 | Y145Q | TaC | CaA | 1 | 2 | All | 0 |
S | 145 | Y145I | TAC | ATT | 1 | 2 | All | 0 |
S | 145 | Y145I | TAc | ATc | 1 | 2 | All | 0 |
S | 145 | Y145Q | TaC | CaG | 1 | 2 | All | 0 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AP.1 | 0.003003 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.100 | 0.000092 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.101 | 0.000981 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | AY.102 | 0.000053 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.108 | 0.002205 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.117 | 0.000169 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.119 | 0.000071 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.119 | 0.000071 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.23 | 0.000139 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.23.1 | 0.000835 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.26 | 0.000057 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.27 | 0.000129 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.29 | 0.000032 |
S | 145 | Y145H | TaC | CaT | 1 | 2 | AY.29 | 0.000016 |
S | 145 | Y145H | Tac | Cac | 1 | 2 | AY.29 | 0.000016 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.29.1 | 0.000441 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.29.1 | 0.000441 |
S | 145 | Y145C | tAC | tGT | 2 | 2 | AY.3 | 0.00002 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.33 | 0.000134 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.35 | 0.000466 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.36 | 0.000296 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.39.1 | 0.000079 |
S | 145 | Y145C | tAc | tGc | 2 | 2 | AY.4 | 0.000003 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.4.5 | 0.000215 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.40 | 0.001929 |
S | 145 | Y145del1 | taC | ta- | 1 | 2 | AY.43 | 0.000004 |
S | 145 | Y145del1 | Tac | -ac | 1 | 2 | AY.43 | 0.000004 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.45 | 0.000243 |
S | 145 | Y145del1 | TAc | -Nc | 2 | 2 | AY.45 | 0.000243 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.46 | 0.000208 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.46 | 0.000208 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.46.1 | 0.002053 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.46.5 | 0.000397 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.46.6 | 0.000144 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.52 | 0.001629 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.53 | 0.000575 |
S | 145 | Y145C | tAC | tGT | 2 | 2 | AY.54 | 0.000191 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.54 | 0.000191 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.55 | 0.001835 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.6 | 0.000082 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.65 | 0.001066 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.67 | 0.000929 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.68 | 0.000547 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.69 | 0.000373 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.7.2 | 0.001119 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.75 | 0.000112 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | AY.75.1 | 0.000361 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.84 | 0.000875 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.9 | 0.000135 |
S | 145 | Y145Y | taC | taT | 2 | 2 | AY.9 | 0.000135 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.9.1 | 0.000167 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | AY.9.2 | 0.000073 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.91 | 0.001461 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.98.1 | 0.000097 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | AY.98.1 | 0.000097 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AY.99 | 0.002099 |
S | 145 | Y145del | TAC | --- | 2 | 2 | AZ.5 | 0.007018 |
S | 145 | Y145C | tAc | tGc | 2 | 2 | B.1 | 0.000018 |
S | 145 | Y145del2 | TAC | --A | 1 | 2 | B.1.1 | 0.000018 |
S | 145 | Y145del2 | tAC | t-- | 1 | 2 | B.1.1 | 0.000018 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.221 | 0.020202 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.1.298 | 0.001724 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.306 | 0.000877 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.1.311 | 0.000716 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.1.317 | 0.000823 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.317 | 0.000823 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | B.1.1.318 | 0.000604 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.326 | 0.003521 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.351 | 0.005587 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | B.1.1.368 | 0.006173 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.1.519 | 0.000079 |
S | 145 | Y145T | TAc | ACc | 2 | 2 | B.1.1.7 | 0.000002 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.1.7 | 0.000002 |
S | 145 | Y145F | tAc | tTc | 2 | 2 | B.1.1.7 | 0.000002 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.13 | 0.004751 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | B.1.157 | 0.00597 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.160 | 0.000062 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.177.7 | 0.00033 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.177.87 | 0.001456 |
S | 145 | Y145del1 | tAc | t-c | 1 | 2 | B.1.2 | 0.000009 |
S | 145 | Y145del1 | taC | ta- | 1 | 2 | B.1.2 | 0.000009 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.221 | 0.000142 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.234 | 0.000264 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.258.17 | 0.000208 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.279 | 0.001027 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | B.1.324 | 0.00321 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.344 | 0.016393 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.351.5 | 0.001199 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.36.18 | 0.00084 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.36.29 | 0.001035 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.36.38 | 0.003284 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | B.1.367 | 0.001585 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.385 | 0.021277 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.39 | 0.007812 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | B.1.438.1 | 0.000215 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.525 | 0.000226 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | B.1.533 | 0.019231 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.564 | 0.000852 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.582 | 0.000981 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.582 | 0.000981 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.595 | 0.000522 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.595 | 0.000522 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.612 | 0.005305 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.617.1 | 0.000258 |
S | 145 | Y145del | TAC | --- | 2 | 2 | B.1.620 | 0.001892 |
S | 145 | Y145L | tAC | tTA | 2 | 2 | B.1.621 | 0.000177 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.625 | 0.004706 |
S | 145 | Y145del1 | taC | ta- | 2 | 2 | B.1.627 | 0.00404 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | B.1.637 | 0.000146 |
S | 145 | Y145Y | taC | taT | 2 | 2 | B.1.9.4 | 0.01227 |
S | 145 | Y145del | TAC | --- | 2 | 2 | C.37 | 0.000232 |
S | 145 | Y145del | TAC | --- | 2 | 2 | P.1.11 | 0.020408 |
S | 145 | Y145N | Tac | Aac | 2 | 2 | P.1.12 | 0.000968 |
S | 145 | Y145del | TAC | --- | 2 | 2 | P.1.15 | 0.000465 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | P.1.6 | 0.003891 |
S | 145 | Y145D | Tac | Gac | 2 | 2 | P.2 | 0.000373 |
S | 145 | Y145del | TAC | --- | 2 | 2 | P.3 | 0.00319 |
S | 145 | Y145H | Tac | Cac | 2 | 2 | P.3 | 0.00319 |
S | 145 | Y145del | TAC | --- | 2 | 2 | Q.2 | 0.001227 |
S | 145 | Y145del | TAC | --- | 2 | 2 | Q.3 | 0.00029 |
S | 145 | Y145Y | taC | taT | 1 | 1 | 0.055556 | |
S | 145 | Y145F | tAc | tTc | 1 | 1 | 0.055556 | |
S | 145 | Y145del | TAC | --- | 1 | 1 | A | 0.000387 |
S | 145 | Y145X | taC | taA | 1 | 1 | A | 0.000387 |
S | 145 | Y145del | TAC | --- | 1 | 1 | A.1 | 0.000282 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | A.1 | 0.000282 |
S | 145 | Y145del | TAC | --- | 1 | 1 | A.19 | 0.009434 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | A.2.5 | 0.000499 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | A.23.1 | 0.000704 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AC.1 | 0.037037 |
S | 145 | Y145del1 | TAC | -NN | 1 | 1 | AD.2 | 0.000219 |
S | 145 | Y145V | TAc | GTc | 1 | 1 | All | 0 |
S | 145 | Y145E | TaC | GaA | 1 | 1 | All | 0 |
S | 145 | Y145G | TAc | GGc | 1 | 1 | All | 0 |
S | 145 | Y145A | TAc | GCc | 1 | 1 | All | 0 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AU.3 | 0.00211 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.1 | 0.000396 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.10 | 0.00053 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.101 | 0.00049 |
S | 145 | Y145del1 | taC | ta- | 1 | 1 | AY.101 | 0.00049 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | AY.102 | 0.000027 |
S | 145 | Y145C | tAc | tGc | 1 | 1 | AY.102 | 0.000027 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.106 | 0.000335 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.106 | 0.000335 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.107 | 0.000466 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.107 | 0.000466 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.108 | 0.001103 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.109 | 0.00074 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.109 | 0.00074 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.110 | 0.000113 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.111 | 0.000183 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.113 | 0.000142 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.114 | 0.000231 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.114 | 0.000231 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.114 | 0.000231 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.116 | 0.000287 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.116 | 0.000287 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.117 | 0.000085 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.118 | 0.000063 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.119 | 0.000035 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.12 | 0.000316 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.12 | 0.000316 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.12 | 0.000316 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.120 | 0.000037 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.120.2 | 0.001285 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.121 | 0.000135 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.14 | 0.000088 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.14 | 0.000088 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.16 | 0.00038 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.22 | 0.002092 |
S | 145 | Y145L | tAC | tTA | 1 | 1 | AY.23 | 0.00007 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.23 | 0.00007 |
S | 145 | Y145X | taC | taA | 1 | 1 | AY.24 | 0.000431 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.24 | 0.000431 |
S | 145 | Y145del1 | taC | ta- | 1 | 1 | AY.25 | 0.000006 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.27 | 0.000065 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.29.1 | 0.000221 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.3.1 | 0.000085 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.3.1 | 0.000085 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.30 | 0.000396 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.32 | 0.000532 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.33 | 0.000067 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | AY.34 | 0.000097 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.34 | 0.000097 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.34.1 | 0.00051 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.35 | 0.000233 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.35 | 0.000233 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.36 | 0.000148 |
S | 145 | Y145del1 | Tac | -ac | 1 | 1 | AY.36 | 0.000148 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.36 | 0.000148 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.36 | 0.000148 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.38 | 0.000499 |
S | 145 | Y145del1 | TAc | -Nc | 1 | 1 | AY.38 | 0.000499 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.39.1 | 0.00004 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | AY.4 | 0.000002 |
S | 145 | Y145K | TaC | AaA | 1 | 1 | AY.4 | 0.000002 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.4.1 | 0.000737 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.4.2 | 0.000022 |
S | 145 | Y145Q | TaC | CaG | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.4.3 | 0.000842 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.4.5 | 0.000107 |
S | 145 | Y145X | taC | taA | 1 | 1 | AY.42 | 0.00004 |
S | 145 | Y145K | TaC | AaA | 1 | 1 | AY.43 | 0.000004 |
S | 145 | Y145I | TAc | ATc | 1 | 1 | AY.43 | 0.000004 |
S | 145 | Y145C | tAc | tGc | 1 | 1 | AY.43 | 0.000004 |
S | 145 | Y145X | taC | taA | 1 | 1 | AY.43 | 0.000004 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.45 | 0.000122 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.45 | 0.000122 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.46 | 0.000104 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.46 | 0.000104 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.46.2 | 0.000635 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.46.4 | 0.000165 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.46.6 | 0.000072 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.47 | 0.000031 |
S | 145 | Y145D | TaC | GaT | 1 | 1 | AY.47 | 0.000031 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.47 | 0.000031 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.48 | 0.000465 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.5 | 0.000021 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.5 | 0.000021 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.5.3 | 0.000337 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.5.3 | 0.000337 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.51 | 0.000909 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.52 | 0.000814 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.53 | 0.000288 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.54 | 0.000095 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.54 | 0.000095 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.56 | 0.001605 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.57 | 0.000656 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.58 | 0.000907 |
S | 145 | Y145X | taC | taA | 1 | 1 | AY.59 | 0.00053 |
S | 145 | Y145T | TAC | ACT | 1 | 1 | AY.59 | 0.00053 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.60 | 0.000938 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.61 | 0.000105 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | AY.61 | 0.000105 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.62 | 0.000436 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.62 | 0.000436 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.62 | 0.000436 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.64 | 0.000595 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.65 | 0.000533 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.65 | 0.000533 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.72 | 0.001361 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.73 | 0.000665 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.74 | 0.000116 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.74 | 0.000116 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.74 | 0.000116 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.75 | 0.000056 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.78 | 0.001541 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.78 | 0.001541 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | AY.81 | 0.001992 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.82 | 0.001357 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.85 | 0.000427 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.87 | 0.000833 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.9 | 0.000068 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | AY.9.1 | 0.000084 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.9.1 | 0.000084 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.9.2 | 0.000037 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.9.2 | 0.000037 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.9.2.1 | 0.001976 |
S | 145 | Y145del1 | TAc | -Nc | 1 | 1 | AY.91 | 0.00073 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.92 | 0.000287 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.92 | 0.000287 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.92 | 0.000287 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | AY.95 | 0.000761 |
S | 145 | Y145T | TAc | ACc | 1 | 1 | AY.98 | 0.000079 |
S | 145 | Y145Y | taC | taT | 1 | 1 | AY.99 | 0.001049 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.99 | 0.001049 |
S | 145 | Y145del | TAC | --- | 1 | 1 | AY.99.1 | 0.001553 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | AY.99.2 | 0.000092 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | AY.99.2 | 0.000092 |
S | 145 | Y145S | tAc | tCc | 1 | 1 | B | 0.000128 |
S | 145 | Y145S | tAc | tCc | 1 | 1 | B.1 | 0.000009 |
S | 145 | Y145L | tAC | tTA | 1 | 1 | B.1 | 0.000009 |
S | 145 | Y145del1 | Tac | -ac | 1 | 1 | B.1 | 0.000009 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.1 | 0.000018 |
S | 145 | Y145C | tAc | tGc | 1 | 1 | B.1.1 | 0.000018 |
S | 145 | Y145del1 | tAc | t-c | 1 | 1 | B.1.1 | 0.000018 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.1 | 0.000327 |
S | 145 | Y145del1 | Tac | -ac | 1 | 1 | B.1.1.1 | 0.000327 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.139 | 0.022727 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.141 | 0.002012 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.157 | 0.000913 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.161 | 0.003534 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.189 | 0.001513 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.210 | 0.005714 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.216 | 0.00089 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.219 | 0.005 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.1.221 | 0.010101 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.222 | 0.000204 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.236 | 0.006897 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.25 | 0.000569 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.1.25 | 0.000569 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.263 | 0.001558 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.263 | 0.001558 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.269 | 0.001353 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.28 | 0.000311 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.303 | 0.002762 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.306 | 0.000438 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.311 | 0.000358 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.316 | 0.000925 |
S | 145 | Y145del1 | Tac | -ac | 1 | 1 | B.1.1.318 | 0.000302 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.1.318 | 0.000302 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.348 | 0.000796 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.348 | 0.000796 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.354 | 0.004386 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.1.37 | 0.000193 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.372 | 0.000689 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.39 | 0.00051 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.41 | 0.006329 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.416 | 0.000905 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.419 | 0.007407 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.432 | 0.001266 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.447 | 0.035714 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.47 | 0.005348 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.486 | 0.001577 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.50 | 0.000679 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.517 | 0.006803 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.523 | 0.001563 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.528 | 0.004808 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.528 | 0.004808 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.1.63 | 0.000386 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.1.63 | 0.000386 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.1.63 | 0.000386 |
S | 145 | Y145Q | TaC | CaA | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145A | TAc | GCc | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145C | tAc | tGc | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145K | TaC | AaA | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145G | TAc | GGc | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145X | taC | taG | 1 | 1 | B.1.1.7 | 0.000001 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.1.99 | 0.02381 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.105 | 0.009615 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.110 | 0.004525 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.126 | 0.001276 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.128 | 0.000635 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.139 | 0.000733 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.160.23 | 0.004831 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.160.30 | 0.002976 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.160.7 | 0.002079 |
S | 145 | Y145X | taC | taA | 1 | 1 | B.1.166 | 0.008475 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.167 | 0.007812 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.177 | 0.000013 |
S | 145 | Y145X | taC | taA | 1 | 1 | B.1.177 | 0.000013 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.3 | 0.007634 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.4 | 0.000211 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.177.4 | 0.000211 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.43 | 0.001477 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.177.51 | 0.004566 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.53 | 0.002392 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.56 | 0.000668 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.57 | 0.000281 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.177.6 | 0.000977 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.6 | 0.000977 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.177.68 | 0.015152 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.74 | 0.015152 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.75 | 0.001041 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.76 | 0.002494 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.177.81 | 0.000189 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.177.86 | 0.000183 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.180 | 0.05 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.189 | 0.004292 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.2 | 0.000009 |
S | 145 | Y145C | tAc | tGc | 1 | 1 | B.1.2 | 0.000009 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.208 | 0.04 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.210 | 0.002132 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.214 | 0.003663 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.220 | 0.01087 |
S | 145 | Y145del1 | Tac | -ac | 1 | 1 | B.1.221 | 0.000071 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.221 | 0.000071 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.221 | 0.000071 |
S | 145 | Y145X | taC | taA | 1 | 1 | B.1.221.4 | 0.004167 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.234 | 0.000132 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.239 | 0.001221 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.240.2 | 0.030303 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.258.17 | 0.000104 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.258.17 | 0.000104 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.258.22 | 0.002667 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.265 | 0.001271 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.279 | 0.000514 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.3 | 0.002618 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.311 | 0.000275 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.326 | 0.007576 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.343 | 0.020833 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.351 | 0.00003 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.351.2 | 0.000303 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.36 | 0.000146 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.36 | 0.000146 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.36.17 | 0.000494 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.36.27 | 0.000763 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.36.31 | 0.001751 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.360 | 0.012658 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.367 | 0.000792 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.37 | 0.014706 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.380 | 0.006623 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.380 | 0.006623 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.391 | 0.001127 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.396 | 0.000706 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.399 | 0.001934 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.399 | 0.001934 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.409 | 0.000781 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.415 | 0.014286 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.416 | 0.001269 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.427 | 0.00005 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.427 | 0.00005 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | B.1.427 | 0.00005 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.429 | 0.000024 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.433 | 0.003195 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.459 | 0.004082 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.459 | 0.004082 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.459 | 0.004082 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.466.1 | 0.007194 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.470 | 0.001404 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.497 | 0.000315 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.503 | 0.002488 |
S | 145 | Y145del1 | tAC | t-N | 1 | 1 | B.1.507 | 0.011236 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.523 | 0.002451 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.524 | 0.001406 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.525 | 0.000113 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.525 | 0.000113 |
S | 145 | Y145S | tAc | tCc | 1 | 1 | B.1.526 | 0.000024 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.526 | 0.000024 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.526 | 0.000024 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.527 | 0.003704 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.565 | 0.00081 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.565 | 0.00081 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.567 | 0.003333 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.568 | 0.001111 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.575 | 0.000303 |
S | 145 | Y145K | TaC | AaA | 1 | 1 | B.1.582 | 0.000491 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.585 | 0.027778 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.1.587 | 0.001898 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.588 | 0.00091 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | B.1.596 | 0.000087 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.596.1 | 0.009346 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.597 | 0.00463 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.612 | 0.002653 |
S | 145 | Y145del2 | TAc | --c | 1 | 1 | B.1.617.1 | 0.000129 |
S | 145 | Y145F | tAc | tTc | 1 | 1 | B.1.617.2 | 0.000004 |
S | 145 | Y145X | taC | taG | 1 | 1 | B.1.617.2 | 0.000004 |
S | 145 | Y145C | tAC | tGT | 1 | 1 | B.1.617.2 | 0.000004 |
S | 145 | Y145L | TAc | CTc | 1 | 1 | B.1.617.2 | 0.000004 |
S | 145 | Y145K | TaC | AaA | 1 | 1 | B.1.618 | 0.004032 |
S | 145 | Y145del2 | tAC | t-- | 1 | 1 | B.1.621 | 0.000089 |
S | 145 | Y145I | TAC | ATT | 1 | 1 | B.1.621 | 0.000089 |
S | 145 | Y145L | tAC | tTA | 1 | 1 | B.1.621.1 | 0.000506 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.1.623 | 0.000536 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.630 | 0.005236 |
S | 145 | Y145E | TaC | GaA | 1 | 1 | B.1.637 | 0.000073 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.1.638 | 0.052632 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.9.4 | 0.006135 |
S | 145 | Y145del | TAC | --- | 1 | 1 | B.1.93 | 0.000934 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.11 | 0.005128 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | B.31 | 0.003731 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.4 | 0.002208 |
S | 145 | Y145Y | taC | taT | 1 | 1 | B.40 | 0.000364 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | B.55 | 0.00295 |
S | 145 | Y145V | TAc | GTc | 1 | 1 | B.6 | 0.00091 |
S | 145 | Y145S | tAc | tCc | 1 | 1 | B.6 | 0.00091 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | C.18 | 0.002591 |
S | 145 | Y145del | TAC | --- | 1 | 1 | C.36 | 0.000911 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | C.37 | 0.000116 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | N.10 | 0.029412 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | P.1.1 | 0.000318 |
S | 145 | Y145del | TAC | --- | 1 | 1 | P.1.1 | 0.000318 |
S | 145 | Y145N | Tac | Aac | 1 | 1 | P.1.14 | 0.000048 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | P.1.14 | 0.000048 |
S | 145 | Y145Y | taC | taT | 1 | 1 | P.1.16 | 0.000374 |
S | 145 | Y145D | Tac | Gac | 1 | 1 | P.1.17 | 0.000162 |
S | 145 | Y145del | TAC | --- | 1 | 1 | P.1.17 | 0.000162 |
S | 145 | Y145del | TAC | --- | 1 | 1 | P.1.2 | 0.001156 |
S | 145 | Y145Y | taC | taT | 1 | 1 | P.1.2 | 0.001156 |
S | 145 | Y145del | TAC | --- | 1 | 1 | P.2 | 0.000187 |
S | 145 | Y145del | TAC | --- | 1 | 1 | Q.1 | 0.000126 |
S | 145 | Y145del | TAC | --- | 1 | 1 | Q.7 | 0.001111 |
S | 145 | Y145H | Tac | Cac | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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