CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 139 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S139P139deldelCCA---943943121977-21979

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S139P139delCCA---943943All0.00018
S139P139delCCA---160160AT.10.820513
S139P139delCCA---100100C.380.806452
S139P139delCCA---9898P.10.001544
S139P139delCCA---6363B.1.1.70.000056
S139P139delCCA---6060AY.40.000093
S139P139delCCA---4242B.1.4290.000988
S139P139delCCA---3939AY.430.000173
S139P139delCCA---2222B.10.000202
S139P139delCCA---2222B.1.1770.00029
S139P139delCCA---2121B.1.5760.019039
S139P139delCCA---1616AY.4.20.000347
S139P139delCCA---1515AY.440.000091
S139P139delCCA---1313AY.250.000078
S139P139delCCA---1212AY.1020.000318
S139P139delCCA---1111P.1.140.000526
S139P139delCCA---1010B.1.20.000088
S139P139delCCA---1010B.1.617.20.000038
S139P139delCCA---99B.1.1600.000281
S139P139delCCA---88B.1.10.000145
S139P139delCCA---77AY.420.000282
S139P139delCCA---77AY.90.000473
S139P139delCCA---77B.1.3510.000208
S139P139delCCA---66B.1.5260.000141
S139P139delCCA---55AY.290.000079
S139P139delCCA---55AY.4.2.10.000745
S139P139delCCA---55B.1.2340.00066
S139P139delCCA---440.222222
S139P139delCCA---44A.2.50.001996
S139P139delCCA---44AY.1030.000025
S139P139delCCA---44AY.1190.000141
S139P139delCCA---44AY.30.00004
S139P139delCCA---33AY.1200.000112
S139P139delCCA---33AY.34.10.00153
S139P139delCCA---33AY.470.000093
S139P139delCCA---33B.1.1.370.000579
S139P139delCCA---33B.1.2430.000209
S139P139delCCA---33B.1.3190.009146
S139P139delCCA---33B.1.360.000438
S139P139delCCA---33B.1.4270.000151
S139P139delCCA---33B.1.5610.001191
S139P139delCCA---33B.1.6210.000266
S139P139delCCA---33P.1.160.001122
S139P139delCCA---22AY.1080.002205
S139P139delCCA---22AY.4.50.000215
S139P139delCCA---22AY.460.000208
S139P139delCCA---22AY.650.001066
S139P139delCCA---22AY.740.000231
S139P139delCCA---22AY.750.000112
S139P139delCCA---22AY.990.002099
S139P139delCCA---22AZ.50.007018
S139P139delCCA---22B.1.1.3110.000716
S139P139delCCA---22B.1.177.120.000303
S139P139delCCA---22B.1.177.570.000562
S139P139delCCA---22B.1.2410.001623
S139P139delCCA---22B.1.36.380.003284
S139P139delCCA---22B.1.5950.000522
S139P139delCCA---22B.1.5960.000174
S139P139delCCA---22B.1.6200.001892
S139P139delCCA---22C.36.3.10.005435
S139P139delCCA---22C.370.000232
S139P139delCCA---22P.1.100.000539
S139P139delCCA---22P.1.150.000465
S139P139delCCA---22P.1.170.000324
S139P139delCCA---22P.30.00319
S139P139delCCA---11A.10.000282
S139P139delCCA---11AD.20.000219
S139P139delCCA---11AY.1060.000335
S139P139delCCA---11AY.1070.000466
S139P139delCCA---11AY.1090.00074
S139P139delCCA---11AY.1180.000063
S139P139delCCA---11AY.120.000316
S139P139delCCA---11AY.120.20.001285
S139P139delCCA---11AY.1210.000135
S139P139delCCA---11AY.260.000028
S139P139delCCA---11AY.270.000065
S139P139delCCA---11AY.29.10.000221
S139P139delCCA---11AY.330.000067
S139P139delCCA---11AY.350.000233
S139P139delCCA---11AY.360.000148
S139P139delCCA---11AY.390.000025
S139P139delCCA---11AY.4.10.000737
S139P139delCCA---11AY.450.000122
S139P139delCCA---11AY.50.000021
S139P139delCCA---11AY.600.000938
S139P139delCCA---11AY.620.000436
S139P139delCCA---11AY.7.20.000559
S139P139delCCA---11AY.730.000665
S139P139delCCA---11AY.780.001541
S139P139delCCA---11AY.840.000437
S139P139delCCA---11AY.850.000427
S139P139delCCA---11AY.9.20.000037
S139P139delCCA---11AY.920.000287
S139P139delCCA---11AY.98.10.000048
S139P139delCCA---11AY.99.10.001553
S139P139delCCA---11B.1.1.1390.022727
S139P139delCCA---11B.1.1.1700.001247
S139P139delCCA---11B.1.1.2840.000107
S139P139delCCA---11B.1.1.3060.000438
S139P139delCCA---11B.1.1.3180.000302
S139P139delCCA---11B.1.1.390.00051
S139P139delCCA---11B.1.1.3970.002252
S139P139delCCA---11B.1.1.410.006329
S139P139delCCA---11B.1.1.5280.004808
S139P139delCCA---11B.1.1110.001175
S139P139delCCA---11B.1.160.230.004831
S139P139delCCA---11B.1.177.110.001698
S139P139delCCA---11B.1.177.40.000211
S139P139delCCA---11B.1.177.420.000894
S139P139delCCA---11B.1.177.450.000381
S139P139delCCA---11B.1.177.50.001242
S139P139delCCA---11B.1.177.540.000606
S139P139delCCA---11B.1.177.760.002494
S139P139delCCA---11B.1.177.810.000189
S139P139delCCA---11B.1.177.860.000183
S139P139delCCA---11B.1.177.870.000728
S139P139delCCA---11B.1.2210.000071
S139P139delCCA---11B.1.2220.001692
S139P139delCCA---11B.1.2320.000537
S139P139delCCA---11B.1.258.110.000396
S139P139delCCA---11B.1.258.140.00098
S139P139delCCA---11B.1.36.310.001751
S139P139delCCA---11B.1.370.014706
S139P139delCCA---11B.1.3800.006623
S139P139delCCA---11B.1.3960.000706
S139P139delCCA---11B.1.4000.000429
S139P139delCCA---11B.1.4160.001269
S139P139delCCA---11B.1.5850.027778
S139P139delCCA---11B.1.5870.001898
S139P139delCCA---11B.1.596.10.009346
S139P139delCCA---11B.1.6120.002653
S139P139delCCA---11B.1.6370.000073
S139P139delCCA---11B.1.930.000934
S139P139delCCA---11B.400.000364
S139P139delCCA---11P.1.10.000318
S139P139delCCA---11P.1.120.000484
S139P139delCCA---11P.1.130.000898
S139P139delCCA---11Q.70.001111