CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 130

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S130V130VsyngtCgtT590657680.97663421950-21952
S130V130VsyngtCgtG5906960.016254721950-21952
S130V130VsyngtCgtA5906420.0071114121950-21952
S130V130deldelGTC---474474121950-21952
S130V130FnonsynGtcTtc334334121950-21952
S130V130LnonsynGtcCtc2212170.981921950-21952
S130V130LnonsynGtCTtA22130.013574721950-21952
S130V130LnonsynGtCCtA22110.0045248921950-21952
S130V130InonsynGtcAtc48470.97916721950-21952
S130V130InonsynGtCAtT4810.020833321950-21952
S130V130AnonsyngTcgCc3939121950-21952
S130V130GnonsyngTcgGc1010121950-21952
S130V130del1delgtCgt-730.42857121950-21952
S130V130del1delGtc-tc720.28571421950-21952
S130V130del1delGtC-tG710.14285721950-21952
S130V130del1delgTcg-c710.14285721950-21952
S130V130DnonsyngTcgAc66121950-21952
S130V130del2delgTCg--530.621950-21952
S130V130del2delGTC--N510.221950-21952
S130V130del2delGTc--c510.221950-21952
S130V130SnonsynGTCAGT22121950-21952
S130V130MnonsynGtCAtG22121950-21952
S130V130QnonsynGTCCAA11121950-21952
S130V130NnonsynGTcAAc11121950-21952

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S130V130VgtCgtT57685906All0.001103
S130V130VgtCgtG965906All0.000018
S130V130VgtCgtA425906All0.000008
S130V130VgtCgtT11641211B.1.1.70.001042
S130V130VgtCgtG441211B.1.1.70.000039
S130V130VgtCgtA31211B.1.1.70.000003
S130V130delGTC---474474All0.000091
S130V130VgtCgtT386386B.1.5960.033635
S130V130VgtCgtT361362AY.40.000562
S130V130VgtCgtA1362AY.40.000002
S130V130FGtcTtc334334All0.000064
S130V130VgtCgtT277277AM.40.989286
S130V130VgtCgtT240256B.1.617.20.000904
S130V130VgtCgtA15256B.1.617.20.000056
S130V130VgtCgtG1256B.1.617.20.000004
S130V130VgtCgtT221222B.1.20.001946
S130V130VgtCgtA1222B.1.20.000009
S130V130LGtcCtc217221All0.000042
S130V130LGtCTtA3221All0.000001
S130V130LGtCCtA1221All0
S130V130VgtCgtT181218AY.1030.001124
S130V130VgtCgtG37218AY.1030.00023
S130V130VgtCgtT203203B.1.1.2400.953052
S130V130VgtCgtT172179B.10.001575
S130V130VgtCgtA4179B.10.000037
S130V130VgtCgtG3179B.10.000027
S130V130VgtCgtT177177AY.440.001077
S130V130VgtCgtT144146AY.250.000866
S130V130VgtCgtG1146AY.250.000006
S130V130VgtCgtA1146AY.250.000006
S130V130LGtcCtc112112AY.40.000174
S130V130delGTC---105105B.1.617.20.000395
S130V130VgtCgtT8282B.1.10.001488
S130V130VgtCgtT7979AY.1130.011249
S130V130delGTC---7676AY.430.000337
S130V130VgtCgtT7676B.1.1.10.024828
S130V130VgtCgtT7575AY.430.000332
S130V130FGtcTtc7272AY.40.000112
S130V130VgtCgtT7070AY.1020.001856
S130V130FGtcTtc7070AY.9.20.002571
S130V130VgtCgtT6464B.1.1.5190.002541
S130V130VgtCgtT6264B.1.360.009046
S130V130VgtCgtA264B.1.360.000292
S130V130VgtCgtT6262B.1.1770.000816
S130V130VgtCgtT5858AY.9.20.00213
S130V130VgtCgtT5757B.1.4270.002878
S130V130VgtCgtT5555B.1.1.3180.016596
S130V130VgtCgtT5454AY.140.004753
S130V130VgtCgtT5454P.10.000851
S130V130VgtCgtT5353AY.1200.00197
S130V130VgtCgtT5050AY.30.000497
S130V130IGtcAtc4748All0.000009
S130V130IGtCAtT148All0
S130V130VgtCgtT4143AY.390.001013
S130V130VgtCgtA243AY.390.000049
S130V130AgTcgCc3939All0.000007
S130V130delGTC---3939AY.40.000061
S130V130FGtcTtc3131B.1.617.20.000117
S130V130VgtCgtT2929AY.4.20.000629
S130V130VgtCgtT2929C.71
S130V130FGtcTtc2828B.1.1.70.000025
S130V130VgtCgtT2727B.1.6370.001973
S130V130VgtCgtT2626AY.270.001683
S130V130VgtCgtT2626AY.470.000809
S130V130delGTC---2626B.1.1.70.000023
S130V130VgtCgtT2626B.1.1600.000811
S130V130VgtCgtT2525D.20.001876
S130V130VgtCgtT2424C.370.002786
S130V130VgtCgtT2323AA.20.176923
S130V130VgtCgtT2323AY.1000.001058
S130V130VgtCgtT2223AY.360.003261
S130V130VgtCgtA123AY.360.000148
S130V130VgtCgtT2323AY.50.000475
S130V130VgtCgtT2323B.1.1.4160.020814
S130V130VgtCgtT2323B.1.177.770.016703
S130V130VgtCgtT2222B.1.351.20.006657
S130V130VgtCgtT2222B.1.4290.000518
S130V130VgtCgtT2121AY.1190.000741
S130V130LGtcCtc2121B.1.1.70.000019
S130V130delGTC---2020AY.250.00012
S130V130delGTC---2020AY.440.000122
S130V130VgtCgtT2020AY.750.00112
S130V130VgtCgtT2020B.1.5260.00047
S130V130LGtcCtc1818AY.30.000179
S130V130IGtcAtc1818AY.40.000028
S130V130VgtCgtT1818AY.98.10.000872
S130V130VgtCgtT1617AY.260.000453
S130V130VgtCgtG117AY.260.000028
S130V130delGTC---1616AY.1020.000424
S130V130VgtCgtT1416B.1.3510.000416
S130V130VgtCgtA216B.1.3510.000059
S130V130VgtCgtT1515AY.1100.00169
S130V130FGtcTtc1515AY.200.000583
S130V130delGTC---1515AY.4.20.000325
S130V130VgtCgtT1515B.1.177.570.004215
S130V130VgtCgtT1515B.1.2580.000998
S130V130VgtCgtT1515Q.10.001895
S130V130VgtCgtT1314AY.230.000907
S130V130VgtCgtA114AY.230.00007
S130V130FGtcTtc1414AY.430.000062
S130V130VgtCgtT1414B.1.3960.00988
S130V130delGTC---1313AY.34.10.006629
S130V130VgtCgtT1313AY.460.001353
S130V130VgtCgtT1313B.1.2390.015873
S130V130VgtCgtT1212AY.116.10.003737
S130V130VgtCgtT1112AY.200.000428
S130V130VgtCgtA112AY.200.000039
S130V130FGtcTtc1111AY.1030.000068
S130V130VgtCgtT1111AY.670.005107
S130V130VgtCgtT1011B.1.1.280.003112
S130V130VgtCgtG111B.1.1.280.000311
S130V130VgtCgtT1111B.1.2340.001451
S130V130VgtCgtT1111B.1.6210.000974
S130V130VgtCgtT1010AH.30.038023
S130V130GgTcgGc1010All0.000002
S130V130VgtCgtT1010AY.1180.000626
S130V130FGtcTtc1010AY.250.00006
S130V130delGTC---1010AY.90.000676
S130V130VgtCgtT1010B.1.177.860.001835
S130V130VgtCgtT89AY.330.000534
S130V130VgtCgtG19AY.330.000067
S130V130VgtCgtT99AY.420.000362
S130V130VgtCgtT99AY.75.10.001623
S130V130VgtCgtT99AY.940.003984
S130V130VgtCgtT79B.1.2210.000497
S130V130LGtcCtc79B.1.2210.000497
S130V130VgtCgtA29B.1.2210.000142
S130V130LGtCTtA19B.1.2210.000071
S130V130LGtCCtA19B.1.2210.000071
S130V130VgtCgtT78AY.290.00011
S130V130VgtCgtA18AY.290.000016
S130V130FGtcTtc88AY.30.00008
S130V130VgtCgtT88AY.3.10.000682
S130V130VgtCgtT88AY.980.000632
S130V130FGtcTtc88B.1.20.00007
S130V130AgTcgCc88B.1.2580.000532
S130V130VgtCgtT88B.1.3970.038835
S130V130VgtCgtT68B.1.5250.000679
S130V130VgtCgtG28B.1.5250.000226
S130V130VgtCgtT88B.1.617.10.001032
S130V130del1gtCgt-37All0.000001
S130V130del1Gtc-tc27All0
S130V130del1gTcg-c17All0
S130V130del1GtC-tG17All0
S130V130VgtCgtT77AY.130.001127
S130V130LGtcCtc77AY.60.000288
S130V130VgtCgtT77AY.920.002011
S130V130VgtCgtT77B.1.1.3270.7
S130V130VgtCgtT77B.1.1.510.012027
S130V130LGtcCtc77B.1.1600.000218
S130V130delGTC---77B.1.1770.000092
S130V130VgtCgtT77P.20.001306
S130V130DgTcgAc66All0.000001
S130V130VgtCgtT66AN.10.12
S130V130FGtcTtc66AY.290.000095
S130V130FGtcTtc66AY.390.000148
S130V130delGTC---66AY.4.2.10.000894
S130V130delGTC---66AY.420.000241
S130V130VgtCgtT66AY.46.40.000987
S130V130VgtCgtT66AY.540.000572
S130V130delGTC---66AY.610.000629
S130V130VgtCgtT66AY.950.004566
S130V130VgtCgtT66AY.99.20.000553
S130V130AgTcgCc66B.1.1.70.000005
S130V130VgtCgtT66B.1.177.150.003785
S130V130VgtCgtT66B.1.177.210.000459
S130V130VgtCgtT66B.1.177.70.000989
S130V130VgtCgtT66B.1.177.80.004515
S130V130VgtCgtT66B.1.177.810.001136
S130V130VgtCgtT66B.1.177.90.007989
S130V130VgtCgtT66B.1.438.10.000644
S130V130VgtCgtT66P.1.170.000971
S130V130VgtCgtT66Q.80.000989
S130V130VgtCgtT55A.2.50.002495
S130V130del2gTCg--35All0.000001
S130V130del2GTC--N15All0
S130V130del2GTc--c15All0
S130V130VgtCgtT55AY.10.001979
S130V130VgtCgtT55AY.1170.000423
S130V130IGtcAtc55AY.250.00003
S130V130delGTC---55AY.30.00005
S130V130VgtCgtT55AY.450.000608
S130V130VgtCgtT55AY.46.50.000992
S130V130VgtCgtT55B0.000639
S130V130VgtCgtT55B.1.1.4030.128205
S130V130AgTcgCc55B.1.1770.000066
S130V130VgtCgtT55B.1.177.820.002387
S130V130VgtCgtT55B.1.2430.000348
S130V130VgtCgtT55B.1.3490.003574
S130V130VgtCgtT55B.1.4280.005102
S130V130VgtCgtT55B.1.6250.011765
S130V130delGTC---440.222222
S130V130LGtcCtc44AY.250.000024
S130V130delGTC---44AY.330.000267
S130V130VgtCgtT44AY.5.30.00135
S130V130VgtCgtT44AY.960.008299
S130V130delGTC---44B.10.000037
S130V130FGtcTtc44B.10.000037
S130V130VgtCgtT44B.1.1.2220.000816
S130V130VgtCgtT44B.1.1.2690.005413
S130V130IGtcAtc44B.1.1.70.000004
S130V130VgtCgtT44B.1.3590.090909
S130V130VgtCgtT44B.1.3810.03125
S130V130VgtCgtT44B.1.5800.01626
S130V130LGtcCtc44B.1.617.20.000015
S130V130VgtCgtT44P.1.140.000191
S130V130VgtCgtT44R.10.00036
S130V130LGtcCtc33A.23.10.002113
S130V130delGTC---33AY.1080.003308
S130V130VgtCgtT33AY.1140.000693
S130V130FGtcTtc33AY.1160.00086
S130V130FGtcTtc33AY.1190.000106
S130V130delGTC---33AY.1190.000106
S130V130VgtCgtT33AY.120.10.000963
S130V130IGtcAtc33AY.260.000085
S130V130FGtcTtc33AY.330.0002
S130V130VgtCgtT33AY.340.000291
S130V130delGTC---33AY.4.50.000322
S130V130IGtcAtc33AY.430.000013
S130V130delGTC---33AY.460.000312
S130V130VgtCgtT33AY.520.002443
S130V130DgTcgAc33AY.690.00056
S130V130delGTC---33AY.850.001282
S130V130FGtcTtc33AY.90.000203
S130V130delGTC---33AY.9.20.00011
S130V130LGtcCtc33B.10.000027
S130V130LGtcCtc33B.1.10.000054
S130V130delGTC---33B.1.10.000054
S130V130VgtCgtT33B.1.1.3170.001235
S130V130VgtCgtT33B.1.1.4090.008499
S130V130VgtCgtT33B.1.1.4320.003797
S130V130VgtCgtT33B.1.1.700.001023
S130V130LGtcCtc33B.1.1770.00004
S130V130VgtCgtT33B.1.177.120.000455
S130V130VgtCgtT33B.1.177.40.000633
S130V130VgtCgtT33B.1.258.170.000312
S130V130VgtCgtT33B.1.3670.002377
S130V130VgtCgtT33B.1.4260.003027
S130V130VgtCgtT33B.1.4560.009804
S130V130VgtCgtT33B.1.4780.035294
S130V130VgtCgtT33B.1.4990.003151
S130V130VgtCgtT33B.1.5580.013699
S130V130VgtCgtT33B.1.5640.001278
S130V130VgtCgtT33B.1.5950.000783
S130V130VgtCgtT33B.1.6090.001438
S130V130AgTcgCc33B.1.617.20.000011
S130V130VgtCgtT23P.1.10.000635
S130V130VgtCgtA13P.1.10.000318
S130V130del2gTCg--220.111111
S130V130VgtCgtT22A0.000774
S130V130VgtCgtT22A.10.000564
S130V130VgtCgtT22A.270.003311
S130V130MGtCAtG22All0
S130V130SGTCAGT22All0
S130V130delGTC---22AY.1010.000981
S130V130delGTC---22AY.1030.000012
S130V130VgtCgtT22AY.1040.003968
S130V130VgtCgtT22AY.1050.001286
S130V130VgtCgtT22AY.1110.000366
S130V130delGTC---22AY.1180.000125
S130V130delGTC---22AY.1200.000074
S130V130VgtCgtT22AY.1210.000271
S130V130AgTcgCc22AY.23.10.000835
S130V130delGTC---22AY.390.000049
S130V130AgTcgCc22AY.390.000049
S130V130VgtCgtT22AY.39.10.000079
S130V130AgTcgCc22AY.40.000003
S130V130VgtCgtT22AY.400.001929
S130V130FGtcTtc22AY.440.000012
S130V130VgtCgtT22AY.46.30.001867
S130V130VgtCgtT12AY.46.60.000072
S130V130VgtCgtG12AY.46.60.000072
S130V130IGtcAtc22AY.470.000062
S130V130delGTC---22AY.470.000062
S130V130VgtCgtT22AY.480.00093
S130V130delGTC---22AY.50.000041
S130V130FGtcTtc22AY.50.000041
S130V130VgtCgtT22AY.500.001599
S130V130VgtCgtT22AY.590.001059
S130V130VgtCgtT22AY.610.00021
S130V130VgtCgtT22AY.620.000871
S130V130delGTC---22AY.650.001066
S130V130VgtCgtT22AY.650.001066
S130V130delGTC---22AY.670.000929
S130V130delGTC---22AY.680.000547
S130V130VgtCgtT22AY.680.000547
S130V130VgtCgtA12AY.690.000187
S130V130VgtCgtT12AY.690.000187
S130V130VgtCgtT22AY.70.000392
S130V130VgtCgtT22AY.7.10.000225
S130V130VgtCgtG12AY.710.000475
S130V130VgtCgtT12AY.710.000475
S130V130delGTC---22AY.75.10.000361
S130V130VgtCgtT22AY.910.001461
S130V130VgtCgtT22AY.930.000546
S130V130delGTC---22AY.98.10.000097
S130V130delGTC---22AY.990.002099
S130V130VgtCgtT22AZ.10.001735
S130V130IGtcAtc22B.10.000018
S130V130LGtcCtc22B.1.1.1700.002494
S130V130VgtCgtT22B.1.1.250.001137
S130V130VgtCgtT22B.1.1.2770.001517
S130V130LGtcCtc22B.1.1.2840.000215
S130V130VgtCgtT22B.1.1.2910.001485
S130V130VgtCgtT22B.1.1.3060.000877
S130V130delGTC---22B.1.1.3110.000716
S130V130VgtCgtT22B.1.1.3160.00185
S130V130delGTC---22B.1.1.3180.000604
S130V130VgtCgtG22B.1.1.390.001019
S130V130IGtcAtc22B.1.177.320.002699
S130V130LGtCTtA12B.1.20.000009
S130V130LGtcCtc12B.1.20.000009
S130V130VgtCgtT22B.1.2400.000431
S130V130VgtCgtT22B.1.2790.001027
S130V130VgtCgtT22B.1.3050.004301
S130V130VgtCgtT22B.1.36.290.001035
S130V130VgtCgtT22B.1.36.370.005556
S130V130AgTcgCc22B.1.4270.000101
S130V130delGTC---22B.1.4290.000047
S130V130VgtCgtT22B.1.4590.008163
S130V130VgtCgtT22B.1.466.20.000782
S130V130delGTC---22B.1.5250.000226
S130V130LGtcCtc22B.1.5260.000047
S130V130VgtCgtT22B.1.5460.007407
S130V130VgtCgtT22B.1.5740.004301
S130V130VgtCgtT22C.36.30.001134
S130V130delGTC---22P.1.150.000465
S130V130VgtCgtT22P.1.150.000465
S130V130VgtCgtT22P.1.60.003891
S130V130VgtCgtT22P.1.70.000639
S130V130GgTcgGc11A.20.000662
S130V130VgtCgtT11AD.20.000219
S130V130QGTCCAA11All0
S130V130NGTcAAc11All0
S130V130VgtCgtT11AP.10.001502
S130V130VgtCgtT11AU.20.002421
S130V130VgtCgtT11AY.100.00053
S130V130FGtcTtc11AY.1000.000046
S130V130VgtCgtT11AY.1010.00049
S130V130del1gtCgt-11AY.1010.00049
S130V130LGtcCtc11AY.1020.000027
S130V130FGtcTtc11AY.1020.000027
S130V130LGtcCtc11AY.1030.000006
S130V130MGtCAtG11AY.1030.000006
S130V130VgtCgtT11AY.1060.000335
S130V130VgtCgtT11AY.1070.000466
S130V130AgTcgCc11AY.1070.000466
S130V130delGTC---11AY.1070.000466
S130V130VgtCgtT11AY.1080.001103
S130V130delGTC---11AY.1110.000183
S130V130FGtcTtc11AY.1130.000142
S130V130FGtcTtc11AY.1170.000085
S130V130delGTC---11AY.1170.000085
S130V130AgTcgCc11AY.1200.000037
S130V130FGtcTtc11AY.1200.000037
S130V130QGTCCAA11AY.1200.000037
S130V130FGtcTtc11AY.120.10.000321
S130V130delGTC---11AY.1210.000135
S130V130LGtcCtc11AY.140.000088
S130V130del1gTcg-c11AY.160.00038
S130V130GgTcgGc11AY.160.00038
S130V130delGTC---11AY.210.001898
S130V130GgTcgGc11AY.210.001898
S130V130FGtcTtc11AY.230.00007
S130V130DgTcgAc11AY.23.10.000417
S130V130AgTcgCc11AY.250.000006
S130V130LGtcCtc11AY.290.000016
S130V130VgtCgtT11AY.300.000396
S130V130delGTC---11AY.340.000097
S130V130VgtCgtT11AY.350.000233
S130V130delGTC---11AY.360.000148
S130V130del2gTCg--11AY.390.000025
S130V130del1Gtc-tc11AY.40.000002
S130V130GgTcgGc11AY.40.000002
S130V130VgtCgtT11AY.4.2.10.000149
S130V130delGTC---11AY.4.40.000409
S130V130FGtcTtc11AY.4.40.000409
S130V130VgtCgtT11AY.4.40.000409
S130V130AgTcgCc11AY.430.000004
S130V130IGtcAtc11AY.440.000006
S130V130LGtcCtc11AY.440.000006
S130V130del1gtCgt-11AY.450.000122
S130V130FGtcTtc11AY.46.30.000934
S130V130FGtcTtc11AY.46.40.000165
S130V130LGtcCtc11AY.480.000465
S130V130LGtcCtc11AY.50.000021
S130V130IGtcAtc11AY.50.000021
S130V130VgtCgtT11AY.530.000288
S130V130delGTC---11AY.540.000095
S130V130delGTC---11AY.590.00053
S130V130VgtCgtT11AY.60.000041
S130V130delGTC---11AY.600.000938
S130V130GgTcgGc11AY.610.000105
S130V130del2GTc--c11AY.610.000105
S130V130delGTC---11AY.620.000436
S130V130VgtCgtT11AY.640.000595
S130V130delGTC---11AY.640.000595
S130V130FGtcTtc11AY.670.000464
S130V130GgTcgGc11AY.690.000187
S130V130FGtcTtc11AY.7.10.000113
S130V130VgtCgtT11AY.7.20.000559
S130V130delGTC---11AY.7.20.000559
S130V130delGTC---11AY.720.001361
S130V130VgtCgtT11AY.730.000665
S130V130delGTC---11AY.750.000056
S130V130FGtcTtc11AY.750.000056
S130V130delGTC---11AY.770.001127
S130V130VgtCgtT11AY.780.001541
S130V130VgtCgtT11AY.840.000437
S130V130delGTC---11AY.840.000437
S130V130MGtCAtG11AY.850.000427
S130V130VgtCgtT11AY.850.000427
S130V130VgtCgtT11AY.880.000884
S130V130del2GTC--N11AY.90.000068
S130V130VgtCgtT11AY.9.10.000084
S130V130LGtcCtc11AY.9.20.000037
S130V130FGtcTtc11AY.9.2.10.001976
S130V130VgtCgtT11AY.900.000684
S130V130FGtcTtc11AY.900.000684
S130V130delGTC---11AY.920.000287
S130V130delGTC---11AY.940.000443
S130V130AgTcgCc11AY.98.10.000048
S130V130FGtcTtc11AY.98.10.000048
S130V130delGTC---11AY.99.10.001553
S130V130FGtcTtc11AY.99.20.000092
S130V130delGTC---11AZ.50.003509
S130V130FGtcTtc11B0.000128
S130V130FGtcTtc11B.1.10.000018
S130V130IGtcAtc11B.1.1.1530.001095
S130V130LGtcCtc11B.1.1.1610.003534
S130V130VgtCgtT11B.1.1.2070.001182
S130V130FGtcTtc11B.1.1.2140.000055
S130V130VgtCgtT11B.1.1.2140.000055
S130V130IGtcAtc11B.1.1.2370.005405
S130V130VgtCgtT11B.1.1.2790.001121
S130V130VgtCgtT11B.1.1.2840.000107
S130V130VgtCgtT11B.1.1.2980.000862
S130V130VgtCgtT11B.1.1.3030.002762
S130V130delGTC---11B.1.1.3060.000438
S130V130VgtCgtT11B.1.1.3080.011765
S130V130VgtCgtT11B.1.1.3230.014085
S130V130VgtCgtT11B.1.1.330.000421
S130V130VgtCgtT11B.1.1.3360.016667
S130V130VgtCgtT11B.1.1.3370.003597
S130V130FGtcTtc11B.1.1.3690.000446
S130V130delGTC---11B.1.1.370.000193
S130V130VgtCgtT11B.1.1.370.000193
S130V130VgtCgtT11B.1.1.3980.003226
S130V130VgtCgtT11B.1.1.4070.041667
S130V130FGtcTtc11B.1.1.4330.001425
S130V130LGtcCtc11B.1.1.4340.000349
S130V130VgtCgtT11B.1.1.440.00241
S130V130VgtCgtT11B.1.1.500.000679
S130V130LGtcCtc11B.1.1.5230.001563
S130V130VgtCgtT11B.1.1.630.000386
S130V130GgTcgGc11B.1.1.70.000001
S130V130VgtCgtT11B.1.1270.002198
S130V130LGtcCtc11B.1.1340.005464
S130V130VgtCgtT11B.1.1390.000733
S130V130VgtCgtT11B.1.1460.004237
S130V130VgtCgtT11B.1.1570.002985
S130V130delGTC---11B.1.1600.000031
S130V130VgtCgtT11B.1.160.140.002119
S130V130LGtcCtc11B.1.160.150.00495
S130V130VgtCgtT11B.1.160.300.002976
S130V130VgtCgtT11B.1.1700.00431
S130V130FGtcTtc11B.1.1770.000013
S130V130delGTC---11B.1.177.100.000878
S130V130FGtcTtc11B.1.177.160.000664
S130V130VgtCgtT11B.1.177.160.000664
S130V130FGtcTtc11B.1.177.230.003236
S130V130VgtCgtT11B.1.177.280.007407
S130V130VgtCgtT11B.1.177.30.007634
S130V130VgtCgtT11B.1.177.310.011494
S130V130delGTC---11B.1.177.40.000211
S130V130VgtCgtT11B.1.177.440.000519
S130V130VgtCgtT11B.1.177.50.001242
S130V130delGTC---11B.1.177.510.004566
S130V130delGTC---11B.1.177.540.000606
S130V130FGtcTtc11B.1.177.560.000668
S130V130VgtCgtT11B.1.177.60.000977
S130V130VgtCgtT11B.1.177.650.000665
S130V130IGtcAtc11B.1.177.730.000566
S130V130LGtcCtc11B.1.177.860.000183
S130V130VgtCgtA11B.1.177.870.000728
S130V130VgtCgtT11B.1.1820.007246
S130V130VgtCgtT11B.1.1900.01
S130V130AgTcgCc11B.1.20.000009
S130V130delGTC---11B.1.20.000009
S130V130VgtCgtT11B.1.214.20.0006
S130V130FGtcTtc11B.1.2210.000071
S130V130SGTCAGT11B.1.2210.000071
S130V130DgTcgAc11B.1.2210.000071
S130V130VgtCgtT11B.1.2220.001692
S130V130AgTcgCc11B.1.2430.00007
S130V130LGtcCtc11B.1.2430.00007
S130V130VgtCgtA11B.1.258.110.000396
S130V130VgtCgtT11B.1.2640.012346
S130V130VgtCgtT11B.1.2650.001271
S130V130VgtCgtG11B.1.3110.000275
S130V130VgtCgtT11B.1.3550.011111
S130V130VgtCgtT11B.1.36.160.001425
S130V130VgtCgtT11B.1.36.180.00042
S130V130VgtCgtT11B.1.36.210.00216
S130V130VgtCgtT11B.1.36.220.001208
S130V130VgtCgtT11B.1.36.310.001751
S130V130VgtCgtT11B.1.3610.001289
S130V130VgtCgtT11B.1.3620.001541
S130V130VgtCgtT11B.1.3770.004566
S130V130VgtCgtT11B.1.3850.010638
S130V130VgtCgtT11B.1.3910.001127
S130V130FGtcTtc11B.1.3960.000706
S130V130GgTcgGc11B.1.4270.00005
S130V130SGTCAGT11B.1.4290.000024
S130V130IGtcAtc11B.1.4700.001404
S130V130VgtCgtT11B.1.4970.000315
S130V130VgtCgtT11B.1.5380.008065
S130V130VgtCgtT11B.1.5670.003333
S130V130LGtcCtc11B.1.5680.001111
S130V130LGtcCtc11B.1.5750.000303
S130V130VgtCgtT11B.1.575.10.002439
S130V130VgtCgtT11B.1.5760.000907
S130V130VgtCgtT11B.1.5820.000491
S130V130IGtCAtT11B.1.5850.027778
S130V130VgtCgtT11B.1.5870.001898
S130V130VgtCgtT11B.1.595.20.04
S130V130IGtcAtc11B.1.5960.000087
S130V130FGtcTtc11B.1.617.10.000129
S130V130IGtcAtc11B.1.617.10.000129
S130V130del1Gtc-tc11B.1.617.10.000129
S130V130del1GtC-tG11B.1.617.20.000004
S130V130NGTcAAc11B.1.617.20.000004
S130V130delGTC---11B.1.6200.000946
S130V130delGTC---11B.1.6210.000089
S130V130VgtCgtT11B.1.621.10.000506
S130V130VgtCgtT11B.1.6230.000536
S130V130FGtcTtc11B.1.6270.00202
S130V130VgtCgtT11B.1.6360.006711
S130V130FGtcTtc11B.1.6370.000073
S130V130VgtCgtT11B.30.000831
S130V130VgtCgtT11B.340.013699
S130V130delGTC---11B.340.013699
S130V130VgtCgtT11B.40.002208
S130V130del1gtCgt-11B.40.002208
S130V130VgtCgtT11B.400.000364
S130V130VgtCgtA11B.6.60.000889
S130V130VgtCgtT11C.140.004329
S130V130VgtCgtT11C.300.001727
S130V130delGTC---11C.36.30.000567
S130V130AgTcgCc11D.20.000075
S130V130LGtcCtc11D.20.000075
S130V130VgtCgtT11N.30.005814
S130V130AgTcgCc11P.10.000016
S130V130LGtCTtA11P.1.10.000318
S130V130GgTcgGc11P.1.10.000318
S130V130FGtcTtc11P.1.10.000318
S130V130VgtCgtT11P.1.120.000484
S130V130FGtcTtc11P.1.140.000048
S130V130VgtCgtT11Q.20.000613
S130V130FGtcTtc11Q.80.000165
S130V130FGtcTtc11R.10.00009
S130V130GgTcgGc11R.10.00009
S130V130delGTC---11R.10.00009
S130V130DgTcgAc11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.