CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1263

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1263P1263LnonsyncCacTa718971690.99721825349-25351
S1263P1263LnonsynCCaTTa718990.0012519125349-25351
S1263P1263LnonsyncCAcTC718960.00083460825349-25351
S1263P1263LnonsynCCATTG718930.00041730425349-25351
S1263P1263LnonsyncCAcTT718920.00027820325349-25351
S1263P1263PsynccAccG12028210.68302825349-25351
S1263P1263PsynccAccC12022530.21048325349-25351
S1263P1263PsynccAccT12021280.10648925349-25351
S1263P1263RnonsyncCacGa9819630.98165125349-25351
S1263P1263RnonsynCCaAGa981100.010193725349-25351
S1263P1263RnonsynCCAAGG98130.003058125349-25351
S1263P1263RnonsyncCAcGG98130.003058125349-25351
S1263P1263RnonsyncCAcGT98110.0010193725349-25351
S1263P1263RnonsyncCAcGC98110.0010193725349-25351
S1263P1263SnonsynCcaTca6186110.98867325349-25351
S1263P1263SnonsynCcATcT61830.0048543725349-25351
S1263P1263SnonsynCcATcC61820.0032362525349-25351
S1263P1263SnonsynCcATcG61810.0016181225349-25351
S1263P1263SnonsynCCAAGC61810.0016181225349-25351
S1263P1263QnonsyncCacAa3623530.97513825349-25351
S1263P1263QnonsyncCAcAG36290.024861925349-25351
S1263P1263TnonsynCcaAca2442370.97131125349-25351
S1263P1263TnonsynCcAAcG24440.016393425349-25351
S1263P1263TnonsynCcAAcC24420.0081967225349-25351
S1263P1263TnonsynCcAAcT24410.0040983625349-25351
S1263P1263deldelCCA---155155125349-25351
S1263P1263AnonsynCcaGca55460.83636425349-25351
S1263P1263AnonsynCcAGcG5540.072727325349-25351
S1263P1263AnonsynCcAGcT5530.054545525349-25351
S1263P1263AnonsynCcAGcC5520.036363625349-25351
S1263P1263EnonsynCCaGAa17130.76470625349-25351
S1263P1263EnonsynCCAGAG1740.23529425349-25351
S1263P1263XnonsynCCaTGa1490.64285725349-25351
S1263P1263XnonsynCCaTAa1450.35714325349-25351
S1263P1263KnonsynCCaAAa13100.76923125349-25351
S1263P1263KnonsynCCAAAG1330.23076925349-25351
S1263P1263InonsynCCaATa11100.90909125349-25351
S1263P1263InonsynCCAATT1110.090909125349-25351
S1263P1263GnonsynCCaGGa1070.725349-25351
S1263P1263GnonsynCCAGGG1020.225349-25351
S1263P1263GnonsynCCAGGT1010.125349-25351
S1263P1263VnonsynCCaGTa870.87525349-25351
S1263P1263del2delCCa--a830.37525349-25351
S1263P1263del2delcCAc--830.37525349-25351
S1263P1263VnonsynCCAGTT810.12525349-25351
S1263P1263del2delCCA--N810.12525349-25351
S1263P1263del2delCCA--G810.12525349-25351
S1263P1263HnonsyncCAcAT530.625349-25351
S1263P1263HnonsyncCAcAC520.425349-25351
S1263P1263FnonsynCCATTT44125349-25351
S1263P1263DnonsynCCAGAC320.66666725349-25351
S1263P1263DnonsynCCAGAT310.33333325349-25351
S1263P1263del1delCca-ca22125349-25351
S1263P1263YnonsynCCATAC210.525349-25351
S1263P1263NnonsynCCAAAT210.525349-25351
S1263P1263NnonsynCCAAAC210.525349-25351
S1263P1263YnonsynCCATAT210.525349-25351
S1263P1263WnonsynCCATGG11125349-25351
S1263P1263CnonsynCCATGC11125349-25351
S1263P1263MnonsynCCAATG11125349-25351

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1263P1263LcCacTa71697189All0.001371
S1263P1263LCCaTTa97189All0.000002
S1263P1263LcCAcTC67189All0.000001
S1263P1263LCCATTG37189All0.000001
S1263P1263LcCAcTT27189All0
S1263P1263PccAccG8211202All0.000157
S1263P1263PccAccC2531202All0.000048
S1263P1263PccAccT1281202All0.000024
S1263P1263LcCacTa11381138B.1.1.70.001019
S1263P1263RcCacGa963981All0.000184
S1263P1263RCCaAGa10981All0.000002
S1263P1263RcCAcGG3981All0.000001
S1263P1263RCCAAGG3981All0.000001
S1263P1263RcCAcGC1981All0
S1263P1263RcCAcGT1981All0
S1263P1263LcCacTa924924AY.40.001438
S1263P1263LcCacTa807812B.10.007392
S1263P1263LCCaTTa5812B.10.000046
S1263P1263PccAccG654661AY.250.003934
S1263P1263PccAccT7661AY.250.000042
S1263P1263SCcaTca611618All0.000117
S1263P1263SCcATcT3618All0.000001
S1263P1263SCcATcC2618All0
S1263P1263SCcATcG1618All0
S1263P1263SCCAAGC1618All0
S1263P1263RcCacGa569569B.1.1.70.000509
S1263P1263LcCacTa464467B.1.617.20.001747
S1263P1263LCCaTTa2467B.1.617.20.000008
S1263P1263LcCAcTT1467B.1.617.20.000004
S1263P1263QcCacAa353362All0.000068
S1263P1263QcCAcAG9362All0.000002
S1263P1263LcCacTa353353AY.250.002123
S1263P1263RcCacGa253253AY.40.000394
S1263P1263TCcaAca237244All0.000045
S1263P1263TCcAAcG4244All0.000001
S1263P1263TCcAAcC2244All0
S1263P1263TCcAAcT1244All0
S1263P1263LcCacTa218219AY.440.001327
S1263P1263LCCATTG1219AY.440.000006
S1263P1263LcCacTa196196AY.430.000868
S1263P1263LcCacTa176176AY.60.007239
S1263P1263LcCacTa170171B.1.4290.004
S1263P1263LcCAcTT1171B.1.4290.000024
S1263P1263delCCA---155155All0.00003
S1263P1263LcCacTa143143AY.34.10.072922
S1263P1263SCcaTca130130AY.440.000791
S1263P1263PccAccC113128AY.40.000176
S1263P1263PccAccG12128AY.40.000019
S1263P1263PccAccT3128AY.40.000005
S1263P1263LcCacTa122122AY.1030.000758
S1263P1263PccAccC78111B.1.1.70.00007
S1263P1263PccAccG20111B.1.1.70.000018
S1263P1263PccAccT13111B.1.1.70.000012
S1263P1263QcCacAa103103B.1.1.70.000092
S1263P1263LcCacTa103103B.1.20.000907
S1263P1263LcCacTa102102P.10.001607
S1263P1263QcCacAa9797AY.40.000151
S1263P1263LcCacTa9696AY.30.000955
S1263P1263LcCacTa9595AY.390.002348
S1263P1263SCcaTca9292B.1.1.70.000082
S1263P1263SCcaTca9090AY.1180.005638
S1263P1263TCcaAca8989B.1.36.20.956989
S1263P1263LcCacTa8888AY.1020.002333
S1263P1263LcCacTa7070B.1.1770.000922
S1263P1263LcCacTa6767P.1.170.010838
S1263P1263LcCacTa6666AY.360.009782
S1263P1263LcCacTa6666B.1.1.5190.002621
S1263P1263LcCacTa6666B.1.5521
S1263P1263LcCacTa6060B.1.3510.001784
S1263P1263LcCacTa5757AY.39.10.002258
S1263P1263ACcaGca4655All0.000009
S1263P1263ACcAGcG455All0.000001
S1263P1263ACcAGcT355All0.000001
S1263P1263ACcAGcC255All0
S1263P1263delCCA---5555B.1.1.70.000049
S1263P1263LcCacTa5353B.1.10.000961
S1263P1263LcCacTa5050B.1.1.3690.022311
S1263P1263LcCacTa4949AY.260.001387
S1263P1263LcCacTa4949B.1.5250.005545
S1263P1263SCcaTca4545AY.470.0014
S1263P1263LcCacTa4343AY.750.002409
S1263P1263LcCacTa4141AY.330.002738
S1263P1263SCcaTca4040AY.30.000398
S1263P1263TCcaAca3036B.10.000275
S1263P1263TCcAAcG436B.10.000037
S1263P1263TCcAAcC236B.10.000018
S1263P1263LcCacTa3434P.1.10.010801
S1263P1263TCcaAca3333B.1.177.40.006965
S1263P1263LcCacTa3232AY.1190.00113
S1263P1263LcCacTa3232B.1.5260.000752
S1263P1263PccAccG1431B.1.617.20.000053
S1263P1263PccAccT1431B.1.617.20.000053
S1263P1263PccAccC331B.1.617.20.000011
S1263P1263SCcaTca3030AY.40.000047
S1263P1263LcCacTa3030B.1.1600.000936
S1263P1263LcCacTa2727AY.1210.003654
S1263P1263ACcaGca2127B.10.000192
S1263P1263RcCacGa1227B.10.00011
S1263P1263RCCaAGa827B.10.000073
S1263P1263ACcAGcG427B.10.000037
S1263P1263RCCAAGG327B.10.000027
S1263P1263RcCAcGG327B.10.000027
S1263P1263ACcAGcC227B.10.000018
S1263P1263RcCAcGC127B.10.000009
S1263P1263LcCacTa2727B.1.1.2840.0029
S1263P1263LcCacTa2626B.1.2430.001809
S1263P1263LcCacTa2626B.1.438.10.002789
S1263P1263LcCacTa2626Q.20.015951
S1263P1263SCcaTca2125B.10.000192
S1263P1263SCcATcC225B.10.000018
S1263P1263SCCAAGC125B.10.000009
S1263P1263SCcATcG125B.10.000009
S1263P1263LcCacTa2323AY.200.000894
S1263P1263LcCacTa2323AY.290.000363
S1263P1263RcCacGa2323B.1.1770.000303
S1263P1263LcCacTa2222AY.4.20.000477
S1263P1263LcCacTa2222AY.420.000885
S1263P1263LcCacTa2222AY.470.000684
S1263P1263LcCacTa2121B.1.2580.001397
S1263P1263delCCA---1919AY.4.50.002042
S1263P1263PccAccT1219AY.430.000053
S1263P1263PccAccC419AY.430.000018
S1263P1263PccAccG319AY.430.000013
S1263P1263RcCacGa1919B.1.36.90.061093
S1263P1263LcCacTa1919B.1.4270.000959
S1263P1263QcCacAa1818AY.1020.000477
S1263P1263LcCacTa1818AY.1200.000669
S1263P1263LcCacTa1818AY.4.50.001935
S1263P1263LcCacTa1818AY.740.002082
S1263P1263QcCacAa1418B.10.000128
S1263P1263QcCAcAG418B.10.000037
S1263P1263TCcaAca1718B.1.1.70.000015
S1263P1263TCcAAcT118B.1.1.70.000001
S1263P1263RcCacGa1818B.1.5260.000423
S1263P1263ECCaGAa1317All0.000002
S1263P1263ECCAGAG417All0.000001
S1263P1263TCcaAca1717AY.440.000103
S1263P1263PccAccT817AY.440.000049
S1263P1263PccAccG817AY.440.000049
S1263P1263PccAccC117AY.440.000006
S1263P1263PccAccG1517B.1.20.000132
S1263P1263PccAccC217B.1.20.000018
S1263P1263LcCacTa1717P.20.003173
S1263P1263LcCacTa1616B.1.5960.001394
S1263P1263SCcaTca1515B.1.20.000132
S1263P1263PccAccC1515B.1.4990.015756
S1263P1263SCcaTca1315B.1.617.20.000049
S1263P1263SCcATcT215B.1.617.20.000008
S1263P1263XCCaTGa914All0.000002
S1263P1263XCCaTAa514All0.000001
S1263P1263RcCacGa1414AY.440.000085
S1263P1263ECCaGAa1014B.10.000092
S1263P1263ECCAGAG414B.10.000037
S1263P1263LcCacTa1414B.1.258.170.001456
S1263P1263KCCaAAa1013All0.000002
S1263P1263KCCAAAG313All0.000001
S1263P1263QcCacAa1313AY.250.000078
S1263P1263PccAccG813AY.30.00008
S1263P1263PccAccC313AY.30.00003
S1263P1263PccAccT213AY.30.00002
S1263P1263LcCacTa1313AY.450.001582
S1263P1263LcCacTa1313AY.550.011927
S1263P1263QcCacAa1313B.1.617.20.000049
S1263P1263LcCacTa1313C.370.001509
S1263P1263LcCacTa1212AY.1130.001709
S1263P1263LcCacTa1212AY.230.000837
S1263P1263LcCacTa1212AY.50.000248
S1263P1263LcCacTa1212AY.9.20.000441
S1263P1263LcCacTa1212B.1.5510.015484
S1263P1263LcCacTa1212B.1.617.10.001548
S1263P1263ICCaATa1011All0.000002
S1263P1263ICCAATT111All0
S1263P1263LcCacTa1111AY.1000.000506
S1263P1263LcCacTa1111AY.1180.000689
S1263P1263SCcaTca1111AY.430.000049
S1263P1263LcCacTa1111AY.610.001153
S1263P1263XCCaTGa811B.10.000073
S1263P1263PccAccG611B.10.000055
S1263P1263PccAccC411B.10.000037
S1263P1263XCCaTAa311B.10.000027
S1263P1263PccAccT111B.10.000009
S1263P1263delCCA---1111B.1.1770.000145
S1263P1263LcCacTa1111B.1.177.600.002403
S1263P1263QcCacAa1111B.1.20.000097
S1263P1263RcCacGa1111B.1.258.170.001144
S1263P1263LcCacTa1111P.60.034591
S1263P1263GCCaGGa710All0.000001
S1263P1263GCCAGGG210All0
S1263P1263GCCAGGT110All0
S1263P1263LcCacTa1010AY.1070.00466
S1263P1263LcCacTa1010B.1.2210.00071
S1263P1263LcCacTa1010B.1.6370.000731
S1263P1263SCcaTca99AY.1000.000414
S1263P1263PccAccC59AY.1030.000031
S1263P1263PccAccG39AY.1030.000019
S1263P1263PccAccT19AY.1030.000006
S1263P1263PccAccG89AY.230.000558
S1263P1263PccAccC19AY.230.00007
S1263P1263PccAccG69AY.390.000148
S1263P1263PccAccT39AY.390.000074
S1263P1263LcCacTa99AY.980.000711
S1263P1263delCCA---99B.1.1.1890.013616
S1263P1263LcCacTa99B.1.1.2310.027864
S1263P1263SCcaTca99B.1.1770.000119
S1263P1263LcCacTa99B.1.5750.002731
S1263P1263LcCacTa99B.1.6210.000797
S1263P1263LcCacTa99C.36.30.005105
S1263P1263VCCaGTa78All0.000001
S1263P1263del2CCa--a38All0.000001
S1263P1263del2cCAc--38All0.000001
S1263P1263VCCAGTT18All0
S1263P1263del2CCA--N18All0
S1263P1263del2CCA--G18All0
S1263P1263LcCacTa88AY.20.002849
S1263P1263QcCacAa88AY.470.000249
S1263P1263LcCacTa88AY.880.007073
S1263P1263SCcaTca88AY.98.10.000387
S1263P1263KCCaAAa58B.10.000046
S1263P1263KCCAAAG38B.10.000027
S1263P1263LcCacTa88B.1.1.2140.000444
S1263P1263LcCacTa88B.1.6250.018824
S1263P1263PccAccG57AY.1020.000133
S1263P1263PccAccT27AY.1020.000053
S1263P1263LcCacTa77AY.1170.000592
S1263P1263QcCacAa77AY.390.000173
S1263P1263TCcaAca77AY.40.000011
S1263P1263LcCacTa77AY.98.10.000339
S1263P1263LcCacTa77B0.000895
S1263P1263GCCaGGa57B.10.000046
S1263P1263GCCAGGG27B.10.000018
S1263P1263PccAccC77B.1.1.4480.014228
S1263P1263LcCacTa77B.1.351.30.006135
S1263P1263LcCacTa77B.1.466.20.002739
S1263P1263PccAccT77B.1.5260.000165
S1263P1263RcCacGa77B.1.617.20.000026
S1263P1263LcCAcTC67B.1.6190.005226
S1263P1263LcCacTa17B.1.6190.000871
S1263P1263PccAccG77P.10.00011
S1263P1263RcCacGa77Q.10.000884
S1263P1263SCcaTca66AY.200.000233
S1263P1263LcCacTa66AY.340.000582
S1263P1263QcCacAa66AY.440.000037
S1263P1263LcCacTa66AY.70.001176
S1263P1263SCcaTca66B0.000767
S1263P1263RcCacGa66B.1.10.000109
S1263P1263QcCacAa66B.1.10.000109
S1263P1263PccAccG46B.1.10.000073
S1263P1263PccAccT26B.1.10.000036
S1263P1263ACcaGca66B.1.1.70.000005
S1263P1263PccAccT66B.1.1.700.002046
S1263P1263LcCacTa66B.1.177.40.001266
S1263P1263LcCacTa66B.1.3620.009245
S1263P1263PccAccC66B.1.499.10.666667
S1263P1263TCcaAca66B.1.617.20.000023
S1263P1263LcCacTa66P.1.140.000287
S1263P1263SCcaTca66P.20.00112
S1263P1263LcCacTa55A.10.001409
S1263P1263LcCacTa55A.280.013228
S1263P1263HcCAcAT35All0.000001
S1263P1263HcCAcAC25All0
S1263P1263SCcaTca55AY.1030.000031
S1263P1263PccAccG55AY.1190.000177
S1263P1263LcCacTa55AY.130.000805
S1263P1263SCcaTca55AY.250.00003
S1263P1263delCCA---55AY.250.00003
S1263P1263PccAccC25AY.260.000057
S1263P1263PccAccG25AY.260.000057
S1263P1263PccAccT15AY.260.000028
S1263P1263LcCacTa55AY.3.10.000426
S1263P1263PccAccT55AY.460.00052
S1263P1263LcCacTa55AY.460.00052
S1263P1263SCcaTca55AY.5.40.001384
S1263P1263LcCacTa55AY.7.10.000564
S1263P1263LcCacTa55AY.700.001043
S1263P1263LcCacTa55AY.720.006803
S1263P1263LcCacTa55AY.840.002187
S1263P1263LcCacTa55AY.9.10.000419
S1263P1263LcCacTa55AY.99.20.000461
S1263P1263ICCaATa55B.10.000046
S1263P1263LcCacTa55B.1.1.4330.007123
S1263P1263RcCacGa55B.1.1.5190.000199
S1263P1263LcCacTa55B.1.1.560.089286
S1263P1263TCcaAca55B.1.1770.000066
S1263P1263LcCacTa55B.1.360.00073
S1263P1263LcCacTa55B.1.36.290.002587
S1263P1263LcCacTa55B.1.4150.071429
S1263P1263PccAccG35B.1.617.10.000387
S1263P1263PccAccT25B.1.617.10.000258
S1263P1263QcCacAa55B.1.6210.000443
S1263P1263LcCacTa55C.230.02907
S1263P1263LcCacTa55D.20.000375
S1263P1263LcCacTa55P.1.150.001162
S1263P1263LcCacTa55Q.10.000632
S1263P1263FCCATTT44All0.000001
S1263P1263LcCacTa44AY.1160.001147
S1263P1263LcCacTa44AY.140.000352
S1263P1263PccAccG44AY.240.001724
S1263P1263PccAccT44AY.290.000063
S1263P1263PccAccT24AY.330.000134
S1263P1263PccAccG24AY.330.000134
S1263P1263LcCacTa44AY.370.001264
S1263P1263delCCA---44AY.40.000006
S1263P1263TCcaAca44AY.430.000018
S1263P1263PccAccG34AY.450.000365
S1263P1263PccAccC14AY.450.000122
S1263P1263LCCATTG24AY.46.20.001271
S1263P1263LcCacTa24AY.46.20.001271
S1263P1263PccAccG44AY.5.30.00135
S1263P1263LcCacTa44AY.540.000381
S1263P1263QcCacAa44AY.650.002132
S1263P1263LcCacTa44AY.75.10.000721
S1263P1263PccAccT44AY.98.10.000194
S1263P1263SCcaTca44B.1.10.000073
S1263P1263ACcaGca44B.1.10.000073
S1263P1263LcCacTa44B.1.177.120.000607
S1263P1263SCcaTca44B.1.177.80.00301
S1263P1263LcCacTa44B.1.177.860.000734
S1263P1263QcCacAa44B.1.2400.000862
S1263P1263LcCacTa44B.1.2400.000862
S1263P1263LcCacTa44B.1.3340.072727
S1263P1263delCCA---44B.1.617.20.000015
S1263P1263SCcaTca330.166667
S1263P1263LcCacTa33AE.80.001467
S1263P1263DCCAGAC23All0
S1263P1263DCCAGAT13All0
S1263P1263SCcaTca33AY.1020.00008
S1263P1263LcCacTa33AY.1080.003308
S1263P1263PccAccT33AY.1170.000254
S1263P1263LcCacTa33AY.120.10.000963
S1263P1263LcCacTa33AY.16.10.00141
S1263P1263PccAccG33AY.200.000117
S1263P1263LcCacTa33AY.270.000194
S1263P1263SCcaTca33AY.4.20.000065
S1263P1263LcCacTa33AY.46.50.000595
S1263P1263PccAccG33AY.820.004071
S1263P1263LcCacTa33AY.860.00249
S1263P1263LcCacTa33AY.920.000862
S1263P1263VCCaGTa33B.10.000027
S1263P1263delCCA---33B.1.10.000054
S1263P1263LcCacTa33B.1.1.2070.003546
S1263P1263LcCacTa33B.1.1.2790.003363
S1263P1263SCcaTca33B.1.1.2940.003797
S1263P1263LcCacTa33B.1.1.3620.016854
S1263P1263LcCacTa33B.1.1.370.000579
S1263P1263LcCacTa33B.1.1.4320.003797
S1263P1263LcCacTa33B.1.1.4340.001046
S1263P1263LcCacTa33B.1.1.630.001157
S1263P1263KCCaAAa33B.1.1.70.000003
S1263P1263LcCacTa33B.1.1390.002199
S1263P1263LcCacTa33B.1.1420.008696
S1263P1263ACcaGca33B.1.1770.00004
S1263P1263PccAccT23B.1.1770.000026
S1263P1263PccAccC13B.1.1770.000013
S1263P1263SCcaTca33B.1.177.200.004552
S1263P1263delCCA---33B.1.177.40.000633
S1263P1263TCcaAca33B.1.177.530.007177
S1263P1263PccAccT33B.1.2210.000213
S1263P1263LcCacTa33B.1.36.170.001482
S1263P1263PccAccT33B.1.438.10.000322
S1263P1263LcCacTa33B.1.5680.003333
S1263P1263QcCacAa33B.1.5950.000783
S1263P1263SCcaTca33B.1.617.10.000387
S1263P1263TCcaAca33C.370.000348
S1263P1263QcCAcAG33C.380.024194
S1263P1263LcCacTa33P.1.100.000808
S1263P1263LcCacTa33P.1.20.003468
S1263P1263QcCacAa33P.1.70.000958
S1263P1263LcCacTa33W.10.026087
S1263P1263ACcaGca220.111111
S1263P1263LcCacTa22AD.20.000438
S1263P1263del1Cca-ca22All0
S1263P1263NCCAAAT12All0
S1263P1263NCCAAAC12All0
S1263P1263YCCATAC12All0
S1263P1263YCCATAT12All0
S1263P1263RcCacGa22AY.10.000791
S1263P1263RcCacGa22AY.1030.000012
S1263P1263QcCacAa22AY.1030.000012
S1263P1263LcCacTa22AY.1060.00067
S1263P1263PccAccC12AY.1130.000142
S1263P1263PccAccG12AY.1130.000142
S1263P1263LcCacTa22AY.1150.010417
S1263P1263PccAccG22AY.1180.000125
S1263P1263QcCacAa22AY.1190.000071
S1263P1263delCCA---22AY.1200.000074
S1263P1263LcCacTa22AY.160.000759
S1263P1263GCCAGGT12AY.20.000356
S1263P1263ACcaGca12AY.20.000356
S1263P1263RcCAcGT12AY.20.000356
S1263P1263RcCacGa12AY.20.000356
S1263P1263GCCaGGa12AY.20.000356
S1263P1263ACcAGcT12AY.20.000356
S1263P1263SCcaTca22AY.360.000296
S1263P1263del2cCAc--22AY.40.000003
S1263P1263QcCacAa22AY.430.000009
S1263P1263QcCacAa22AY.450.000243
S1263P1263SCcaTca22AY.450.000243
S1263P1263FCCATTT22AY.46.20.001271
S1263P1263SCcaTca22AY.46.50.000397
S1263P1263LcCacTa22AY.46.60.000144
S1263P1263PccAccT22AY.470.000062
S1263P1263SCcaTca22AY.50.000041
S1263P1263LcCacTa22AY.5.40.000553
S1263P1263LcCacTa22AY.510.001818
S1263P1263LcCacTa22AY.620.000871
S1263P1263LcCacTa22AY.640.00119
S1263P1263PccAccG22AY.650.001066
S1263P1263LcCacTa22AY.650.001066
S1263P1263QcCacAa22AY.740.000231
S1263P1263LcCacTa22AY.990.002099
S1263P1263LcCacTa22AZ.40.006711
S1263P1263HcCAcAC22B.10.000018
S1263P1263DCCAGAC22B.10.000018
S1263P1263delCCA---22B.10.000018
S1263P1263ECCaGAa22B.1.10.000036
S1263P1263TCcaAca22B.1.10.000036
S1263P1263LcCacTa22B.1.1.1130.013986
S1263P1263LcCacTa22B.1.1.30.017391
S1263P1263LcCacTa22B.1.1.3180.000604
S1263P1263PccAccG22B.1.1.390.001019
S1263P1263LcCacTa12B.1.1.4090.002833
S1263P1263LCCaTTa12B.1.1.4090.002833
S1263P1263QcCacAa22B.1.1.5190.000079
S1263P1263ICCaATa22B.1.1.70.000002
S1263P1263PccAccT22B.1.110.30.001437
S1263P1263LcCacTa22B.1.1470.001512
S1263P1263QcCacAa22B.1.1770.000026
S1263P1263QcCacAa22B.1.177.110.003396
S1263P1263delCCA---22B.1.177.160.001329
S1263P1263LcCacTa22B.1.177.200.003035
S1263P1263delCCA---22B.1.177.540.001213
S1263P1263LcCacTa22B.1.177.570.000562
S1263P1263RcCacGa12B.1.177.730.000566
S1263P1263RCCaAGa12B.1.177.730.000566
S1263P1263LcCacTa22B.1.177.820.000955
S1263P1263LcCacTa22B.1.1820.014493
S1263P1263ACcaGca22B.1.2210.000142
S1263P1263SCcaTca22B.1.2210.000142
S1263P1263TCcaAca22B.1.2210.000142
S1263P1263RCCaAGa12B.1.2210.000071
S1263P1263RcCacGa12B.1.2210.000071
S1263P1263SCcaTca12B.1.2220.001692
S1263P1263SCcATcT12B.1.2220.001692
S1263P1263ACcAGcT12B.1.2220.001692
S1263P1263ACcaGca12B.1.2220.001692
S1263P1263LcCacTa22B.1.2320.001075
S1263P1263SCcaTca22B.1.258.170.000208
S1263P1263LcCacTa22B.1.2650.002541
S1263P1263SCcaTca22B.1.3510.000059
S1263P1263LcCacTa22B.1.351.20.000605
S1263P1263LcCacTa22B.1.3690.00057
S1263P1263QcCacAa22B.1.4270.000101
S1263P1263PccAccT12B.1.4290.000024
S1263P1263PccAccC12B.1.4290.000024
S1263P1263LcCacTa22B.1.4590.008163
S1263P1263LcCacTa22B.1.4740.003802
S1263P1263delCCA---22B.1.5260.000047
S1263P1263LcCacTa22B.1.5280.095238
S1263P1263LcCacTa22B.1.5950.000522
S1263P1263FCCATTT22B.1.617.20.000008
S1263P1263VCCaGTa12B.1.617.20.000004
S1263P1263ACcAGcT12B.1.617.20.000004
S1263P1263ACcaGca12B.1.617.20.000004
S1263P1263VCCAGTT12B.1.617.20.000004
S1263P1263LcCacTa22B.400.000729
S1263P1263LcCacTa22B.430.028571
S1263P1263PccAccG22C.10.004785
S1263P1263LcCacTa22C.220.142857
S1263P1263SCcaTca22P.10.000032
S1263P1263LcCacTa22P.1.120.000968
S1263P1263LcCacTa22P.1.70.000639
S1263P1263SCcaTca22P.30.00319
S1263P1263LcCacTa22Q.40.00091
S1263P1263LcCacTa22Q.80.00033
S1263P1263LcCacTa22R.10.00018
S1263P1263delCCA---22U.30.007722
S1263P1263LcCacTa22W.20.009662
S1263P1263LcCacTa11A.2.50.000499
S1263P1263MCCAATG11All0
S1263P1263CCCATGC11All0
S1263P1263WCCATGG11All0
S1263P1263LcCacTa11AP.10.001502
S1263P1263QcCAcAG11AT.10.005128
S1263P1263TCcaAca11AY.1020.000027
S1263P1263RcCacGa11AY.1020.000027
S1263P1263TCcaAca11AY.1030.000006
S1263P1263LcCacTa11AY.110.001339
S1263P1263TCcaAca11AY.1100.000113
S1263P1263LcCacTa11AY.1110.000183
S1263P1263delCCA---11AY.1110.000183
S1263P1263PccAccG11AY.1140.000231
S1263P1263TCcaAca11AY.1180.000063
S1263P1263PccAccT11AY.1200.000037
S1263P1263LcCacTa11AY.120.2.10.000498
S1263P1263RcCacGa11AY.16.10.00047
S1263P1263delCCA---11AY.190.00114
S1263P1263PccAccT11AY.20.000356
S1263P1263RcCacGa11AY.200.000039
S1263P1263LcCacTa11AY.23.10.000417
S1263P1263QcCacAa11AY.240.000431
S1263P1263del2CCA--N11AY.250.000006
S1263P1263TCcaAca11AY.250.000006
S1263P1263ACcaGca11AY.250.000006
S1263P1263PccAccT11AY.270.000065
S1263P1263delCCA---11AY.290.000016
S1263P1263TCcaAca11AY.290.000016
S1263P1263LcCacTa11AY.29.10.000221
S1263P1263QcCacAa11AY.30.00001
S1263P1263TCcaAca11AY.30.00001
S1263P1263RcCacGa11AY.3.10.000085
S1263P1263PccAccC11AY.3.10.000085
S1263P1263TCcaAca11AY.3.10.000085
S1263P1263LcCacTa11AY.320.000532
S1263P1263RcCacGa11AY.320.000532
S1263P1263QcCacAa11AY.330.000067
S1263P1263PccAccG11AY.340.000097
S1263P1263del2cCAc--11AY.380.000499
S1263P1263del1Cca-ca11AY.40.000002
S1263P1263TCcaAca11AY.4.20.000022
S1263P1263PccAccG11AY.4.20.000022
S1263P1263TCcaAca11AY.4.40.000409
S1263P1263QcCacAa11AY.4.40.000409
S1263P1263LcCacTa11AY.400.000964
S1263P1263SCcaTca11AY.420.00004
S1263P1263PccAccC11AY.420.00004
S1263P1263RcCacGa11AY.420.00004
S1263P1263delCCA---11AY.430.000004
S1263P1263HcCAcAT11AY.440.000006
S1263P1263ICCAATT11AY.46.20.000635
S1263P1263MCCAATG11AY.46.20.000635
S1263P1263LcCacTa11AY.46.40.000165
S1263P1263PccAccG11AY.46.40.000165
S1263P1263LcCacTa11AY.480.000465
S1263P1263delCCA---11AY.50.000021
S1263P1263PccAccT11AY.50.000021
S1263P1263delCCA---11AY.5.30.000337
S1263P1263LcCacTa11AY.5.30.000337
S1263P1263LcCacTa11AY.530.000288
S1263P1263LcCacTa11AY.590.00053
S1263P1263SCcaTca11AY.60.000041
S1263P1263SCcaTca11AY.600.000938
S1263P1263delCCA---11AY.600.000938
S1263P1263TCcaAca11AY.610.000105
S1263P1263LcCacTa11AY.680.000274
S1263P1263TCcaAca11AY.680.000274
S1263P1263LcCacTa11AY.690.000187
S1263P1263LcCacTa11AY.710.000475
S1263P1263RcCacGa11AY.720.001361
S1263P1263LcCacTa11AY.730.000665
S1263P1263SCcaTca11AY.740.000116
S1263P1263SCcaTca11AY.750.000056
S1263P1263QcCacAa11AY.75.10.00018
S1263P1263TCcaAca11AY.770.001127
S1263P1263LcCacTa11AY.800.001129
S1263P1263del2CCa--a11AY.810.001992
S1263P1263LcCacTa11AY.820.001357
S1263P1263LcCacTa11AY.830.001724
S1263P1263PccAccG11AY.840.000437
S1263P1263LcCacTa11AY.850.000427
S1263P1263LcCacTa11AY.870.000833
S1263P1263LcCacTa11AY.890.004902
S1263P1263QcCacAa11AY.9.10.000084
S1263P1263SCcaTca11AY.9.20.000037
S1263P1263LcCacTa11AY.900.000684
S1263P1263LcCacTa11AY.910.00073
S1263P1263SCcaTca11AY.910.00073
S1263P1263PccAccC11AY.920.000287
S1263P1263LcCacTa11AY.950.000761
S1263P1263LcCacTa11AY.99.10.001553
S1263P1263RcCacGa11AY.99.20.000092
S1263P1263PccAccT11AY.99.20.000092
S1263P1263LcCacTa11AZ.50.003509
S1263P1263NCCAAAC11B.10.000009
S1263P1263CCCATGC11B.10.000009
S1263P1263WCCATGG11B.10.000009
S1263P1263YCCATAC11B.10.000009
S1263P1263ICCaATa11B.1.10.000018
S1263P1263VCCaGTa11B.1.10.000018
S1263P1263XCCaTAa11B.1.10.000018
S1263P1263LcCacTa11B.1.1.1190.034483
S1263P1263LCCaTTa11B.1.1.1370.0125
S1263P1263QcCacAa11B.1.1.1700.001247
S1263P1263LcCacTa11B.1.1.1920.002309
S1263P1263ACcaGca11B.1.1.1930.111111
S1263P1263LcCacTa11B.1.1.2100.005714
S1263P1263PccAccC11B.1.1.2140.000055
S1263P1263LcCacTa11B.1.1.2160.00089
S1263P1263LcCacTa11B.1.1.2200.001859
S1263P1263LcCacTa11B.1.1.2320.001815
S1263P1263LcCacTa11B.1.1.2650.003155
S1263P1263PccAccG11B.1.1.280.000311
S1263P1263LcCacTa11B.1.1.280.000311
S1263P1263SCcaTca11B.1.1.30.008696
S1263P1263delCCA---11B.1.1.3010.001179
S1263P1263delCCA---11B.1.1.3120.001912
S1263P1263LcCacTa11B.1.1.3170.000412
S1263P1263LcCacTa11B.1.1.3360.016667
S1263P1263delCCA---11B.1.1.370.000193
S1263P1263ACcaGca11B.1.1.3720.000689
S1263P1263LcCacTa11B.1.1.3880.045455
S1263P1263LcCacTa11B.1.1.4060.006494
S1263P1263ICCaATa11B.1.1.4090.002833
S1263P1263SCcaTca11B.1.1.4090.002833
S1263P1263TCcaAca11B.1.1.4090.002833
S1263P1263QcCacAa11B.1.1.4330.001425
S1263P1263LcCacTa11B.1.1.480.002874
S1263P1263SCcaTca11B.1.1.4860.001577
S1263P1263LcCacTa11B.1.1.5180.006329
S1263P1263PccAccG11B.1.1.5190.00004
S1263P1263LcCacTa11B.1.1.5230.001563
S1263P1263QcCacAa11B.1.1.5260.003546
S1263P1263LcCacTa11B.1.1.5280.004808
S1263P1263NCCAAAT11B.1.1.70.000001
S1263P1263HcCAcAT11B.1.1.70.000001
S1263P1263del2CCa--a11B.1.1.70.000001
S1263P1263SCcaTca11B.1.1.700.000341
S1263P1263LcCacTa11B.1.110.30.000718
S1263P1263LcCacTa11B.1.1110.001175
S1263P1263PccAccT11B.1.1120.005181
S1263P1263LcCacTa11B.1.1280.000635
S1263P1263PccAccT11B.1.1460.004237
S1263P1263QcCacAa11B.1.1600.000031
S1263P1263delCCA---11B.1.1600.000031
S1263P1263QcCacAa11B.1.160.160.000929
S1263P1263delCCA---11B.1.160.230.004831
S1263P1263LcCacTa11B.1.160.320.004292
S1263P1263KCCaAAa11B.1.1770.000013
S1263P1263del2CCa--a11B.1.1770.000013
S1263P1263LcCacTa11B.1.177.160.000664
S1263P1263LcCacTa11B.1.177.170.000821
S1263P1263delCCA---11B.1.177.190.001431
S1263P1263LcCacTa11B.1.177.210.000076
S1263P1263LcCacTa11B.1.177.240.001295
S1263P1263LcCacTa11B.1.177.320.00135
S1263P1263LcCacTa11B.1.177.440.000519
S1263P1263LcCacTa11B.1.177.50.001242
S1263P1263delCCA---11B.1.177.690.001484
S1263P1263SCcaTca11B.1.177.730.000566
S1263P1263XCCaTGa11B.1.177.730.000566
S1263P1263TCcaAca11B.1.177.730.000566
S1263P1263LcCacTa11B.1.177.730.000566
S1263P1263delCCA---11B.1.177.760.002494
S1263P1263VCCaGTa11B.1.177.810.000189
S1263P1263ACcaGca11B.1.177.810.000189
S1263P1263LcCacTa11B.1.177.810.000189
S1263P1263del2CCA--G11B.1.177.830.001481
S1263P1263RcCacGa11B.1.20.000009
S1263P1263LcCacTa11B.1.2010.005682
S1263P1263LcCacTa11B.1.2060.000816
S1263P1263ICCaATa11B.1.2210.000071
S1263P1263VCCaGTa11B.1.2210.000071
S1263P1263GCCaGGa11B.1.2210.000071
S1263P1263delCCA---11B.1.221.10.002907
S1263P1263ECCaGAa11B.1.2220.001692
S1263P1263PccAccT11B.1.2220.001692
S1263P1263TCcaAca11B.1.2220.001692
S1263P1263XCCaTAa11B.1.2220.001692
S1263P1263DCCAGAT11B.1.2220.001692
S1263P1263YCCATAT11B.1.2220.001692
S1263P1263HcCAcAT11B.1.2220.001692
S1263P1263QcCacAa11B.1.2220.001692
S1263P1263LcCacTa11B.1.2290.009709
S1263P1263LcCacTa11B.1.2340.000132
S1263P1263KCCaAAa11B.1.2340.000132
S1263P1263PccAccT11B.1.2340.000132
S1263P1263LcCacTa11B.1.2360.002053
S1263P1263LcCacTa11B.1.2410.000812
S1263P1263SCcaTca11B.1.2580.000067
S1263P1263QcCacAa11B.1.2580.000067
S1263P1263PccAccG11B.1.2580.000067
S1263P1263delCCA---11B.1.2580.000067
S1263P1263LcCacTa11B.1.2600.003344
S1263P1263LcCacTa11B.1.3110.000275
S1263P1263QcCacAa11B.1.3110.000275
S1263P1263QcCacAa11B.1.3150.006061
S1263P1263LcCacTa11B.1.3190.003049
S1263P1263LcCacTa11B.1.3200.001245
S1263P1263LcCacTa11B.1.3360.002439
S1263P1263LcCacTa11B.1.3490.000715
S1263P1263TCcaAca11B.1.3510.00003
S1263P1263RcCacGa11B.1.3510.00003
S1263P1263QcCacAa11B.1.3510.00003
S1263P1263PccAccT11B.1.3510.00003
S1263P1263PccAccC11B.1.351.20.000303
S1263P1263delCCA---11B.1.360.000146
S1263P1263SCcaTca11B.1.360.000146
S1263P1263LcCacTa11B.1.36.100.004785
S1263P1263delCCA---11B.1.36.170.000494
S1263P1263LcCacTa11B.1.36.180.00042
S1263P1263delCCA---11B.1.36.180.00042
S1263P1263SCcaTca11B.1.36.20.010753
S1263P1263LcCacTa11B.1.36.270.000763
S1263P1263delCCA---11B.1.36.290.000517
S1263P1263QcCacAa11B.1.36.310.001751
S1263P1263SCcaTca11B.1.36.310.001751
S1263P1263LcCacTa11B.1.36.310.001751
S1263P1263LcCacTa11B.1.36.80.001
S1263P1263delCCA---11B.1.3890.001002
S1263P1263LcCacTa11B.1.4080.00369
S1263P1263delCCA---11B.1.4090.000781
S1263P1263LcCacTa11B.1.4110.003704
S1263P1263LcCacTa11B.1.4130.004255
S1263P1263LcCacTa11B.1.4220.000812
S1263P1263LcCacTa11B.1.4240.008065
S1263P1263LcCacTa11B.1.4280.00102
S1263P1263delCCA---11B.1.4290.000024
S1263P1263LcCacTa11B.1.4410.009615
S1263P1263LcCacTa11B.1.4420.035714
S1263P1263PccAccT11B.1.466.20.000391
S1263P1263TCcaAca11B.1.4680.005714
S1263P1263SCcaTca11B.1.4970.000315
S1263P1263LcCacTa11B.1.4970.000315
S1263P1263LcCacTa11B.1.5400.009709
S1263P1263LcCacTa11B.1.5640.000426
S1263P1263LcCacTa11B.1.5670.003333
S1263P1263LcCacTa11B.1.5760.000907
S1263P1263delCCA---11B.1.5770.000687
S1263P1263LcCacTa11B.1.5800.004065
S1263P1263QcCacAa11B.1.5800.004065
S1263P1263LcCacTa11B.1.6000.005848
S1263P1263LcCacTa11B.1.6090.000479
S1263P1263SCcaTca11B.1.6090.000479
S1263P1263del1Cca-ca11B.1.617.20.000004
S1263P1263LcCacTa11B.1.621.10.000506
S1263P1263SCcaTca11B.1.621.10.000506
S1263P1263LcCacTa11B.1.6260.005714
S1263P1263SCcaTca11B.1.6270.00202
S1263P1263LcCacTa11B.1.6280.000352
S1263P1263PccAccT11B.1.6300.005236
S1263P1263RcCacGa11B.1.9.50.005682
S1263P1263LcCacTa11B.4.70.010101
S1263P1263QcCAcAG11B.550.00295
S1263P1263TCcaAca11B.60.00091
S1263P1263LcCacTa11B.6.30.026316
S1263P1263LcCacTa11B.6.60.000889
S1263P1263LcCacTa11C.1.10.076923
S1263P1263LcCacTa11C.140.004329
S1263P1263LcCacTa11C.160.00106
S1263P1263LcCacTa11C.180.002591
S1263P1263ACcaGca11C.350.000774
S1263P1263LcCacTa11N.50.001767
S1263P1263QcCacAa11P.10.000016
S1263P1263delCCA---11P.10.000016
S1263P1263delCCA---11P.1.10.000318
S1263P1263RcCacGa11P.1.100.000269
S1263P1263PccAccG11P.1.120.000484
S1263P1263LcCacTa11P.1.130.000898
S1263P1263delCCA---11P.1.150.000232
S1263P1263QcCacAa11P.1.160.000374
S1263P1263LcCacTa11P.1.160.000374
S1263P1263delCCA---11P.20.000187
S1263P1263PccAccG11P.40.003802
S1263P1263delCCA---11Q.20.000613
S1263P1263LcCacTa11Q.30.000145
S1263P1263PccAccT11R.10.00009
S1263P1263LcCacTa11Y.10.012821