CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1162 & Codon = ccT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1162P1162PsynccAccT11451440.12576425046-25048

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1162P1162PccAccT1441145All0.000028
S1162P1162PccAccT4397AY.250.000024
S1162P1162PccAccT2192B.1.1.70.000019
S1162P1162PccAccT3939B.1.4130.165957
S1162P1162PccAccT732B.1.617.20.000026
S1162P1162PccAccT815B.10.000073
S1162P1162PccAccT112AY.440.000006
S1162P1162PccAccT69AY.200.000233
S1162P1162PccAccT69AY.40.000009
S1162P1162PccAccT99B.400.003279
S1162P1162PccAccT18AY.430.000004
S1162P1162PccAccT36AY.30.00003
S1162P1162PccAccT55AY.330.000334
S1162P1162PccAccT15B.1.10.000018
S1162P1162PccAccT24AY.1030.000012
S1162P1162PccAccT44AY.610.000419
S1162P1162PccAccT14P.10.000016
S1162P1162PccAccT13AY.1190.000035
S1162P1162PccAccT22A.290.010638
S1162P1162PccAccT12AY.290.000016
S1162P1162PccAccT22AY.60.000082
S1162P1162PccAccT22AY.90.000135
S1162P1162PccAccT22B.1.1.5280.009615
S1162P1162PccAccT22B.1.466.20.000782
S1162P1162PccAccT110.055556
S1162P1162PccAccT11A.10.000282
S1162P1162PccAccT11AY.1010.00049
S1162P1162PccAccT11AY.4.2.10.000149
S1162P1162PccAccT11AY.4.50.000107
S1162P1162PccAccT11AY.450.000122
S1162P1162PccAccT11AY.730.000665
S1162P1162PccAccT11AY.750.000056
S1162P1162PccAccT11AY.99.20.000092
S1162P1162PccAccT11B0.000128
S1162P1162PccAccT11B.1.3690.000285
S1162P1162PccAccT11B.1.4290.000024
S1162P1162PccAccT11B.1.5170.000427
S1162P1162PccAccT11C.30.007634