CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1140 & Codon = ccA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1140P1140PsynccTccA1665400.02402424980-24982

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1140P1140PccTccA401665All0.000008
S1140P1140PccTccA3215B.1.617.20.000011
S1140P1140PccTccA231AY.40.000003
S1140P1140PccTccA226B.1.1.70.000002
S1140P1140PccTccA719B.1.5260.000165
S1140P1140PccTccA1111AY.4.20.000239
S1140P1140PccTccA110AY.1030.000006
S1140P1140PccTccA36AY.1020.00008
S1140P1140PccTccA14AY.320.000532
S1140P1140PccTccA330.166667
S1140P1140PccTccA13AY.430.000004
S1140P1140PccTccA22AY.1180.000125
S1140P1140PccTccA22B.1.1.3060.000877
S1140P1140PccTccA11AY.230.00007
S1140P1140PccTccA11B.1.1600.000031