CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1140 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1140P1140SnonsynCctTct69630.91304324980-24982

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1140P1140SCctTct6369All0.000012
S1140P1140SCctTct77AY.40.000011
S1140P1140SCctTct66AY.440.000037
S1140P1140SCctTct66B.1.1.70.000005
S1140P1140SCctTct350.166667
S1140P1140SCctTct44AY.1030.000025
S1140P1140SCctTct33B.10.000027
S1140P1140SCctTct33B.1.10.000054
S1140P1140SCctTct33B.1.20.000026
S1140P1140SCctTct22AU.10.002532
S1140P1140SCctTct22AY.430.000009
S1140P1140SCctTct22AY.460.000208
S1140P1140SCctTct12B.1.2210.000071
S1140P1140SCctTct12B.1.5260.000024
S1140P1140SCctTct22B.1.617.20.000008
S1140P1140SCctTct11AY.1060.000335
S1140P1140SCctTct11AY.1180.000063
S1140P1140SCctTct11AY.210.001898
S1140P1140SCctTct11AY.250.000006
S1140P1140SCctTct11AY.390.000025
S1140P1140SCctTct11AY.4.20.000022
S1140P1140SCctTct11AY.610.000105
S1140P1140SCctTct11AY.7.10.000113
S1140P1140SCctTct11AY.840.000437
S1140P1140SCctTct11AY.9.20.000037
S1140P1140SCctTct11AY.98.10.000048
S1140P1140SCctTct11AY.990.001049
S1140P1140SCctTct11B.1.1770.000013
S1140P1140SCctTct11B.1.177.150.000631
S1140P1140SCctTct11B.1.2790.000514
S1140P1140SCctTct11B.1.3110.000275
S1140P1140SCctTct11B.1.4590.004082
S1140P1140SCctTct11B.550.00295