CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1139 & Codon = Cat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1139D1139HnonsynGatCat106810670.99906424977-24979

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1139D1139HGatCat10671068All0.000204
S1139D1139HGatCat190190AV.10.959596
S1139D1139HGatCat9898B.1.2340.01293
S1139D1139HGatCat6666AY.250.000397
S1139D1139HGatCat6666AY.430.000292
S1139D1139HGatCat5858B.1.1.70.000052
S1139D1139HGatCat5151AY.40.000079
S1139D1139HGatCat4242AY.290.000662
S1139D1139HGatCat3838AY.260.001076
S1139D1139HGatCat3232B.10.000293
S1139D1139HGatCat3131B.1.617.20.000117
S1139D1139HGatCat2222AY.1030.000137
S1139D1139HGatCat2222AY.440.000134
S1139D1139HGatCat1818B.1.20.000158
S1139D1139HGatCat1717AY.740.001966
S1139D1139HGatCat1717B.1.10.000308
S1139D1139HGatCat1414P.10.000221
S1139D1139HGatCat1313B.1.1.2840.001396
S1139D1139HGatCat1212AY.1020.000318
S1139D1139HGatCat1111B.1.1770.000145
S1139D1139HGatCat1010AY.270.000647
S1139D1139HGatCat1010AY.50.000206
S1139D1139HGatCat1010AY.690.001867
S1139D1139HGatCat99AY.60.00037
S1139D1139HGatCat88AY.420.000322
S1139D1139HGatCat88AY.46.50.001587
S1139D1139HGatCat88B.1.5510.010323
S1139D1139HGatCat77AY.1190.000247
S1139D1139HGatCat77AY.330.000467
S1139D1139HGatCat77AY.390.000173
S1139D1139HGatCat77AY.4.20.000152
S1139D1139HGatCat66AY.450.00073
S1139D1139HGatCat66B.1.3510.000178
S1139D1139HGatCat55AY.1000.00023
S1139D1139HGatCat55AY.200.000194
S1139D1139HGatCat55AY.46.60.000361
S1139D1139HGatCat55AY.470.000156
S1139D1139HGatCat44AY.340.000388
S1139D1139HGatCat44AY.980.000316
S1139D1139HGatCat44B.1.621.10.002023
S1139D1139HGatCat33AY.1010.001471
S1139D1139HGatCat33AY.540.000286
S1139D1139HGatCat33AY.7.10.000338
S1139D1139HGatCat33AY.9.10.000251
S1139D1139HGatCat33B.1.1.370.000579
S1139D1139HGatCat33B.1.2400.000647
S1139D1139HGatCat33B.1.2430.000209
S1139D1139HGatCat33B.1.4290.000071
S1139D1139HGatCat33B.1.5260.000071
S1139D1139HGatCat33B.1.5960.000261
S1139D1139HGatCat120.055556
S1139D1139HGatCat22A.23.10.001408
S1139D1139HGatCat22AY.1160.000574
S1139D1139HGatCat22AY.140.000176
S1139D1139HGatCat22AY.230.000139
S1139D1139HGatCat22AY.30.00002
S1139D1139HGatCat22AY.400.001929
S1139D1139HGatCat22AY.46.40.000329
S1139D1139HGatCat22AY.590.001059
S1139D1139HGatCat22AY.670.000929
S1139D1139HGatCat22B.1.1.5190.000079
S1139D1139HGatCat22B.1.4270.000101
S1139D1139HGatCat22B.1.5550.044444
S1139D1139HGatCat22B.1.5760.001813
S1139D1139HGatCat22P.1.20.002312
S1139D1139HGatCat22P.20.000373
S1139D1139HGatCat11AY.1090.00074
S1139D1139HGatCat11AY.1130.000142
S1139D1139HGatCat11AY.1170.000085
S1139D1139HGatCat11AY.1200.000037
S1139D1139HGatCat11AY.120.2.10.000498
S1139D1139HGatCat11AY.1210.000135
S1139D1139HGatCat11AY.130.000161
S1139D1139HGatCat11AY.210.001898
S1139D1139HGatCat11AY.3.10.000085
S1139D1139HGatCat11AY.34.10.00051
S1139D1139HGatCat11AY.460.000104
S1139D1139HGatCat11AY.5.40.000277
S1139D1139HGatCat11AY.560.001605
S1139D1139HGatCat11AY.610.000105
S1139D1139HGatCat11AY.620.000436
S1139D1139HGatCat11AY.880.000884
S1139D1139HGatCat11AY.920.000287
S1139D1139HGatCat11AY.98.10.000048
S1139D1139HGatCat11B.1.1.2140.000055
S1139D1139HGatCat11B.1.1.250.000569
S1139D1139HGatCat11B.1.1.3460.029412
S1139D1139HGatCat11B.1.1.4640.001473
S1139D1139HGatCat11B.1.1.700.000341
S1139D1139HGatCat11B.1.1600.000031
S1139D1139HGatCat11B.1.177.170.000821
S1139D1139HGatCat11B.1.177.180.00116
S1139D1139HGatCat11B.1.177.520.001757
S1139D1139HGatCat11B.1.177.770.000726
S1139D1139HGatCat11B.1.177.810.000189
S1139D1139HGatCat11B.1.2210.000071
S1139D1139HGatCat11B.1.258.110.000396
S1139D1139HGatCat11B.1.258.170.000104
S1139D1139HGatCat11B.1.3060.005714
S1139D1139HGatCat11B.1.351.20.000303
S1139D1139HGatCat11B.1.360.000146
S1139D1139HGatCat11B.1.36.170.000494
S1139D1139HGatCat11B.1.36.290.000517
S1139D1139HGatCat11B.1.3670.000792
S1139D1139HGatCat11B.1.3960.000706
S1139D1139HGatCat11B.1.4680.005714
S1139D1139HGatCat11B.1.6210.000089
S1139D1139HGatCat11B.1.6230.000536
S1139D1139HGatCat11B.1.6370.000073
S1139D1139HGatCat11B.1.910.002075
S1139D1139HGatCat11C.110.010638
S1139D1139HGatCat11C.330.058824
S1139D1139HGatCat11C.360.000911
S1139D1139HGatCat11D.20.000075
S1139D1139HGatCat11P.1.10.000318
S1139D1139HGatCat11P.1.120.000484
S1139D1139HGatCat11P.1.170.000162
S1139D1139HGatCat11Q.10.000126
S1139D1139HGatCat11R.10.00009