CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 1104 & Codon = Cta

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1104V1104LnonsynGtaCta402684930.01224324872-24874

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1104V1104LGtaCta49340268All0.000094
S1104V1104LGtaCta191411B.1.617.20.000072
S1104V1104LGtaCta133967B.1.1.70.000119
S1104V1104LGtaCta98818AY.40.000153
S1104V1104LGtaCta5596AY.430.000022
S1104V1104LGtaCta4274B.1.10.000073
S1104V1104LGtaCta37236AY.260.001047
S1104V1104LGtaCta39196AY.440.000237
S1104V1104LGtaCta12146AY.250.000072
S1104V1104LGtaCta5142B.1.1770.000066
S1104V1104LGtaCta997AY.1030.000056
S1104V1104LGtaCta2495B.1.4290.000565
S1104V1104LGtaCta1082AY.50.000206
S1104V1104LGtaCta178AY.1170.000085
S1104V1104LGtaCta577AY.30.00005
S1104V1104LGtaCta177B.10.000009
S1104V1104LGtaCta175AY.420.00004
S1104V1104LGtaCta160AY.1210.000135
S1104V1104LGtaCta351B.1.20.000026
S1104V1104LGtaCta547AY.390.000124
S1104V1104LGtaCta245AY.1200.000074
S1104V1104LGtaCta345P.10.000047
S1104V1104LGtaCta130AY.230.00007
S1104V1104LGtaCta125B.1.1.330.000421
S1104V1104LGtaCta122AY.4.20.000022
S1104V1104LGtaCta120AY.540.000095
S1104V1104LGtaCta2020L.41
S1104V1104LGtaCta119AY.98.10.000048
S1104V1104LGtaCta218AY.1020.000053
S1104V1104LGtaCta116AY.5.30.000337
S1104V1104LGtaCta215AY.1000.000092
S1104V1104LGtaCta515B.1.5260.000118
S1104V1104LGtaCta213B.1.1600.000062
S1104V1104LGtaCta78B.1.1.3160.006475
S1104V1104LGtaCta37AY.1160.00086
S1104V1104LGtaCta26AY.580.001815
S1104V1104LGtaCta26B.1.1.370.000386
S1104V1104LGtaCta15AY.46.30.000934
S1104V1104LGtaCta35B.1.6210.000266
S1104V1104LGtaCta44B.1.1.1380.024242
S1104V1104LGtaCta24B.1.3690.00057
S1104V1104LGtaCta24B.1.5960.000174
S1104V1104LGtaCta34C.360.002732
S1104V1104LGtaCta14P.20.000187
S1104V1104LGtaCta12AY.630.000387
S1104V1104LGtaCta22B.1.1280.001271
S1104V1104LGtaCta12B.1.5610.000397
S1104V1104LGtaCta11A.10.000282
S1104V1104LGtaCta11AY.150.002222
S1104V1104LGtaCta11B.1.1.3630.005988
S1104V1104LGtaCta11B.1.160.140.002119
S1104V1104LGtaCta11B.1.177.350.000691