CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = V32A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF832V32AnonsyngTagCa5885860.99659927987-27989
ORF832V32AnonsyngTAgCT58820.0034013627987-27989

Details of the mutation V32A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF832V32AgTagCa586588All0.000112
ORF832V32AgTAgCT2588All0
ORF832V32AgTagCa328328B.1.1.70.000294
ORF832V32AgTagCa6262AY.430.000275
ORF832V32AgTagCa4343B.1.20.000379
ORF832V32AgTagCa1618AY.40.000025
ORF832V32AgTAgCT218AY.40.000003
ORF832V32AgTagCa1616AY.440.000097
ORF832V32AgTagCa1616B.1.5770.010997
ORF832V32AgTagCa99AY.650.004797
ORF832V32AgTagCa88B.1.10.000145
ORF832V32AgTagCa66AY.290.000095
ORF832V32AgTagCa66AY.30.00006
ORF832V32AgTagCa66B.1.617.20.000023
ORF832V32AgTagCa66P.10.000095
ORF832V32AgTagCa55AY.250.00003
ORF832V32AgTagCa44B.10.000037
ORF832V32AgTagCa33AY.200.000117
ORF832V32AgTagCa33AY.50.000062
ORF832V32AgTagCa33AY.940.001328
ORF832V32AgTagCa33AY.98.10.000145
ORF832V32AgTagCa33B.1.1.330.001263
ORF832V32AgTagCa33B.1.1310.026316
ORF832V32AgTagCa33B.1.1770.00004
ORF832V32AgTagCa22AY.1030.000012
ORF832V32AgTagCa22AY.330.000134
ORF832V32AgTagCa22AY.420.00008
ORF832V32AgTagCa22B.1.360.000292
ORF832V32AgTagCa22B.1.5260.000047
ORF832V32AgTagCa11AY.120.10.000321
ORF832V32AgTagCa11AY.1210.000135
ORF832V32AgTagCa11AY.260.000028
ORF832V32AgTagCa11AY.4.20.000022
ORF832V32AgTagCa11AY.46.20.000635
ORF832V32AgTagCa11AY.770.001127
ORF832V32AgTagCa11AY.9.10.000084
ORF832V32AgTagCa11AY.910.00073
ORF832V32AgTagCa11AY.980.000079
ORF832V32AgTagCa11B.1.1.5190.00004
ORF832V32AgTagCa11B.1.1470.000756
ORF832V32AgTagCa11B.1.177.810.000189
ORF832V32AgTagCa11B.1.2060.000816
ORF832V32AgTagCa11B.1.2210.000071
ORF832V32AgTagCa11B.1.258.170.000104
ORF832V32AgTagCa11B.1.3510.00003
ORF832V32AgTagCa11B.1.36.100.004785
ORF832V32AgTagCa11B.1.438.10.000107
ORF832V32AgTagCa11B.1.5170.000427
ORF832V32AgTagCa11B.1.617.30.002985
ORF832V32AgTagCa11B.1.88.10.004808
ORF832V32AgTagCa11C.370.000116
ORF832V32AgTagCa11D.20.000075
ORF832V32AgTagCa11P.1.170.000162

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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