CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = R52del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF852R52del2delAGa--a26240.92307728047-28049
ORF852R52del2delaGAa--2610.038461528047-28049
ORF852R52del2delAGA--T2610.038461528047-28049

Details of the mutation R52del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF852R52del2AGa--a2426All0.000005
ORF852R52del2AGA--T126All0
ORF852R52del2aGAa--126All0
ORF852R52del2AGa--a1717B.1.1.70.000015
ORF852R52del2AGa--a220.111111
ORF852R52del2AGa--a11AY.1030.000006
ORF852R52del2AGA--T11AY.430.000004
ORF852R52del2AGa--a11AY.460.000104
ORF852R52del2AGa--a11B.10.000009
ORF852R52del2AGa--a11B.1.1.700.000341
ORF852R52del2aGAa--11B.1.177.630.002703
ORF852R52del2AGa--a11D.20.000075