CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = R52R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF852R52RsynagAagG76510.67105328047-28049
ORF852R52RsynAgaCga76250.32894728047-28049

Details of the mutation R52R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF852R52RagAagG5176All0.00001
ORF852R52RAgaCga2576All0.000005
ORF852R52RAgaCga1111A.2.5.30.113402
ORF852R52RAgaCga57AY.30.00005
ORF852R52RagAagG27AY.30.00002
ORF852R52RagAagG55B.10.000046
ORF852R52RagAagG34AY.40.000005
ORF852R52RAgaCga14AY.40.000002
ORF852R52RagAagG34B.1.617.20.000011
ORF852R52RAgaCga14B.1.617.20.000004
ORF852R52RagAagG33AY.4.20.000065
ORF852R52RagAagG33AY.440.000018
ORF852R52RagAagG33B.1.20.000026
ORF852R52RagAagG33B.1.36.290.001552
ORF852R52RAgaCga22A.2.50.000998
ORF852R52RAgaCga12AY.430.000004
ORF852R52RagAagG12AY.430.000004
ORF852R52RagAagG22AY.470.000062
ORF852R52RagAagG22AY.50.000041
ORF852R52RagAagG22B.1.1770.000026
ORF852R52RagAagG22B.1.4000.000858
ORF852R52RagAagG22P.10.000032
ORF852R52RagAagG11AY.1020.000027
ORF852R52RAgaCga11AY.1030.000006
ORF852R52RAgaCga11AY.1130.000142
ORF852R52RagAagG11AY.190.00114
ORF852R52RAgaCga11AY.240.000431
ORF852R52RagAagG11AY.250.000006
ORF852R52RagAagG11AY.260.000028
ORF852R52RagAagG11AY.290.000016
ORF852R52RagAagG11AY.390.000025
ORF852R52RAgaCga11AY.460.000104
ORF852R52RagAagG11AY.9.20.000037
ORF852R52RagAagG11B0.000128
ORF852R52RagAagG11B.1.10.000018
ORF852R52RagAagG11B.1.1.2940.001266
ORF852R52RagAagG11B.1.1.3690.000446
ORF852R52RagAagG11B.1.2430.00007
ORF852R52RagAagG11B.1.2580.000067
ORF852R52RagAagG11B.1.438.10.000107
ORF852R52RagAagG11B.1.5950.000261