CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = R52I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF852R52InonsynaGaaTa113970511397020.99999728047-28049
ORF852R52InonsynaGAaTT113970520.0000017548428047-28049
ORF852R52InonsynaGAaTC113970510.0000008774228047-28049

Details of the mutation R52I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF852R52IaGaaTa11397021139705All0.217981
ORF852R52IaGAaTT21139705All0
ORF852R52IaGAaTC11139705All0
ORF852R52IaGaaTa11038421103843B.1.1.70.988185
ORF852R52IaGAaTT11103843B.1.1.70.000001
ORF852R52IaGaaTa78337833Q.10.989515
ORF852R52IaGaaTa68586858Q.30.994634
ORF852R52IaGaaTa60566056Q.80.998681
ORF852R52IaGaaTa21932193Q.40.997271
ORF852R52IaGaaTa15241524B.1.10.027647
ORF852R52IaGaaTa13821382Q.20.847853
ORF852R52IaGaaTa12801280B.10.011724
ORF852R52IaGaaTa12561256AY.40.001955
ORF852R52IaGaaTa896896Q.70.995556
ORF852R52IaGaaTa594596AY.430.002632
ORF852R52IaGAaTC1596AY.430.000004
ORF852R52IaGAaTT1596AY.430.000004
ORF852R52IaGaaTa585585B.1.617.20.002203
ORF852R52IaGaaTa255255B.1.2580.016969
ORF852R52IaGaaTa255255B.1.6370.018634
ORF852R52IaGaaTa249249AY.1030.001546
ORF852R52IaGaaTa231231AY.440.001406
ORF852R52IaGaaTa183183AY.16.10.085996
ORF852R52IaGaaTa183183B.1.6210.016199
ORF852R52IaGaaTa181181B.1.258.170.018819
ORF852R52IaGaaTa161161P.10.002536
ORF852R52IaGaaTa155155B.1.177.730.087769
ORF852R52IaGaaTa151151Q.61
ORF852R52IaGaaTa142142B.1.5760.12874
ORF852R52IaGaaTa125125B.1.4290.002941
ORF852R52IaGaaTa114114B.1.20.001004
ORF852R52IaGaaTa109109B.1.1770.001435
ORF852R52IaGaaTa107107AY.1020.002837
ORF852R52IaGaaTa8080B.1.5960.006971
ORF852R52IaGaaTa7979AY.200.00307
ORF852R52IaGaaTa7878AY.120.024652
ORF852R52IaGaaTa7575AY.60.003085
ORF852R52IaGaaTa7171P.1.10.022554
ORF852R52IaGaaTa6464B.1.3750.052459
ORF852R52IaGaaTa6161AY.250.000367
ORF852R52IaGaaTa5959AY.30.000587
ORF852R52IaGaaTa5858Q.50.983051
ORF852R52IaGaaTa5353AY.3.10.004519
ORF852R52IaGaaTa5252AY.420.002092
ORF852R52IaGaaTa5151B.1.5260.001199
ORF852R52IaGaaTa5050AY.1000.0023
ORF852R52IaGaaTa4646B.1.36.310.08056
ORF852R52IaGaaTa4545AY.1190.001589
ORF852R52IaGaaTa4545XA1
ORF852R52IaGaaTa4444B.1.3510.001308
ORF852R52IaGaaTa4141P.1.170.006632
ORF852R52IaGaaTa4040B0.005112
ORF852R52IaGaaTa3737B.1.621.10.018715
ORF852R52IaGaaTa3636B.1.1600.001123
ORF852R52IaGaaTa3535B.1.6200.033113
ORF852R52IaGaaTa3333B.1.6090.01582
ORF852R52IaGaaTa3232AY.390.000791
ORF852R52IaGaaTa3232AY.4.20.000694
ORF852R52IaGaaTa3232AY.98.10.00155
ORF852R52IaGaaTa3232B.1.177.70.005275
ORF852R52IaGaaTa3131AY.780.047766
ORF852R52IaGaaTa3131B.1.2210.002202
ORF852R52IaGaaTa2929P.1.140.001386
ORF852R52IaGaaTa2828A.2.50.013972
ORF852R52IaGaaTa2727B.1.160.190.964286
ORF852R52IaGaaTa2626P.1.100.007006
ORF852R52IaGaaTa2525AY.900.017112
ORF852R52IaGaaTa2424P.1.120.011617
ORF852R52IaGaaTa2323B.1.1.5190.000913
ORF852R52IaGaaTa2222AY.1170.001859
ORF852R52IaGaaTa2020B.1.2430.001392
ORF852R52IaGaaTa2020B.1.360.002918
ORF852R52IaGaaTa1818AY.230.001255
ORF852R52IaGaaTa1818AY.330.001202
ORF852R52IaGaaTa1818B.1.1.2160.016028
ORF852R52IaGaaTa1818P.1.150.004182
ORF852R52IaGaaTa1717AY.4.50.001827
ORF852R52IaGaaTa1616AY.39.10.000634
ORF852R52IaGaaTa1616P.1.160.005986
ORF852R52IaGaaTa1515AY.140.00132
ORF852R52IaGaaTa1515AY.260.000425
ORF852R52IaGaaTa1515AY.460.001561
ORF852R52IaGaaTa1515B.1.1.390.007645
ORF852R52IaGaaTa1414AY.290.000221
ORF852R52IaGaaTa1313AY.50.000268
ORF852R52IaGaaTa1313B.1.1.700.004434
ORF852R52IaGaaTa1313B.1.3690.003708
ORF852R52IaGaaTa1313B.1.4270.000656
ORF852R52IaGaaTa1313C.370.001509
ORF852R52IaGaaTa1212AY.99.20.001106
ORF852R52IaGaaTa1212B.1.1.3180.003621
ORF852R52IaGaaTa1212B.1.1.3260.021127
ORF852R52IaGaaTa1111B.1.1.2200.020446
ORF852R52IaGaaTa1111B.1.1.2910.008166
ORF852R52IaGaaTa1111B.1.1.3120.021033
ORF852R52IaGaaTa1111B.1.1.5280.052885
ORF852R52IaGaaTa1111B.1.2400.002371
ORF852R52IaGaaTa1111B.1.6230.005901
ORF852R52IaGaaTa1010AY.680.002737
ORF852R52IaGaaTa1010AY.750.00056
ORF852R52IaGaaTa1010B.1.4110.037037
ORF852R52IaGaaTa1010B.1.6280.003524
ORF852R52IaGaaTa1010C.36.30.005672
ORF852R52IaGaaTa99AY.1130.001282
ORF852R52IaGaaTa99AY.1200.000335
ORF852R52IaGaaTa99AY.46.60.00065
ORF852R52IaGaaTa99AY.9.20.000331
ORF852R52IaGaaTa99B.1.1.1610.031802
ORF852R52IaGaaTa99B.1.1.3740.021378
ORF852R52IaGaaTa88B.1.1.2220.001632
ORF852R52IaGaaTa88B.1.1.3690.00357
ORF852R52IaGaaTa88B.1.1.5070.069565
ORF852R52IaGaaTa88B.1.5250.000905
ORF852R52IaGaaTa77AY.360.001037
ORF852R52IaGaaTa77AY.450.000852
ORF852R52IaGaaTa77AY.730.004657
ORF852R52IaGaaTa77B.1.1.10.002287
ORF852R52IaGaaTa77B.1.1.3060.003069
ORF852R52IaGaaTa77B.1.1260.008929
ORF852R52IaGaaTa77B.1.3670.005547
ORF852R52IaGaaTa77B.1.438.10.000751
ORF852R52IaGaaTa77B.1.5330.067308
ORF852R52IaGaaTa77B.1.6190.006098
ORF852R52IaGaaTa77P.1.10.10.056911
ORF852R52IaGaaTa66A.2.5.10.028846
ORF852R52IaGaaTa66AY.1060.002009
ORF852R52IaGaaTa66AY.1210.000812
ORF852R52IaGaaTa66AY.350.001398
ORF852R52IaGaaTa66AY.480.002791
ORF852R52IaGaaTa66AY.530.001725
ORF852R52IaGaaTa66AY.9.10.000502
ORF852R52IaGaaTa66AY.920.001724
ORF852R52IaGaaTa66AY.980.000474
ORF852R52IaGaaTa66B.1.1.2790.006726
ORF852R52IaGaaTa66B.1.1.500.004073
ORF852R52IaGaaTa66B.1.3110.001647
ORF852R52IaGaaTa66B.1.5400.058252
ORF852R52IaGaaTa550.277778
ORF852R52IaGaaTa55A.23.10.003521
ORF852R52IaGaaTa55AY.470.000156
ORF852R52IaGaaTa55AY.5.40.001384
ORF852R52IaGaaTa55AY.610.000524
ORF852R52IaGaaTa55AY.670.002321
ORF852R52IaGaaTa55AY.950.003805
ORF852R52IaGaaTa55B.1.1.2940.006329
ORF852R52IaGaaTa55B.1.1.4090.014164
ORF852R52IaGaaTa55B.1.1390.003666
ORF852R52IaGaaTa55B.1.2370.024876
ORF852R52IaGaaTa55B.1.5800.020325
ORF852R52IaGaaTa55B.1.617.10.000645
ORF852R52IaGaaTa55B.1.619.10.003207
ORF852R52IaGaaTa55B.1.6250.011765
ORF852R52IaGaaTa55P.1.130.004492
ORF852R52IaGaaTa44AY.1090.002959
ORF852R52IaGaaTa44AY.240.001724
ORF852R52IaGaaTa44AY.4.2.10.000596
ORF852R52IaGaaTa44AY.75.10.000721
ORF852R52IaGaaTa44AZ.20.003284
ORF852R52IaGaaTa44B.1.1.280.001245
ORF852R52IaGaaTa44B.1.1.3550.061538
ORF852R52IaGaaTa44B.1.177.170.003284
ORF852R52IaGaaTa44B.1.2140.014652
ORF852R52IaGaaTa44B.1.214.20.002398
ORF852R52IaGaaTa44B.1.36.190.037037
ORF852R52IaGaaTa44B.1.36.80.004
ORF852R52IaGaaTa44B.1.5750.001214
ORF852R52IaGaaTa44B.1.5990.014599
ORF852R52IaGaaTa44B.1.6320.026846
ORF852R52IaGaaTa44N.50.007067
ORF852R52IaGaaTa44P.1.20.004624
ORF852R52IaGaaTa44P.20.000747
ORF852R52IaGaaTa44R.10.00036
ORF852R52IaGaaTa33A0.001161
ORF852R52IaGaaTa33AY.1160.00086
ORF852R52IaGaaTa33AY.1180.000188
ORF852R52IaGaaTa33AY.130.000483
ORF852R52IaGaaTa33AY.29.10.000662
ORF852R52IaGaaTa33AY.370.000948
ORF852R52IaGaaTa33AY.410.000882
ORF852R52IaGaaTa33AY.520.002443
ORF852R52IaGaaTa33AY.540.000286
ORF852R52IaGaaTa33AY.70.000588
ORF852R52IaGaaTa33AY.930.000819
ORF852R52IaGaaTa33B.1.1.2190.015
ORF852R52IaGaaTa33B.1.1.3170.001235
ORF852R52IaGaaTa33B.1.1.330.001263
ORF852R52IaGaaTa33B.1.1.4340.001046
ORF852R52IaGaaTa33B.1.1110.003525
ORF852R52IaGaaTa33B.1.177.40.000633
ORF852R52IaGaaTa33B.1.2340.000396
ORF852R52IaGaaTa33B.1.2360.00616
ORF852R52IaGaaTa33B.1.36.170.001482
ORF852R52IaGaaTa33B.1.36.380.004926
ORF852R52IaGaaTa33B.1.466.20.001174
ORF852R52IaGaaTa33B.1.4970.000944
ORF852R52IaGaaTa33B.1.5170.001281
ORF852R52IaGaaTa33B.1.5540.013216
ORF852R52IaGaaTa33B.1.930.002801
ORF852R52IaGaaTa33B.60.00273
ORF852R52IaGaaTa33P.1.60.005837
ORF852R52IaGaaTa22A.2.5.20.003145
ORF852R52IaGaaTa22A.250.036364
ORF852R52IaGaaTa22AE.80.000978
ORF852R52IaGaaTa22AY.10.000791
ORF852R52IaGaaTa22AY.1050.001286
ORF852R52IaGaaTa22AY.1080.002205
ORF852R52IaGaaTa22AY.1100.000225
ORF852R52IaGaaTa22AY.1110.000366
ORF852R52IaGaaTa22AY.300.000791
ORF852R52IaGaaTa22AY.340.000194
ORF852R52IaGaaTa22AY.580.001815
ORF852R52IaGaaTa22AY.620.000871
ORF852R52IaGaaTa22AY.640.00119
ORF852R52IaGaaTa22AY.650.001066
ORF852R52IaGaaTa22AY.7.10.000225
ORF852R52IaGaaTa22AY.840.000875
ORF852R52IaGaaTa22AY.90.000135
ORF852R52IaGaaTa22AY.910.001461
ORF852R52IaGaaTa22AY.91.10.00813
ORF852R52IaGaaTa22B.1.1.1410.004024
ORF852R52IaGaaTa22B.1.1.2100.011429
ORF852R52IaGaaTa22B.1.1.2140.000111
ORF852R52IaGaaTa22B.1.1.250.001137
ORF852R52IaGaaTa22B.1.1.2650.006309
ORF852R52IaGaaTa22B.1.1.2990.02439
ORF852R52IaGaaTa22B.1.1.3010.002358
ORF852R52IaGaaTa22B.1.1.3220.017544
ORF852R52IaGaaTa22B.1.1.5230.003125
ORF852R52IaGaaTa22B.1.1.5240.041667
ORF852R52IaGaaTa22B.1.1.5250.010929
ORF852R52IaGaaTa22B.1.1.5260.007092
ORF852R52IaGaaTa22B.1.1.630.000772
ORF852R52IaGaaTa22B.1.1190.021053
ORF852R52IaGaaTa22B.1.1570.00597
ORF852R52IaGaaTa22B.1.160.280.005848
ORF852R52IaGaaTa22B.1.177.310.022989
ORF852R52IaGaaTa22B.1.177.420.001789
ORF852R52IaGaaTa22B.1.177.580.002663
ORF852R52IaGaaTa22B.1.177.820.000955
ORF852R52IaGaaTa22B.1.177.830.002963
ORF852R52IaGaaTa22B.1.2600.006689
ORF852R52IaGaaTa22B.1.2700.011236
ORF852R52IaGaaTa22B.1.30.005236
ORF852R52IaGaaTa22B.1.3300.057143
ORF852R52IaGaaTa22B.1.351.30.001753
ORF852R52IaGaaTa22B.1.36.290.001035
ORF852R52IaGaaTa22B.1.3800.013245
ORF852R52IaGaaTa22B.1.4040.002604
ORF852R52IaGaaTa22B.1.415.10.015152
ORF852R52IaGaaTa22B.1.4330.00639
ORF852R52IaGaaTa22B.1.4620.014493
ORF852R52IaGaaTa22B.1.5970.009259
ORF852R52IaGaaTa22B.1.6330.083333
ORF852R52IaGaaTa22B.1.6360.013423
ORF852R52IaGaaTa22B.1.780.017094
ORF852R52IaGaaTa22B.1.940.054054
ORF852R52IaGaaTa22C.160.002121
ORF852R52IaGaaTa22C.360.001821
ORF852R52IaGaaTa22C.380.016129
ORF852R52IaGaaTa22P.1.70.000639
ORF852R52IaGaaTa11A.2.20.001689
ORF852R52IaGaaTa11A.210.00277
ORF852R52IaGaaTa11A.70.055556
ORF852R52IaGaaTa11AB.10.008197
ORF852R52IaGaaTa11AD.20.000219
ORF852R52IaGaaTa11AE.10.011364
ORF852R52IaGaaTa11AT.10.005128
ORF852R52IaGaaTa11AU.20.002421
ORF852R52IaGaaTa11AY.100.00053
ORF852R52IaGaaTa11AY.1010.00049
ORF852R52IaGaaTa11AY.1140.000231
ORF852R52IaGaaTa11AY.120.10.000321
ORF852R52IaGaaTa11AY.170.008197
ORF852R52IaGaaTa11AY.190.00114
ORF852R52IaGaaTa11AY.270.000065
ORF852R52IaGaaTa11AY.280.00189
ORF852R52IaGaaTa11AY.34.10.00051
ORF852R52IaGaaTa11AY.380.000499
ORF852R52IaGaaTa11AY.4.30.000842
ORF852R52IaGaaTa11AY.46.20.000635
ORF852R52IaGaaTa11AY.46.40.000165
ORF852R52IaGaaTa11AY.5.30.000337
ORF852R52IaGaaTa11AY.550.000917
ORF852R52IaGaaTa11AY.630.000387
ORF852R52IaGaaTa11AY.690.000187
ORF852R52IaGaaTa11AY.770.001127
ORF852R52IaGaaTa11AY.790.001211
ORF852R52IaGaaTa11AY.80.000606
ORF852R52IaGaaTa11AY.860.00083
ORF852R52IaGaaTa11AY.880.000884
ORF852R52IaGaaTa11AY.890.004902
ORF852R52IaGaaTa11AY.990.001049
ORF852R52IaGaaTa11AZ.2.10.00813
ORF852R52IaGaaTa11B.1.1.1010.01
ORF852R52IaGaaTa11B.1.1.1350.004695
ORF852R52IaGaaTa11B.1.1.1450.037037
ORF852R52IaGaaTa11B.1.1.1870.00885
ORF852R52IaGaaTa11B.1.1.1980.001468
ORF852R52IaGaaTa11B.1.1.2210.010101
ORF852R52IaGaaTa11B.1.1.2360.006897
ORF852R52IaGaaTa11B.1.1.2370.005405
ORF852R52IaGaaTa11B.1.1.2540.011236
ORF852R52IaGaaTa11B.1.1.260.005236
ORF852R52IaGaaTa11B.1.1.2690.001353
ORF852R52IaGaaTa11B.1.1.2770.000759
ORF852R52IaGaaTa11B.1.1.3110.000358
ORF852R52IaGaaTa11B.1.1.3400.045455
ORF852R52IaGaaTa11B.1.1.3430.020833
ORF852R52IaGaaTa11B.1.1.3650.005587
ORF852R52IaGaaTa11B.1.1.370.000193
ORF852R52IaGaaTa11B.1.1.3700.012658
ORF852R52IaGaaTa11B.1.1.3720.000689
ORF852R52IaGaaTa11B.1.1.3890.006061
ORF852R52IaGaaTa11B.1.1.4170.002703
ORF852R52IaGaaTa11B.1.1.440.00241
ORF852R52IaGaaTa11B.1.1.4400.011765
ORF852R52IaGaaTa11B.1.1.4480.002033
ORF852R52IaGaaTa11B.1.1.460.004367
ORF852R52IaGaaTa11B.1.1.550.012987
ORF852R52IaGaaTa11B.1.1.560.017857
ORF852R52IaGaaTa11B.1.1.830.00271
ORF852R52IaGaaTa11B.1.1.890.006061
ORF852R52IaGaaTa11B.1.1510.011111
ORF852R52IaGaaTa11B.1.160.140.002119
ORF852R52IaGaaTa11B.1.160.80.001289
ORF852R52IaGaaTa11B.1.177.110.001698
ORF852R52IaGaaTa11B.1.177.120.000152
ORF852R52IaGaaTa11B.1.177.150.000631
ORF852R52IaGaaTa11B.1.177.210.000076
ORF852R52IaGaaTa11B.1.177.330.001645
ORF852R52IaGaaTa11B.1.177.410.0025
ORF852R52IaGaaTa11B.1.177.460.000918
ORF852R52IaGaaTa11B.1.177.510.004566
ORF852R52IaGaaTa11B.1.177.520.001757
ORF852R52IaGaaTa11B.1.177.540.000606
ORF852R52IaGaaTa11B.1.177.600.000218
ORF852R52IaGaaTa11B.1.177.650.000665
ORF852R52IaGaaTa11B.1.177.670.007634
ORF852R52IaGaaTa11B.1.177.770.000726
ORF852R52IaGaaTa11B.1.2390.001221
ORF852R52IaGaaTa11B.1.2410.000812
ORF852R52IaGaaTa11B.1.258.110.000396
ORF852R52IaGaaTa11B.1.258.140.00098
ORF852R52IaGaaTa11B.1.258.150.018868
ORF852R52IaGaaTa11B.1.258.210.007752
ORF852R52IaGaaTa11B.1.258.70.001912
ORF852R52IaGaaTa11B.1.3060.005714
ORF852R52IaGaaTa11B.1.3320.003497
ORF852R52IaGaaTa11B.1.351.50.0006
ORF852R52IaGaaTa11B.1.36.10.00114
ORF852R52IaGaaTa11B.1.36.100.004785
ORF852R52IaGaaTa11B.1.36.20.010753
ORF852R52IaGaaTa11B.1.36.220.001208
ORF852R52IaGaaTa11B.1.3620.001541
ORF852R52IaGaaTa11B.1.3930.028571
ORF852R52IaGaaTa11B.1.3970.004854
ORF852R52IaGaaTa11B.1.4000.000429
ORF852R52IaGaaTa11B.1.4160.001269
ORF852R52IaGaaTa11B.1.428.30.012821
ORF852R52IaGaaTa11B.1.4390.005917
ORF852R52IaGaaTa11B.1.4560.003268
ORF852R52IaGaaTa11B.1.4680.005714
ORF852R52IaGaaTa11B.1.5210.004975
ORF852R52IaGaaTa11B.1.5300.007143
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