CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = R115L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF8115R115LnonsyncGtcTt198219780.99798228236-28238
ORF8115R115LnonsyncGTcTG198220.0010090828236-28238
ORF8115R115LnonsyncGTcTC198210.00050454128236-28238
ORF8115R115LnonsynCGTTTG198210.00050454128236-28238

Details of the mutation R115L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF8115R115LcGtcTt19781982All0.000378
ORF8115R115LcGTcTG21982All0
ORF8115R115LcGTcTC11982All0
ORF8115R115LCGTTTG11982All0
ORF8115R115LcGtcTt13371338B.1.1.70.001197
ORF8115R115LcGTcTC11338B.1.1.70.000001
ORF8115R115LcGtcTt136136B.1.20.001198
ORF8115R115LcGtcTt3434AY.1030.000211
ORF8115R115LcGtcTt3131B.10.000284
ORF8115R115LcGtcTt2929AY.40.000045
ORF8115R115LcGtcTt2727B.1.10.00049
ORF8115R115LcGtcTt2626P.10.00041
ORF8115R115LcGtcTt2525AY.250.00015
ORF8115R115LcGtcTt2121B.1.3670.01664
ORF8115R115LcGtcTt2020B.1.258.70.038241
ORF8115R115LcGtcTt1515AY.260.000425
ORF8115R115LcGtcTt1515AY.430.000066
ORF8115R115LcGtcTt1414B.1.617.20.000053
ORF8115R115LcGtcTt1111B.1.1.5190.000437
ORF8115R115LcGtcTt1010AY.1190.000353
ORF8115R115LcGtcTt1010B.1.2350.025189
ORF8115R115LcGtcTt1010B.1.3510.000297
ORF8115R115LcGtcTt1010B.1.5960.000871
ORF8115R115LcGtcTt99AY.440.000055
ORF8115R115LcGtcTt99AY.470.00028
ORF8115R115LcGtcTt88B.1.1770.000105
ORF8115R115LcGtcTt77B.1.2210.000497
ORF8115R115LcGtcTt55B.1.1600.000156
ORF8115R115LcGtcTt55B.1.2580.000333
ORF8115R115LcGtcTt55B.1.5260.000118
ORF8115R115LcGtcTt44A.10.001127
ORF8115R115LcGtcTt44AY.200.000155
ORF8115R115LcGtcTt44AY.30.00004
ORF8115R115LcGtcTt44AY.4.20.000087
ORF8115R115LcGtcTt44B.1.1.10.001307
ORF8115R115LcGtcTt44B.1.438.10.000429
ORF8115R115LcGtcTt44B.1.5250.000453
ORF8115R115LcGtcTt44B.1.6090.001918
ORF8115R115LcGtcTt44P.1.170.000647
ORF8115R115LcGtcTt33AY.390.000074
ORF8115R115LcGtcTt33AY.420.000121
ORF8115R115LcGtcTt33AY.50.000062
ORF8115R115LcGtcTt33AY.740.000347
ORF8115R115LcGtcTt33B0.000383
ORF8115R115LcGtcTt33B.1.1.2710.166667
ORF8115R115LcGtcTt33B.1.3110.000824
ORF8115R115LcGtcTt23B.1.4270.000101
ORF8115R115LcGTcTG13B.1.4270.00005
ORF8115R115LcGtcTt33B.1.466.20.001174
ORF8115R115LcGtcTt33C.370.000348
ORF8115R115LcGtcTt22AY.60.000082
ORF8115R115LcGtcTt22AY.610.00021
ORF8115R115LcGtcTt22AY.630.000774
ORF8115R115LcGtcTt22AZ.30.00304
ORF8115R115LcGtcTt22B.1.1.3180.000604
ORF8115R115LcGtcTt22B.1.177.240.002591
ORF8115R115LcGtcTt22B.1.220.002635
ORF8115R115LcGtcTt22B.1.3690.00057
ORF8115R115LcGtcTt22B.1.3890.002004
ORF8115R115LcGtcTt22B.1.4990.002101
ORF8115R115LcGtcTt22B.1.5050.008772
ORF8115R115LcGtcTt22B.1.6210.000177
ORF8115R115LcGtcTt22P.1.140.000096
ORF8115R115LcGtcTt22Q.30.00029
ORF8115R115LcGtcTt22Q.80.00033
ORF8115R115LcGtcTt11A0.000387
ORF8115R115LcGtcTt11A.20.000662
ORF8115R115LcGtcTt11AY.1000.000046
ORF8115R115LcGtcTt11AY.1110.000183
ORF8115R115LcGtcTt11AY.190.00114
ORF8115R115LcGtcTt11AY.39.1.10.000725
ORF8115R115LcGtcTt11AY.46.60.000072
ORF8115R115LcGtcTt11AY.7.20.000559
ORF8115R115LcGtcTt11AY.75.10.00018
ORF8115R115LcGtcTt11AY.810.001992
ORF8115R115LcGtcTt11AY.840.000437
ORF8115R115LcGtcTt11AY.9.10.000084
ORF8115R115LcGtcTt11AY.99.10.001553
ORF8115R115LcGtcTt11AZ.10.000867
ORF8115R115LcGtcTt11AZ.20.000821
ORF8115R115LcGtcTt11AZ.60.008403
ORF8115R115LcGtcTt11B.1.1.1320.014925
ORF8115R115LcGtcTt11B.1.1.2140.000055
ORF8115R115LcGtcTt11B.1.1.2980.000862
ORF8115R115LcGtcTt11B.1.1.3060.000438
ORF8115R115LcGtcTt11B.1.1.3070.002532
ORF8115R115LcGTcTG11B.1.1.3150.008475
ORF8115R115LcGtcTt11B.1.1.3160.000925
ORF8115R115LcGtcTt11B.1.1.3260.001761
ORF8115R115LcGtcTt11B.1.1.3720.000689
ORF8115R115LcGtcTt11B.1.1.3730.02381
ORF8115R115LcGtcTt11B.1.1.390.00051
ORF8115R115LcGtcTt11B.1.1.3980.003226
ORF8115R115LcGtcTt11B.1.1.4110.014706
ORF8115R115LcGtcTt11B.1.1.460.004367
ORF8115R115LcGtcTt11B.1.1120.005181
ORF8115R115LcGtcTt11B.1.1200.007692
ORF8115R115LcGtcTt11B.1.177.210.000076
ORF8115R115LcGtcTt11B.1.177.70.000165
ORF8115R115LCGTTTG11B.1.177.730.000566
ORF8115R115LcGtcTt11B.1.2130.014925
ORF8115R115LcGtcTt11B.1.2140.003663
ORF8115R115LcGtcTt11B.1.2340.000132
ORF8115R115LcGtcTt11B.1.2400.000216
ORF8115R115LcGtcTt11B.1.258.170.000104
ORF8115R115LcGtcTt11B.1.3200.001245
ORF8115R115LcGtcTt11B.1.351.20.000303
ORF8115R115LcGtcTt11B.1.360.000146
ORF8115R115LcGtcTt11B.1.4000.000429
ORF8115R115LcGtcTt11B.1.4090.000781
ORF8115R115LcGtcTt11B.1.4290.000024
ORF8115R115LcGtcTt11B.1.440.008333
ORF8115R115LcGtcTt11B.1.5760.000907
ORF8115R115LcGtcTt11B.1.5770.000687
ORF8115R115LcGtcTt11B.1.617.10.000129
ORF8115R115LcGtcTt11B.1.6280.000352
ORF8115R115LcGtcTt11B.600.015873
ORF8115R115LcGtcTt11C.70.034483
ORF8115R115LcGtcTt11D.20.000075
ORF8115R115LcGtcTt11P.1.17.10.000875
ORF8115R115LcGtcTt11Q.40.000455