CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = P38S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF838P38SnonsynCctTct17601175780.99869328005-28007
ORF838P38SnonsynCcTTcC17601230.0013067428005-28007

Details of the mutation P38S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF838P38SCctTct1757817601All0.003362
ORF838P38SCcTTcC2317601All0.000004
ORF838P38SCctTct1109111092B.1.6210.981765
ORF838P38SCcTTcC111092B.1.6210.000089
ORF838P38SCctTct19531953B.1.621.10.98786
ORF838P38SCctTct10531053B.1.1.70.000943
ORF838P38SCctTct511511B.1.6370.03734
ORF838P38SCctTct312312B.1.1770.004108
ORF838P38SCctTct302302AY.40.00047
ORF838P38SCctTct208208AY.430.000922
ORF838P38SCctTct176176B.10.001612
ORF838P38SCctTct166166B.1.3510.004935
ORF838P38SCctTct147161B.1.617.20.000554
ORF838P38SCcTTcC14161B.1.617.20.000053
ORF838P38SCctTct129129AY.7.10.014538
ORF838P38SCctTct9595AD.20.020801
ORF838P38SCctTct7575AY.1030.000466
ORF838P38SCctTct7575B.1.5260.001763
ORF838P38SCctTct6969AY.4.20.001497
ORF838P38SCctTct5656AY.30.000557
ORF838P38SCctTct5252AY.250.000313
ORF838P38SCctTct5151B.1.20.000449
ORF838P38SCctTct5151Q.20.031288
ORF838P38SCctTct4848AY.330.003205
ORF838P38SCctTct4545B.1.4290.001059
ORF838P38SCctTct4242B.1.1.991
ORF838P38SCctTct3333AY.46.60.002383
ORF838P38SCctTct3131B.1.3660.15122
ORF838P38SCctTct2929AY.1020.000769
ORF838P38SCctTct2929AY.200.001127
ORF838P38SCctTct2929AY.450.003529
ORF838P38SCctTct2828B.1.10.000508
ORF838P38SCctTct2828B.1.2210.001989
ORF838P38SCctTct2727B.1.1600.000842
ORF838P38SCctTct2424AY.460.002498
ORF838P38SCctTct2323B.1.6230.012339
ORF838P38SCctTct2020B.1.1.10.006534
ORF838P38SCctTct1818B.1.258.170.001871
ORF838P38SCctTct1818C.370.002089
ORF838P38SCctTct1616P.10.000252
ORF838P38SCctTct1515AY.3.10.001279
ORF838P38SCctTct1515B.1.4270.000757
ORF838P38SCctTct1414AY.440.000085
ORF838P38SCctTct1313AY.290.000205
ORF838P38SCctTct1313AY.50.000268
ORF838P38SCctTct1313C.390.245283
ORF838P38SCctTct1212AY.1190.000424
ORF838P38SCctTct1111B0.001406
ORF838P38SCctTct1010AY.260.000283
ORF838P38SCctTct1010AY.9.20.000367
ORF838P38SCctTct1010AZ.30.015198
ORF838P38SCctTct99AY.39.10.000357
ORF838P38SCctTct99B.1.1.2740.045455
ORF838P38SCctTct99P.1.140.00043
ORF838P38SCctTct77AY.390.000173
ORF838P38SCctTct77AZ.10.006071
ORF838P38SCctTct77B.1.1.330.002946
ORF838P38SCctTct77B.1.1.5190.000278
ORF838P38SCctTct77B.1.177.120.001062
ORF838P38SCctTct77P.1.150.001626
ORF838P38SCctTct66AY.9.10.000502
ORF838P38SCctTct66AY.98.10.000291
ORF838P38SCctTct66B.1.177.860.001101
ORF838P38SCctTct66B.400.002186
ORF838P38SCctTct66Q.80.000989
ORF838P38SCcTTcC55AY.1000.00023
ORF838P38SCctTct45AY.1170.000338
ORF838P38SCcTTcC15AY.1170.000085
ORF838P38SCctTct55AY.360.000741
ORF838P38SCctTct55AY.410.00147
ORF838P38SCctTct55B.1.221.30.004167
ORF838P38SCctTct44AY.1200.000149
ORF838P38SCctTct44AY.230.000279
ORF838P38SCctTct44AY.23.10.001669
ORF838P38SCctTct44AY.340.000388
ORF838P38SCctTct44AY.60.000165
ORF838P38SCctTct44AY.750.000224
ORF838P38SCctTct44AY.90.00027
ORF838P38SCctTct44B.1.1.2840.00043
ORF838P38SCctTct44B.1.177.730.002265
ORF838P38SCctTct44B.1.351.50.002398
ORF838P38SCctTct44B.1.4090.003125
ORF838P38SCctTct44B.1.5170.001708
ORF838P38SCctTct44D.20.0003
ORF838P38SCctTct33A0.001161
ORF838P38SCctTct33AY.1100.000338
ORF838P38SCctTct33AY.1180.000188
ORF838P38SCctTct33AY.29.10.000662
ORF838P38SCctTct33AY.300.001187
ORF838P38SCctTct33AY.70.000588
ORF838P38SCctTct33AY.980.000237
ORF838P38SCctTct33B.1.1.280.000934
ORF838P38SCctTct33B.1.1.3150.025424
ORF838P38SCctTct33B.1.1.520.036585
ORF838P38SCctTct33B.1.1570.008955
ORF838P38SCctTct33B.1.177.810.000568
ORF838P38SCctTct33B.1.2580.0002
ORF838P38SCctTct33B.1.258.140.002941
ORF838P38SCctTct33B.1.36.180.001261
ORF838P38SCctTct33B.1.36.380.004926
ORF838P38SCctTct33B.1.438.10.000322
ORF838P38SCctTct33B.1.4700.004213
ORF838P38SCctTct33B.1.5250.000339
ORF838P38SCctTct33B.1.5330.028846
ORF838P38SCctTct33B.1.5410.013274
ORF838P38SCctTct33Q.10.000379
ORF838P38SCctTct22A.20.001324
ORF838P38SCctTct22A.2.50.000998
ORF838P38SCctTct22AY.1130.000285
ORF838P38SCctTct22AY.320.001065
ORF838P38SCctTct22AY.4.2.10.000298
ORF838P38SCctTct22AY.4.50.000215
ORF838P38SCctTct22AY.420.00008
ORF838P38SCctTct22AY.46.10.002053
ORF838P38SCctTct22AY.470.000062
ORF838P38SCctTct22AY.540.000191
ORF838P38SCctTct22AY.670.000929
ORF838P38SCctTct22AY.730.001331
ORF838P38SCctTct22AY.930.000546
ORF838P38SCctTct22AY.99.10.003106
ORF838P38SCctTct22AY.99.20.000184
ORF838P38SCctTct22B.1.1.2070.002364
ORF838P38SCctTct22B.1.1.2140.000111
ORF838P38SCctTct22B.1.1.2200.003717
ORF838P38SCctTct22B.1.1.3980.006452
ORF838P38SCctTct22B.1.1310.017544
ORF838P38SCctTct22B.1.177.600.000437
ORF838P38SCctTct22B.1.2400.000431
ORF838P38SCctTct22B.1.2800.014286
ORF838P38SCctTct22B.1.2820.029851
ORF838P38SCctTct22B.1.4220.001625
ORF838P38SCctTct22B.1.5960.000174
ORF838P38SCctTct22B.1.80.003945
ORF838P38SCctTct22P.1.120.000968
ORF838P38SCctTct22P.1.70.000639
ORF838P38SCctTct11A.2.20.001689
ORF838P38SCctTct11A.50.001923
ORF838P38SCctTct11AD.10.004115
ORF838P38SCctTct11AL.10.012987
ORF838P38SCctTct11AT.10.005128
ORF838P38SCctTct11AY.1050.000643
ORF838P38SCctTct11AY.116.10.000311
ORF838P38SCctTct11AY.1210.000135
ORF838P38SCctTct11AY.140.000088
ORF838P38SCctTct11AY.160.00038
ORF838P38SCctTct11AY.16.10.00047
ORF838P38SCctTct11AY.20.000356
ORF838P38SCctTct11AY.350.000233
ORF838P38SCctTct11AY.380.000499
ORF838P38SCctTct11AY.4.30.000842
ORF838P38SCctTct11AY.46.40.000165
ORF838P38SCctTct11AY.46.50.000198
ORF838P38SCctTct11AY.5.10.003759
ORF838P38SCctTct11AY.5.30.000337
ORF838P38SCctTct11AY.5.40.000277
ORF838P38SCctTct11AY.530.000288
ORF838P38SCctTct11AY.590.00053
ORF838P38SCctTct11AY.610.000105
ORF838P38SCctTct11AY.640.000595
ORF838P38SCcTTcC11AY.690.000187
ORF838P38SCctTct11AY.7.20.000559
ORF838P38SCctTct11AY.710.000475
ORF838P38SCctTct11AY.75.10.00018
ORF838P38SCcTTcC11AY.770.001127
ORF838P38SCctTct11AY.810.001992
ORF838P38SCctTct11AY.870.000833
ORF838P38SCctTct11AY.920.000287
ORF838P38SCctTct11AY.970.001701
ORF838P38SCctTct11AY.990.001049
ORF838P38SCctTct11B.1.1.2220.000204
ORF838P38SCctTct11B.1.1.2320.001815
ORF838P38SCctTct11B.1.1.2360.006897
ORF838P38SCctTct11B.1.1.2390.032258
ORF838P38SCctTct11B.1.1.3110.000358
ORF838P38SCctTct11B.1.1.3170.000412
ORF838P38SCctTct11B.1.1.3690.000446
ORF838P38SCctTct11B.1.1.3720.000689
ORF838P38SCctTct11B.1.1.5260.003546
ORF838P38SCctTct11B.1.1.630.000386
ORF838P38SCctTct11B.1.1.830.00271
ORF838P38SCctTct11B.1.1080.005814
ORF838P38SCctTct11B.1.1400.018868
ORF838P38SCctTct11B.1.1470.000756
ORF838P38SCctTct11B.1.1670.007812
ORF838P38SCctTct11B.1.177.160.000664
ORF838P38SCctTct11B.1.177.330.001645
ORF838P38SCctTct11B.1.177.510.004566
ORF838P38SCctTct11B.1.177.540.000606
ORF838P38SCctTct11B.1.177.70.000165
ORF838P38SCctTct11B.1.177.820.000477
ORF838P38SCctTct11B.1.2060.000816
ORF838P38SCctTct11B.1.2320.000537
ORF838P38SCctTct11B.1.2340.000132
ORF838P38SCctTct11B.1.258.110.000396
ORF838P38SCctTct11B.1.3110.000275
ORF838P38SCctTct11B.1.3190.003049
ORF838P38SCctTct11B.1.3240.001605
ORF838P38SCctTct11B.1.3360.002439
ORF838P38SCctTct11B.1.3670.000792
ORF838P38SCctTct11B.1.3690.000285
ORF838P38SCctTct11B.1.3910.001127
ORF838P38SCctTct11B.1.3960.000706
ORF838P38SCctTct11B.1.3990.001934
ORF838P38SCctTct11B.1.4590.004082
ORF838P38SCctTct11B.1.466.20.000391
ORF838P38SCctTct11B.1.4690.00361
ORF838P38SCctTct11B.1.4990.00105
ORF838P38SCctTct11B.1.5750.000303
ORF838P38SCctTct11B.1.5890.007576
ORF838P38SCctTct11B.1.5950.000261
ORF838P38SCctTct11B.1.5990.00365
ORF838P38SCctTct11B.1.6060.006024
ORF838P38SCctTct11B.1.6090.000479
ORF838P38SCctTct11B.1.617.30.002985
ORF838P38SCctTct11B.1.6280.000352
ORF838P38SCctTct11B.1.6300.005236
ORF838P38SCctTct11B.1.6330.041667
ORF838P38SCctTct11B.1.6340.003425
ORF838P38SCctTct11B.1.6380.052632
ORF838P38SCctTct11C.40.01
ORF838P38SCctTct11P.1.160.000374
ORF838P38SCctTct11P.1.170.000162
ORF838P38SCctTct11P.20.000187
ORF838P38SCctTct11Q.30.000145
ORF838P38SCctTct11Q.70.001111