CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = I9I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF89I9IsynatCatT10368102420.98784727918-27920
ORF89I9IsynatCatA103681260.012152827918-27920

Details of the mutation I9I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF89I9IatCatT1024210368All0.001959
ORF89I9IatCatA12610368All0.000024
ORF89I9IatCatT32813281B.1.3110.900879
ORF89I9IatCatT845853AY.40.001315
ORF89I9IatCatA8853AY.40.000012
ORF89I9IatCatT586586B.1.258.160.959083
ORF89I9IatCatT437437AY.1190.01543
ORF89I9IatCatT431431AY.46.60.031121
ORF89I9IatCatT332332AY.60.013655
ORF89I9IatCatT285292B.1.1.70.000255
ORF89I9IatCatA7292B.1.1.70.000006
ORF89I9IatCatT266269B.1.2580.017701
ORF89I9IatCatA3269B.1.2580.0002
ORF89I9IatCatT252265B.1.617.20.000949
ORF89I9IatCatA13265B.1.617.20.000049
ORF89I9IatCatT261263B.1.10.004735
ORF89I9IatCatA2263B.1.10.000036
ORF89I9IatCatT186192AY.440.001132
ORF89I9IatCatA6192AY.440.000037
ORF89I9IatCatT189190AY.430.000837
ORF89I9IatCatA1190AY.430.000004
ORF89I9IatCatT178178AY.99.20.016404
ORF89I9IatCatT167169AY.30.001661
ORF89I9IatCatA2169AY.30.00002
ORF89I9IatCatT154155AY.250.000926
ORF89I9IatCatA1155AY.250.000006
ORF89I9IatCatT152152B.1.1770.002001
ORF89I9IatCatT139139AY.700.028982
ORF89I9IatCatT135138AY.1030.000838
ORF89I9IatCatA3138AY.1030.000019
ORF89I9IatCatT127133B.10.001163
ORF89I9IatCatA6133B.10.000055
ORF89I9IatCatT8686B.1.2890.228723
ORF89I9IatCatT8080B.1.177.480.25
ORF89I9IatCatT7070AY.4.20.001518
ORF89I9IatCatT6060AY.1020.001591
ORF89I9IatCatT5656AY.260.001585
ORF89I9IatCatT5353AY.4.10.039086
ORF89I9IatCatT5353B.1.1.5190.002105
ORF89I9IatCatT4646AY.1140.010631
ORF89I9IatCatT4242B.1.1.5240.875
ORF89I9IatCatT3838P.1.170.006147
ORF89I9IatCatT3737B.1.1600.001154
ORF89I9IatCatT3636AY.470.00112
ORF89I9IatCatT3636AY.740.004163
ORF89I9IatCatT3333AY.330.002204
ORF89I9IatCatT2931AY.390.000717
ORF89I9IatCatA231AY.390.000049
ORF89I9IatCatT3030AY.1170.002535
ORF89I9IatCatT3030B.1.177.210.002294
ORF89I9IatCatA2828B.1.1.3540.122807
ORF89I9IatCatT2727B.1.3990.052224
ORF89I9IatCatT2525B.1.20.00022
ORF89I9IatCatT2424AY.290.000379
ORF89I9IatCatT2123P.10.000331
ORF89I9IatCatA223P.10.000032
ORF89I9IatCatT2121AY.1210.002842
ORF89I9IatCatT2121AY.230.001465
ORF89I9IatCatT2020B.1.2340.002639
ORF89I9IatCatT2020B.1.3460.026212
ORF89I9IatCatT2020N.80.625
ORF89I9IatCatT1818B.1.1.2050.066914
ORF89I9IatCatT1818B.1.177.100.015803
ORF89I9IatCatA1317AY.240.005603
ORF89I9IatCatT417AY.240.001724
ORF89I9IatCatT1616D.20.001201
ORF89I9IatCatT1515AY.1000.00069
ORF89I9IatCatT1515B.1.1.3060.006576
ORF89I9IatCatT1515B.1.2430.001044
ORF89I9IatCatT1414AY.50.000289
ORF89I9IatCatT1414B.1.1.2220.002856
ORF89I9IatCatT1313AY.4.2.10.001937
ORF89I9IatCatT1313B.1.2180.06701
ORF89I9IatCatT1313B.1.5260.000306
ORF89I9IatCatT1212AY.1180.000752
ORF89I9IatCatT1212AY.420.000483
ORF89I9IatCatT1212AY.450.00146
ORF89I9IatCatT1212AY.750.000672
ORF89I9IatCatT1212B.1.1.630.00463
ORF89I9IatCatT1212B.1.1110.014101
ORF89I9IatCatT1212B.1.6020.078431
ORF89I9IatCatT1111AY.3.10.000938
ORF89I9IatCatT1010AY.1200.000372
ORF89I9IatCatT910AY.610.000943
ORF89I9IatCatA110AY.610.000105
ORF89I9IatCatT1010AY.98.10.000484
ORF89I9IatCatT1010B.1.1.1350.046948
ORF89I9IatCatA1010B.1.1.1960.057143
ORF89I9IatCatT1010B.1.1.2770.007587
ORF89I9IatCatT1010B.1.2100.021322
ORF89I9IatCatT1010B.1.258.170.00104
ORF89I9IatCatT99AY.670.004178
ORF89I9IatCatT88AY.200.000311
ORF89I9IatCatT88AY.34.10.00408
ORF89I9IatCatT88AY.39.10.000317
ORF89I9IatCatT88AY.410.002352
ORF89I9IatCatT88AY.5.40.002214
ORF89I9IatCatT78AY.640.004167
ORF89I9IatCatA18AY.640.000595
ORF89I9IatCatT88B.1.1.2160.007124
ORF89I9IatCatT88B.1.1.3120.015296
ORF89I9IatCatT88B.1.177.620.009535
ORF89I9IatCatT88B.1.3960.005646
ORF89I9IatCatT77AD.20.001533
ORF89I9IatCatT77AY.1130.000997
ORF89I9IatCatT77AY.340.000679
ORF89I9IatCatT77AY.540.000667
ORF89I9IatCatA57AY.90.000338
ORF89I9IatCatT27AY.90.000135
ORF89I9IatCatT77B.1.1.10.002287
ORF89I9IatCatT77B.1.1.500.004752
ORF89I9IatCatT77B.1.177.730.003964
ORF89I9IatCatT77B.1.360.001021
ORF89I9IatCatT77B.1.3810.054688
ORF89I9IatCatT77B.1.5960.00061
ORF89I9IatCatT77B.1.6210.00062
ORF89I9IatCatT66AY.70.001176
ORF89I9IatCatT66B.1.1.3980.019355
ORF89I9IatCatT66B.1.1.4340.002091
ORF89I9IatCatT66B.1.2790.003082
ORF89I9IatCatT66B.1.4290.000141
ORF89I9IatCatT46B.1.617.10.000516
ORF89I9IatCatA26B.1.617.10.000258
ORF89I9IatCatT66C.370.000696
ORF89I9IatCatT55AY.360.000741
ORF89I9IatCatT55AY.370.00158
ORF89I9IatCatA35AY.620.001307
ORF89I9IatCatT25AY.620.000871
ORF89I9IatCatT55AY.840.002187
ORF89I9IatCatT55AY.9.20.000184
ORF89I9IatCatT55AY.920.001436
ORF89I9IatCatT55B.1.1.3260.008803
ORF89I9IatCatT45B.1.2210.000284
ORF89I9IatCatA15B.1.2210.000071
ORF89I9IatCatT55B.1.438.10.000536
ORF89I9IatCatT55B.1.5820.002453
ORF89I9IatCatT44AY.140.000352
ORF89I9IatCatT44AY.590.002119
ORF89I9IatCatT44AY.710.0019
ORF89I9IatCatT44AY.980.000316
ORF89I9IatCatA24B0.000256
ORF89I9IatCatT24B0.000256
ORF89I9IatCatT44B.1.1.100.004459
ORF89I9IatCatT44B.1.1.3390.042105
ORF89I9IatCatT44B.1.177.160.002658
ORF89I9IatCatT44B.1.3510.000119
ORF89I9IatCatT44Q.80.00066
ORF89I9IatCatT33AY.1060.001005
ORF89I9IatCatT33AY.120.000948
ORF89I9IatCatT33AY.130.000483
ORF89I9IatCatT33AY.320.001597
ORF89I9IatCatT33AY.5.30.001012
ORF89I9IatCatT33AY.9.10.000251
ORF89I9IatCatT33AY.940.001328
ORF89I9IatCatT33B.1.1.2140.000166
ORF89I9IatCatT33B.1.1.250.001706
ORF89I9IatCatT33B.1.1.3110.001074
ORF89I9IatCatT33B.1.1.5230.004687
ORF89I9IatCatT33B.1.1190.031579
ORF89I9IatCatT33B.1.4270.000151
ORF89I9IatCatT33B.1.5770.002062
ORF89I9IatCatT33B.1.6280.001057
ORF89I9IatCatT33P.1.140.000143
ORF89I9IatCatT22AY.1050.001286
ORF89I9IatCatT22AY.1100.000225
ORF89I9IatCatT22AY.16.10.00094
ORF89I9IatCatT22AY.23.10.000835
ORF89I9IatCatT22AY.300.000791
ORF89I9IatCatT22AY.380.000999
ORF89I9IatCatT22AY.460.000208
ORF89I9IatCatT22AY.46.20.001271
ORF89I9IatCatT22AY.46.40.000329
ORF89I9IatCatT22AY.530.000575
ORF89I9IatCatT22AY.690.000373
ORF89I9IatCatT22AY.75.10.000361
ORF89I9IatCatT22AY.780.003082
ORF89I9IatCatT22AY.790.002421
ORF89I9IatCatT22AY.850.000854
ORF89I9IatCatT22AY.890.009804
ORF89I9IatCatT22B.1.1.1590.009346
ORF89I9IatCatT22B.1.1.1890.003026
ORF89I9IatCatT22B.1.1.2650.006309
ORF89I9IatCatT22B.1.1.3220.017544
ORF89I9IatCatT22B.1.1.390.001019
ORF89I9IatCatT22B.1.1.3970.004505
ORF89I9IatCatT22B.1.177.70.00033
ORF89I9IatCatT22B.1.214.20.001199
ORF89I9IatCatT22B.1.2220.003384
ORF89I9IatCatT22B.1.2400.000431
ORF89I9IatCatT22B.1.2410.001623
ORF89I9IatCatT22B.1.3690.00057
ORF89I9IatCatT22B.1.5650.001621
ORF89I9IatCatT22B.1.5800.00813
ORF89I9IatCatT22B.1.6090.000959
ORF89I9IatCatT22B.1.6370.000146
ORF89I9IatCatA12B.30.000831
ORF89I9IatCatT12B.30.000831
ORF89I9IatCatT22B.450.007663
ORF89I9IatCatT22B.550.0059
ORF89I9IatCatA12B.60.00091
ORF89I9IatCatT12B.60.00091
ORF89I9IatCatT22P.1.70.000639
ORF89I9IatCatT22Q.30.00029
ORF89I9IatCatT110.055556
ORF89I9IatCatT11A.10.000282
ORF89I9IatCatT11A.2.5.10.004808
ORF89I9IatCatT11A.250.018182
ORF89I9IatCatT11AT.10.005128
ORF89I9IatCatT11AY.1080.001103
ORF89I9IatCatT11AY.1160.000287
ORF89I9IatCatT11AY.180.010101
ORF89I9IatCatT11AY.210.001898
ORF89I9IatCatT11AY.280.00189
ORF89I9IatCatT11AY.29.10.000221
ORF89I9IatCatT11AY.46.30.000934
ORF89I9IatCatT11AY.46.50.000198
ORF89I9IatCatA11AY.570.000656
ORF89I9IatCatT11AY.650.000533
ORF89I9IatCatT11AY.7.20.000559
ORF89I9IatCatT11B.1.1.1170.009709
ORF89I9IatCatT11B.1.1.1530.001095
ORF89I9IatCatT11B.1.1.1540.04
ORF89I9IatCatT11B.1.1.160.055556
ORF89I9IatCatT11B.1.1.1940.00495
ORF89I9IatCatT11B.1.1.2440.015385
ORF89I9IatCatT11B.1.1.2530.002506
ORF89I9IatCatT11B.1.1.280.000311
ORF89I9IatCatT11B.1.1.2910.000742
ORF89I9IatCatT11B.1.1.2970.002237
ORF89I9IatCatT11B.1.1.3030.002762
ORF89I9IatCatT11B.1.1.3070.002532
ORF89I9IatCatT11B.1.1.3160.000925
ORF89I9IatCatT11B.1.1.330.000421
ORF89I9IatCatT11B.1.1.3330.001076
ORF89I9IatCatT11B.1.1.3710.010417
ORF89I9IatCatT11B.1.1.3910.008547
ORF89I9IatCatT11B.1.1.4060.006494
ORF89I9IatCatT11B.1.1.4130.006897
ORF89I9IatCatT11B.1.1.4500.034483
ORF89I9IatCatT11B.1.1.480.002874
ORF89I9IatCatT11B.1.1.5060.037037
ORF89I9IatCatT11B.1.1.510.001718
ORF89I9IatCatT11B.1.1.5250.005464
ORF89I9IatCatT11B.1.1.5280.004808
ORF89I9IatCatT11B.1.1.980.018519
ORF89I9IatCatT11B.1.110.30.000718
ORF89I9IatCatT11B.1.1180.006711
ORF89I9IatCatT11B.1.160.200.008929
ORF89I9IatCatT11B.1.177.810.000189
ORF89I9IatCatT11B.1.1950.005025
ORF89I9IatCatT11B.1.2060.000816
ORF89I9IatCatT11B.1.258.110.000396
ORF89I9IatCatT11B.1.258.140.00098
ORF89I9IatCatT11B.1.2940.032258
ORF89I9IatCatT11B.1.3130.006579
ORF89I9IatCatT11B.1.3200.001245
ORF89I9IatCatT11B.1.3280.03125
ORF89I9IatCatT11B.1.3320.003497
ORF89I9IatCatT11B.1.3490.000715
ORF89I9IatCatT11B.1.3560.001727
ORF89I9IatCatT11B.1.36.80.001
ORF89I9IatCatT11B.1.3670.000792
ORF89I9IatCatT11B.1.4000.000429
ORF89I9IatCatT11B.1.4080.00369
ORF89I9IatCatT11B.1.4220.000812
ORF89I9IatCatT11B.1.4280.00102
ORF89I9IatCatT11B.1.4410.009615
ORF89I9IatCatT11B.1.4430.004673
ORF89I9IatCatT11B.1.466.20.000391
ORF89I9IatCatT11B.1.4700.001404
ORF89I9IatCatT11B.1.4990.00105
ORF89I9IatCatT11B.1.5600.00463
ORF89I9IatCatT11B.1.5610.000397
ORF89I9IatCatT11B.1.5950.000261
ORF89I9IatCatT11B.1.6000.005848
ORF89I9IatCatT11B.1.6230.000536
ORF89I9IatCatT11B.290.003509
ORF89I9IatCatA11B.4.10.018868
ORF89I9IatCatT11N.100.029412
ORF89I9IatCatT11N.50.001767
ORF89I9IatCatT11N.90.005952
ORF89I9IatCatT11P.1.130.000898
ORF89I9IatCatT11P.1.150.000232
ORF89I9IatCatT11P.20.000187
ORF89I9IatCatT11P.70.004367