CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 65 | A65T | nonsyn | GcT | AcA | 2509 | 1518 | 0.605022 | 28086-28088 | |
ORF8 | 65 | A65T | nonsyn | Gct | Act | 2509 | 986 | 0.392985 | 28086-28088 | |
ORF8 | 65 | A65T | nonsyn | GcT | AcG | 2509 | 5 | 0.00199283 | 28086-28088 |
Details of the mutation A65T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 65 | A65T | GcT | AcA | 1518 | 2509 | All | 0.00029 |
ORF8 | 65 | A65T | Gct | Act | 986 | 2509 | All | 0.000189 |
ORF8 | 65 | A65T | GcT | AcG | 5 | 2509 | All | 0.000001 |
ORF8 | 65 | A65T | GcT | AcA | 194 | 287 | AY.43 | 0.00086 |
ORF8 | 65 | A65T | Gct | Act | 93 | 287 | AY.43 | 0.000412 |
ORF8 | 65 | A65T | GcT | AcA | 173 | 230 | B.1.1.7 | 0.000155 |
ORF8 | 65 | A65T | Gct | Act | 57 | 230 | B.1.1.7 | 0.000051 |
ORF8 | 65 | A65T | GcT | AcA | 119 | 186 | AY.12 | 0.037611 |
ORF8 | 65 | A65T | Gct | Act | 67 | 186 | AY.12 | 0.021176 |
ORF8 | 65 | A65T | GcT | AcA | 103 | 182 | B.1 | 0.000943 |
ORF8 | 65 | A65T | Gct | Act | 79 | 182 | B.1 | 0.000724 |
ORF8 | 65 | A65T | GcT | AcA | 64 | 108 | B.1.2 | 0.000564 |
ORF8 | 65 | A65T | Gct | Act | 44 | 108 | B.1.2 | 0.000387 |
ORF8 | 65 | A65T | GcT | AcA | 67 | 95 | AY.39 | 0.001656 |
ORF8 | 65 | A65T | Gct | Act | 28 | 95 | AY.39 | 0.000692 |
ORF8 | 65 | A65T | Gct | Act | 46 | 87 | B.1.617.2 | 0.000173 |
ORF8 | 65 | A65T | GcT | AcA | 41 | 87 | B.1.617.2 | 0.000154 |
ORF8 | 65 | A65T | Gct | Act | 42 | 80 | AY.4 | 0.000065 |
ORF8 | 65 | A65T | GcT | AcA | 37 | 80 | AY.4 | 0.000058 |
ORF8 | 65 | A65T | GcT | AcG | 1 | 80 | AY.4 | 0.000002 |
ORF8 | 65 | A65T | GcT | AcA | 38 | 72 | AY.102 | 0.001008 |
ORF8 | 65 | A65T | Gct | Act | 34 | 72 | AY.102 | 0.000901 |
ORF8 | 65 | A65T | GcT | AcA | 44 | 70 | AY.121 | 0.005954 |
ORF8 | 65 | A65T | Gct | Act | 26 | 70 | AY.121 | 0.003518 |
ORF8 | 65 | A65T | GcT | AcA | 30 | 53 | B.1.1 | 0.000544 |
ORF8 | 65 | A65T | Gct | Act | 23 | 53 | B.1.1 | 0.000417 |
ORF8 | 65 | A65T | Gct | Act | 48 | 50 | B.1.1.519 | 0.001906 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 50 | B.1.1.519 | 0.000079 |
ORF8 | 65 | A65T | GcT | AcA | 34 | 48 | AY.5 | 0.000702 |
ORF8 | 65 | A65T | Gct | Act | 14 | 48 | AY.5 | 0.000289 |
ORF8 | 65 | A65T | Gct | Act | 35 | 47 | AY.25 | 0.000211 |
ORF8 | 65 | A65T | GcT | AcA | 12 | 47 | AY.25 | 0.000072 |
ORF8 | 65 | A65T | GcT | AcA | 27 | 44 | AY.44 | 0.000164 |
ORF8 | 65 | A65T | Gct | Act | 17 | 44 | AY.44 | 0.000103 |
ORF8 | 65 | A65T | GcT | AcA | 24 | 35 | B.1.517 | 0.010248 |
ORF8 | 65 | A65T | Gct | Act | 11 | 35 | B.1.517 | 0.004697 |
ORF8 | 65 | A65T | GcT | AcA | 20 | 33 | AY.103 | 0.000124 |
ORF8 | 65 | A65T | Gct | Act | 13 | 33 | AY.103 | 0.000081 |
ORF8 | 65 | A65T | GcT | AcA | 22 | 28 | AY.33 | 0.001469 |
ORF8 | 65 | A65T | Gct | Act | 6 | 28 | AY.33 | 0.000401 |
ORF8 | 65 | A65T | Gct | Act | 16 | 24 | P.1 | 0.000252 |
ORF8 | 65 | A65T | GcT | AcA | 8 | 24 | P.1 | 0.000126 |
ORF8 | 65 | A65T | GcT | AcA | 14 | 23 | B.1.243 | 0.000974 |
ORF8 | 65 | A65T | Gct | Act | 9 | 23 | B.1.243 | 0.000626 |
ORF8 | 65 | A65T | Gct | Act | 12 | 21 | B.1.258 | 0.000799 |
ORF8 | 65 | A65T | GcT | AcA | 9 | 21 | B.1.258 | 0.000599 |
ORF8 | 65 | A65T | GcT | AcA | 11 | 19 | AY.26 | 0.000311 |
ORF8 | 65 | A65T | Gct | Act | 8 | 19 | AY.26 | 0.000226 |
ORF8 | 65 | A65T | GcT | AcA | 10 | 19 | B.1.526 | 0.000235 |
ORF8 | 65 | A65T | Gct | Act | 9 | 19 | B.1.526 | 0.000212 |
ORF8 | 65 | A65T | Gct | Act | 13 | 19 | B.1.596 | 0.001133 |
ORF8 | 65 | A65T | GcT | AcA | 6 | 19 | B.1.596 | 0.000523 |
ORF8 | 65 | A65T | GcT | AcA | 14 | 18 | AY.9.2 | 0.000514 |
ORF8 | 65 | A65T | Gct | Act | 4 | 18 | AY.9.2 | 0.000147 |
ORF8 | 65 | A65T | GcT | AcA | 13 | 18 | B.1.1.486 | 0.020505 |
ORF8 | 65 | A65T | Gct | Act | 5 | 18 | B.1.1.486 | 0.007886 |
ORF8 | 65 | A65T | GcT | AcA | 15 | 18 | B.1.1.50 | 0.010183 |
ORF8 | 65 | A65T | Gct | Act | 3 | 18 | B.1.1.50 | 0.002037 |
ORF8 | 65 | A65T | GcT | AcA | 9 | 17 | AY.3 | 0.00009 |
ORF8 | 65 | A65T | Gct | Act | 8 | 17 | AY.3 | 0.00008 |
ORF8 | 65 | A65T | GcT | AcA | 10 | 16 | AY.106 | 0.003349 |
ORF8 | 65 | A65T | Gct | Act | 6 | 16 | AY.106 | 0.002009 |
ORF8 | 65 | A65T | GcT | AcA | 10 | 16 | AY.46.6 | 0.000722 |
ORF8 | 65 | A65T | Gct | Act | 6 | 16 | AY.46.6 | 0.000433 |
ORF8 | 65 | A65T | Gct | Act | 8 | 15 | B.1.429 | 0.000188 |
ORF8 | 65 | A65T | GcT | AcA | 7 | 15 | B.1.429 | 0.000165 |
ORF8 | 65 | A65T | GcT | AcA | 9 | 13 | B.1.302 | 0.12 |
ORF8 | 65 | A65T | Gct | Act | 4 | 13 | B.1.302 | 0.053333 |
ORF8 | 65 | A65T | Gct | Act | 6 | 12 | AY.42 | 0.000241 |
ORF8 | 65 | A65T | GcT | AcA | 6 | 12 | AY.42 | 0.000241 |
ORF8 | 65 | A65T | GcT | AcA | 7 | 12 | AY.98.1 | 0.000339 |
ORF8 | 65 | A65T | Gct | Act | 5 | 12 | AY.98.1 | 0.000242 |
ORF8 | 65 | A65T | GcT | AcA | 10 | 11 | AY.46 | 0.001041 |
ORF8 | 65 | A65T | Gct | Act | 1 | 11 | AY.46 | 0.000104 |
ORF8 | 65 | A65T | GcT | AcA | 7 | 11 | B.1.356 | 0.01209 |
ORF8 | 65 | A65T | Gct | Act | 4 | 11 | B.1.356 | 0.006908 |
ORF8 | 65 | A65T | GcT | AcA | 10 | 11 | B.1.620 | 0.009461 |
ORF8 | 65 | A65T | Gct | Act | 1 | 11 | B.1.620 | 0.000946 |
ORF8 | 65 | A65T | GcT | AcA | 6 | 10 | B.1.349 | 0.004289 |
ORF8 | 65 | A65T | Gct | Act | 4 | 10 | B.1.349 | 0.002859 |
ORF8 | 65 | A65T | Gct | Act | 6 | 10 | B.1.427 | 0.000303 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 10 | B.1.427 | 0.000202 |
ORF8 | 65 | A65T | Gct | Act | 5 | 9 | AY.118 | 0.000313 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 9 | AY.118 | 0.000251 |
ORF8 | 65 | A65T | Gct | Act | 7 | 9 | B.1.177 | 0.000092 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 9 | B.1.177 | 0.000026 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 8 | AY.36 | 0.000593 |
ORF8 | 65 | A65T | Gct | Act | 4 | 8 | AY.36 | 0.000593 |
ORF8 | 65 | A65T | Gct | Act | 4 | 8 | AY.4.4 | 0.001637 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 8 | AY.4.4 | 0.001637 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 8 | AY.47 | 0.000156 |
ORF8 | 65 | A65T | Gct | Act | 3 | 8 | AY.47 | 0.000093 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 8 | AY.60 | 0.00469 |
ORF8 | 65 | A65T | Gct | Act | 3 | 8 | AY.60 | 0.002814 |
ORF8 | 65 | A65T | GcT | AcA | 8 | 8 | AY.84 | 0.0035 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 8 | B.1.390 | 0.042553 |
ORF8 | 65 | A65T | Gct | Act | 4 | 8 | B.1.390 | 0.042553 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 8 | Q.5 | 0.084746 |
ORF8 | 65 | A65T | Gct | Act | 3 | 8 | Q.5 | 0.050847 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 7 | AY.1 | 0.001583 |
ORF8 | 65 | A65T | Gct | Act | 3 | 7 | AY.1 | 0.001187 |
ORF8 | 65 | A65T | GcT | AcA | 7 | 7 | AY.4.5 | 0.000752 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 7 | AY.70 | 0.000834 |
ORF8 | 65 | A65T | Gct | Act | 3 | 7 | AY.70 | 0.000626 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 7 | B.1.1.434 | 0.001743 |
ORF8 | 65 | A65T | Gct | Act | 2 | 7 | B.1.1.434 | 0.000697 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 7 | B.1.369 | 0.001141 |
ORF8 | 65 | A65T | Gct | Act | 3 | 7 | B.1.369 | 0.000856 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 6 | AY.16.1 | 0.00188 |
ORF8 | 65 | A65T | Gct | Act | 2 | 6 | AY.16.1 | 0.00094 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 6 | AY.20 | 0.000194 |
ORF8 | 65 | A65T | Gct | Act | 1 | 6 | AY.20 | 0.000039 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | AY.9 | 0.000203 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | AY.9 | 0.000203 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | AY.9.1 | 0.000251 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | AY.9.1 | 0.000251 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | AY.92 | 0.000862 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | AY.92 | 0.000862 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 6 | B.1.1.192 | 0.009238 |
ORF8 | 65 | A65T | Gct | Act | 2 | 6 | B.1.1.192 | 0.004619 |
ORF8 | 65 | A65T | Gct | Act | 6 | 6 | B.1.1.317 | 0.00247 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | B.1.104 | 0.01107 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | B.1.104 | 0.01107 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | B.1.110.3 | 0.002155 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | B.1.110.3 | 0.002155 |
ORF8 | 65 | A65T | Gct | Act | 4 | 6 | B.1.160 | 0.000125 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 6 | B.1.160 | 0.000062 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | B.1.177.44 | 0.001557 |
ORF8 | 65 | A65T | Gct | Act | 2 | 6 | B.1.177.44 | 0.001038 |
ORF8 | 65 | A65T | GcT | AcG | 1 | 6 | B.1.177.44 | 0.000519 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 6 | B.1.367 | 0.001585 |
ORF8 | 65 | A65T | Gct | Act | 2 | 6 | B.1.367 | 0.001585 |
ORF8 | 65 | A65T | GcT | AcG | 2 | 6 | B.1.367 | 0.001585 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 6 | P.1.15 | 0.000697 |
ORF8 | 65 | A65T | Gct | Act | 3 | 6 | P.1.15 | 0.000697 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 5 | AY.100 | 0.000138 |
ORF8 | 65 | A65T | Gct | Act | 2 | 5 | AY.100 | 0.000092 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 5 | AY.61 | 0.000419 |
ORF8 | 65 | A65T | Gct | Act | 1 | 5 | AY.61 | 0.000105 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 5 | B.1.351 | 0.000149 |
ORF8 | 65 | A65T | GcT | AcA | 5 | 5 | B.1.362 | 0.007704 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 5 | B.1.588 | 0.00273 |
ORF8 | 65 | A65T | Gct | Act | 2 | 5 | B.1.588 | 0.00182 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 4 | A.23.1 | 0.002817 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | AY.110 | 0.000225 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.110 | 0.000225 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 4 | AY.113 | 0.000427 |
ORF8 | 65 | A65T | Gct | Act | 1 | 4 | AY.113 | 0.000142 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.116 | 0.000574 |
ORF8 | 65 | A65T | GcT | AcG | 1 | 4 | AY.116 | 0.000287 |
ORF8 | 65 | A65T | Gct | Act | 1 | 4 | AY.116 | 0.000287 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.119 | 0.000071 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | AY.119 | 0.000071 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.120 | 0.000074 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | AY.120 | 0.000074 |
ORF8 | 65 | A65T | Gct | Act | 3 | 4 | AY.39.1 | 0.000119 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 4 | AY.39.1 | 0.00004 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | AY.65 | 0.001066 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.65 | 0.001066 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | AY.75 | 0.000112 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | AY.75 | 0.000112 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 4 | AY.98 | 0.000237 |
ORF8 | 65 | A65T | Gct | Act | 1 | 4 | AY.98 | 0.000079 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 4 | B.1.115 | 0.086957 |
ORF8 | 65 | A65T | GcT | AcA | 4 | 4 | B.1.359 | 0.090909 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 4 | B.1.617.1 | 0.000387 |
ORF8 | 65 | A65T | Gct | Act | 1 | 4 | B.1.617.1 | 0.000129 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | C.36.3 | 0.001134 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | C.36.3 | 0.001134 |
ORF8 | 65 | A65T | Gct | Act | 2 | 4 | P.1.10 | 0.000539 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 4 | P.1.10 | 0.000539 |
ORF8 | 65 | A65T | Gct | Act | 2 | 3 | AY.105 | 0.001286 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 3 | AY.105 | 0.000643 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | AY.23 | 0.000139 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | AY.23 | 0.00007 |
ORF8 | 65 | A65T | Gct | Act | 2 | 3 | AY.32 | 0.001065 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 3 | AY.32 | 0.000532 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | AY.4.2 | 0.000043 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | AY.4.2 | 0.000022 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | AY.5.4 | 0.000553 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | AY.5.4 | 0.000277 |
ORF8 | 65 | A65T | Gct | Act | 2 | 3 | AY.54 | 0.000191 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 3 | AY.54 | 0.000095 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | AY.73 | 0.001331 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | AY.73 | 0.000665 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 3 | AY.75.1 | 0.000541 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | B.1.1.222 | 0.000408 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | B.1.1.222 | 0.000204 |
ORF8 | 65 | A65T | Gct | Act | 2 | 3 | B.1.234 | 0.000264 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 3 | B.1.234 | 0.000132 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | B.1.258.17 | 0.000208 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | B.1.258.17 | 0.000104 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 3 | B.1.409 | 0.002344 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | B.1.479 | 0.076923 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | B.1.479 | 0.038462 |
ORF8 | 65 | A65T | GcT | AcA | 3 | 3 | B.1.505 | 0.013158 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | B.1.619 | 0.001742 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | B.1.619 | 0.000871 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | B.1.637 | 0.000146 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | B.1.637 | 0.000073 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 3 | P.1.1 | 0.000635 |
ORF8 | 65 | A65T | Gct | Act | 1 | 3 | P.1.1 | 0.000318 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | A.3 | 0.002096 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | A.3 | 0.002096 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | AY.117 | 0.000169 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.120.2 | 0.001285 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.120.2 | 0.001285 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.19 | 0.00114 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.19 | 0.00114 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.37 | 0.000316 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.37 | 0.000316 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | AY.45 | 0.000243 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.51 | 0.000909 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.51 | 0.000909 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.53 | 0.000288 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.53 | 0.000288 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.6 | 0.000041 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.6 | 0.000041 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | AY.7.1 | 0.000225 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.91 | 0.00073 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.91 | 0.00073 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | AY.95 | 0.000761 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | AY.95 | 0.000761 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.1.1 | 0.000327 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.1.1 | 0.000327 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.1.409 | 0.005666 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.1.416 | 0.000905 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.1.416 | 0.000905 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.160.11 | 0.005714 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.160.11 | 0.005714 |
ORF8 | 65 | A65T | Gct | Act | 2 | 2 | B.1.177.75 | 0.002081 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.214.2 | 0.001199 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.214.3 | 0.014286 |
ORF8 | 65 | A65T | Gct | Act | 2 | 2 | B.1.221 | 0.000142 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.232 | 0.001075 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.268 | 0.010417 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.268 | 0.010417 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.298 | 0.002114 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.298 | 0.002114 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.320 | 0.001245 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.320 | 0.001245 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.351.2 | 0.000303 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.351.2 | 0.000303 |
ORF8 | 65 | A65T | Gct | Act | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.403 | 0.003268 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.403 | 0.003268 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.436 | 0.002058 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.517.1 | 0.005263 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.517.1 | 0.005263 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.521 | 0.004975 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.521 | 0.004975 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | B.1.525 | 0.000113 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | B.1.525 | 0.000113 |
ORF8 | 65 | A65T | GcT | AcA | 2 | 2 | B.1.577 | 0.001375 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | C.37.1 | 0.002618 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | C.37.1 | 0.002618 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | N.1 | 0.016949 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | N.1 | 0.016949 |
ORF8 | 65 | A65T | Gct | Act | 1 | 2 | P.1.14 | 0.000048 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 2 | P.1.14 | 0.000048 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | A | 0.000387 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | A.1 | 0.000282 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | AD.2 | 0.000219 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AE.1 | 0.011364 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.29 | 0.000016 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.38 | 0.000499 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.49 | 0.003195 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.58 | 0.000907 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.59 | 0.00053 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.71 | 0.000475 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | AY.99 | 0.001049 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.231 | 0.003096 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.275 | 0.011236 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.28 | 0.000311 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.1.282 | 0.011628 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.294 | 0.001266 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.1.326 | 0.001761 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.37 | 0.000193 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.397 | 0.002252 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.526 | 0.003546 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.1.70 | 0.000341 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.177.16 | 0.000664 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.177.62 | 0.001192 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.177.77 | 0.000726 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.214 | 0.003663 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.239 | 0.001221 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.240 | 0.000216 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.258.11 | 0.000396 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.258.14 | 0.00098 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.279 | 0.000514 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.375 | 0.00082 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.385 | 0.010638 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.400 | 0.000429 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.466.2 | 0.000391 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.470 | 0.001404 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.504 | 0.03125 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.554 | 0.004405 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.561 | 0.000397 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.564.1 | 0.001577 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.568 | 0.001111 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.582 | 0.000491 |
ORF8 | 65 | A65T | Gct | Act | 1 | 1 | B.1.595 | 0.000261 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.595.3 | 0.026316 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.1.623 | 0.000536 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | B.35 | 0.007812 |
ORF8 | 65 | A65T | GcT | AcA | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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