CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = A51V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF851A51VnonsyngCtgTt85688568128044-28046

Details of the mutation A51V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF851A51VgCtgTt85688568All0.001639
ORF851A51VgCtgTt929929B.1.1.3331
ORF851A51VgCtgTt721721AY.40.001122
ORF851A51VgCtgTt721721AY.440.004389
ORF851A51VgCtgTt705705B.1.1.70.000631
ORF851A51VgCtgTt563563AY.430.002494
ORF851A51VgCtgTt441441AY.1030.002738
ORF851A51VgCtgTt352352B.1.617.20.001325
ORF851A51VgCtgTt300300B.1.1770.00395
ORF851A51VgCtgTt213213B.1.6280.075053
ORF851A51VgCtgTt189189B.1.20.001664
ORF851A51VgCtgTt170170AY.30.001691
ORF851A51VgCtgTt161161B.1.2790.082691
ORF851A51VgCtgTt157157AY.200.006102
ORF851A51VgCtgTt126126B.1.177.350.087077
ORF851A51VgCtgTt115115B.1.3510.003419
ORF851A51VgCtgTt115115P.10.001812
ORF851A51VgCtgTt104104AY.390.00257
ORF851A51VgCtgTt101101AY.50.002086
ORF851A51VgCtgTt100100B.1.258.110.039635
ORF851A51VgCtgTt9595B.1.1.5190.003773
ORF851A51VgCtgTt8888B.10.000806
ORF851A51VgCtgTt8888P.20.016424
ORF851A51VgCtgTt8080AY.1020.002121
ORF851A51VgCtgTt7878B.1.4290.001835
ORF851A51VgCtgTt7676B.1.1600.00237
ORF851A51VgCtgTt7070AY.290.001104
ORF851A51VgCtgTt6969B.1.2501
ORF851A51VgCtgTt6666B.1.36.190.611111
ORF851A51VgCtgTt6060B.1.10.001088
ORF851A51VgCtgTt4949AY.250.000295
ORF851A51VgCtgTt4444AY.4.20.000954
ORF851A51VgCtgTt4444AY.9.20.001616
ORF851A51VgCtgTt4242AY.1010.020598
ORF851A51VgCtgTt4141B.1.6210.003629
ORF851A51VgCtgTt3838B.1.5260.000893
ORF851A51VgCtgTt3636AY.1000.001656
ORF851A51VgCtgTt3535B.1.177.420.031306
ORF851A51VgCtgTt3131AY.260.000878
ORF851A51VgCtgTt3131AY.330.00207
ORF851A51VgCtgTt3030B.1.4270.001515
ORF851A51VgCtgTt3030B.1.438.10.003218
ORF851A51VgCtgTt2727B.1.2580.001797
ORF851A51VgCtgTt2626B.1.1.3180.007846
ORF851A51VgCtgTt2626B.1.1.3290.1
ORF851A51VgCtgTt2626B.1.1.390.013252
ORF851A51VgCtgTt2626C.370.003018
ORF851A51VgCtgTt2222AY.230.001534
ORF851A51VgCtgTt2121AY.470.000653
ORF851A51VgCtgTt2121B.1.466.20.008216
ORF851A51VgCtgTt2020AY.520.016287
ORF851A51VgCtgTt1919AY.420.000764
ORF851A51VgCtgTt1919C.36.30.010777
ORF851A51VgCtgTt1717B.1.30.044503
ORF851A51VgCtgTt1616AY.460.001665
ORF851A51VgCtgTt1515B.1.177.40.003166
ORF851A51VgCtgTt1414AY.90.000946
ORF851A51VgCtgTt1414B.1.36.290.007243
ORF851A51VgCtgTt1414B.1.617.10.001806
ORF851A51VgCtgTt1313AY.1190.000459
ORF851A51VgCtgTt1313B.1.1.1130.090909
ORF851A51VgCtgTt1313B.1.2430.000905
ORF851A51VgCtgTt1212AY.4.50.00129
ORF851A51VgCtgTt1212B.1.177.820.005728
ORF851A51VgCtgTt1212B.1.2210.000852
ORF851A51VgCtgTt1111AY.360.00163
ORF851A51VgCtgTt1010B.1.1.3690.004462
ORF851A51VgCtgTt1010B.1.360.001459
ORF851A51VgCtgTt1010Q.80.001649
ORF851A51VgCtgTt99AY.450.001095
ORF851A51VgCtgTt99AY.46.60.00065
ORF851A51VgCtgTt99AY.9.10.000754
ORF851A51VgCtgTt99B.1.1.1530.009858
ORF851A51VgCtgTt99B.1.1.2160.008014
ORF851A51VgCtgTt99B.1.1.2220.001836
ORF851A51VgCtgTt99B.1.1.630.003472
ORF851A51VgCtgTt99B.1.110.30.006466
ORF851A51VgCtgTt88AY.3.10.000682
ORF851A51VgCtgTt88B.1.5250.000905
ORF851A51VgCtgTt88B.1.5960.000697
ORF851A51VgCtgTt88D.20.0006
ORF851A51VgCtgTt88P.1.10.002541
ORF851A51VgCtgTt88P.1.120.003872
ORF851A51VgCtgTt88P.1.170.001294
ORF851A51VgCtgTt77AY.140.000616
ORF851A51VgCtgTt77AY.60.000288
ORF851A51VgCtgTt77AY.980.000553
ORF851A51VgCtgTt77AY.98.10.000339
ORF851A51VgCtgTt77P.1.150.001626
ORF851A51VgCtgTt77P.1.40.006836
ORF851A51VgCtgTt66AY.1170.000507
ORF851A51VgCtgTt66AY.1200.000223
ORF851A51VgCtgTt66AY.850.002563
ORF851A51VgCtgTt66AY.970.010204
ORF851A51VgCtgTt66B.1.1.1170.058252
ORF851A51VgCtgTt66B.1.1.2140.000333
ORF851A51VgCtgTt66B.1.1.3060.00263
ORF851A51VgCtgTt66B.1.1.440.014458
ORF851A51VgCtgTt55AY.1080.005513
ORF851A51VgCtgTt55AY.120.00158
ORF851A51VgCtgTt55AY.270.000324
ORF851A51VgCtgTt55AY.750.00028
ORF851A51VgCtgTt55B.1.1.2260.02907
ORF851A51VgCtgTt55B.1.1.3120.00956
ORF851A51VgCtgTt55B.1.1.370.000964
ORF851A51VgCtgTt55B.1.177.210.000382
ORF851A51VgCtgTt44AY.1090.002959
ORF851A51VgCtgTt44AY.1100.000451
ORF851A51VgCtgTt44AY.1130.00057
ORF851A51VgCtgTt44AY.130.000644
ORF851A51VgCtgTt44AY.340.000388
ORF851A51VgCtgTt44AY.5.40.001107
ORF851A51VgCtgTt44AY.610.000419
ORF851A51VgCtgTt44AY.670.001857
ORF851A51VgCtgTt44AY.900.002738
ORF851A51VgCtgTt44B0.000511
ORF851A51VgCtgTt44B.1.1.3170.001647
ORF851A51VgCtgTt44B.1.1.4870.022346
ORF851A51VgCtgTt44B.1.177.570.001124
ORF851A51VgCtgTt44B.1.2100.008529
ORF851A51VgCtgTt44B.1.258.170.000416
ORF851A51VgCtgTt44B.1.36.180.001681
ORF851A51VgCtgTt44B.1.3620.006163
ORF851A51VgCtgTt44B.1.6190.003484
ORF851A51VgCtgTt44Q.40.001819
ORF851A51VgCtgTt44R.10.00036
ORF851A51VgCtgTt33AY.1060.001005
ORF851A51VgCtgTt33AY.1150.015625
ORF851A51VgCtgTt33AY.1180.000188
ORF851A51VgCtgTt33AY.300.001187
ORF851A51VgCtgTt33AY.590.001589
ORF851A51VgCtgTt33AY.680.000821
ORF851A51VgCtgTt33AY.740.000347
ORF851A51VgCtgTt33AY.920.000862
ORF851A51VgCtgTt33AY.950.002283
ORF851A51VgCtgTt33AY.99.20.000276
ORF851A51VgCtgTt33B.1.1.100.003344
ORF851A51VgCtgTt33B.1.1.3370.010791
ORF851A51VgCtgTt33B.1.1110.003525
ORF851A51VgCtgTt33B.1.1390.002199
ORF851A51VgCtgTt33B.1.160.100.024194
ORF851A51VgCtgTt33B.1.177.160.001993
ORF851A51VgCtgTt33B.1.177.70.000495
ORF851A51VgCtgTt33B.1.177.870.002183
ORF851A51VgCtgTt33B.1.2010.017045
ORF851A51VgCtgTt33B.1.36.160.004274
ORF851A51VgCtgTt33B.1.4160.003807
ORF851A51VgCtgTt33P.1.140.000143
ORF851A51VgCtgTt33P.1.17.10.002625
ORF851A51VgCtgTt33P.1.80.014354
ORF851A51VgCtgTt22AD.20.000438
ORF851A51VgCtgTt22AY.1110.000366
ORF851A51VgCtgTt22AY.1140.000462
ORF851A51VgCtgTt22AY.1160.000574
ORF851A51VgCtgTt22AY.1210.000271
ORF851A51VgCtgTt22AY.160.000759
ORF851A51VgCtgTt22AY.190.002281
ORF851A51VgCtgTt22AY.34.10.00102
ORF851A51VgCtgTt22AY.39.10.000079
ORF851A51VgCtgTt22AY.410.000588
ORF851A51VgCtgTt22AY.5.30.000675
ORF851A51VgCtgTt22AY.550.001835
ORF851A51VgCtgTt22AY.650.001066
ORF851A51VgCtgTt22AY.75.10.000361
ORF851A51VgCtgTt22B.1.1.2630.003115
ORF851A51VgCtgTt22B.1.1.280.000622
ORF851A51VgCtgTt22B.1.1.2860.005797
ORF851A51VgCtgTt22B.1.1.330.000842
ORF851A51VgCtgTt22B.1.1.3980.006452
ORF851A51VgCtgTt22B.1.1.4090.005666
ORF851A51VgCtgTt22B.1.1.4640.002946
ORF851A51VgCtgTt22B.1.177.440.001038
ORF851A51VgCtgTt22B.1.2060.001631
ORF851A51VgCtgTt22B.1.221.10.005814
ORF851A51VgCtgTt22B.1.2350.005038
ORF851A51VgCtgTt22B.1.2370.00995
ORF851A51VgCtgTt22B.1.258.30.00335
ORF851A51VgCtgTt22B.1.3110.000549
ORF851A51VgCtgTt22B.1.36.80.002
ORF851A51VgCtgTt22B.1.390.007812
ORF851A51VgCtgTt22B.1.4700.002809
ORF851A51VgCtgTt22B.1.4990.002101
ORF851A51VgCtgTt22B.1.5640.000852
ORF851A51VgCtgTt22B.1.5650.001621
ORF851A51VgCtgTt22B.1.5760.001813
ORF851A51VgCtgTt22B.1.6060.012048
ORF851A51VgCtgTt22B.1.617.30.00597
ORF851A51VgCtgTt22B.1.930.001867
ORF851A51VgCtgTt22B.30.001661
ORF851A51VgCtgTt22C.160.002121
ORF851A51VgCtgTt22C.2.10.013333
ORF851A51VgCtgTt22C.360.001821
ORF851A51VgCtgTt22L.30.007092
ORF851A51VgCtgTt22P.60.006289
ORF851A51VgCtgTt11A.190.009434
ORF851A51VgCtgTt11AP.10.001502
ORF851A51VgCtgTt11AT.10.005128
ORF851A51VgCtgTt11AY.10.000396
ORF851A51VgCtgTt11AY.1040.001984
ORF851A51VgCtgTt11AY.1070.000466
ORF851A51VgCtgTt11AY.16.10.00047
ORF851A51VgCtgTt11AY.170.008197
ORF851A51VgCtgTt11AY.20.000356
ORF851A51VgCtgTt11AY.23.10.000417
ORF851A51VgCtgTt11AY.240.000431
ORF851A51VgCtgTt11AY.320.000532
ORF851A51VgCtgTt11AY.350.000233
ORF851A51VgCtgTt11AY.370.000316
ORF851A51VgCtgTt11AY.380.000499
ORF851A51VgCtgTt11AY.4.30.000842
ORF851A51VgCtgTt11AY.4.40.000409
ORF851A51VgCtgTt11AY.400.000964
ORF851A51VgCtgTt11AY.46.10.001027
ORF851A51VgCtgTt11AY.46.20.000635
ORF851A51VgCtgTt11AY.46.30.000934
ORF851A51VgCtgTt11AY.46.50.000198
ORF851A51VgCtgTt11AY.480.000465
ORF851A51VgCtgTt11AY.620.000436
ORF851A51VgCtgTt11AY.630.000387
ORF851A51VgCtgTt11AY.7.10.000113
ORF851A51VgCtgTt11AY.760.004831
ORF851A51VgCtgTt11AY.790.001211
ORF851A51VgCtgTt11AY.840.000437
ORF851A51VgCtgTt11AY.870.000833
ORF851A51VgCtgTt11AY.910.00073
ORF851A51VgCtgTt11AY.990.001049
ORF851A51VgCtgTt11B.1.1.10.000327
ORF851A51VgCtgTt11B.1.1.1290.009174
ORF851A51VgCtgTt11B.1.1.1380.006061
ORF851A51VgCtgTt11B.1.1.1610.003534
ORF851A51VgCtgTt11B.1.1.1700.001247
ORF851A51VgCtgTt11B.1.1.1760.000439
ORF851A51VgCtgTt11B.1.1.2320.001815
ORF851A51VgCtgTt11B.1.1.2430.004082
ORF851A51VgCtgTt11B.1.1.2440.015385
ORF851A51VgCtgTt11B.1.1.2910.000742
ORF851A51VgCtgTt11B.1.1.3040.002809
ORF851A51VgCtgTt11B.1.1.3050.003861
ORF851A51VgCtgTt11B.1.1.3260.001761
ORF851A51VgCtgTt11B.1.1.3360.016667
ORF851A51VgCtgTt11B.1.1.3480.000796
ORF851A51VgCtgTt11B.1.1.3510.002793
ORF851A51VgCtgTt11B.1.1.3970.002252
ORF851A51VgCtgTt11B.1.1.4040.015873
ORF851A51VgCtgTt11B.1.1.4320.001266
ORF851A51VgCtgTt11B.1.1.460.004367
ORF851A51VgCtgTt11B.1.1.470.005348
ORF851A51VgCtgTt11B.1.1.4860.001577
ORF851A51VgCtgTt11B.1.1.500.000679
ORF851A51VgCtgTt11B.1.1.5150.02
ORF851A51VgCtgTt11B.1.1.950.019608
ORF851A51VgCtgTt11B.1.1470.000756
ORF851A51VgCtgTt11B.1.1570.002985
ORF851A51VgCtgTt11B.1.160.310.008065
ORF851A51VgCtgTt11B.1.160.80.001289
ORF851A51VgCtgTt11B.1.177.100.000878
ORF851A51VgCtgTt11B.1.177.120.000152
ORF851A51VgCtgTt11B.1.177.460.000918
ORF851A51VgCtgTt11B.1.177.510.004566
ORF851A51VgCtgTt11B.1.177.540.000606
ORF851A51VgCtgTt11B.1.177.720.00339
ORF851A51VgCtgTt11B.1.177.730.000566
ORF851A51VgCtgTt11B.1.177.80.000752
ORF851A51VgCtgTt11B.1.177.800.001912
ORF851A51VgCtgTt11B.1.2390.001221
ORF851A51VgCtgTt11B.1.2400.000216
ORF851A51VgCtgTt11B.1.258.140.00098
ORF851A51VgCtgTt11B.1.2600.003344
ORF851A51VgCtgTt11B.1.2670.018519
ORF851A51VgCtgTt11B.1.2980.002114
ORF851A51VgCtgTt11B.1.351.20.000303
ORF851A51VgCtgTt11B.1.36.170.000494
ORF851A51VgCtgTt11B.1.36.270.000763
ORF851A51VgCtgTt11B.1.3690.000285
ORF851A51VgCtgTt11B.1.3750.00082
ORF851A51VgCtgTt11B.1.3960.000706
ORF851A51VgCtgTt11B.1.3990.001934
ORF851A51VgCtgTt11B.1.4000.000429
ORF851A51VgCtgTt11B.1.4030.003268
ORF851A51VgCtgTt11B.1.415.10.007576
ORF851A51VgCtgTt11B.1.4420.035714
ORF851A51VgCtgTt11B.1.4480.002625
ORF851A51VgCtgTt11B.1.4560.003268
ORF851A51VgCtgTt11B.1.4620.007246
ORF851A51VgCtgTt11B.1.5050.004386
ORF851A51VgCtgTt11B.1.517.10.005263
ORF851A51VgCtgTt11B.1.5200.021739
ORF851A51VgCtgTt11B.1.5610.000397
ORF851A51VgCtgTt11B.1.5820.000491
ORF851A51VgCtgTt11B.1.5950.000261
ORF851A51VgCtgTt11B.1.5970.00463
ORF851A51VgCtgTt11B.1.840.020833
ORF851A51VgCtgTt11B.1.9.40.006135
ORF851A51VgCtgTt11B.1.9.50.005682
ORF851A51VgCtgTt11C.180.002591
ORF851A51VgCtgTt11C.230.005814
ORF851A51VgCtgTt11C.380.008065
ORF851A51VgCtgTt11M.10.023256
ORF851A51VgCtgTt11P.1.130.000898
ORF851A51VgCtgTt11Q.30.000145
ORF851A51VgCtgTt11W.20.004831

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.