CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : Mut = A51D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF851A51DnonsyngCtgAt143143128044-28046

Details of the mutation A51D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF851A51DgCtgAt143143All0.000027
ORF851A51DgCtgAt4040AY.70.00784
ORF851A51DgCtgAt1616AY.440.000097
ORF851A51DgCtgAt1313B.1.1.70.000012
ORF851A51DgCtgAt77AY.40.000011
ORF851A51DgCtgAt66B.1.617.20.000023
ORF851A51DgCtgAt55B.1.177.420.004472
ORF851A51DgCtgAt44AY.29.10.000882
ORF851A51DgCtgAt44B.1.1.2280.012195
ORF851A51DgCtgAt44B.1.177.350.002764
ORF851A51DgCtgAt44B.1.20.000035
ORF851A51DgCtgAt44P.10.000063
ORF851A51DgCtgAt33B.10.000027
ORF851A51DgCtgAt33B.1.130.007126
ORF851A51DgCtgAt33B.1.177.460.002755
ORF851A51DgCtgAt22AY.200.000078
ORF851A51DgCtgAt22AY.250.000012
ORF851A51DgCtgAt22AY.430.000009
ORF851A51DgCtgAt22AY.60.000082
ORF851A51DgCtgAt22P.1.170.000324
ORF851A51DgCtgAt11AY.1030.000006
ORF851A51DgCtgAt11AY.1170.000085
ORF851A51DgCtgAt11AY.390.000025
ORF851A51DgCtgAt11AY.4.20.000022
ORF851A51DgCtgAt11AY.410.000294
ORF851A51DgCtgAt11AY.420.00004
ORF851A51DgCtgAt11AY.590.00053
ORF851A51DgCtgAt11AY.90.000068
ORF851A51DgCtgAt11AY.9.20.000037
ORF851A51DgCtgAt11B.1.10.000018
ORF851A51DgCtgAt11B.1.1.1410.002012
ORF851A51DgCtgAt11B.1.1.390.00051
ORF851A51DgCtgAt11B.1.2210.000071
ORF851A51DgCtgAt11B.1.2400.000216
ORF851A51DgCtgAt11B.1.4290.000024
ORF851A51DgCtgAt11B.1.5610.000397
ORF851A51DgCtgAt11B.1.6200.000946

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.