CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 8

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF8	8	G8V		nonsyn	gGa	gTa	3989	3988	0.999749	27915-27917
ORF8	8	G8V		nonsyn	gGA	gTT	3989	1	0.000250689	27915-27917
ORF8	8	G8R		nonsyn	Gga	Aga	3950	3860	0.977215	27915-27917
ORF8	8	G8R		nonsyn	Gga	Cga	3950	85	0.021519	27915-27917
ORF8	8	G8R		nonsyn	GgA	AgG	3950	4	0.00101266	27915-27917
ORF8	8	G8R		nonsyn	GgA	CgT	3950	1	0.000253165	27915-27917
ORF8	8	G8X		nonsyn	Gga	Tga	1525	1522	0.998033	27915-27917
ORF8	8	G8X		nonsyn	GGa	TAa	1525	3	0.00196721	27915-27917
ORF8	8	G8E		nonsyn	gGa	gAa	1031	1031	1	27915-27917
ORF8	8	G8G		syn	ggA	ggG	896	820	0.915179	27915-27917
ORF8	8	G8G		syn	ggA	ggT	896	67	0.0747768	27915-27917
ORF8	8	G8G		syn	ggA	ggC	896	9	0.0100446	27915-27917
ORF8	8	G8del		del	GGA	---	523	523	1	27915-27917
ORF8	8	G8A		nonsyn	gGa	gCa	37	37	1	27915-27917
ORF8	8	G8del2		del	GGa	--a	15	8	0.533333	27915-27917
ORF8	8	G8del2		del	gGA	g--	15	6	0.4	27915-27917
ORF8	8	G8del2		del	GGA	A--	15	1	0.0666667	27915-27917
ORF8	8	G8L		nonsyn	GGa	TTa	9	6	0.666667	27915-27917
ORF8	8	G8del1		del	Gga	-ga	9	4	0.444444	27915-27917
ORF8	8	G8del1		del	ggA	gg-	9	3	0.333333	27915-27917
ORF8	8	G8del1		del	GGa	-Na	9	1	0.111111	27915-27917
ORF8	8	G8L		nonsyn	GGA	CTT	9	1	0.111111	27915-27917
ORF8	8	G8L		nonsyn	GGa	CTa	9	1	0.111111	27915-27917
ORF8	8	G8del1		del	GGA	-NN	9	1	0.111111	27915-27917
ORF8	8	G8L		nonsyn	GGA	TTG	9	1	0.111111	27915-27917
ORF8	8	G8D		nonsyn	gGA	gAT	8	8	1	27915-27917
ORF8	8	G8F		nonsyn	GGA	TTT	6	4	0.666667	27915-27917
ORF8	8	G8I		nonsyn	GGa	ATa	6	4	0.666667	27915-27917
ORF8	8	G8F		nonsyn	GGA	TTC	6	2	0.333333	27915-27917
ORF8	8	G8I		nonsyn	GGA	ATC	6	2	0.333333	27915-27917
ORF8	8	G8S		nonsyn	GgA	AgT	4	2	0.5	27915-27917
ORF8	8	G8S		nonsyn	GgA	AgC	4	2	0.5	27915-27917
ORF8	8	G8N		nonsyn	GGA	AAC	3	3	1	27915-27917
ORF8	8	G8Y		nonsyn	GGA	TAC	3	3	1	27915-27917
ORF8	8	G8T		nonsyn	GGA	ACG	3	2	0.666667	27915-27917
ORF8	8	G8T		nonsyn	GGa	ACa	3	1	0.333333	27915-27917
ORF8	8	G8K		nonsyn	GGa	AAa	2	2	1	27915-27917
ORF8	8	G8C		nonsyn	GgA	TgT	2	1	0.5	27915-27917
ORF8	8	G8C		nonsyn	GgA	TgC	2	1	0.5	27915-27917
ORF8	8	G8W		nonsyn	GgA	TgG	1	1	1	27915-27917

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF8	8	G8V	gGa	gTa	3988	3989	All	0.000763
ORF8	8	G8V	gGA	gTT	1	3989	All	0
ORF8	8	G8R	Gga	Aga	3860	3950	All	0.000738
ORF8	8	G8R	Gga	Cga	85	3950	All	0.000016
ORF8	8	G8R	GgA	AgG	4	3950	All	0.000001
ORF8	8	G8R	GgA	CgT	1	3950	All	0
ORF8	8	G8X	Gga	Tga	1522	1525	All	0.000291
ORF8	8	G8X	GGa	TAa	3	1525	All	0.000001
ORF8	8	G8R	Gga	Aga	1346	1346	B.1.110.3	0.966954
ORF8	8	G8E	gGa	gAa	1031	1031	All	0.000197
ORF8	8	G8G	ggA	ggG	820	896	All	0.000157
ORF8	8	G8G	ggA	ggT	67	896	All	0.000013
ORF8	8	G8G	ggA	ggC	9	896	All	0.000002
ORF8	8	G8V	gGa	gTa	869	869	B.1.568	0.965556
ORF8	8	G8V	gGa	gTa	779	779	B.1.617.2	0.002933
ORF8	8	G8G	ggA	ggG	581	589	AY.4	0.000904
ORF8	8	G8G	ggA	ggT	8	589	AY.4	0.000012
ORF8	8	G8R	Gga	Aga	497	565	B.1.1.7	0.000445
ORF8	8	G8R	Gga	Cga	68	565	B.1.1.7	0.000061
ORF8	8	G8del	GGA	---	523	523	All	0.0001
ORF8	8	G8V	gGa	gTa	485	485	AY.3	0.004824
ORF8	8	G8R	Gga	Aga	476	477	AY.4	0.000741
ORF8	8	G8R	Gga	Cga	1	477	AY.4	0.000002
ORF8	8	G8E	gGa	gAa	286	286	B.1.617.2	0.001077
ORF8	8	G8R	Gga	Aga	242	244	B.1.617.2	0.000911
ORF8	8	G8R	Gga	Cga	2	244	B.1.617.2	0.000008
ORF8	8	G8V	gGa	gTa	242	242	AY.4	0.000377
ORF8	8	G8E	gGa	gAa	214	214	B.1.1.7	0.000192
ORF8	8	G8X	Gga	Tga	204	204	P.1.8	0.976077
ORF8	8	G8X	Gga	Tga	189	189	P.1	0.002978
ORF8	8	G8X	Gga	Tga	178	178	B.1.596	0.015511
ORF8	8	G8V	gGa	gTa	172	172	B.1.1.7	0.000154
ORF8	8	G8X	Gga	Tga	159	159	B.1.1.7	0.000142
ORF8	8	G8R	Gga	Aga	140	140	AY.75	0.007843
ORF8	8	G8V	gGa	gTa	122	123	B.1.177	0.001606
ORF8	8	G8V	gGA	gTT	1	123	B.1.177	0.000013
ORF8	8	G8R	Gga	Aga	115	115	AY.29	0.001814
ORF8	8	G8R	Gga	Aga	107	107	B.1.1.519	0.004249
ORF8	8	G8V	gGa	gTa	105	105	B.1.1.222	0.02142
ORF8	8	G8X	Gga	Tga	99	99	AY.4	0.000154
ORF8	8	G8X	Gga	Tga	94	94	B.4.7	0.949495
ORF8	8	G8R	Gga	Aga	92	92	B.1.1.214	0.005102
ORF8	8	G8V	gGa	gTa	88	88	AY.103	0.000546
ORF8	8	G8del	GGA	---	83	83	B.1.1.7	0.000074
ORF8	8	G8V	gGa	gTa	75	75	B.1.177.60	0.016383
ORF8	8	G8E	gGa	gAa	71	71	AY.102	0.001882
ORF8	8	G8del	GGA	---	64	64	AY.4	0.0001
ORF8	8	G8V	gGa	gTa	61	61	AY.44	0.000371
ORF8	8	G8V	gGa	gTa	59	59	AY.43	0.000261
ORF8	8	G8G	ggA	ggG	55	58	AY.25	0.000331
ORF8	8	G8G	ggA	ggT	3	58	AY.25	0.000018
ORF8	8	G8X	Gga	Tga	58	58	AY.43	0.000257
ORF8	8	G8R	Gga	Aga	57	57	B.1	0.000522
ORF8	8	G8V	gGa	gTa	56	56	AY.102	0.001485
ORF8	8	G8V	gGa	gTa	52	52	AY.120.1	0.016693
ORF8	8	G8V	gGa	gTa	51	51	AY.92	0.014651
ORF8	8	G8X	Gga	Tga	49	49	AY.3	0.000487
ORF8	8	G8R	Gga	Aga	46	46	B.1.2	0.000405
ORF8	8	G8X	Gga	Tga	46	46	B.1.617.2	0.000173
ORF8	8	G8V	gGa	gTa	43	43	B.1	0.000394
ORF8	8	G8E	gGa	gAa	41	41	AY.121	0.005548
ORF8	8	G8X	Gga	Tga	40	40	AY.25	0.000241
ORF8	8	G8del	GGA	---	39	39	AY.29	0.000615
ORF8	8	G8E	gGa	gAa	39	39	AY.4	0.000061
ORF8	8	G8G	ggA	ggG	37	39	AY.43	0.000164
ORF8	8	G8R	Gga	Aga	34	39	AY.43	0.000151
ORF8	8	G8R	Gga	Cga	4	39	AY.43	0.000018
ORF8	8	G8G	ggA	ggT	2	39	AY.43	0.000009
ORF8	8	G8R	GgA	CgT	1	39	AY.43	0.000004
ORF8	8	G8V	gGa	gTa	38	38	AY.98.1	0.00184
ORF8	8	G8R	Gga	Aga	38	38	B.1.221	0.002699
ORF8	8	G8A	gGa	gCa	37	37	All	0.000007
ORF8	8	G8R	Gga	Aga	37	37	AY.103	0.00023
ORF8	8	G8del	GGA	---	35	35	B.1.1.222	0.00714
ORF8	8	G8del	GGA	---	35	35	B.1.243	0.002435
ORF8	8	G8R	Gga	Aga	32	32	AY.102	0.000848
ORF8	8	G8R	Gga	Aga	32	32	AY.105	0.020579
ORF8	8	G8R	Gga	Aga	32	32	B.1.258	0.00213
ORF8	8	G8R	Gga	Aga	31	31	B.1.1.294	0.039241
ORF8	8	G8G	ggA	ggG	30	31	B.1.617.2	0.000113
ORF8	8	G8G	ggA	ggT	1	31	B.1.617.2	0.000004
ORF8	8	G8X	Gga	Tga	30	30	B.1	0.000275
ORF8	8	G8R	Gga	Aga	29	29	AY.25	0.000174
ORF8	8	G8E	gGa	gAa	29	29	AY.39	0.000717
ORF8	8	G8E	gGa	gAa	29	29	AY.44	0.000177
ORF8	8	G8V	gGa	gTa	29	29	B.1.369	0.008272
ORF8	8	G8X	Gga	Tga	28	28	AY.44	0.00017
ORF8	8	G8V	gGa	gTa	28	28	AY.46.2	0.017789
ORF8	8	G8E	gGa	gAa	26	26	AY.4.2	0.000564
ORF8	8	G8V	gGa	gTa	24	24	AY.119	0.000847
ORF8	8	G8X	Gga	Tga	24	24	B.1.160	0.000749
ORF8	8	G8G	ggA	ggG	23	24	B.1.561	0.009131
ORF8	8	G8G	ggA	ggT	1	24	B.1.561	0.000397
ORF8	8	G8R	Gga	Aga	18	23	AY.27	0.001165
ORF8	8	G8R	Gga	Cga	5	23	AY.27	0.000324
ORF8	8	G8R	Gga	Aga	23	23	AY.4.2	0.000499
ORF8	8	G8V	gGa	gTa	22	22	AY.4.2	0.000477
ORF8	8	G8G	ggA	ggT	19	22	AY.44	0.000116
ORF8	8	G8G	ggA	ggG	3	22	AY.44	0.000018
ORF8	8	G8V	gGa	gTa	21	21	AY.25	0.000126
ORF8	8	G8V	gGa	gTa	21	21	AY.26	0.000595
ORF8	8	G8del	GGA	---	21	21	B.1.1	0.000381
ORF8	8	G8E	gGa	gAa	20	20	B.1.429	0.000471
ORF8	8	G8X	Gga	Tga	19	19	AY.5.3	0.00641
ORF8	8	G8del	GGA	---	19	19	B.1	0.000174
ORF8	8	G8X	Gga	Tga	19	19	B.1.1	0.000345
ORF8	8	G8R	Gga	Aga	19	19	B.1.1.170	0.023691
ORF8	8	G8V	gGa	gTa	18	18	AY.16.1	0.008459
ORF8	8	G8R	Gga	Aga	18	18	AY.26	0.00051
ORF8	8	G8E	gGa	gAa	18	18	AY.43	0.00008
ORF8	8	G8V	gGa	gTa	18	18	AY.98	0.001422
ORF8	8	G8del	GGA	---	18	18	B	0.002301
ORF8	8	G8G	ggA	ggG	17	17	AY.106	0.005693
ORF8	8	G8R	Gga	Aga	17	17	AY.44	0.000103
ORF8	8	G8A	gGa	gCa	16	16	AY.25	0.000096
ORF8	8	G8V	gGa	gTa	16	16	B.1.1.28	0.00498
ORF8	8	G8X	Gga	Tga	16	16	B.1.2	0.000141
ORF8	8	G8R	Gga	Aga	16	16	B.1.526	0.000376
ORF8	8	G8del2	GGa	--a	8	15	All	0.000002
ORF8	8	G8del2	gGA	g--	6	15	All	0.000001
ORF8	8	G8del2	GGA	A--	1	15	All	0
ORF8	8	G8X	Gga	Tga	15	15	AY.103	0.000093
ORF8	8	G8R	Gga	Aga	15	15	B.1.1	0.000272
ORF8	8	G8V	gGa	gTa	15	15	B.1.2	0.000132
ORF8	8	G8G	ggA	ggG	13	14	AY.103	0.000081
ORF8	8	G8G	ggA	ggT	1	14	AY.103	0.000006
ORF8	8	G8R	Gga	Aga	14	14	AY.119	0.000494
ORF8	8	G8V	gGa	gTa	14	14	AY.40	0.0135
ORF8	8	G8V	gGa	gTa	14	14	AY.46.6	0.001011
ORF8	8	G8V	gGa	gTa	14	14	B.1.1.368	0.04321
ORF8	8	G8X	Gga	Tga	14	14	B.1.221	0.000994
ORF8	8	G8V	gGa	gTa	13	13	AY.29	0.000205
ORF8	8	G8del	GGA	---	13	13	AY.48	0.006047
ORF8	8	G8V	gGa	gTa	13	13	AY.5.4	0.003597
ORF8	8	G8R	Gga	Aga	12	12	AY.118	0.000752
ORF8	8	G8V	gGa	gTa	12	12	AY.20	0.000466
ORF8	8	G8V	gGa	gTa	12	12	AY.39	0.000297
ORF8	8	G8R	Gga	Aga	12	12	AY.5	0.000248
ORF8	8	G8R	Gga	Aga	12	12	B.1.1.263	0.018692
ORF8	8	G8E	gGa	gAa	12	12	B.1.1.46	0.052402
ORF8	8	G8V	gGa	gTa	12	12	B.1.400	0.005148
ORF8	8	G8E	gGa	gAa	11	11	AY.116	0.003155
ORF8	8	G8G	ggA	ggT	10	11	AY.3	0.000099
ORF8	8	G8G	ggA	ggG	1	11	AY.3	0.00001
ORF8	8	G8X	Gga	Tga	11	11	AY.9.2	0.000404
ORF8	8	G8V	gGa	gTa	11	11	B.1.160	0.000343
ORF8	8	G8V	gGa	gTa	10	10	AY.107	0.00466
ORF8	8	G8R	Gga	Aga	10	10	AY.5.3	0.003374
ORF8	8	G8V	gGa	gTa	10	10	AY.61	0.001048
ORF8	8	G8V	gGa	gTa	10	10	AY.68	0.002737
ORF8	8	G8V	gGa	gTa	10	10	B.1.1	0.000181
ORF8	8	G8R	Gga	Aga	10	10	B.1.1.174	0.033784
ORF8	8	G8G	ggA	ggG	5	10	B.1.1.7	0.000004
ORF8	8	G8G	ggA	ggT	4	10	B.1.1.7	0.000004
ORF8	8	G8G	ggA	ggC	1	10	B.1.1.7	0.000001
ORF8	8	G8del	GGA	---	10	10	B.1.2	0.000088
ORF8	8	G8E	gGa	gAa	10	10	B.1.466.2	0.003912
ORF8	8	G8R	Gga	Aga	10	10	B.1.596	0.000871
ORF8	8	G8R	Gga	Aga	10	10	Q.3	0.00145
ORF8	8	G8L	GGa	TTa	6	9	All	0.000001
ORF8	8	G8del1	Gga	-ga	4	9	All	0.000001
ORF8	8	G8del1	ggA	gg-	3	9	All	0.000001
ORF8	8	G8del1	GGa	-Na	1	9	All	0
ORF8	8	G8L	GGA	CTT	1	9	All	0
ORF8	8	G8L	GGa	CTa	1	9	All	0
ORF8	8	G8L	GGA	TTG	1	9	All	0
ORF8	8	G8del1	GGA	-NN	1	9	All	0
ORF8	8	G8V	gGa	gTa	9	9	AY.118	0.000564
ORF8	8	G8R	Gga	Aga	9	9	AY.33	0.000601
ORF8	8	G8R	Gga	Aga	9	9	AY.39	0.000222
ORF8	8	G8X	Gga	Tga	9	9	AY.39	0.000222
ORF8	8	G8del	GGA	---	9	9	B.1.160	0.000281
ORF8	8	G8E	gGa	gAa	9	9	B.1.160	0.000281
ORF8	8	G8R	Gga	Aga	9	9	B.1.509	0.007792
ORF8	8	G8R	Gga	Aga	9	9	B.1.525	0.001018
ORF8	8	G8R	Gga	Aga	9	9	Q.8	0.001484
ORF8	8	G8D	gGA	gAT	8	8	All	0.000002
ORF8	8	G8E	gGa	gAa	8	8	AY.100	0.000368
ORF8	8	G8E	gGa	gAa	8	8	AY.103	0.00005
ORF8	8	G8R	Gga	Aga	8	8	AY.120	0.000297
ORF8	8	G8X	Gga	Tga	8	8	AY.20	0.000311
ORF8	8	G8V	gGa	gTa	8	8	AY.33	0.000534
ORF8	8	G8A	gGa	gCa	8	8	AY.4	0.000012
ORF8	8	G8V	gGa	gTa	8	8	AY.5	0.000165
ORF8	8	G8E	gGa	gAa	8	8	B.1	0.000073
ORF8	8	G8X	Gga	Tga	8	8	B.1.1.193	0.888889
ORF8	8	G8del	GGA	---	8	8	B.1.177	0.000105
ORF8	8	G8E	gGa	gAa	8	8	B.1.2	0.00007
ORF8	8	G8X	Gga	Tga	8	8	B.1.240	0.001725
ORF8	8	G8V	gGa	gTa	8	8	B.1.258	0.000532
ORF8	8	G8X	Gga	Tga	8	8	B.1.466.2	0.00313
ORF8	8	G8E	gGa	gAa	8	8	B.1.621	0.000708
ORF8	8	G8E	gGa	gAa	8	8	P.1	0.000126
ORF8	8	G8E	gGa	gAa	8	8	P.1.14	0.000382
ORF8	8	G8X	Gga	Tga	7	7	AY.16	0.002658
ORF8	8	G8E	gGa	gAa	7	7	AY.3	0.00007
ORF8	8	G8R	Gga	Aga	5	7	B	0.000639
ORF8	8	G8R	Gga	Cga	2	7	B	0.000256
ORF8	8	G8del	GGA	---	7	7	B.1.1.265	0.022082
ORF8	8	G8V	gGa	gTa	7	7	B.1.1.519	0.000278
ORF8	8	G8X	Gga	Tga	7	7	B.1.177	0.000092
ORF8	8	G8V	gGa	gTa	7	7	B.1.241	0.005682
ORF8	8	G8del	GGA	---	7	7	B.1.36.16	0.009972
ORF8	8	G8del	GGA	---	7	7	B.1.617.2	0.000026
ORF8	8	G8del	GGA	---	7	7	P.1	0.00011
ORF8	8	G8R	GgA	AgG	4	6		0.222222
ORF8	8	G8R	Gga	Aga	2	6		0.111111
ORF8	8	G8I	GGa	ATa	4	6	All	0.000001
ORF8	8	G8F	GGA	TTT	4	6	All	0.000001
ORF8	8	G8I	GGA	ATC	2	6	All	0
ORF8	8	G8F	GGA	TTC	2	6	All	0
ORF8	8	G8V	gGa	gTa	6	6	AY.111	0.001099
ORF8	8	G8E	gGa	gAa	6	6	AY.118	0.000376
ORF8	8	G8del	GGA	---	6	6	AY.29.1	0.001323
ORF8	8	G8del	GGA	---	6	6	AY.3	0.00006
ORF8	8	G8R	Gga	Aga	6	6	AY.3	0.00006
ORF8	8	G8del	GGA	---	6	6	AY.3.1	0.000512
ORF8	8	G8V	gGa	gTa	6	6	AY.31	0.111111
ORF8	8	G8V	gGa	gTa	6	6	AY.4.4	0.002455
ORF8	8	G8V	gGa	gTa	6	6	AY.42	0.000241
ORF8	8	G8del	GGA	---	6	6	AY.44	0.000037
ORF8	8	G8R	Gga	Aga	6	6	AY.45	0.00073
ORF8	8	G8R	Gga	Aga	6	6	AY.47	0.000187
ORF8	8	G8E	gGa	gAa	6	6	AY.5	0.000124
ORF8	8	G8R	Gga	Aga	6	6	AY.9.2	0.00022
ORF8	8	G8G	ggA	ggG	4	6	B.1	0.000037
ORF8	8	G8G	ggA	ggT	1	6	B.1	0.000009
ORF8	8	G8G	ggA	ggC	1	6	B.1	0.000009
ORF8	8	G8V	gGa	gTa	6	6	B.1.1.214	0.000333
ORF8	8	G8del2	GGa	--a	6	6	B.1.2	0.000053
ORF8	8	G8G	ggA	ggG	6	6	B.1.2	0.000053
ORF8	8	G8del	GGA	---	6	6	B.1.243.2	0.086957
ORF8	8	G8R	Gga	Aga	6	6	B.1.391	0.006764
ORF8	8	G8V	gGa	gTa	6	6	B.1.582	0.002944
ORF8	8	G8V	gGa	gTa	6	6	B.1.612	0.015915
ORF8	8	G8V	gGa	gTa	6	6	B.1.617.1	0.000774
ORF8	8	G8R	Gga	Aga	6	6	P.1	0.000095
ORF8	8	G8R	Gga	Aga	5	5	AY.107	0.00233
ORF8	8	G8X	Gga	Tga	5	5	AY.14	0.00044
ORF8	8	G8R	Gga	Aga	5	5	AY.20	0.000194
ORF8	8	G8V	gGa	gTa	5	5	AY.23	0.000349
ORF8	8	G8V	gGa	gTa	5	5	AY.28	0.009452
ORF8	8	G8V	gGa	gTa	5	5	AY.29.1	0.001103
ORF8	8	G8V	gGa	gTa	5	5	AY.3.1	0.000426
ORF8	8	G8X	Gga	Tga	5	5	AY.33	0.000334
ORF8	8	G8G	ggA	ggG	5	5	AY.33	0.000334
ORF8	8	G8X	Gga	Tga	5	5	AY.42	0.000201
ORF8	8	G8del	GGA	---	5	5	AY.43	0.000022
ORF8	8	G8V	gGa	gTa	5	5	AY.53	0.001438
ORF8	8	G8V	gGa	gTa	5	5	AY.54	0.000477
ORF8	8	G8X	Gga	Tga	5	5	AY.61	0.000524
ORF8	8	G8X	Gga	Tga	5	5	AY.99.2	0.000461
ORF8	8	G8V	gGa	gTa	5	5	B.1.1.153	0.005476
ORF8	8	G8R	Gga	Aga	5	5	B.1.1.222	0.00102
ORF8	8	G8V	gGa	gTa	5	5	B.1.1.306	0.002192
ORF8	8	G8X	Gga	Tga	5	5	B.1.258	0.000333
ORF8	8	G8V	gGa	gTa	5	5	B.1.36	0.00073
ORF8	8	G8del	GGA	---	5	5	B.1.526	0.000118
ORF8	8	G8R	Gga	Aga	5	5	C.16	0.005302
ORF8	8	G8V	gGa	gTa	5	5	P.1	0.000079
ORF8	8	G8del	GGA	---	5	5	P.1.1	0.001588
ORF8	8	G8I	GGA	ATC	2	4		0.111111
ORF8	8	G8I	GGa	ATa	2	4		0.111111
ORF8	8	G8E	gGa	gAa	4	4	A	0.001548
ORF8	8	G8S	GgA	AgT	2	4	All	0
ORF8	8	G8S	GgA	AgC	2	4	All	0
ORF8	8	G8V	gGa	gTa	4	4	AY.116	0.001147
ORF8	8	G8V	gGa	gTa	4	4	AY.117	0.000338
ORF8	8	G8X	Gga	Tga	4	4	AY.120	0.000149
ORF8	8	G8V	gGa	gTa	4	4	AY.16	0.001519
ORF8	8	G8E	gGa	gAa	4	4	AY.25	0.000024
ORF8	8	G8E	gGa	gAa	4	4	AY.29	0.000063
ORF8	8	G8V	gGa	gTa	4	4	AY.36	0.000593
ORF8	8	G8G	ggA	ggG	4	4	AY.39	0.000099
ORF8	8	G8R	Gga	Aga	4	4	AY.39.1	0.000158
ORF8	8	G8del2	gGA	g--	4	4	AY.4	0.000006
ORF8	8	G8V	gGa	gTa	4	4	AY.45	0.000487
ORF8	8	G8X	Gga	Tga	4	4	AY.5	0.000083
ORF8	8	G8V	gGa	gTa	4	4	AY.6	0.000165
ORF8	8	G8X	Gga	Tga	4	4	AY.75	0.000224
ORF8	8	G8E	gGa	gAa	4	4	AY.75	0.000224
ORF8	8	G8V	gGa	gTa	4	4	AY.75	0.000224
ORF8	8	G8E	gGa	gAa	4	4	AY.79	0.004843
ORF8	8	G8G	ggA	ggC	4	4	AY.84	0.00175
ORF8	8	G8X	Gga	Tga	4	4	AY.85	0.001709
ORF8	8	G8V	gGa	gTa	4	4	AY.9.2	0.000147
ORF8	8	G8G	ggA	ggG	4	4	B.1.1.28	0.001245
ORF8	8	G8X	Gga	Tga	4	4	B.1.1.318	0.001207
ORF8	8	G8R	Gga	Aga	4	4	B.1.1.322	0.035088
ORF8	8	G8X	Gga	Tga	4	4	B.1.1.419	0.02963
ORF8	8	G8E	gGa	gAa	4	4	B.1.1.50	0.002716
ORF8	8	G8del	GGA	---	4	4	B.1.1.519	0.000159
ORF8	8	G8R	Gga	Aga	4	4	B.1.177	0.000053
ORF8	8	G8E	gGa	gAa	4	4	B.1.177	0.000053
ORF8	8	G8R	Gga	Aga	4	4	B.1.177.86	0.000734
ORF8	8	G8A	gGa	gCa	4	4	B.1.2	0.000035
ORF8	8	G8V	gGa	gTa	4	4	B.1.243	0.000278
ORF8	8	G8D	gGA	gAT	4	4	B.1.243	0.000278
ORF8	8	G8R	Gga	Aga	4	4	B.1.258.17	0.000416
ORF8	8	G8E	gGa	gAa	4	4	B.1.36.29	0.002069
ORF8	8	G8V	gGa	gTa	4	4	B.1.525	0.000453
ORF8	8	G8A	gGa	gCa	4	4	B.1.617.2	0.000015
ORF8	8	G8X	Gga	Tga	4	4	B.1.628	0.001409
ORF8	8	G8X	Gga	Tga	4	4	B.4	0.00883
ORF8	8	G8R	Gga	Aga	4	4	C.26	0.029412
ORF8	8	G8X	Gga	Tga	3	3	A.19	0.028302
ORF8	8	G8Y	GGA	TAC	3	3	All	0.000001
ORF8	8	G8N	GGA	AAC	3	3	All	0.000001
ORF8	8	G8T	GGA	ACG	2	3	All	0
ORF8	8	G8T	GGa	ACa	1	3	All	0
ORF8	8	G8del	GGA	---	3	3	AY.103	0.000019
ORF8	8	G8R	Gga	Aga	3	3	AY.114	0.000693
ORF8	8	G8E	gGa	gAa	3	3	AY.117	0.000254
ORF8	8	G8X	Gga	Tga	3	3	AY.119	0.000106
ORF8	8	G8E	gGa	gAa	3	3	AY.119	0.000106
ORF8	8	G8V	gGa	gTa	3	3	AY.120	0.000112
ORF8	8	G8R	Gga	Aga	3	3	AY.23	0.000209
ORF8	8	G8V	gGa	gTa	3	3	AY.27	0.000194
ORF8	8	G8V	gGa	gTa	3	3	AY.32	0.001597
ORF8	8	G8E	gGa	gAa	3	3	AY.34	0.000291
ORF8	8	G8del	GGA	---	3	3	AY.37	0.000948
ORF8	8	G8G	ggA	ggG	3	3	AY.39.1	0.000119
ORF8	8	G8V	gGa	gTa	3	3	AY.39.1	0.000119
ORF8	8	G8del	GGA	---	3	3	AY.4.2	0.000065
ORF8	8	G8R	Gga	Aga	3	3	AY.4.5	0.000322
ORF8	8	G8X	Gga	Tga	3	3	AY.40	0.002893
ORF8	8	G8R	Gga	Aga	3	3	AY.42	0.000121
ORF8	8	G8L	GGa	CTa	1	3	AY.43	0.000004
ORF8	8	G8L	GGA	CTT	1	3	AY.43	0.000004
ORF8	8	G8L	GGa	TTa	1	3	AY.43	0.000004
ORF8	8	G8E	gGa	gAa	3	3	AY.45	0.000365
ORF8	8	G8R	Gga	Aga	3	3	AY.46	0.000312
ORF8	8	G8V	gGa	gTa	3	3	AY.47	0.000093
ORF8	8	G8V	gGa	gTa	3	3	AY.49	0.009585
ORF8	8	G8V	gGa	gTa	3	3	AY.5.3	0.001012
ORF8	8	G8X	Gga	Tga	3	3	AY.6	0.000123
ORF8	8	G8R	Gga	Aga	3	3	AY.73	0.001996
ORF8	8	G8del	GGA	---	3	3	AY.75	0.000168
ORF8	8	G8G	ggA	ggT	2	3	AY.75	0.000112
ORF8	8	G8G	ggA	ggG	1	3	AY.75	0.000056
ORF8	8	G8V	gGa	gTa	3	3	AY.75.1	0.000541
ORF8	8	G8V	gGa	gTa	3	3	AY.78	0.004622
ORF8	8	G8V	gGa	gTa	3	3	AY.91	0.002191
ORF8	8	G8R	Gga	Aga	3	3	AY.98	0.000237
ORF8	8	G8E	gGa	gAa	3	3	AY.98	0.000237
ORF8	8	G8X	Gga	Tga	3	3	AY.98	0.000237
ORF8	8	G8X	Gga	Tga	3	3	AY.98.1	0.000145
ORF8	8	G8del	GGA	---	3	3	AY.98.1	0.000145
ORF8	8	G8E	gGa	gAa	3	3	AY.99.2	0.000276
ORF8	8	G8E	gGa	gAa	3	3	B.1.1	0.000054
ORF8	8	G8X	Gga	Tga	3	3	B.1.1.1	0.00098
ORF8	8	G8X	Gga	Tga	3	3	B.1.1.207	0.003546
ORF8	8	G8R	Gga	Aga	3	3	B.1.1.220	0.005576
ORF8	8	G8X	Gga	Tga	3	3	B.1.1.222	0.000612
ORF8	8	G8V	gGa	gTa	3	3	B.1.1.25	0.001706
ORF8	8	G8E	gGa	gAa	3	3	B.1.1.306	0.001315
ORF8	8	G8V	gGa	gTa	3	3	B.1.1.318	0.000905
ORF8	8	G8V	gGa	gTa	3	3	B.1.1.326	0.005282
ORF8	8	G8R	Gga	Aga	3	3	B.1.1.37	0.000579
ORF8	8	G8V	gGa	gTa	3	3	B.1.1.434	0.001046
ORF8	8	G8X	Gga	Tga	3	3	B.1.210	0.006397
ORF8	8	G8G	ggA	ggG	3	3	B.1.214.2	0.001799
ORF8	8	G8X	Gga	Tga	3	3	B.1.243	0.000209
ORF8	8	G8V	gGa	gTa	3	3	B.1.351	0.000089
ORF8	8	G8del	GGA	---	3	3	B.1.429	0.000071
ORF8	8	G8V	gGa	gTa	3	3	B.1.474	0.005703
ORF8	8	G8del	GGA	---	3	3	B.1.509	0.002597
ORF8	8	G8V	gGa	gTa	3	3	B.1.621	0.000266
ORF8	8	G8R	Gga	Aga	3	3	B.1.621.1	0.001517
ORF8	8	G8E	gGa	gAa	3	3	P.1.1	0.000953
ORF8	8	G8R	Gga	Aga	3	3	P.1.14	0.000143
ORF8	8	G8V	gGa	gTa	3	3	Q.4	0.001364
ORF8	8	G8X	Gga	Tga	3	3	Q.7	0.003333
ORF8	8	G8K	GGa	AAa	2	2		0.111111
ORF8	8	G8N	GGA	AAC	2	2		0.111111
ORF8	8	G8X	GGa	TAa	2	2		0.111111
ORF8	8	G8L	GGa	TTa	2	2		0.111111
ORF8	8	G8Y	GGA	TAC	2	2		0.111111
ORF8	8	G8S	GgA	AgC	2	2		0.111111
ORF8	8	G8del	GGA	---	2	2		0.111111
ORF8	8	G8F	GGA	TTC	2	2		0.111111
ORF8	8	G8G	ggA	ggC	2	2	A	0.000774
ORF8	8	G8del	GGA	---	2	2	A.2.2	0.003378
ORF8	8	G8X	GGa	TAa	1	2	A.2.2	0.001689
ORF8	8	G8X	Gga	Tga	1	2	A.2.2	0.001689
ORF8	8	G8R	Gga	Aga	2	2	A.2.3	0.009479
ORF8	8	G8V	gGa	gTa	2	2	A.2.5	0.000998
ORF8	8	G8R	Gga	Aga	2	2	A.2.5	0.000998
ORF8	8	G8R	Gga	Aga	2	2	A.5	0.003846
ORF8	8	G8del	GGA	---	2	2	AD.2	0.000438
ORF8	8	G8K	GGa	AAa	2	2	All	0
ORF8	8	G8C	GgA	TgC	1	2	All	0
ORF8	8	G8C	GgA	TgT	1	2	All	0
ORF8	8	G8E	gGa	gAa	2	2	AU.1	0.002532
ORF8	8	G8X	Gga	Tga	2	2	AY.100	0.000092
ORF8	8	G8R	Gga	Aga	2	2	AY.100	0.000092
ORF8	8	G8G	ggA	ggT	2	2	AY.102	0.000053
ORF8	8	G8X	Gga	Tga	2	2	AY.102	0.000053
ORF8	8	G8G	ggA	ggG	2	2	AY.111	0.000366
ORF8	8	G8X	Gga	Tga	2	2	AY.113	0.000285
ORF8	8	G8del2	gGA	g--	2	2	AY.114	0.000462
ORF8	8	G8R	Gga	Aga	2	2	AY.117	0.000169
ORF8	8	G8del	GGA	---	2	2	AY.118	0.000125
ORF8	8	G8E	gGa	gAa	2	2	AY.120	0.000074
ORF8	8	G8V	gGa	gTa	2	2	AY.121	0.000271
ORF8	8	G8R	Gga	Aga	2	2	AY.16.1	0.00094
ORF8	8	G8E	gGa	gAa	2	2	AY.20	0.000078
ORF8	8	G8G	ggA	ggG	1	2	AY.20	0.000039
ORF8	8	G8G	ggA	ggT	1	2	AY.20	0.000039
ORF8	8	G8X	Gga	Tga	2	2	AY.23	0.000139
ORF8	8	G8R	Gga	Aga	2	2	AY.23.1	0.000835
ORF8	8	G8del	GGA	---	2	2	AY.25	0.000012
ORF8	8	G8del	GGA	---	2	2	AY.26	0.000057
ORF8	8	G8X	Gga	Tga	2	2	AY.4.2	0.000043
ORF8	8	G8V	gGa	gTa	2	2	AY.4.3	0.001684
ORF8	8	G8R	Gga	Aga	2	2	AY.4.3	0.001684
ORF8	8	G8E	gGa	gAa	2	2	AY.46	0.000208
ORF8	8	G8V	gGa	gTa	2	2	AY.46	0.000208
ORF8	8	G8E	gGa	gAa	2	2	AY.47	0.000062
ORF8	8	G8X	Gga	Tga	2	2	AY.47	0.000062
ORF8	8	G8del	GGA	---	2	2	AY.47	0.000062
ORF8	8	G8E	gGa	gAa	2	2	AY.61	0.00021
ORF8	8	G8V	gGa	gTa	2	2	AY.65	0.001066
ORF8	8	G8V	gGa	gTa	2	2	AY.67	0.000929
ORF8	8	G8X	Gga	Tga	2	2	AY.67	0.000929
ORF8	8	G8V	gGa	gTa	2	2	AY.69	0.000373
ORF8	8	G8R	Gga	Aga	2	2	AY.75.1	0.000361
ORF8	8	G8X	Gga	Tga	2	2	AY.77	0.002255
ORF8	8	G8V	gGa	gTa	2	2	AY.79	0.002421
ORF8	8	G8V	gGa	gTa	2	2	AY.9.1	0.000167
ORF8	8	G8V	gGa	gTa	2	2	AY.94	0.000885
ORF8	8	G8E	gGa	gAa	2	2	B	0.000256
ORF8	8	G8V	gGa	gTa	2	2	B	0.000256
ORF8	8	G8G	ggA	ggG	1	2	B.1.1	0.000018
ORF8	8	G8G	ggA	ggT	1	2	B.1.1	0.000018
ORF8	8	G8E	gGa	gAa	2	2	B.1.1.176	0.000879
ORF8	8	G8del	GGA	---	2	2	B.1.1.214	0.000111
ORF8	8	G8X	Gga	Tga	2	2	B.1.1.216	0.001781
ORF8	8	G8E	gGa	gAa	2	2	B.1.1.222	0.000408
ORF8	8	G8R	Gga	Aga	2	2	B.1.1.28	0.000622
ORF8	8	G8F	GGA	TTT	2	2	B.1.1.280	0.006173
ORF8	8	G8G	ggA	ggT	2	2	B.1.1.294	0.002532
ORF8	8	G8E	gGa	gAa	2	2	B.1.1.305	0.007722
ORF8	8	G8del	GGA	---	2	2	B.1.1.306	0.000877
ORF8	8	G8X	Gga	Tga	2	2	B.1.1.428	0.018868
ORF8	8	G8X	Gga	Tga	2	2	B.1.1.464	0.002946
ORF8	8	G8X	Gga	Tga	2	2	B.1.1.519	0.000079
ORF8	8	G8del1	Gga	-ga	1	2	B.1.1.7	0.000001
ORF8	8	G8del2	GGA	A--	1	2	B.1.1.7	0.000001
ORF8	8	G8del1	GGA	-NN	1	2	B.1.1.7	0.000001
ORF8	8	G8del2	GGa	--a	1	2	B.1.1.7	0.000001
ORF8	8	G8I	GGa	ATa	2	2	B.1.110.3	0.001437
ORF8	8	G8del	GGA	---	2	2	B.1.126	0.002551
ORF8	8	G8X	Gga	Tga	2	2	B.1.139	0.001466
ORF8	8	G8G	ggA	ggG	2	2	B.1.177	0.000026
ORF8	8	G8E	gGa	gAa	2	2	B.1.177.8	0.001505
ORF8	8	G8V	gGa	gTa	2	2	B.1.221	0.000142
ORF8	8	G8R	Gga	Aga	2	2	B.1.243	0.000139
ORF8	8	G8E	gGa	gAa	2	2	B.1.258.10	0.022727
ORF8	8	G8R	Gga	Aga	2	2	B.1.258.14	0.001961
ORF8	8	G8V	gGa	gTa	2	2	B.1.258.24	0.021505
ORF8	8	G8G	ggA	ggT	1	2	B.1.351	0.00003
ORF8	8	G8G	ggA	ggG	1	2	B.1.351	0.00003
ORF8	8	G8X	Gga	Tga	2	2	B.1.36	0.000292
ORF8	8	G8del	GGA	---	2	2	B.1.36	0.000292
ORF8	8	G8T	GGA	ACG	2	2	B.1.36.16	0.002849
ORF8	8	G8R	Gga	Aga	2	2	B.1.36.29	0.001035
ORF8	8	G8R	Gga	Aga	2	2	B.1.36.8	0.002
ORF8	8	G8E	gGa	gAa	2	2	B.1.409	0.001563
ORF8	8	G8R	Gga	Aga	2	2	B.1.427	0.000101
ORF8	8	G8del	GGA	---	2	2	B.1.427	0.000101
ORF8	8	G8V	gGa	gTa	2	2	B.1.448	0.005249
ORF8	8	G8X	Gga	Tga	2	2	B.1.526	0.000047
ORF8	8	G8X	Gga	Tga	2	2	B.1.558	0.009132
ORF8	8	G8E	gGa	gAa	2	2	B.1.564	0.000852
ORF8	8	G8del1	ggA	gg-	1	2	B.1.596	0.000087
ORF8	8	G8del1	GGa	-Na	1	2	B.1.596	0.000087
ORF8	8	G8del	GGA	---	2	2	B.1.621	0.000177
ORF8	8	G8R	Gga	Aga	2	2	B.1.621	0.000177
ORF8	8	G8R	Gga	Cga	2	2	B.4.7	0.020202
ORF8	8	G8R	Gga	Aga	2	2	C.36	0.001821
ORF8	8	G8V	gGa	gTa	2	2	C.37	0.000232
ORF8	8	G8E	gGa	gAa	2	2	D.2	0.00015
ORF8	8	G8R	Gga	Aga	2	2	P.1.1	0.000635
ORF8	8	G8X	Gga	Tga	2	2	P.1.1	0.000635
ORF8	8	G8V	gGa	gTa	2	2	P.1.15	0.000465
ORF8	8	G8del	GGA	---	2	2	P.1.15	0.000465
ORF8	8	G8X	Gga	Tga	2	2	P.1.16	0.000748
ORF8	8	G8E	gGa	gAa	2	2	P.1.17	0.000324
ORF8	8	G8E	gGa	gAa	2	2	Q.8	0.00033
ORF8	8	G8del	GGA	---	2	2	R.1	0.00018
ORF8	8	G8G	ggA	ggG	1	1		0.055556
ORF8	8	G8E	gGa	gAa	1	1	A.1	0.000282
ORF8	8	G8G	ggA	ggT	1	1	A.2	0.000662
ORF8	8	G8X	Gga	Tga	1	1	A.2	0.000662
ORF8	8	G8E	gGa	gAa	1	1	A.2.2	0.001689
ORF8	8	G8del	GGA	---	1	1	A.2.5	0.000499
ORF8	8	G8V	gGa	gTa	1	1	A.2.5.2	0.001572
ORF8	8	G8del	GGA	---	1	1	A.23.1	0.000704
ORF8	8	G8V	gGa	gTa	1	1	A.28	0.002646
ORF8	8	G8G	ggA	ggT	1	1	A.6	0.005128
ORF8	8	G8E	gGa	gAa	1	1	AA.1	0.007246
ORF8	8	G8R	Gga	Aga	1	1	AD.2	0.000219
ORF8	8	G8del	GGA	---	1	1	AE.4	0.043478
ORF8	8	G8V	gGa	gTa	1	1	AE.8	0.000489
ORF8	8	G8W	GgA	TgG	1	1	All	0
ORF8	8	G8A	gGa	gCa	1	1	AY.103	0.000006
ORF8	8	G8R	Gga	Aga	1	1	AY.106	0.000335
ORF8	8	G8E	gGa	gAa	1	1	AY.107	0.000466
ORF8	8	G8del	GGA	---	1	1	AY.108	0.001103
ORF8	8	G8X	Gga	Tga	1	1	AY.11	0.001339
ORF8	8	G8V	gGa	gTa	1	1	AY.110	0.000113
ORF8	8	G8V	gGa	gTa	1	1	AY.113	0.000142
ORF8	8	G8R	Gga	Aga	1	1	AY.113	0.000142
ORF8	8	G8E	gGa	gAa	1	1	AY.113	0.000142
ORF8	8	G8X	Gga	Tga	1	1	AY.116.1	0.000311
ORF8	8	G8G	ggA	ggG	1	1	AY.117	0.000085
ORF8	8	G8A	gGa	gCa	1	1	AY.117	0.000085
ORF8	8	G8X	Gga	Tga	1	1	AY.118	0.000063
ORF8	8	G8G	ggA	ggG	1	1	AY.119	0.000035
ORF8	8	G8V	gGa	gTa	1	1	AY.12	0.000316
ORF8	8	G8R	Gga	Aga	1	1	AY.120.1	0.000321
ORF8	8	G8X	Gga	Tga	1	1	AY.120.1	0.000321
ORF8	8	G8R	Gga	Aga	1	1	AY.121	0.000135
ORF8	8	G8V	gGa	gTa	1	1	AY.13	0.000161
ORF8	8	G8R	Gga	Aga	1	1	AY.13	0.000161
ORF8	8	G8R	Gga	Aga	1	1	AY.14	0.000088
ORF8	8	G8V	gGa	gTa	1	1	AY.2	0.000356
ORF8	8	G8E	gGa	gAa	1	1	AY.26	0.000028
ORF8	8	G8X	Gga	Tga	1	1	AY.29	0.000016
ORF8	8	G8R	Gga	Aga	1	1	AY.3.1	0.000085
ORF8	8	G8R	Gga	Aga	1	1	AY.32	0.000532
ORF8	8	G8X	Gga	Tga	1	1	AY.32	0.000532
ORF8	8	G8E	gGa	gAa	1	1	AY.33	0.000067
ORF8	8	G8R	Gga	Aga	1	1	AY.34	0.000097
ORF8	8	G8V	gGa	gTa	1	1	AY.34	0.000097
ORF8	8	G8R	Gga	Aga	1	1	AY.34.1	0.00051
ORF8	8	G8V	gGa	gTa	1	1	AY.34.1	0.00051
ORF8	8	G8E	gGa	gAa	1	1	AY.36	0.000148
ORF8	8	G8del	GGA	---	1	1	AY.36	0.000148
ORF8	8	G8A	gGa	gCa	1	1	AY.39	0.000025
ORF8	8	G8X	Gga	Tga	1	1	AY.39.1	0.00004
ORF8	8	G8G	ggA	ggG	1	1	AY.4.2	0.000022
ORF8	8	G8X	Gga	Tga	1	1	AY.4.5	0.000107
ORF8	8	G8E	gGa	gAa	1	1	AY.42	0.00004
ORF8	8	G8del1	Gga	-ga	1	1	AY.43	0.000004
ORF8	8	G8C	GgA	TgT	1	1	AY.43	0.000004
ORF8	8	G8F	GGA	TTT	1	1	AY.43	0.000004
ORF8	8	G8G	ggA	ggG	1	1	AY.45	0.000122
ORF8	8	G8X	Gga	Tga	1	1	AY.45	0.000122
ORF8	8	G8X	Gga	Tga	1	1	AY.46	0.000104
ORF8	8	G8R	Gga	Aga	1	1	AY.46.1	0.001027
ORF8	8	G8E	gGa	gAa	1	1	AY.46.2	0.000635
ORF8	8	G8X	Gga	Tga	1	1	AY.46.3	0.000934
ORF8	8	G8E	gGa	gAa	1	1	AY.46.4	0.000165
ORF8	8	G8V	gGa	gTa	1	1	AY.46.4	0.000165
ORF8	8	G8del	GGA	---	1	1	AY.46.4	0.000165
ORF8	8	G8R	Gga	Aga	1	1	AY.46.6	0.000072
ORF8	8	G8X	Gga	Tga	1	1	AY.46.6	0.000072
ORF8	8	G8G	ggA	ggG	1	1	AY.48	0.000465
ORF8	8	G8V	gGa	gTa	1	1	AY.48	0.000465
ORF8	8	G8E	gGa	gAa	1	1	AY.5.3	0.000337
ORF8	8	G8L	GGa	TTa	1	1	AY.5.3	0.000337
ORF8	8	G8R	Gga	Aga	1	1	AY.5.4	0.000277
ORF8	8	G8X	Gga	Tga	1	1	AY.5.4	0.000277
ORF8	8	G8V	gGa	gTa	1	1	AY.51	0.000909
ORF8	8	G8R	Gga	Aga	1	1	AY.53	0.000288
ORF8	8	G8del	GGA	---	1	1	AY.55	0.000917
ORF8	8	G8G	ggA	ggG	1	1	AY.55	0.000917
ORF8	8	G8X	Gga	Tga	1	1	AY.55	0.000917
ORF8	8	G8V	gGa	gTa	1	1	AY.56	0.001605
ORF8	8	G8G	ggA	ggG	1	1	AY.57	0.000656
ORF8	8	G8G	ggA	ggG	1	1	AY.59	0.00053
ORF8	8	G8del	GGA	---	1	1	AY.61	0.000105
ORF8	8	G8X	Gga	Tga	1	1	AY.62	0.000436
ORF8	8	G8X	Gga	Tga	1	1	AY.63	0.000387
ORF8	8	G8R	Gga	Aga	1	1	AY.64	0.000595
ORF8	8	G8del	GGA	---	1	1	AY.67	0.000464
ORF8	8	G8R	Gga	Aga	1	1	AY.67	0.000464
ORF8	8	G8R	Gga	Aga	1	1	AY.68	0.000274
ORF8	8	G8X	Gga	Tga	1	1	AY.70	0.000209
ORF8	8	G8G	ggA	ggG	1	1	AY.70	0.000209
ORF8	8	G8del2	GGa	--a	1	1	AY.74	0.000116
ORF8	8	G8X	Gga	Tga	1	1	AY.74	0.000116
ORF8	8	G8E	gGa	gAa	1	1	AY.76	0.004831
ORF8	8	G8V	gGa	gTa	1	1	AY.8	0.000606
ORF8	8	G8E	gGa	gAa	1	1	AY.82	0.001357
ORF8	8	G8V	gGa	gTa	1	1	AY.83	0.001724
ORF8	8	G8V	gGa	gTa	1	1	AY.84	0.000437
ORF8	8	G8E	gGa	gAa	1	1	AY.84	0.000437
ORF8	8	G8R	Gga	Aga	1	1	AY.85	0.000427
ORF8	8	G8X	Gga	Tga	1	1	AY.87	0.000833
ORF8	8	G8R	Gga	Aga	1	1	AY.87	0.000833
ORF8	8	G8del	GGA	---	1	1	AY.9	0.000068
ORF8	8	G8R	Gga	Aga	1	1	AY.9	0.000068
ORF8	8	G8R	Gga	Cga	1	1	AY.9.1	0.000084
ORF8	8	G8V	gGa	gTa	1	1	AY.90	0.000684
ORF8	8	G8V	gGa	gTa	1	1	AY.93	0.000273
ORF8	8	G8A	gGa	gCa	1	1	AY.93	0.000273
ORF8	8	G8G	ggA	ggG	1	1	AY.96	0.002075
ORF8	8	G8E	gGa	gAa	1	1	AY.97	0.001701
ORF8	8	G8G	ggA	ggG	1	1	AY.98	0.000079
ORF8	8	G8R	Gga	Aga	1	1	AY.98.1	0.000048
ORF8	8	G8E	gGa	gAa	1	1	AY.98.1	0.000048
ORF8	8	G8del	GGA	---	1	1	AY.99	0.001049
ORF8	8	G8del	GGA	---	1	1	AY.99.1	0.001553
ORF8	8	G8V	gGa	gTa	1	1	AY.99.2	0.000092
ORF8	8	G8del	GGA	---	1	1	AZ.5	0.003509
ORF8	8	G8Y	GGA	TAC	1	1	B.1	0.000009
ORF8	8	G8T	GGa	ACa	1	1	B.1.1	0.000018
ORF8	8	G8del1	Gga	-ga	1	1	B.1.1	0.000018
ORF8	8	G8N	GGA	AAC	1	1	B.1.1	0.000018
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.1	0.000327
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.10	0.001115
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.141	0.002012
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.164	0.005155
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.169	0.018182
ORF8	8	G8X	Gga	Tga	1	1	B.1.1.174	0.003378
ORF8	8	G8del	GGA	---	1	1	B.1.1.174	0.003378
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.189	0.001513
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.189	0.001513
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.198	0.001468
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.216	0.00089
ORF8	8	G8del	GGA	---	1	1	B.1.1.216	0.00089
ORF8	8	G8del	GGA	---	1	1	B.1.1.25	0.000569
ORF8	8	G8X	Gga	Tga	1	1	B.1.1.25	0.000569
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.251	0.007937
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.263	0.001558
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.279	0.001121
ORF8	8	G8L	GGa	TTa	1	1	B.1.1.280	0.003086
ORF8	8	G8A	gGa	gCa	1	1	B.1.1.282	0.011628
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.284	0.000107
ORF8	8	G8del	GGA	---	1	1	B.1.1.284	0.000107
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.284	0.000107
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.301	0.001179
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.306	0.000438
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.311	0.000358
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.317	0.000412
ORF8	8	G8del	GGA	---	1	1	B.1.1.318	0.000302
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.322	0.008772
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.33	0.000421
ORF8	8	G8del	GGA	---	1	1	B.1.1.354	0.004386
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.37	0.000193
ORF8	8	G8X	Gga	Tga	1	1	B.1.1.37	0.000193
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.388	0.045455
ORF8	8	G8S	GgA	AgT	1	1	B.1.1.396	0.045455
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.413	0.006897
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.434	0.000349
ORF8	8	G8V	gGa	gTa	1	1	B.1.1.46	0.004367
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.464	0.001473
ORF8	8	G8del	GGA	---	1	1	B.1.1.50	0.000679
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.51	0.001718
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.519	0.00004
ORF8	8	G8E	gGa	gAa	1	1	B.1.1.53	0.013699
ORF8	8	G8R	Gga	Aga	1	1	B.1.1.63	0.000386
ORF8	8	G8D	gGA	gAT	1	1	B.1.1.7	0.000001
ORF8	8	G8del	GGA	---	1	1	B.1.1.70	0.000341
ORF8	8	G8G	ggA	ggG	1	1	B.1.1.71	0.006061
ORF8	8	G8X	Gga	Tga	1	1	B.1.110.3	0.000718
ORF8	8	G8S	GgA	AgT	1	1	B.1.126	0.001276
ORF8	8	G8R	Gga	Aga	1	1	B.1.128	0.000635
ORF8	8	G8G	ggA	ggG	1	1	B.1.160	0.000031
ORF8	8	G8E	gGa	gAa	1	1	B.1.160.16	0.000929
ORF8	8	G8V	gGa	gTa	1	1	B.1.169	0.014925
ORF8	8	G8G	ggA	ggT	1	1	B.1.177.21	0.000076
ORF8	8	G8V	gGa	gTa	1	1	B.1.177.33	0.001645
ORF8	8	G8R	Gga	Aga	1	1	B.1.177.4	0.000211
ORF8	8	G8V	gGa	gTa	1	1	B.1.177.42	0.000894
ORF8	8	G8del	GGA	---	1	1	B.1.177.54	0.000606
ORF8	8	G8V	gGa	gTa	1	1	B.1.177.6	0.000977
ORF8	8	G8E	gGa	gAa	1	1	B.1.177.60	0.000218
ORF8	8	G8F	GGA	TTT	1	1	B.1.177.63	0.002703
ORF8	8	G8del	GGA	---	1	1	B.1.177.7	0.000165
ORF8	8	G8R	Gga	Aga	1	1	B.1.177.75	0.001041
ORF8	8	G8del	GGA	---	1	1	B.1.177.83	0.001481
ORF8	8	G8del	GGA	---	1	1	B.1.195	0.005025
ORF8	8	G8V	gGa	gTa	1	1	B.1.212	0.016667
ORF8	8	G8R	Gga	Aga	1	1	B.1.214	0.003663
ORF8	8	G8E	gGa	gAa	1	1	B.1.215	0.009615
ORF8	8	G8G	ggA	ggG	1	1	B.1.234	0.000132
ORF8	8	G8X	Gga	Tga	1	1	B.1.234	0.000132
ORF8	8	G8del	GGA	---	1	1	B.1.258	0.000067
ORF8	8	G8del	GGA	---	1	1	B.1.258.12	0.007874
ORF8	8	G8V	gGa	gTa	1	1	B.1.258.17	0.000104
ORF8	8	G8E	gGa	gAa	1	1	B.1.346	0.001311
ORF8	8	G8E	gGa	gAa	1	1	B.1.351	0.00003
ORF8	8	G8del	GGA	---	1	1	B.1.351.2	0.000303
ORF8	8	G8X	Gga	Tga	1	1	B.1.351.5	0.0006
ORF8	8	G8R	Gga	Aga	1	1	B.1.359	0.022727
ORF8	8	G8D	gGA	gAT	1	1	B.1.36	0.000146
ORF8	8	G8E	gGa	gAa	1	1	B.1.36.17	0.000494
ORF8	8	G8X	Gga	Tga	1	1	B.1.36.18	0.00042
ORF8	8	G8R	Gga	Aga	1	1	B.1.36.26	0.002857
ORF8	8	G8del	GGA	---	1	1	B.1.36.29	0.000517
ORF8	8	G8V	gGa	gTa	1	1	B.1.36.7	0.004
ORF8	8	G8V	gGa	gTa	1	1	B.1.367	0.000792
ORF8	8	G8X	Gga	Tga	1	1	B.1.369	0.000285
ORF8	8	G8E	gGa	gAa	1	1	B.1.369	0.000285
ORF8	8	G8del1	ggA	gg-	1	1	B.1.375	0.00082
ORF8	8	G8V	gGa	gTa	1	1	B.1.377	0.004566
ORF8	8	G8V	gGa	gTa	1	1	B.1.408	0.00369
ORF8	8	G8V	gGa	gTa	1	1	B.1.409	0.000781
ORF8	8	G8X	Gga	Tga	1	1	B.1.409	0.000781
ORF8	8	G8V	gGa	gTa	1	1	B.1.416	0.001269
ORF8	8	G8E	gGa	gAa	1	1	B.1.427	0.00005
ORF8	8	G8G	ggA	ggT	1	1	B.1.427	0.00005
ORF8	8	G8X	Gga	Tga	1	1	B.1.429	0.000024
ORF8	8	G8G	ggA	ggG	1	1	B.1.429	0.000024
ORF8	8	G8E	gGa	gAa	1	1	B.1.448	0.002625
ORF8	8	G8V	gGa	gTa	1	1	B.1.462	0.007246
ORF8	8	G8del	GGA	---	1	1	B.1.468	0.005714
ORF8	8	G8G	ggA	ggC	1	1	B.1.474	0.001901
ORF8	8	G8R	Gga	Aga	1	1	B.1.503	0.002488
ORF8	8	G8V	gGa	gTa	1	1	B.1.509	0.000866
ORF8	8	G8E	gGa	gAa	1	1	B.1.517	0.000427
ORF8	8	G8E	gGa	gAa	1	1	B.1.523	0.002451
ORF8	8	G8E	gGa	gAa	1	1	B.1.526	0.000024
ORF8	8	G8V	gGa	gTa	1	1	B.1.526	0.000024
ORF8	8	G8V	gGa	gTa	1	1	B.1.561	0.000397
ORF8	8	G8R	Gga	Aga	1	1	B.1.565	0.00081
ORF8	8	G8V	gGa	gTa	1	1	B.1.575	0.000303
ORF8	8	G8R	Gga	Aga	1	1	B.1.575	0.000303
ORF8	8	G8V	gGa	gTa	1	1	B.1.576	0.000907
ORF8	8	G8G	ggA	ggT	1	1	B.1.577	0.000687
ORF8	8	G8E	gGa	gAa	1	1	B.1.577	0.000687
ORF8	8	G8D	gGA	gAT	1	1	B.1.577	0.000687
ORF8	8	G8R	Gga	Aga	1	1	B.1.582	0.000491
ORF8	8	G8del	GGA	---	1	1	B.1.582	0.000491
ORF8	8	G8E	gGa	gAa	1	1	B.1.595	0.000261
ORF8	8	G8X	Gga	Tga	1	1	B.1.595	0.000261
ORF8	8	G8E	gGa	gAa	1	1	B.1.596	0.000087
ORF8	8	G8D	gGA	gAT	1	1	B.1.609	0.000479
ORF8	8	G8R	Gga	Aga	1	1	B.1.617.1	0.000129
ORF8	8	G8del	GGA	---	1	1	B.1.617.1	0.000129
ORF8	8	G8del1	Gga	-ga	1	1	B.1.617.2	0.000004
ORF8	8	G8L	GGa	TTa	1	1	B.1.617.2	0.000004
ORF8	8	G8W	GgA	TgG	1	1	B.1.617.2	0.000004
ORF8	8	G8V	gGa	gTa	1	1	B.1.619	0.000871
ORF8	8	G8G	ggA	ggT	1	1	B.1.620	0.000946
ORF8	8	G8G	ggA	ggG	1	1	B.1.628	0.000352
ORF8	8	G8del	GGA	---	1	1	B.1.630	0.005236
ORF8	8	G8V	gGa	gTa	1	1	B.1.637	0.000073
ORF8	8	G8R	Gga	Aga	1	1	B.28	0.003279
ORF8	8	G8X	Gga	Tga	1	1	B.29	0.003509
ORF8	8	G8del	GGA	---	1	1	B.40	0.000364
ORF8	8	G8del1	ggA	gg-	1	1	B.40	0.000364
ORF8	8	G8R	Gga	Aga	1	1	B.6	0.00091
ORF8	8	G8V	gGa	gTa	1	1	B.6	0.00091
ORF8	8	G8E	gGa	gAa	1	1	B.6.6	0.000889
ORF8	8	G8R	Gga	Aga	1	1	C.14	0.004329
ORF8	8	G8del	GGA	---	1	1	C.26	0.007353
ORF8	8	G8G	ggA	ggG	1	1	C.36	0.000911
ORF8	8	G8R	Gga	Aga	1	1	C.37	0.000116
ORF8	8	G8X	Gga	Tga	1	1	C.37	0.000116
ORF8	8	G8R	Gga	Aga	1	1	C.37.1	0.002618
ORF8	8	G8R	Gga	Aga	1	1	D.2	0.000075
ORF8	8	G8X	Gga	Tga	1	1	D.2	0.000075
ORF8	8	G8R	Gga	Aga	1	1	D.5	0.004975
ORF8	8	G8R	Gga	Aga	1	1	L.3	0.003546
ORF8	8	G8del	GGA	---	1	1	N.3	0.005814
ORF8	8	G8del	GGA	---	1	1	N.6	0.007092
ORF8	8	G8G	ggA	ggT	1	1	P.1	0.000016
ORF8	8	G8V	gGa	gTa	1	1	P.1.1	0.000318
ORF8	8	G8del	GGA	---	1	1	P.1.12	0.000484
ORF8	8	G8X	Gga	Tga	1	1	P.1.13	0.000898
ORF8	8	G8del	GGA	---	1	1	P.1.14	0.000048
ORF8	8	G8X	Gga	Tga	1	1	P.1.14	0.000048
ORF8	8	G8V	gGa	gTa	1	1	P.1.14	0.000048
ORF8	8	G8X	Gga	Tga	1	1	P.1.15	0.000232
ORF8	8	G8C	GgA	TgC	1	1	P.1.17	0.000162
ORF8	8	G8L	GGA	TTG	1	1	P.1.17	0.000162
ORF8	8	G8del	GGA	---	1	1	P.1.17	0.000162
ORF8	8	G8X	Gga	Tga	1	1	P.1.7	0.000319
ORF8	8	G8E	gGa	gAa	1	1	P.1.7	0.000319
ORF8	8	G8R	Gga	Aga	1	1	P.2	0.000187
ORF8	8	G8G	ggA	ggT	1	1	P.2	0.000187
ORF8	8	G8X	Gga	Tga	1	1	P.2	0.000187
ORF8	8	G8E	gGa	gAa	1	1	Q.1	0.000126
ORF8	8	G8R	Gga	Aga	1	1	Q.2	0.000613
ORF8	8	G8del	GGA	---	1	1	Q.2	0.000613
ORF8	8	G8X	Gga	Tga	1	1	Q.3	0.000145
ORF8	8	G8V	gGa	gTa	1	1	Q.8	0.000165
ORF8	8	G8V	gGa	gTa	1	1	W.1	0.008696

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.