CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 69

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF869S69LnonsyntCatTa39693969128098-28100
ORF869S69PnonsynTcaCca16661666128098-28100
ORF869S69deldelTCA---10101010128098-28100
ORF869S69SsyntcAtcT2841650.58098628098-28100
ORF869S69SsyntcAtcG2841150.4049328098-28100
ORF869S69SsyntcAtcC28440.014084528098-28100
ORF869S69AnonsynTcaGca1731690.97687928098-28100
ORF869S69AnonsynTcAGcT17340.023121428098-28100
ORF869S69TnonsynTcaAca46450.97826128098-28100
ORF869S69XnonsyntCatAa46350.7608728098-28100
ORF869S69XnonsyntCatGa46110.2391328098-28100
ORF869S69TnonsynTcAAcC4610.021739128098-28100
ORF869S69del1deltCat-a33290.87878828098-28100
ORF869S69del1deltcAtc-3330.090909128098-28100
ORF869S69del1delTca-ca3310.03030328098-28100
ORF869S69del2delTCa--a88128098-28100
ORF869S69VnonsynTCaGTa420.528098-28100
ORF869S69VnonsynTCAGTT420.528098-28100
ORF869S69FnonsyntCAtTT320.66666728098-28100
ORF869S69FnonsyntCAtTC310.33333328098-28100
ORF869S69InonsynTCaATa210.528098-28100
ORF869S69GnonsynTCAGGT210.528098-28100
ORF869S69GnonsynTCaGGa210.528098-28100
ORF869S69InonsynTCAATC210.528098-28100
ORF869S69CnonsyntCAtGT11128098-28100
ORF869S69WnonsyntCAtGG11128098-28100

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF869S69LtCatTa39693969All0.000759
ORF869S69LtCatTa19941994B.1.617.10.257158
ORF869S69PTcaCca16661666All0.000319
ORF869S69delTCA---10101010All0.000193
ORF869S69LtCatTa631631AY.40.000982
ORF869S69LtCatTa558558AY.400.538091
ORF869S69PTcaCca377377B.1.1.70.000337
ORF869S69StcAtcT165284All0.000032
ORF869S69StcAtcG115284All0.000022
ORF869S69StcAtcC4284All0.000001
ORF869S69delTCA---270270B.1.1.70.000242
ORF869S69LtCatTa226226B.10.00207
ORF869S69PTcaCca178178AY.40.000277
ORF869S69ATcaGca169173All0.000032
ORF869S69ATcAGcT4173All0.000001
ORF869S69LtCatTa102102B.1.20.000898
ORF869S69StcAtcT8593B.1.1.70.000076
ORF869S69StcAtcG893B.1.1.70.000007
ORF869S69PTcaCca9191AY.250.000547
ORF869S69PTcaCca9191AY.390.002249
ORF869S69LtCatTa8080B.1.4230.816327
ORF869S69delTCA---7272AY.40.000112
ORF869S69LtCatTa6868B.1.1.70.000061
ORF869S69delTCA---5858B.1.1.2940.073418
ORF869S69PTcaCca5353B.1.617.20.0002
ORF869S69PTcaCca5252B.1.4650.197719
ORF869S69PTcaCca5151AY.30.000507
ORF869S69TTcaAca4546All0.000009
ORF869S69XtCatAa3546All0.000007
ORF869S69XtCatGa1146All0.000002
ORF869S69TTcAAcC146All0
ORF869S69delTCA---4545B.1.3510.001338
ORF869S69PTcaCca4545B.1.5300.321429
ORF869S69LtCatTa4242AY.430.000186
ORF869S69PTcaCca4242B.1.2340.005542
ORF869S69delTCA---3838AY.290.000599
ORF869S69delTCA---3838B.1.1600.001185
ORF869S69PTcaCca3636B.10.00033
ORF869S69ATcaGca3535AY.230.002441
ORF869S69delTCA---3535B.1.10.000635
ORF869S69PTcaCca3434B.1.1.2140.001886
ORF869S69delTCA---3434B.1.1.2220.006936
ORF869S69PTcaCca3434B.1.5750.010316
ORF869S69del1tCat-a2933All0.000006
ORF869S69del1tcAtc-333All0.000001
ORF869S69del1Tca-ca133All0
ORF869S69PTcaCca3333AY.430.000146
ORF869S69delTCA---3333B.1.2430.002296
ORF869S69ATcaGca3232AY.250.000192
ORF869S69delTCA---3131AY.440.000189
ORF869S69PTcaCca3131B.1.177.370.837838
ORF869S69LtCatTa3131B.1.2510.673913
ORF869S69PTcaCca3030P.10.000473
ORF869S69del1tCat-a2929B.1.617.10.00374
ORF869S69PTcaCca2828AY.440.00017
ORF869S69LtCatTa2828AY.440.00017
ORF869S69ATcaGca2727B.1.2580.001797
ORF869S69StcAtcG2626AY.1130.003702
ORF869S69PTcaCca2525B.1.1.5190.000993
ORF869S69PTcaCca2424P.1.140.001147
ORF869S69LtCatTa2323AY.1030.000143
ORF869S69LtCatTa2323AY.30.000229
ORF869S69StcAtcG1623AY.40.000025
ORF869S69StcAtcT623AY.40.000009
ORF869S69StcAtcC123AY.40.000002
ORF869S69PTcaCca2323B.1.10.000417
ORF869S69LtCatTa2323B.1.2430.0016
ORF869S69delTCA---2222P.10.000347
ORF869S69ATcaGca2121AY.470.000653
ORF869S69PTcaCca2020B.1.20.000176
ORF869S69LtCatTa1919B.1.1.2220.003876
ORF869S69PTcaCca1919B.1.3510.000565
ORF869S69TTcaAca1919C.370.002205
ORF869S69delTCA---1818AY.30.000179
ORF869S69delTCA---1818B0.002301
ORF869S69StcAtcT1518B.1.617.20.000056
ORF869S69StcAtcG318B.1.617.20.000011
ORF869S69LtCatTa1717AY.60.000699
ORF869S69delTCA---1616AY.1030.000099
ORF869S69StcAtcG1616B.1.20.000141
ORF869S69ATcaGca1616B.1.20.000141
ORF869S69TTcaAca1515AY.1030.000093
ORF869S69PTcaCca1515AY.120.10.004815
ORF869S69XtCatAa1415B.1.1.70.000013
ORF869S69XtCatGa115B.1.1.70.000001
ORF869S69PTcaCca1515B.1.5260.000353
ORF869S69PTcaCca1414AY.1000.000644
ORF869S69delTCA---1414B.1.20.000123
ORF869S69PTcaCca1212AY.1030.000075
ORF869S69delTCA---1212AY.1180.000752
ORF869S69PTcaCca1212AY.200.000466
ORF869S69PTcaCca1212AY.60.000494
ORF869S69PTcaCca1212B.1.1.5000.24
ORF869S69StcAtcT1212B.1.1.630.00463
ORF869S69delTCA---1212B.1.617.20.000045
ORF869S69PTcaCca1212B.1.6210.001062
ORF869S69StcAtcG1011AY.430.000044
ORF869S69StcAtcT111AY.430.000004
ORF869S69XtCatAa1111AY.99.20.001014
ORF869S69delTCA---1111B.1.1.3180.003319
ORF869S69PTcaCca1111B.1.1770.000145
ORF869S69LtCatTa1111B.1.617.20.000041
ORF869S69delTCA---1010AY.430.000044
ORF869S69ATcaGca1010B.1.1.70.000009
ORF869S69PTcaCca1010B.1.466.20.003912
ORF869S69PTcaCca99AY.1090.006657
ORF869S69PTcaCca99AY.420.000362
ORF869S69PTcaCca99B.1.1.3060.003946
ORF869S69PTcaCca99B.1.36.210.019438
ORF869S69PTcaCca99B.1.4290.000212
ORF869S69LtCatTa99P.10.000142
ORF869S69del2TCa--a88All0.000002
ORF869S69StcAtcT88AY.330.000534
ORF869S69PTcaCca88AY.9.10.00067
ORF869S69delTCA---88B.1.1.2840.000859
ORF869S69delTCA---88B.1.1770.000105
ORF869S69delTCA---77AY.1190.000247
ORF869S69StcAtcG77AY.290.00011
ORF869S69del2TCa--a77AY.750.000392
ORF869S69delTCA---77AY.98.10.000339
ORF869S69PTcaCca77B.1.1.2220.001428
ORF869S69delTCA---77B.1.1.2650.022082
ORF869S69StcAtcT77B.1.1.3050.027027
ORF869S69StcAtcT77B.1.1.3890.042424
ORF869S69PTcaCca77B.1.1600.000218
ORF869S69PTcaCca77B.1.2430.000487
ORF869S69delTCA---77B.1.36.160.009972
ORF869S69delTCA---77B.1.6280.002467
ORF869S69ATcaGca77D.20.000525
ORF869S69delTCA---66AY.1020.000159
ORF869S69delTCA---66AY.260.00017
ORF869S69ATcaGca66AY.40.000009
ORF869S69PTcaCca66AY.4.20.00013
ORF869S69delTCA---66AY.590.003178
ORF869S69StcAtcG66B.1.1.2900.109091
ORF869S69delTCA---66B.1.1.5190.000238
ORF869S69delTCA---66B.1.243.20.086957
ORF869S69delTCA---66B.1.4290.000141
ORF869S69LtCatTa66B.1.6370.000438
ORF869S69delTCA---66P.1.140.000287
ORF869S69delTCA---66P.1.170.000971
ORF869S69delTCA---55AY.250.00003
ORF869S69delTCA---55AY.29.10.001103
ORF869S69StcAtcT55AY.29.10.001103
ORF869S69PTcaCca55AY.330.000334
ORF869S69LtCatTa55AY.750.00028
ORF869S69delTCA---55B.1.1.2140.000277
ORF869S69delTCA---55B.1.2400.001078
ORF869S69PTcaCca55B.1.2580.000333
ORF869S69LtCatTa55B.1.360.00073
ORF869S69delTCA---55C.370.00058
ORF869S69delTCA---55P.1.10.001588
ORF869S69PTcaCca55P.1.10.001588
ORF869S69ATcaGca240.111111
ORF869S69VTCAGTT240.111111
ORF869S69ATcAGcT240.111111
ORF869S69VTCaGTa240.111111
ORF869S69VTCAGTT24All0
ORF869S69VTCaGTa24All0
ORF869S69StcAtcG44AY.1030.000025
ORF869S69PTcaCca44AY.1170.000338
ORF869S69LtCatTa44AY.230.000279
ORF869S69LtCatTa44AY.390.000099
ORF869S69delTCA---44AY.390.000099
ORF869S69delTCA---44AY.4.20.000087
ORF869S69PTcaCca44AY.610.000419
ORF869S69StcAtcT44AY.9.20.000147
ORF869S69PTcaCca44B.1.1.1010.04
ORF869S69PTcaCca44B.1.1.2540.044944
ORF869S69LtCatTa330.166667
ORF869S69FtCAtTT230.111111
ORF869S69StcAtcT230.111111
ORF869S69FtCAtTC130.055556
ORF869S69StcAtcC130.055556
ORF869S69FtCAtTT23All0
ORF869S69FtCAtTC13All0
ORF869S69PTcaCca33AY.1020.00008
ORF869S69delTCA---33AY.1130.000427
ORF869S69PTcaCca33AY.1190.000106
ORF869S69PTcaCca33AY.230.000209
ORF869S69LtCatTa33AY.250.000018
ORF869S69PTcaCca33AY.50.000062
ORF869S69PTcaCca33AY.540.000286
ORF869S69PTcaCca33AY.9.20.00011
ORF869S69PTcaCca33AY.910.002191
ORF869S69PTcaCca33AY.98.10.000145
ORF869S69delTCA---33B.10.000027
ORF869S69LtCatTa33B.1.10.000054
ORF869S69PTcaCca33B.1.177.440.001557
ORF869S69PTcaCca33B.1.177.860.00055
ORF869S69LtCatTa33B.1.2140.010989
ORF869S69delTCA---33B.1.220.003953
ORF869S69LtCatTa33B.1.351.20.000908
ORF869S69StcAtcG33B.1.416.10.004687
ORF869S69delTCA---33B.1.438.10.000322
ORF869S69delTCA---33B.1.5090.002597
ORF869S69XtCatGa33P.10.000047
ORF869S69GTCAGGT120.055556
ORF869S69TTcaAca120.055556
ORF869S69ITCAATC120.055556
ORF869S69ITCaATa120.055556
ORF869S69TTcAAcC120.055556
ORF869S69GTCaGGa120.055556
ORF869S69LtCatTa22A.280.005291
ORF869S69ITCaATa12All0
ORF869S69GTCAGGT12All0
ORF869S69GTCaGGa12All0
ORF869S69ITCAATC12All0
ORF869S69StcAtcT22AY.1020.000053
ORF869S69PTcaCca22AY.1110.000366
ORF869S69XtCatGa22AY.1180.000125
ORF869S69PTcaCca22AY.130.000322
ORF869S69PTcaCca22AY.160.000759
ORF869S69StcAtcG22AY.200.000078
ORF869S69PTcaCca22AY.280.003781
ORF869S69XtCatAa22AY.30.00002
ORF869S69XtCatGa22AY.330.000134
ORF869S69delTCA---22AY.350.000466
ORF869S69delTCA---22AY.39.10.000079
ORF869S69PTcaCca22AY.39.1.10.001449
ORF869S69StcAtcT22AY.4.20.000043
ORF869S69del1tcAtc-22AY.440.000012
ORF869S69StcAtcT22AY.440.000012
ORF869S69delTCA---22AY.470.000062
ORF869S69delTCA---22AY.480.00093
ORF869S69PTcaCca22AY.550.001835
ORF869S69StcAtcG22AY.750.000112
ORF869S69ATcaGca22AY.880.001768
ORF869S69PTcaCca22AY.90.000135
ORF869S69TTcaAca22AY.99.20.000184
ORF869S69LtCatTa22B.1.1.2140.000111
ORF869S69PTcaCca22B.1.1.2370.010811
ORF869S69PTcaCca22B.1.1.2410.004141
ORF869S69LtCatTa22B.1.1.370.000386
ORF869S69PTcaCca22B.1.1260.002551
ORF869S69PTcaCca22B.1.177.100.001756
ORF869S69LtCatTa22B.1.177.730.001133
ORF869S69LtCatTa22B.1.3510.000059
ORF869S69delTCA---22B.1.360.000292
ORF869S69PTcaCca22B.1.36.290.001035
ORF869S69delTCA---22B.1.3690.00057
ORF869S69delTCA---22B.1.4270.000101
ORF869S69delTCA---22B.1.5260.000047
ORF869S69XtCatAa22B.1.617.20.000008
ORF869S69LtCatTa22B.1.6210.000177
ORF869S69delTCA---22B.400.000729
ORF869S69LtCatTa22D.20.00015
ORF869S69delTCA---22P.1.120.000968
ORF869S69ATcaGca22P.1.140.000096
ORF869S69delTCA---22P.1.150.000465
ORF869S69delTCA---22P.1.70.000639
ORF869S69delTCA---22Q.80.00033
ORF869S69CtCAtGT110.055556
ORF869S69XtCatGa110.055556
ORF869S69PTcaCca11A0.000387
ORF869S69PTcaCca11A.10.000282
ORF869S69PTcaCca11AA.40.009091
ORF869S69delTCA---11AE.40.043478
ORF869S69CtCAtGT11All0
ORF869S69WtCAtGG11All0
ORF869S69PTcaCca11AU.10.001266
ORF869S69PTcaCca11AU.20.002421
ORF869S69StcAtcT11AY.1000.000046
ORF869S69LtCatTa11AY.1020.000027
ORF869S69XtCatAa11AY.1030.000006
ORF869S69PTcaCca11AY.1070.000466
ORF869S69delTCA---11AY.1080.001103
ORF869S69LtCatTa11AY.1080.001103
ORF869S69PTcaCca11AY.1080.001103
ORF869S69LtCatTa11AY.1130.000142
ORF869S69PTcaCca11AY.1130.000142
ORF869S69LtCatTa11AY.1170.000085
ORF869S69PTcaCca11AY.1200.000037
ORF869S69delTCA---11AY.120.10.000321
ORF869S69PTcaCca11AY.140.000088
ORF869S69delTCA---11AY.200.000039
ORF869S69ATcaGca11AY.200.000039
ORF869S69TTcaAca11AY.200.000039
ORF869S69StcAtcT11AY.23.10.000417
ORF869S69PTcaCca11AY.260.000028
ORF869S69TTcaAca11AY.260.000028
ORF869S69PTcaCca11AY.290.000016
ORF869S69delTCA---11AY.3.10.000085
ORF869S69LtCatTa11AY.3.10.000085
ORF869S69delTCA---11AY.340.000097
ORF869S69LtCatTa11AY.340.000097
ORF869S69XtCatAa11AY.40.000002
ORF869S69LtCatTa11AY.4.20.000022
ORF869S69LtCatTa11AY.4.40.000409
ORF869S69PTcaCca11AY.4.50.000107
ORF869S69LtCatTa11AY.4.50.000107
ORF869S69LtCatTa11AY.420.00004
ORF869S69XtCatGa11AY.420.00004
ORF869S69ATcaGca11AY.440.000006
ORF869S69StcAtcG11AY.450.000122
ORF869S69PTcaCca11AY.450.000122
ORF869S69ATcaGca11AY.46.60.000072
ORF869S69StcAtcG11AY.470.000031
ORF869S69LtCatTa11AY.480.000465
ORF869S69XtCatAa11AY.50.000021
ORF869S69PTcaCca11AY.5.40.000277
ORF869S69delTCA---11AY.580.000907
ORF869S69ATcaGca11AY.60.000041
ORF869S69delTCA---11AY.690.000187
ORF869S69TTcaAca11AY.70.000196
ORF869S69PTcaCca11AY.70.000196
ORF869S69LtCatTa11AY.740.000116
ORF869S69delTCA---11AY.740.000116
ORF869S69PTcaCca11AY.75.10.00018
ORF869S69delTCA---11AY.840.000437
ORF869S69delTCA---11AY.90.000068
ORF869S69StcAtcG11AY.980.000079
ORF869S69TTcaAca11AY.98.10.000048
ORF869S69LtCatTa11AY.99.20.000092
ORF869S69PTcaCca11B0.000128
ORF869S69XtCatAa11B.10.000009
ORF869S69TTcaAca11B.10.000009
ORF869S69StcAtcG11B.10.000009
ORF869S69StcAtcG11B.1.10.000018
ORF869S69ATcAGcT11B.1.10.000018
ORF869S69del2TCa--a11B.1.10.000018
ORF869S69WtCAtGG11B.1.10.000018
ORF869S69delTCA---11B.1.1.1740.003378
ORF869S69delTCA---11B.1.1.2160.00089
ORF869S69PTcaCca11B.1.1.2190.005
ORF869S69ATcaGca11B.1.1.2320.001815
ORF869S69PTcaCca11B.1.1.2390.032258
ORF869S69delTCA---11B.1.1.250.000569
ORF869S69PTcaCca11B.1.1.250.000569
ORF869S69StcAtcG11B.1.1.250.000569
ORF869S69LtCatTa11B.1.1.250.000569
ORF869S69LtCatTa11B.1.1.2540.011236
ORF869S69delTCA---11B.1.1.2690.001353
ORF869S69PTcaCca11B.1.1.280.000311
ORF869S69PTcaCca11B.1.1.2840.000107
ORF869S69LtCatTa11B.1.1.3060.000438
ORF869S69PTcaCca11B.1.1.3120.001912
ORF869S69delTCA---11B.1.1.3220.008772
ORF869S69LtCatTa11B.1.1.3370.003597
ORF869S69PTcaCca11B.1.1.3480.000796
ORF869S69delTCA---11B.1.1.3540.004386
ORF869S69delTCA---11B.1.1.370.000193
ORF869S69PTcaCca11B.1.1.370.000193
ORF869S69PTcaCca11B.1.1.4860.001577
ORF869S69PTcaCca11B.1.1.500.000679
ORF869S69ATcaGca11B.1.1.5190.00004
ORF869S69PTcaCca11B.1.1.5260.003546
ORF869S69StcAtcC11B.1.1.610.008772
ORF869S69delTCA---11B.1.1.630.000386
ORF869S69delTCA---11B.1.1260.001276
ORF869S69XtCatAa11B.1.1600.000031
ORF869S69PTcaCca11B.1.160.160.000929
ORF869S69PTcaCca11B.1.160.260.002421
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