CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 69 | S69L | nonsyn | tCa | tTa | 3969 | 3969 | 1 | 28098-28100 | |
ORF8 | 69 | S69P | nonsyn | Tca | Cca | 1666 | 1666 | 1 | 28098-28100 | |
ORF8 | 69 | S69del | del | TCA | --- | 1010 | 1010 | 1 | 28098-28100 | |
ORF8 | 69 | S69S | syn | tcA | tcT | 284 | 165 | 0.580986 | 28098-28100 | |
ORF8 | 69 | S69S | syn | tcA | tcG | 284 | 115 | 0.40493 | 28098-28100 | |
ORF8 | 69 | S69S | syn | tcA | tcC | 284 | 4 | 0.0140845 | 28098-28100 | |
ORF8 | 69 | S69A | nonsyn | Tca | Gca | 173 | 169 | 0.976879 | 28098-28100 | |
ORF8 | 69 | S69A | nonsyn | TcA | GcT | 173 | 4 | 0.0231214 | 28098-28100 | |
ORF8 | 69 | S69T | nonsyn | Tca | Aca | 46 | 45 | 0.978261 | 28098-28100 | |
ORF8 | 69 | S69X | nonsyn | tCa | tAa | 46 | 35 | 0.76087 | 28098-28100 | |
ORF8 | 69 | S69X | nonsyn | tCa | tGa | 46 | 11 | 0.23913 | 28098-28100 | |
ORF8 | 69 | S69T | nonsyn | TcA | AcC | 46 | 1 | 0.0217391 | 28098-28100 | |
ORF8 | 69 | S69del1 | del | tCa | t-a | 33 | 29 | 0.878788 | 28098-28100 | |
ORF8 | 69 | S69del1 | del | tcA | tc- | 33 | 3 | 0.0909091 | 28098-28100 | |
ORF8 | 69 | S69del1 | del | Tca | -ca | 33 | 1 | 0.030303 | 28098-28100 | |
ORF8 | 69 | S69del2 | del | TCa | --a | 8 | 8 | 1 | 28098-28100 | |
ORF8 | 69 | S69V | nonsyn | TCa | GTa | 4 | 2 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69V | nonsyn | TCA | GTT | 4 | 2 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69F | nonsyn | tCA | tTT | 3 | 2 | 0.666667 | 28098-28100 | |
ORF8 | 69 | S69F | nonsyn | tCA | tTC | 3 | 1 | 0.333333 | 28098-28100 | |
ORF8 | 69 | S69I | nonsyn | TCa | ATa | 2 | 1 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69G | nonsyn | TCA | GGT | 2 | 1 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69G | nonsyn | TCa | GGa | 2 | 1 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69I | nonsyn | TCA | ATC | 2 | 1 | 0.5 | 28098-28100 | |
ORF8 | 69 | S69C | nonsyn | tCA | tGT | 1 | 1 | 1 | 28098-28100 | |
ORF8 | 69 | S69W | nonsyn | tCA | tGG | 1 | 1 | 1 | 28098-28100 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 69 | S69L | tCa | tTa | 3969 | 3969 | All | 0.000759 |
ORF8 | 69 | S69L | tCa | tTa | 1994 | 1994 | B.1.617.1 | 0.257158 |
ORF8 | 69 | S69P | Tca | Cca | 1666 | 1666 | All | 0.000319 |
ORF8 | 69 | S69del | TCA | --- | 1010 | 1010 | All | 0.000193 |
ORF8 | 69 | S69L | tCa | tTa | 631 | 631 | AY.4 | 0.000982 |
ORF8 | 69 | S69L | tCa | tTa | 558 | 558 | AY.40 | 0.538091 |
ORF8 | 69 | S69P | Tca | Cca | 377 | 377 | B.1.1.7 | 0.000337 |
ORF8 | 69 | S69S | tcA | tcT | 165 | 284 | All | 0.000032 |
ORF8 | 69 | S69S | tcA | tcG | 115 | 284 | All | 0.000022 |
ORF8 | 69 | S69S | tcA | tcC | 4 | 284 | All | 0.000001 |
ORF8 | 69 | S69del | TCA | --- | 270 | 270 | B.1.1.7 | 0.000242 |
ORF8 | 69 | S69L | tCa | tTa | 226 | 226 | B.1 | 0.00207 |
ORF8 | 69 | S69P | Tca | Cca | 178 | 178 | AY.4 | 0.000277 |
ORF8 | 69 | S69A | Tca | Gca | 169 | 173 | All | 0.000032 |
ORF8 | 69 | S69A | TcA | GcT | 4 | 173 | All | 0.000001 |
ORF8 | 69 | S69L | tCa | tTa | 102 | 102 | B.1.2 | 0.000898 |
ORF8 | 69 | S69S | tcA | tcT | 85 | 93 | B.1.1.7 | 0.000076 |
ORF8 | 69 | S69S | tcA | tcG | 8 | 93 | B.1.1.7 | 0.000007 |
ORF8 | 69 | S69P | Tca | Cca | 91 | 91 | AY.25 | 0.000547 |
ORF8 | 69 | S69P | Tca | Cca | 91 | 91 | AY.39 | 0.002249 |
ORF8 | 69 | S69L | tCa | tTa | 80 | 80 | B.1.423 | 0.816327 |
ORF8 | 69 | S69del | TCA | --- | 72 | 72 | AY.4 | 0.000112 |
ORF8 | 69 | S69L | tCa | tTa | 68 | 68 | B.1.1.7 | 0.000061 |
ORF8 | 69 | S69del | TCA | --- | 58 | 58 | B.1.1.294 | 0.073418 |
ORF8 | 69 | S69P | Tca | Cca | 53 | 53 | B.1.617.2 | 0.0002 |
ORF8 | 69 | S69P | Tca | Cca | 52 | 52 | B.1.465 | 0.197719 |
ORF8 | 69 | S69P | Tca | Cca | 51 | 51 | AY.3 | 0.000507 |
ORF8 | 69 | S69T | Tca | Aca | 45 | 46 | All | 0.000009 |
ORF8 | 69 | S69X | tCa | tAa | 35 | 46 | All | 0.000007 |
ORF8 | 69 | S69X | tCa | tGa | 11 | 46 | All | 0.000002 |
ORF8 | 69 | S69T | TcA | AcC | 1 | 46 | All | 0 |
ORF8 | 69 | S69del | TCA | --- | 45 | 45 | B.1.351 | 0.001338 |
ORF8 | 69 | S69P | Tca | Cca | 45 | 45 | B.1.530 | 0.321429 |
ORF8 | 69 | S69L | tCa | tTa | 42 | 42 | AY.43 | 0.000186 |
ORF8 | 69 | S69P | Tca | Cca | 42 | 42 | B.1.234 | 0.005542 |
ORF8 | 69 | S69del | TCA | --- | 38 | 38 | AY.29 | 0.000599 |
ORF8 | 69 | S69del | TCA | --- | 38 | 38 | B.1.160 | 0.001185 |
ORF8 | 69 | S69P | Tca | Cca | 36 | 36 | B.1 | 0.00033 |
ORF8 | 69 | S69A | Tca | Gca | 35 | 35 | AY.23 | 0.002441 |
ORF8 | 69 | S69del | TCA | --- | 35 | 35 | B.1.1 | 0.000635 |
ORF8 | 69 | S69P | Tca | Cca | 34 | 34 | B.1.1.214 | 0.001886 |
ORF8 | 69 | S69del | TCA | --- | 34 | 34 | B.1.1.222 | 0.006936 |
ORF8 | 69 | S69P | Tca | Cca | 34 | 34 | B.1.575 | 0.010316 |
ORF8 | 69 | S69del1 | tCa | t-a | 29 | 33 | All | 0.000006 |
ORF8 | 69 | S69del1 | tcA | tc- | 3 | 33 | All | 0.000001 |
ORF8 | 69 | S69del1 | Tca | -ca | 1 | 33 | All | 0 |
ORF8 | 69 | S69P | Tca | Cca | 33 | 33 | AY.43 | 0.000146 |
ORF8 | 69 | S69del | TCA | --- | 33 | 33 | B.1.243 | 0.002296 |
ORF8 | 69 | S69A | Tca | Gca | 32 | 32 | AY.25 | 0.000192 |
ORF8 | 69 | S69del | TCA | --- | 31 | 31 | AY.44 | 0.000189 |
ORF8 | 69 | S69P | Tca | Cca | 31 | 31 | B.1.177.37 | 0.837838 |
ORF8 | 69 | S69L | tCa | tTa | 31 | 31 | B.1.251 | 0.673913 |
ORF8 | 69 | S69P | Tca | Cca | 30 | 30 | P.1 | 0.000473 |
ORF8 | 69 | S69del1 | tCa | t-a | 29 | 29 | B.1.617.1 | 0.00374 |
ORF8 | 69 | S69P | Tca | Cca | 28 | 28 | AY.44 | 0.00017 |
ORF8 | 69 | S69L | tCa | tTa | 28 | 28 | AY.44 | 0.00017 |
ORF8 | 69 | S69A | Tca | Gca | 27 | 27 | B.1.258 | 0.001797 |
ORF8 | 69 | S69S | tcA | tcG | 26 | 26 | AY.113 | 0.003702 |
ORF8 | 69 | S69P | Tca | Cca | 25 | 25 | B.1.1.519 | 0.000993 |
ORF8 | 69 | S69P | Tca | Cca | 24 | 24 | P.1.14 | 0.001147 |
ORF8 | 69 | S69L | tCa | tTa | 23 | 23 | AY.103 | 0.000143 |
ORF8 | 69 | S69L | tCa | tTa | 23 | 23 | AY.3 | 0.000229 |
ORF8 | 69 | S69S | tcA | tcG | 16 | 23 | AY.4 | 0.000025 |
ORF8 | 69 | S69S | tcA | tcT | 6 | 23 | AY.4 | 0.000009 |
ORF8 | 69 | S69S | tcA | tcC | 1 | 23 | AY.4 | 0.000002 |
ORF8 | 69 | S69P | Tca | Cca | 23 | 23 | B.1.1 | 0.000417 |
ORF8 | 69 | S69L | tCa | tTa | 23 | 23 | B.1.243 | 0.0016 |
ORF8 | 69 | S69del | TCA | --- | 22 | 22 | P.1 | 0.000347 |
ORF8 | 69 | S69A | Tca | Gca | 21 | 21 | AY.47 | 0.000653 |
ORF8 | 69 | S69P | Tca | Cca | 20 | 20 | B.1.2 | 0.000176 |
ORF8 | 69 | S69L | tCa | tTa | 19 | 19 | B.1.1.222 | 0.003876 |
ORF8 | 69 | S69P | Tca | Cca | 19 | 19 | B.1.351 | 0.000565 |
ORF8 | 69 | S69T | Tca | Aca | 19 | 19 | C.37 | 0.002205 |
ORF8 | 69 | S69del | TCA | --- | 18 | 18 | AY.3 | 0.000179 |
ORF8 | 69 | S69del | TCA | --- | 18 | 18 | B | 0.002301 |
ORF8 | 69 | S69S | tcA | tcT | 15 | 18 | B.1.617.2 | 0.000056 |
ORF8 | 69 | S69S | tcA | tcG | 3 | 18 | B.1.617.2 | 0.000011 |
ORF8 | 69 | S69L | tCa | tTa | 17 | 17 | AY.6 | 0.000699 |
ORF8 | 69 | S69del | TCA | --- | 16 | 16 | AY.103 | 0.000099 |
ORF8 | 69 | S69S | tcA | tcG | 16 | 16 | B.1.2 | 0.000141 |
ORF8 | 69 | S69A | Tca | Gca | 16 | 16 | B.1.2 | 0.000141 |
ORF8 | 69 | S69T | Tca | Aca | 15 | 15 | AY.103 | 0.000093 |
ORF8 | 69 | S69P | Tca | Cca | 15 | 15 | AY.120.1 | 0.004815 |
ORF8 | 69 | S69X | tCa | tAa | 14 | 15 | B.1.1.7 | 0.000013 |
ORF8 | 69 | S69X | tCa | tGa | 1 | 15 | B.1.1.7 | 0.000001 |
ORF8 | 69 | S69P | Tca | Cca | 15 | 15 | B.1.526 | 0.000353 |
ORF8 | 69 | S69P | Tca | Cca | 14 | 14 | AY.100 | 0.000644 |
ORF8 | 69 | S69del | TCA | --- | 14 | 14 | B.1.2 | 0.000123 |
ORF8 | 69 | S69P | Tca | Cca | 12 | 12 | AY.103 | 0.000075 |
ORF8 | 69 | S69del | TCA | --- | 12 | 12 | AY.118 | 0.000752 |
ORF8 | 69 | S69P | Tca | Cca | 12 | 12 | AY.20 | 0.000466 |
ORF8 | 69 | S69P | Tca | Cca | 12 | 12 | AY.6 | 0.000494 |
ORF8 | 69 | S69P | Tca | Cca | 12 | 12 | B.1.1.500 | 0.24 |
ORF8 | 69 | S69S | tcA | tcT | 12 | 12 | B.1.1.63 | 0.00463 |
ORF8 | 69 | S69del | TCA | --- | 12 | 12 | B.1.617.2 | 0.000045 |
ORF8 | 69 | S69P | Tca | Cca | 12 | 12 | B.1.621 | 0.001062 |
ORF8 | 69 | S69S | tcA | tcG | 10 | 11 | AY.43 | 0.000044 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 11 | AY.43 | 0.000004 |
ORF8 | 69 | S69X | tCa | tAa | 11 | 11 | AY.99.2 | 0.001014 |
ORF8 | 69 | S69del | TCA | --- | 11 | 11 | B.1.1.318 | 0.003319 |
ORF8 | 69 | S69P | Tca | Cca | 11 | 11 | B.1.177 | 0.000145 |
ORF8 | 69 | S69L | tCa | tTa | 11 | 11 | B.1.617.2 | 0.000041 |
ORF8 | 69 | S69del | TCA | --- | 10 | 10 | AY.43 | 0.000044 |
ORF8 | 69 | S69A | Tca | Gca | 10 | 10 | B.1.1.7 | 0.000009 |
ORF8 | 69 | S69P | Tca | Cca | 10 | 10 | B.1.466.2 | 0.003912 |
ORF8 | 69 | S69P | Tca | Cca | 9 | 9 | AY.109 | 0.006657 |
ORF8 | 69 | S69P | Tca | Cca | 9 | 9 | AY.42 | 0.000362 |
ORF8 | 69 | S69P | Tca | Cca | 9 | 9 | B.1.1.306 | 0.003946 |
ORF8 | 69 | S69P | Tca | Cca | 9 | 9 | B.1.36.21 | 0.019438 |
ORF8 | 69 | S69P | Tca | Cca | 9 | 9 | B.1.429 | 0.000212 |
ORF8 | 69 | S69L | tCa | tTa | 9 | 9 | P.1 | 0.000142 |
ORF8 | 69 | S69del2 | TCa | --a | 8 | 8 | All | 0.000002 |
ORF8 | 69 | S69S | tcA | tcT | 8 | 8 | AY.33 | 0.000534 |
ORF8 | 69 | S69P | Tca | Cca | 8 | 8 | AY.9.1 | 0.00067 |
ORF8 | 69 | S69del | TCA | --- | 8 | 8 | B.1.1.284 | 0.000859 |
ORF8 | 69 | S69del | TCA | --- | 8 | 8 | B.1.177 | 0.000105 |
ORF8 | 69 | S69del | TCA | --- | 7 | 7 | AY.119 | 0.000247 |
ORF8 | 69 | S69S | tcA | tcG | 7 | 7 | AY.29 | 0.00011 |
ORF8 | 69 | S69del2 | TCa | --a | 7 | 7 | AY.75 | 0.000392 |
ORF8 | 69 | S69del | TCA | --- | 7 | 7 | AY.98.1 | 0.000339 |
ORF8 | 69 | S69P | Tca | Cca | 7 | 7 | B.1.1.222 | 0.001428 |
ORF8 | 69 | S69del | TCA | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF8 | 69 | S69S | tcA | tcT | 7 | 7 | B.1.1.305 | 0.027027 |
ORF8 | 69 | S69S | tcA | tcT | 7 | 7 | B.1.1.389 | 0.042424 |
ORF8 | 69 | S69P | Tca | Cca | 7 | 7 | B.1.160 | 0.000218 |
ORF8 | 69 | S69P | Tca | Cca | 7 | 7 | B.1.243 | 0.000487 |
ORF8 | 69 | S69del | TCA | --- | 7 | 7 | B.1.36.16 | 0.009972 |
ORF8 | 69 | S69del | TCA | --- | 7 | 7 | B.1.628 | 0.002467 |
ORF8 | 69 | S69A | Tca | Gca | 7 | 7 | D.2 | 0.000525 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | AY.102 | 0.000159 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | AY.26 | 0.00017 |
ORF8 | 69 | S69A | Tca | Gca | 6 | 6 | AY.4 | 0.000009 |
ORF8 | 69 | S69P | Tca | Cca | 6 | 6 | AY.4.2 | 0.00013 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | AY.59 | 0.003178 |
ORF8 | 69 | S69S | tcA | tcG | 6 | 6 | B.1.1.290 | 0.109091 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | B.1.1.519 | 0.000238 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | B.1.243.2 | 0.086957 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | B.1.429 | 0.000141 |
ORF8 | 69 | S69L | tCa | tTa | 6 | 6 | B.1.637 | 0.000438 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | P.1.14 | 0.000287 |
ORF8 | 69 | S69del | TCA | --- | 6 | 6 | P.1.17 | 0.000971 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | AY.25 | 0.00003 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | AY.29.1 | 0.001103 |
ORF8 | 69 | S69S | tcA | tcT | 5 | 5 | AY.29.1 | 0.001103 |
ORF8 | 69 | S69P | Tca | Cca | 5 | 5 | AY.33 | 0.000334 |
ORF8 | 69 | S69L | tCa | tTa | 5 | 5 | AY.75 | 0.00028 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | B.1.1.214 | 0.000277 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | B.1.240 | 0.001078 |
ORF8 | 69 | S69P | Tca | Cca | 5 | 5 | B.1.258 | 0.000333 |
ORF8 | 69 | S69L | tCa | tTa | 5 | 5 | B.1.36 | 0.00073 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | C.37 | 0.00058 |
ORF8 | 69 | S69del | TCA | --- | 5 | 5 | P.1.1 | 0.001588 |
ORF8 | 69 | S69P | Tca | Cca | 5 | 5 | P.1.1 | 0.001588 |
ORF8 | 69 | S69A | Tca | Gca | 2 | 4 | 0.111111 | |
ORF8 | 69 | S69V | TCA | GTT | 2 | 4 | 0.111111 | |
ORF8 | 69 | S69A | TcA | GcT | 2 | 4 | 0.111111 | |
ORF8 | 69 | S69V | TCa | GTa | 2 | 4 | 0.111111 | |
ORF8 | 69 | S69V | TCA | GTT | 2 | 4 | All | 0 |
ORF8 | 69 | S69V | TCa | GTa | 2 | 4 | All | 0 |
ORF8 | 69 | S69S | tcA | tcG | 4 | 4 | AY.103 | 0.000025 |
ORF8 | 69 | S69P | Tca | Cca | 4 | 4 | AY.117 | 0.000338 |
ORF8 | 69 | S69L | tCa | tTa | 4 | 4 | AY.23 | 0.000279 |
ORF8 | 69 | S69L | tCa | tTa | 4 | 4 | AY.39 | 0.000099 |
ORF8 | 69 | S69del | TCA | --- | 4 | 4 | AY.39 | 0.000099 |
ORF8 | 69 | S69del | TCA | --- | 4 | 4 | AY.4.2 | 0.000087 |
ORF8 | 69 | S69P | Tca | Cca | 4 | 4 | AY.61 | 0.000419 |
ORF8 | 69 | S69S | tcA | tcT | 4 | 4 | AY.9.2 | 0.000147 |
ORF8 | 69 | S69P | Tca | Cca | 4 | 4 | B.1.1.101 | 0.04 |
ORF8 | 69 | S69P | Tca | Cca | 4 | 4 | B.1.1.254 | 0.044944 |
ORF8 | 69 | S69L | tCa | tTa | 3 | 3 | 0.166667 | |
ORF8 | 69 | S69F | tCA | tTT | 2 | 3 | 0.111111 | |
ORF8 | 69 | S69S | tcA | tcT | 2 | 3 | 0.111111 | |
ORF8 | 69 | S69F | tCA | tTC | 1 | 3 | 0.055556 | |
ORF8 | 69 | S69S | tcA | tcC | 1 | 3 | 0.055556 | |
ORF8 | 69 | S69F | tCA | tTT | 2 | 3 | All | 0 |
ORF8 | 69 | S69F | tCA | tTC | 1 | 3 | All | 0 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.102 | 0.00008 |
ORF8 | 69 | S69del | TCA | --- | 3 | 3 | AY.113 | 0.000427 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.119 | 0.000106 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.23 | 0.000209 |
ORF8 | 69 | S69L | tCa | tTa | 3 | 3 | AY.25 | 0.000018 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.5 | 0.000062 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.54 | 0.000286 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.9.2 | 0.00011 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.91 | 0.002191 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | AY.98.1 | 0.000145 |
ORF8 | 69 | S69del | TCA | --- | 3 | 3 | B.1 | 0.000027 |
ORF8 | 69 | S69L | tCa | tTa | 3 | 3 | B.1.1 | 0.000054 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | B.1.177.44 | 0.001557 |
ORF8 | 69 | S69P | Tca | Cca | 3 | 3 | B.1.177.86 | 0.00055 |
ORF8 | 69 | S69L | tCa | tTa | 3 | 3 | B.1.214 | 0.010989 |
ORF8 | 69 | S69del | TCA | --- | 3 | 3 | B.1.22 | 0.003953 |
ORF8 | 69 | S69L | tCa | tTa | 3 | 3 | B.1.351.2 | 0.000908 |
ORF8 | 69 | S69S | tcA | tcG | 3 | 3 | B.1.416.1 | 0.004687 |
ORF8 | 69 | S69del | TCA | --- | 3 | 3 | B.1.438.1 | 0.000322 |
ORF8 | 69 | S69del | TCA | --- | 3 | 3 | B.1.509 | 0.002597 |
ORF8 | 69 | S69X | tCa | tGa | 3 | 3 | P.1 | 0.000047 |
ORF8 | 69 | S69G | TCA | GGT | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69T | Tca | Aca | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69I | TCA | ATC | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69I | TCa | ATa | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69T | TcA | AcC | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69G | TCa | GGa | 1 | 2 | 0.055556 | |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | A.28 | 0.005291 |
ORF8 | 69 | S69I | TCa | ATa | 1 | 2 | All | 0 |
ORF8 | 69 | S69G | TCA | GGT | 1 | 2 | All | 0 |
ORF8 | 69 | S69G | TCa | GGa | 1 | 2 | All | 0 |
ORF8 | 69 | S69I | TCA | ATC | 1 | 2 | All | 0 |
ORF8 | 69 | S69S | tcA | tcT | 2 | 2 | AY.102 | 0.000053 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.111 | 0.000366 |
ORF8 | 69 | S69X | tCa | tGa | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.13 | 0.000322 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.16 | 0.000759 |
ORF8 | 69 | S69S | tcA | tcG | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.28 | 0.003781 |
ORF8 | 69 | S69X | tCa | tAa | 2 | 2 | AY.3 | 0.00002 |
ORF8 | 69 | S69X | tCa | tGa | 2 | 2 | AY.33 | 0.000134 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | AY.35 | 0.000466 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | AY.39.1 | 0.000079 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.39.1.1 | 0.001449 |
ORF8 | 69 | S69S | tcA | tcT | 2 | 2 | AY.4.2 | 0.000043 |
ORF8 | 69 | S69del1 | tcA | tc- | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 69 | S69S | tcA | tcT | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | AY.47 | 0.000062 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | AY.48 | 0.00093 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.55 | 0.001835 |
ORF8 | 69 | S69S | tcA | tcG | 2 | 2 | AY.75 | 0.000112 |
ORF8 | 69 | S69A | Tca | Gca | 2 | 2 | AY.88 | 0.001768 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | AY.9 | 0.000135 |
ORF8 | 69 | S69T | Tca | Aca | 2 | 2 | AY.99.2 | 0.000184 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | B.1.1.214 | 0.000111 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | B.1.1.237 | 0.010811 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | B.1.1.241 | 0.004141 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | B.1.1.37 | 0.000386 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | B.1.126 | 0.002551 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | B.1.177.10 | 0.001756 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | B.1.177.73 | 0.001133 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | B.1.351 | 0.000059 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 69 | S69P | Tca | Cca | 2 | 2 | B.1.36.29 | 0.001035 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | B.1.369 | 0.00057 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF8 | 69 | S69X | tCa | tAa | 2 | 2 | B.1.617.2 | 0.000008 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | B.1.621 | 0.000177 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | B.40 | 0.000729 |
ORF8 | 69 | S69L | tCa | tTa | 2 | 2 | D.2 | 0.00015 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF8 | 69 | S69A | Tca | Gca | 2 | 2 | P.1.14 | 0.000096 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | P.1.7 | 0.000639 |
ORF8 | 69 | S69del | TCA | --- | 2 | 2 | Q.8 | 0.00033 |
ORF8 | 69 | S69C | tCA | tGT | 1 | 1 | 0.055556 | |
ORF8 | 69 | S69X | tCa | tGa | 1 | 1 | 0.055556 | |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | A | 0.000387 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | A.1 | 0.000282 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AA.4 | 0.009091 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AE.4 | 0.043478 |
ORF8 | 69 | S69C | tCA | tGT | 1 | 1 | All | 0 |
ORF8 | 69 | S69W | tCA | tGG | 1 | 1 | All | 0 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AU.1 | 0.001266 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AU.2 | 0.002421 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.102 | 0.000027 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.107 | 0.000466 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.113 | 0.000142 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.113 | 0.000142 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.120 | 0.000037 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.120.1 | 0.000321 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.14 | 0.000088 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | AY.23.1 | 0.000417 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.29 | 0.000016 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.3.1 | 0.000085 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | AY.4 | 0.000002 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.4.2 | 0.000022 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.4.4 | 0.000409 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.4.5 | 0.000107 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.42 | 0.00004 |
ORF8 | 69 | S69X | tCa | tGa | 1 | 1 | AY.42 | 0.00004 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | AY.45 | 0.000122 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.45 | 0.000122 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | AY.46.6 | 0.000072 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.48 | 0.000465 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | AY.5 | 0.000021 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.5.4 | 0.000277 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.58 | 0.000907 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | AY.6 | 0.000041 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.69 | 0.000187 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | AY.7 | 0.000196 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.7 | 0.000196 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.74 | 0.000116 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.74 | 0.000116 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | AY.75.1 | 0.00018 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.84 | 0.000437 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | AY.98 | 0.000079 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | AY.98.1 | 0.000048 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B | 0.000128 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | B.1 | 0.000009 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | B.1 | 0.000009 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1 | 0.000009 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 69 | S69A | TcA | GcT | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 69 | S69del2 | TCa | --a | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 69 | S69W | tCA | tGG | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.219 | 0.005 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | B.1.1.232 | 0.001815 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.239 | 0.032258 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.1.254 | 0.011236 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.269 | 0.001353 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.28 | 0.000311 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.284 | 0.000107 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.1.306 | 0.000438 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.312 | 0.001912 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.322 | 0.008772 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.1.337 | 0.003597 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.348 | 0.000796 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.37 | 0.000193 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.37 | 0.000193 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.486 | 0.001577 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.50 | 0.000679 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | B.1.1.519 | 0.00004 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.1.526 | 0.003546 |
ORF8 | 69 | S69S | tcA | tcC | 1 | 1 | B.1.1.61 | 0.008772 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.1.63 | 0.000386 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.126 | 0.001276 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | B.1.160 | 0.000031 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.160.16 | 0.000929 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.160.26 | 0.002421 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.170 | 0.00431 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 69 | S69X | tCa | tAa | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.177.15 | 0.000631 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.177.17 | 0.000821 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.177.21 | 0.000076 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.177.43 | 0.001477 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.177.63 | 0.002703 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.177.82 | 0.000477 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | B.1.177.86 | 0.000183 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.210 | 0.002132 |
ORF8 | 69 | S69S | tcA | tcC | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.258.12 | 0.007874 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.258.22 | 0.002667 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.258.3 | 0.001675 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.258.3 | 0.001675 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | B.1.311 | 0.000275 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.35 | 0.008475 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.351.3 | 0.000876 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | B.1.36 | 0.000146 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.36.12 | 0.009615 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 69 | S69A | TcA | GcT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.370 | 0.008 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.416.1 | 0.001563 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.427 | 0.00005 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.427 | 0.00005 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.517 | 0.000427 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | B.1.526 | 0.000024 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.526 | 0.000024 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.540 | 0.009709 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.549 | 0.007194 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | B.1.567 | 0.003333 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.595 | 0.000261 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.597 | 0.00463 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.609 | 0.000479 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.617.1 | 0.000129 |
ORF8 | 69 | S69del1 | tcA | tc- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | B.1.621 | 0.000089 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.628 | 0.000352 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.1.9.5 | 0.005682 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.23 | 0.002924 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.29 | 0.003509 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | B.30 | 0.014706 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | B.33 | 0.021277 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | B.34 | 0.013699 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | B.38 | 0.02381 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | C.26 | 0.007353 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | C.36 | 0.000911 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | C.37 | 0.000116 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | D.2 | 0.000075 |
ORF8 | 69 | S69T | Tca | Aca | 1 | 1 | D.2 | 0.000075 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | M.3 | 0.076923 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | N.6 | 0.007092 |
ORF8 | 69 | S69del1 | Tca | -ca | 1 | 1 | P.1 | 0.000016 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | P.1 | 0.000016 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | P.1.10 | 0.000269 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | P.1.15 | 0.000232 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | P.1.4 | 0.000977 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | P.1.8 | 0.004785 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | P.2 | 0.000187 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | Q.1 | 0.000126 |
ORF8 | 69 | S69S | tcA | tcT | 1 | 1 | Q.1 | 0.000126 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | Q.3 | 0.000145 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | Q.3 | 0.000145 |
ORF8 | 69 | S69X | tCa | tGa | 1 | 1 | Q.3 | 0.000145 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | Q.4 | 0.000455 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 69 | S69S | tcA | tcG | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 69 | S69del | TCA | --- | 1 | 1 | R.1 | 0.00009 |
ORF8 | 69 | S69L | tCa | tTa | 1 | 1 | R.1 | 0.00009 |
ORF8 | 69 | S69P | Tca | Cca | 1 | 1 | R.1 | 0.00009 |
ORF8 | 69 | S69A | Tca | Gca | 1 | 1 | V.2 | 0.032258 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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