CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 64

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF864E64XnonsynGagTag1198611986128083-28085
ORF864E64DnonsyngaGgaT287628540.9923528083-28085
ORF864E64DnonsyngaGgaC2876220.0076495128083-28085
ORF864E64deldelGAG---11121112128083-28085
ORF864E64VnonsyngAggTg6076010.99011528083-28085
ORF864E64VnonsyngAGgTC60730.0049423428083-28085
ORF864E64VnonsyngAGgTT60730.0049423428083-28085
ORF864E64GnonsyngAggGg3793750.98944628083-28085
ORF864E64GnonsyngAGgGT37920.0052770528083-28085
ORF864E64GnonsyngAGgGA37920.0052770528083-28085
ORF864E64EsyngaGgaA267267128083-28085
ORF864E64AnonsyngAggCg1551420.91612928083-28085
ORF864E64AnonsyngAGgCT155100.064516128083-28085
ORF864E64AnonsyngAGgCC15530.019354828083-28085
ORF864E64KnonsynGagAag106106128083-28085
ORF864E64QnonsynGagCag5555128083-28085
ORF864E64YnonsynGaGTaT36340.94444428083-28085
ORF864E64YnonsynGaGTaC3620.055555628083-28085
ORF864E64SnonsynGAgTCg22110.528083-28085
ORF864E64SnonsynGAGTCT22100.45454528083-28085
ORF864E64SnonsynGAGTCC2210.045454528083-28085
ORF864E64del1delgaGga-1260.528083-28085
ORF864E64del1delGag-ag1260.528083-28085
ORF864E64WnonsynGAgTGg88128083-28085
ORF864E64del2delGAg--g530.628083-28085
ORF864E64del2delgAGg--510.228083-28085
ORF864E64del2delGAG--T510.228083-28085
ORF864E64LnonsynGAgTTg420.528083-28085
ORF864E64LnonsynGAgCTg410.2528083-28085
ORF864E64LnonsynGAGCTT410.2528083-28085
ORF864E64MnonsynGAgATg33128083-28085
ORF864E64FnonsynGAGTTT320.66666728083-28085
ORF864E64FnonsynGAGTTC310.33333328083-28085
ORF864E64TnonsynGAgACg310.33333328083-28085
ORF864E64TnonsynGAGACC310.33333328083-28085
ORF864E64TnonsynGAGACT310.33333328083-28085
ORF864E64PnonsynGAGCCT210.528083-28085
ORF864E64InonsynGAGATT210.528083-28085
ORF864E64NnonsynGaGAaT210.528083-28085
ORF864E64PnonsynGAgCCg210.528083-28085
ORF864E64NnonsynGaGAaC210.528083-28085
ORF864E64InonsynGAGATC210.528083-28085

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF864E64XGagTag1198611986All0.002292
ORF864E64XGagTag84158415B.1.258.170.874922
ORF864E64DgaGgaT28542876All0.000546
ORF864E64DgaGgaC222876All0.000004
ORF864E64delGAG---11121112All0.000213
ORF864E64DgaGgaT867868B.1.1.70.000776
ORF864E64DgaGgaC1868B.1.1.70.000001
ORF864E64VgAggTg601607All0.000115
ORF864E64VgAGgTC3607All0.000001
ORF864E64VgAGgTT3607All0.000001
ORF864E64XGagTag560560B.1.1600.017465
ORF864E64XGagTag386386AY.200.015002
ORF864E64GgAggGg375379All0.000072
ORF864E64GgAGgGT2379All0
ORF864E64GgAGgGA2379All0
ORF864E64VgAggTg352352B.1.1.70.000315
ORF864E64DgaGgaT296300AY.40.000461
ORF864E64DgaGgaC4300AY.40.000006
ORF864E64delGAG---289289B.1.1.70.000259
ORF864E64XGagTag270270B.1.1.70.000242
ORF864E64EgaGgaA267267All0.000051
ORF864E64XGagTag226226B.1.1.740.974138
ORF864E64XGagTag183183S.10.905941
ORF864E64DgaGgaT182182AY.250.001095
ORF864E64XGagTag181181AY.40.000282
ORF864E64DgaGgaT172175B.1.617.20.000648
ORF864E64DgaGgaC3175B.1.617.20.000011
ORF864E64XGagTag173173B.1.1770.002278
ORF864E64EgaGgaA168168B.1.1.70.00015
ORF864E64GgAggGg162162B.1.1.70.000145
ORF864E64AgAggCg142155All0.000027
ORF864E64AgAGgCT10155All0.000002
ORF864E64AgAGgCC3155All0.000001
ORF864E64DgaGgaT143144AY.430.000634
ORF864E64DgaGgaC1144AY.430.000004
ORF864E64XGagTag140140B.1.1.5170.952381
ORF864E64XGagTag126126B.1.617.20.000474
ORF864E64XGagTag118118B.10.001081
ORF864E64DgaGgaT115115AY.540.010965
ORF864E64KGagAag106106All0.00002
ORF864E64DgaGgaT8889B.1.1770.001159
ORF864E64DgaGgaC189B.1.1770.000013
ORF864E64VgAggTg8686B.1.1.2140.004769
ORF864E64DgaGgaT7777B.1.1.3480.061306
ORF864E64DgaGgaT7272B.1.5260.001692
ORF864E64delGAG---6868AY.1030.000422
ORF864E64delGAG---6868AY.40.000106
ORF864E64XGagTag6262B.1.1.4200.062374
ORF864E64DgaGgaT6161B.1.20.000537
ORF864E64delGAG---5858B.1.1.2940.073418
ORF864E64QGagCag5555All0.000011
ORF864E64VgAggTg5454AY.40.000084
ORF864E64XGagTag5353AY.430.000235
ORF864E64XGagTag5050B.1.20.00044
ORF864E64XGagTag4949AY.30.000487
ORF864E64DgaGgaT4949AY.30.000487
ORF864E64DgaGgaT4848AY.1200.001785
ORF864E64DgaGgaT4848AY.420.001931
ORF864E64delGAG---4848AY.440.000292
ORF864E64XGagTag4545B.1.177.40.009498
ORF864E64delGAG---4545B.1.3510.001338
ORF864E64XGagTag4343B.1.36.80.043
ORF864E64XGagTag4141P.10.000646
ORF864E64DgaGgaT4040P.10.00063
ORF864E64delGAG---3939AY.290.000615
ORF864E64XGagTag3939AY.440.000237
ORF864E64delGAG---3939B.1.1600.001216
ORF864E64KGagAag3838B.1.1.70.000034
ORF864E64DgaGgaT3437B.10.000311
ORF864E64DgaGgaC337B.10.000027
ORF864E64YGaGTaT3436All0.000007
ORF864E64YGaGTaC236All0
ORF864E64DgaGgaT3636AY.1030.000224
ORF864E64XGagTag3535AY.1030.000217
ORF864E64XGagTag3535AY.250.000211
ORF864E64delGAG---3535B.1.10.000635
ORF864E64DgaGgaT3434AY.440.000207
ORF864E64XGagTag3434B.1.10.000617
ORF864E64delGAG---3434B.1.1.2220.006936
ORF864E64delGAG---3333B.1.2430.002296
ORF864E64AgAggCg3131B.1.4290.000729
ORF864E64XGagTag3030B.1.1.2220.00612
ORF864E64XGagTag3030B.1.4220.02437
ORF864E64AgAggCg2929AY.440.000177
ORF864E64GgAggGg2929B.1.20.000255
ORF864E64XGagTag2828AY.60.001152
ORF864E64XGagTag2828B.1.6090.013423
ORF864E64DgaGgaT2828C.370.00325
ORF864E64XGagTag2525AY.420.001006
ORF864E64XGagTag2525B.1.1.250.014213
ORF864E64KGagAag2525B.1.1.4670.480769
ORF864E64XGagTag2424B.1.2580.001597
ORF864E64AgAggCg2323AY.40.000036
ORF864E64DgaGgaT2323B.1.10.000417
ORF864E64SGAgTCg1122All0.000002
ORF864E64SGAGTCT1022All0.000002
ORF864E64SGAGTCC122All0
ORF864E64DgaGgaT2121AY.530.006038
ORF864E64XGagTag2121C.360.019126
ORF864E64delGAG---2020P.10.000315
ORF864E64DgaGgaT1919AY.1190.000671
ORF864E64QGagCag1919AY.40.00003
ORF864E64XGagTag1919B.1.258.240.204301
ORF864E64delGAG---1818AY.1180.001128
ORF864E64XGagTag1818AY.330.001202
ORF864E64delGAG---1818B0.002301
ORF864E64delGAG---1717AY.30.000169
ORF864E64GgAggGg1717AY.330.001135
ORF864E64EgaGgaA1717AY.40.000026
ORF864E64QGagCag1717B.1.1.70.000015
ORF864E64VgAggTg1717B.1.617.20.000064
ORF864E64SGAgTCg917P.10.000142
ORF864E64SGAGTCT817P.10.000126
ORF864E64DgaGgaT1616AY.290.000252
ORF864E64GgAggGg1616AY.40.000025
ORF864E64GgAggGg1616AY.440.000097
ORF864E64XGagTag1616B.1.1.2170.058182
ORF864E64XGagTag1616B.1.1.5190.000635
ORF864E64XGagTag1616B.1.177.860.002935
ORF864E64XGagTag1515AY.1000.00069
ORF864E64XGagTag1515AY.290.000237
ORF864E64GgAggGg1515B.1.1.280.004669
ORF864E64XGagTag1515B.1.1.500.010183
ORF864E64EgaGgaA1515B.1.20.000132
ORF864E64AgAggCg1015P.10.000158
ORF864E64AgAGgCT515P.10.000079
ORF864E64YGaGTaT1414AY.4.20.000304
ORF864E64XGagTag1414B.1.6210.001239
ORF864E64XGagTag1313AY.1020.000345
ORF864E64DgaGgaT1313AY.330.000868
ORF864E64VgAggTg1313AY.99.20.001198
ORF864E64VgAggTg1313B.1.1.5190.000516
ORF864E64delGAG---1313B.1.258.170.001352
ORF864E64del1gaGga-612All0.000001
ORF864E64del1Gag-ag612All0.000001
ORF864E64QGagCag1212AY.1030.000075
ORF864E64DgaGgaT1212AY.46.50.002381
ORF864E64DgaGgaT1212AY.740.001388
ORF864E64XGagTag1212B.1.1.4060.077922
ORF864E64delGAG---1212B.1.20.000106
ORF864E64XGagTag1212B.1.360.001751
ORF864E64DgaGgaT1212B.1.360.001751
ORF864E64GgAggGg1212B.1.617.20.000045
ORF864E64DgaGgaT1111AY.1020.000292
ORF864E64DgaGgaT1111AY.390.000272
ORF864E64XGagTag1111AY.50.000227
ORF864E64EgaGgaA1111B.10.000101
ORF864E64AgAGgCT411B.1.1.280.001245
ORF864E64AgAggCg411B.1.1.280.001245
ORF864E64AgAGgCC311B.1.1.280.000934
ORF864E64delGAG---1111B.1.1.3180.003319
ORF864E64XGagTag1111P.20.002053
ORF864E64XGagTag1010AY.1010.004904
ORF864E64XGagTag1010B.1.258.40.034483
ORF864E64DgaGgaT99A.2.50.004491
ORF864E64GgAggGg99AY.240.003879
ORF864E64delGAG---99AY.250.000054
ORF864E64DgaGgaT99AY.7.20.005034
ORF864E64DgaGgaT69B.1.1.280.001867
ORF864E64VgAggTg39B.1.1.280.000934
ORF864E64DgaGgaC39B.1.1.280.000934
ORF864E64VgAGgTC39B.1.1.280.000934
ORF864E64VgAGgTT39B.1.1.280.000934
ORF864E64GgAggGg99B.1.1600.000281
ORF864E64delGAG---99B.1.617.20.000034
ORF864E64WGAgTGg88All0.000002
ORF864E64delGAG---88AY.1190.000282
ORF864E64WGAgTGg88AY.200.000311
ORF864E64XGagTag88AY.230.000558
ORF864E64XGagTag88AY.390.000198
ORF864E64delGAG---88B.1.1.2840.000859
ORF864E64AgAggCg88B.1.1.70.000007
ORF864E64delGAG---88B.1.1770.000105
ORF864E64DgaGgaT88B.1.177.820.003819
ORF864E64DgaGgaT88B.1.36.290.004139
ORF864E64XGagTag88B.1.4080.02952
ORF864E64DgaGgaT88B.1.438.10.000858
ORF864E64XGagTag88B.1.621.10.004047
ORF864E64DgaGgaT77AY.1000.000322
ORF864E64DgaGgaT77AY.1180.000439
ORF864E64DgaGgaT67AY.200.000233
ORF864E64DgaGgaC17AY.200.000039
ORF864E64DgaGgaT77AY.270.000453
ORF864E64DgaGgaT67AY.470.000187
ORF864E64DgaGgaC17AY.470.000031
ORF864E64delGAG---77AY.750.000392
ORF864E64delGAG---77AY.98.10.000339
ORF864E64delGAG---77B.1.1.2650.022082
ORF864E64delGAG---77B.1.1.5190.000278
ORF864E64XGagTag77B.1.1490.023973
ORF864E64XGagTag77B.1.2340.000924
ORF864E64delGAG---77B.1.36.160.009972
ORF864E64KGagAag77B.1.617.20.000026
ORF864E64delGAG---77B.1.6280.002467
ORF864E64XGagTag66AY.1110.001099
ORF864E64XGagTag66AY.1130.000854
ORF864E64XGagTag66AY.1140.001387
ORF864E64delGAG---66AY.260.00017
ORF864E64XGagTag66AY.260.00017
ORF864E64GgAggGg66AY.30.00006
ORF864E64XGagTag66AY.360.000889
ORF864E64XGagTag66AY.4.20.00013
ORF864E64GgAggGg66AY.430.000027
ORF864E64delGAG---66AY.590.003178
ORF864E64XGagTag66AY.9.20.00022
ORF864E64XGagTag66B0.000767
ORF864E64delGAG---66B.1.243.20.086957
ORF864E64delGAG---66P.1.140.000287
ORF864E64delGAG---66P.1.170.000971
ORF864E64DgaGgaT66Q.80.000989
ORF864E64XGagTag55A.2.50.002495
ORF864E64del2GAg--g35All0.000001
ORF864E64del2GAG--T15All0
ORF864E64del2gAGg--15All0
ORF864E64VgAggTg55AY.160.001898
ORF864E64GgAggGg55AY.260.000142
ORF864E64delGAG---55AY.29.10.001103
ORF864E64AgAggCg55AY.30.00005
ORF864E64VgAggTg55AY.390.000124
ORF864E64XGagTag55AY.450.000608
ORF864E64DgaGgaT55AY.46.60.000361
ORF864E64DgaGgaT55AY.5.10.018797
ORF864E64delGAG---55B.10.000046
ORF864E64delGAG---55B.1.1.2140.000277
ORF864E64DgaGgaT55B.1.1.5190.000199
ORF864E64XGagTag55B.1.1.5280.024038
ORF864E64VgAggTg55B.1.1570.014925
ORF864E64delGAG---55B.1.2400.001078
ORF864E64DgaGgaT55B.1.3510.000149
ORF864E64XGagTag55B.1.5250.000566
ORF864E64XGagTag55B.1.5610.001985
ORF864E64AgAggCg55B.1.617.20.000019
ORF864E64XGagTag55B.4.10.09434
ORF864E64delGAG---55C.370.00058
ORF864E64EgaGgaA55P.10.000079
ORF864E64YGaGTaT55P.10.000079
ORF864E64VgAggTg55P.10.000079
ORF864E64delGAG---55P.1.10.001588
ORF864E64LGAgTTg24All0
ORF864E64LGAGCTT14All0
ORF864E64LGAgCTg14All0
ORF864E64VgAggTg44AY.1030.000025
ORF864E64DgaGgaT44AY.140.000352
ORF864E64EgaGgaA44AY.290.000063
ORF864E64DgaGgaT44AY.34.10.00204
ORF864E64DgaGgaT44AY.39.10.000158
ORF864E64delGAG---44AY.4.20.000087
ORF864E64DgaGgaT44AY.450.000487
ORF864E64DgaGgaT44AY.46.30.003735
ORF864E64DgaGgaT44AY.50.000083
ORF864E64XGagTag44AY.590.002119
ORF864E64XGagTag44AY.7.10.000451
ORF864E64delGAG---44AY.7.20.002237
ORF864E64DgaGgaT44AY.90.00027
ORF864E64DgaGgaT44AY.980.000316
ORF864E64DgaGgaT44AY.99.20.000369
ORF864E64XGagTag44AY.99.20.000369
ORF864E64GgAggGg34B.1.10.000054
ORF864E64GgAGgGT14B.1.10.000018
ORF864E64DgaGgaT44B.1.1.2160.003562
ORF864E64XGagTag44B.1.1.280.001245
ORF864E64XGagTag44B.1.1.3260.007042
ORF864E64XGagTag44B.1.177.100.003512
ORF864E64GgAggGg44B.1.177.510.018265
ORF864E64KGagAag44B.1.20.000035
ORF864E64GgAggGg44B.1.3460.005242
ORF864E64del1Gag-ag24B.1.360.000292
ORF864E64del1gaGga-24B.1.360.000292
ORF864E64XGagTag44B.1.36.310.007005
ORF864E64XGagTag44B.1.3750.003279
ORF864E64DgaGgaT44B.1.4290.000094
ORF864E64delGAG---44B.1.4290.000094
ORF864E64XGagTag44B.1.4290.000094
ORF864E64DgaGgaT44B.1.5250.000453
ORF864E64DgaGgaT44B.1.6210.000354
ORF864E64XGagTag44C.370.000464
ORF864E64XGagTag33A.23.10.002113
ORF864E64EgaGgaA33AD.20.000657
ORF864E64DgaGgaT33AE.80.001467
ORF864E64MGAgATg33All0.000001
ORF864E64FGAGTTT23All0
ORF864E64FGAGTTC13All0
ORF864E64TGAGACT13All0
ORF864E64TGAgACg13All0
ORF864E64TGAGACC13All0
ORF864E64delGAG---33AY.1130.000427
ORF864E64DgaGgaT33AY.116.10.000934
ORF864E64VgAggTg33AY.1200.000112
ORF864E64EgaGgaA33AY.200.000117
ORF864E64DgaGgaT33AY.210.005693
ORF864E64EgaGgaA33AY.260.000085
ORF864E64EgaGgaA33AY.270.000194
ORF864E64DgaGgaT33AY.3.10.000256
ORF864E64GgAggGg33AY.390.000074
ORF864E64delGAG---33AY.390.000074
ORF864E64KGagAag33AY.430.000013
ORF864E64delGAG---33AY.430.000013
ORF864E64EgaGgaA33AY.440.000018
ORF864E64GgAggGg33AY.470.000093
ORF864E64VgAggTg33AY.470.000093
ORF864E64DgaGgaT33AY.610.000314
ORF864E64XGagTag33AY.710.001425
ORF864E64XGagTag33AY.90.000203
ORF864E64DgaGgaT33AY.9.10.000251
ORF864E64DgaGgaT33AY.9.20.00011
ORF864E64DgaGgaT33AY.98.10.000145
ORF864E64XGagTag33AY.990.003148
ORF864E64VgAggTg33B.1.10.000054
ORF864E64SGAGTCT13B.1.1.280.000311
ORF864E64SGAGTCC13B.1.1.280.000311
ORF864E64TGAgACg13B.1.1.280.000311
ORF864E64TGAGACC13B.1.1.280.000311
ORF864E64SGAgTCg13B.1.1.280.000311
ORF864E64TGAGACT13B.1.1.280.000311
ORF864E64DgaGgaT33B.1.1.3170.001235
ORF864E64XGagTag33B.1.1.370.000579
ORF864E64XGagTag33B.1.1.460.0131
ORF864E64EgaGgaA33B.1.1.500.002037
ORF864E64DgaGgaT33B.1.1110.003525
ORF864E64GgAggGg23B.1.1770.000026
ORF864E64GgAGgGA13B.1.1770.000013
ORF864E64DgaGgaT33B.1.177.160.001993
ORF864E64VgAggTg33B.1.20.000026
ORF864E64delGAG---33B.1.220.003953
ORF864E64DgaGgaT33B.1.4270.000151
ORF864E64KGagAag33B.1.4290.000071
ORF864E64delGAG---33B.1.438.10.000322
ORF864E64DgaGgaT33B.1.5030.007463
ORF864E64delGAG---33B.1.5090.002597
ORF864E64XGagTag33B.1.5580.013699
ORF864E64YGaGTaT33B.1.617.20.000011
ORF864E64KGagAag33C.370.000348
ORF864E64LGAGCTT13P.10.000016
ORF864E64LGAgCTg13P.10.000016
ORF864E64LGAgTTg13P.10.000016
ORF864E64EgaGgaA33P.1.140.000143
ORF864E64DgaGgaT33P.1.140.000143
ORF864E64delGAG---33P.1.150.000697
ORF864E64DgaGgaT33P.20.00056
ORF864E64DgaGgaT22A0.000774
ORF864E64PGAGCCT12All0
ORF864E64IGAGATC12All0
ORF864E64NGaGAaC12All0
ORF864E64NGaGAaT12All0
ORF864E64IGAGATT12All0
ORF864E64PGAgCCg12All0
ORF864E64VgAggTg22AY.1000.000092
ORF864E64delGAG---22AY.1020.000053
ORF864E64GgAggGg22AY.1030.000012
ORF864E64DgaGgaT22AY.1100.000225
ORF864E64XGagTag22AY.1160.000574
ORF864E64XGagTag22AY.1190.000071
ORF864E64GgAggGg22AY.120.000632
ORF864E64DgaGgaT22AY.120.000632
ORF864E64XGagTag22AY.1200.000074
ORF864E64GgAggGg22AY.1210.000271
ORF864E64KGagAag22AY.200.000078
ORF864E64delGAG---22AY.230.000139
ORF864E64VgAggTg22AY.250.000012
ORF864E64GgAggGg22AY.250.000012
ORF864E64DgaGgaT22AY.260.000057
ORF864E64VgAggTg22AY.270.000129
ORF864E64VgAggTg22AY.30.00002
ORF864E64DgaGgaT22AY.350.000466
ORF864E64delGAG---22AY.350.000466
ORF864E64GgAggGg22AY.380.000999
ORF864E64delGAG---22AY.39.10.000079
ORF864E64DgaGgaT22AY.4.20.000043
ORF864E64XGagTag22AY.4.2.10.000298
ORF864E64EgaGgaA22AY.430.000009
ORF864E64VgAggTg22AY.440.000012
ORF864E64delGAG---22AY.470.000062
ORF864E64delGAG---22AY.480.00093
ORF864E64XGagTag22AY.540.000191
ORF864E64DgaGgaT22AY.550.001835
ORF864E64EgaGgaA22AY.60.000082
ORF864E64DgaGgaT22AY.600.001876
ORF864E64XGagTag22AY.610.00021
ORF864E64YGaGTaT22AY.620.000871
ORF864E64GgAggGg22AY.740.000231
ORF864E64KGagAag22AY.740.000231
ORF864E64XGagTag22AY.750.000112
ORF864E64DgaGgaT22AY.750.000112
ORF864E64AgAggCg22AY.850.000854
ORF864E64GgAggGg22AY.9.20.000073
ORF864E64GgAggGg22AY.98.10.000097
ORF864E64AgAggCg22AY.99.20.000184
ORF864E64QGagCag22B.10.000018
ORF864E64XGagTag22B.1.1.100.00223
ORF864E64GgAggGg22B.1.1.1320.029851
ORF864E64XGagTag22B.1.1.1410.004024
ORF864E64DgaGgaT22B.1.1.1700.002494
ORF864E64XGagTag22B.1.1.2160.001781
ORF864E64DgaGgaT22B.1.1.2220.000408
ORF864E64EgaGgaA22B.1.1.250.001137
ORF864E64IGAGATT12B.1.1.280.000311
ORF864E64YGaGTaT12B.1.1.280.000311
ORF864E64FGAGTTC12B.1.1.280.000311
ORF864E64YGaGTaC12B.1.1.280.000311
ORF864E64IGAGATC12B.1.1.280.000311
ORF864E64FGAGTTT12B.1.1.280.000311
ORF864E64NGaGAaT12B.1.1.280.000311
ORF864E64NGaGAaC12B.1.1.280.000311
ORF864E64XGagTag22B.1.1.2910.001485
ORF864E64XGagTag22B.1.1.3060.000877
ORF864E64XGagTag22B.1.1.3150.016949
ORF864E64DgaGgaT22B.1.1.3180.000604
ORF864E64XGagTag22B.1.1.3540.008772
ORF864E64KGagAag22B.1.1.3980.006452
ORF864E64DgaGgaT22B.1.1.580.010753
ORF864E64MGAgATg22B.1.1.70.000002
ORF864E64YGaGTaT22B.1.1.70.000002
ORF864E64XGagTag22B.1.1.700.000682
ORF864E64GgAggGg22B.1.1.700.000682
ORF864E64DgaGgaT22B.1.1600.000062
ORF864E64KGagAag22B.1.1770.000026
ORF864E64DgaGgaT22B.1.177.320.002699
ORF864E64delGAG---22B.1.2100.004264
ORF864E64DgaGgaT22B.1.2210.000142
ORF864E64GgAggGg22B.1.2430.000139
ORF864E64DgaGgaC12B.1.2430.00007
ORF864E64DgaGgaT12B.1.2430.00007
ORF864E64AgAggCg22B.1.2580.000133
ORF864E64GgAggGg22B.1.3510.000059
ORF864E64DgaGgaT22B.1.351.50.001199
ORF864E64DgaGgaT22B.1.36.100.009569
ORF864E64AgAggCg22B.1.36.310.003503
ORF864E64XGagTag22B.1.3620.003082
ORF864E64DgaGgaT22B.1.4000.000858
ORF864E64delGAG---22B.1.4270.000101
ORF864E64GgAggGg22B.1.4290.000047
ORF864E64XGagTag22B.1.438.10.000215
ORF864E64DgaGgaT22B.1.4700.002809
ORF864E64KGagAag22B.1.4990.002101
ORF864E64VgAggTg22B.1.5240.002813
ORF864E64XGagTag22B.1.5260.000047
ORF864E64delGAG---22B.1.5260.000047
ORF864E64DgaGgaT22B.1.6090.000959
ORF864E64XGagTag22B.400.000729
ORF864E64AgAggCg22C.350.001548
ORF864E64DgaGgaT22C.36.30.001134
ORF864E64GgAggGg22C.370.000232
ORF864E64del1gaGga-22P.10.000032
ORF864E64GgAggGg22P.10.000032
ORF864E64PGAgCCg12P.10.000016
ORF864E64PGAGCCT12P.10.000016
ORF864E64delGAG---22P.1.120.000968
ORF864E64XGagTag22P.1.140.000096
ORF864E64GgAggGg22P.1.150.000465
ORF864E64DgaGgaT22P.1.150.000465
ORF864E64delGAG---22P.1.70.000639
ORF864E64SGAgTCg12P.20.000187
ORF864E64AgAggCg12P.20.000187
ORF864E64SGAGTCT12P.20.000187
ORF864E64AgAGgCT12P.20.000187
ORF864E64XGagTag22Q.10.000253
ORF864E64AgAggCg22R.10.00018
ORF864E64EgaGgaA110.055556
ORF864E64AgAggCg11A0.000387
ORF864E64EgaGgaA11A.23.10.000704
ORF864E64XGagTag11AD.20.000219
ORF864E64delGAG---11AE.40.043478
ORF864E64XGagTag11AE.80.000489
ORF864E64DgaGgaT11AP.10.001502
ORF864E64DgaGgaT11AU.30.00211
ORF864E64AgAggCg11AY.1000.000046
ORF864E64EgaGgaA11AY.1000.000046
ORF864E64GgAggGg11AY.1000.000046
ORF864E64VgAggTg11AY.1020.000027
ORF864E64YGaGTaT11AY.1020.000027
ORF864E64KGagAag11AY.1030.000006
ORF864E64DgaGgaT11AY.1060.000335
ORF864E64delGAG---11AY.1080.001103
ORF864E64DgaGgaT11AY.1090.00074
ORF864E64GgAggGg11AY.110.001339
ORF864E64XGagTag11AY.1100.000113
ORF864E64AgAggCg11AY.1130.000142
ORF864E64DgaGgaT11AY.1130.000142
ORF864E64XGagTag11AY.116.10.000311
ORF864E64AgAggCg11AY.1170.000085
ORF864E64DgaGgaT11AY.1170.000085
ORF864E64XGagTag11AY.1170.000085
ORF864E64XGagTag11AY.1180.000063
ORF864E64GgAggGg11AY.1190.000035
ORF864E64delGAG---11AY.120.10.000321
ORF864E64DgaGgaT11AY.120.20.001285
ORF864E64XGagTag11AY.140.000088
ORF864E64DgaGgaT11AY.160.00038
ORF864E64delGAG---11AY.200.000039
ORF864E64DgaGgaT11AY.230.00007
ORF864E64VgAggTg11AY.230.00007
ORF864E64YGaGTaT11AY.230.00007
ORF864E64DgaGgaT11AY.23.10.000417
ORF864E64XGagTag11AY.240.000431
ORF864E64QGagCag11AY.250.000006
ORF864E64YGaGTaT11AY.250.000006
ORF864E64KGagAag11AY.30.00001
ORF864E64delGAG---11AY.3.10.000085
ORF864E64GgAggGg11AY.340.000097
ORF864E64XGagTag11AY.340.000097
ORF864E64delGAG---11AY.340.000097
ORF864E64VgAggTg11AY.34.10.00051
ORF864E64DgaGgaT11AY.360.000148
ORF864E64DgaGgaT11AY.370.000316
ORF864E64QGagCag11AY.390.000025
ORF864E64XGagTag11AY.39.10.00004
ORF864E64KGagAag11AY.40.000002
ORF864E64EgaGgaA11AY.4.20.000022
ORF864E64EgaGgaA11AY.4.2.10.000149
ORF864E64DgaGgaT11AY.4.2.10.000149
ORF864E64delGAG---11AY.4.40.000409
ORF864E64DgaGgaC11AY.4.50.000107
ORF864E64DgaGgaT11AY.400.000964
ORF864E64VgAggTg11AY.430.000004
ORF864E64AgAggCg11AY.430.000004
ORF864E64AgAggCg11AY.460.000104
ORF864E64EgaGgaA11AY.460.000104
ORF864E64XGagTag11AY.46.40.000165
ORF864E64DgaGgaT11AY.46.40.000165
ORF864E64GgAggGg11AY.46.60.000072
ORF864E64AgAggCg11AY.470.000031
ORF864E64XGagTag11AY.480.000465
ORF864E64EgaGgaA11AY.480.000465
ORF864E64DgaGgaT11AY.480.000465
ORF864E64KGagAag11AY.50.000021
ORF864E64VgAggTg11AY.5.30.000337
ORF864E64XGagTag11AY.5.30.000337
ORF864E64XGagTag11AY.5.40.000277
ORF864E64EgaGgaA11AY.540.000095
ORF864E64del2GAg--g11AY.540.000095
ORF864E64DgaGgaT11AY.570.000656
ORF864E64delGAG---11AY.580.000907
ORF864E64DgaGgaT11AY.580.000907
ORF864E64KGagAag11AY.610.000105
ORF864E64DgaGgaT11AY.620.000436
ORF864E64DgaGgaT11AY.650.000533
ORF864E64XGagTag11AY.660.00107
ORF864E64XGagTag11AY.670.000464
ORF864E64KGagAag11AY.670.000464
ORF864E64DgaGgaT11AY.680.000274
ORF864E64XGagTag11AY.690.000187
ORF864E64delGAG---11AY.690.000187
ORF864E64DgaGgaT11AY.7.10.000113
ORF864E64GgAggGg11AY.710.000475
ORF864E64delGAG---11AY.740.000116
ORF864E64VgAggTg11AY.750.000056
ORF864E64XGagTag11AY.75.10.00018
ORF864E64AgAggCg11AY.75.10.00018
ORF864E64EgaGgaA11AY.820.001357
ORF864E64delGAG---11AY.840.000437
ORF864E64DgaGgaC11AY.850.000427
ORF864E64XGagTag11AY.850.000427
ORF864E64delGAG---11AY.90.000068
ORF864E64XGagTag11AY.9.10.000084
ORF864E64DgaGgaT11AY.9.2.10.001976
ORF864E64DgaGgaT11AY.910.00073
ORF864E64DgaGgaT11AY.930.000273
ORF864E64XGagTag11AY.940.000443
ORF864E64XGagTag11AY.980.000079
ORF864E64XGagTag11AY.98.10.000048
ORF864E64YGaGTaT11AY.99.20.000092
ORF864E64del1Gag-ag11B.10.000009
ORF864E64AgAggCg11B.10.000009
ORF864E64GgAggGg11B.10.000009
ORF864E64VgAggTg11B.10.000009
ORF864E64YGaGTaT11B.1.10.000018
ORF864E64KGagAag11B.1.10.000018
ORF864E64del1gaGga-11B.1.10.000018
ORF864E64XGagTag11B.1.1.10.000327
ORF864E64XGagTag11B.1.1.1610.003534
ORF864E64XGagTag11B.1.1.1710.003676
ORF864E64delGAG---11B.1.1.1740.003378
ORF864E64DgaGgaT11B.1.1.1920.002309
ORF864E64DgaGgaT11B.1.1.2140.000055
ORF864E64XGagTag11B.1.1.2140.000055
ORF864E64delGAG---11B.1.1.2160.00089
ORF864E64DgaGgaT11B.1.1.2190.005
ORF864E64DgaGgaT11B.1.1.2320.001815
ORF864E64GgAggGg11B.1.1.2340.012048
ORF864E64YGaGTaT11B.1.1.250.000569
ORF864E64delGAG---11B.1.1.250.000569
ORF864E64DgaGgaT11B.1.1.250.000569
ORF864E64KGagAag11B.1.1.2630.001558
ORF864E64delGAG---11B.1.1.2690.001353
ORF864E64XGagTag11B.1.1.2730.006757
ORF864E64GgAggGg11B.1.1.2770.000759
ORF864E64XGagTag11B.1.1.2770.000759
ORF864E64DgaGgaT11B.1.1.2770.000759
ORF864E64KGagAag11B.1.1.280.000311
ORF864E64MGAgATg11B.1.1.280.000311
ORF864E64LGAgTTg11B.1.1.280.000311
ORF864E64AgAggCg11B.1.1.2820.011628
ORF864E64AgAggCg11B.1.1.2840.000107
ORF864E64DgaGgaT11B.1.1.2840.000107
ORF864E64XGagTag11B.1.1.2940.001266
ORF864E64DgaGgaT11B.1.1.3160.000925
ORF864E64XGagTag11B.1.1.3170.000412
ORF864E64XGagTag11B.1.1.3180.000302
ORF864E64delGAG---11B.1.1.3220.008772
ORF864E64delGAG---11B.1.1.3540.004386
ORF864E64KGagAag11B.1.1.3550.015385
ORF864E64XGagTag11B.1.1.3690.000446
ORF864E64DgaGgaT11B.1.1.370.000193
ORF864E64delGAG---11B.1.1.370.000193
ORF864E64DgaGgaT11B.1.1.3720.000689
ORF864E64XGagTag11B.1.1.390.00051
ORF864E64DgaGgaT11B.1.1.4110.014706
ORF864E64DgaGgaT11B.1.1.4160.000905
ORF864E64DgaGgaT11B.1.1.4500.034483
ORF864E64DgaGgaT11B.1.1.4620.008621
ORF864E64EgaGgaA11B.1.1.5190.00004
ORF864E64delGAG---11B.1.1.630.000386
ORF864E64del2gAGg--11B.1.1.70.000001
ORF864E64EgaGgaA11B.1.1080.005814
ORF864E64GgAggGg11B.1.1110.001175
ORF864E64delGAG---11B.1.1260.001276
ORF864E64QGagCag11B.1.1390.000733
ORF864E64GgAggGg11B.1.1390.000733
ORF864E64XGagTag11B.1.1470.000756
ORF864E64KGagAag11B.1.1600.000031
ORF864E64XGagTag11B.1.160.310.008065
ORF864E64EgaGgaA11B.1.1770.000013
ORF864E64GgAggGg11B.1.177.100.000878
ORF864E64GgAggGg11B.1.177.150.000631
ORF864E64XGagTag11B.1.177.150.000631
ORF864E64GgAggGg11B.1.177.160.000664
ORF864E64delGAG---11B.1.177.170.000821
ORF864E64delGAG---11B.1.177.210.000076
ORF864E64DgaGgaT11B.1.177.350.000691
ORF864E64DgaGgaT11B.1.177.40.000211
ORF864E64GgAggGg11B.1.177.40.000211
ORF864E64XGagTag11B.1.177.420.000894
ORF864E64DgaGgaT11B.1.177.540.000606
ORF864E64DgaGgaT11B.1.177.570.000281
ORF864E64DgaGgaT11B.1.177.620.001192
ORF864E64delGAG---11B.1.177.630.002703
ORF864E64delGAG---11B.1.177.70.000165
ORF864E64EgaGgaA11B.1.177.730.000566
ORF864E64XGagTag11B.1.177.730.000566
ORF864E64DgaGgaT11B.1.177.810.000189
ORF864E64delGAG---11B.1.177.830.001481
ORF864E64DgaGgaT11B.1.177.870.000728
ORF864E64XGagTag11B.1.177.90.001332
ORF864E64delGAG---11B.1.1950.005025
ORF864E64XGagTag11B.1.214.20.0006
ORF864E64XGagTag11B.1.2210.000071
ORF864E64DgaGgaT11B.1.2400.000216
ORF864E64VgAggTg11B.1.2430.00007
ORF864E64YGaGTaC11B.1.2430.00007
ORF864E64XGagTag11B.1.2430.00007
ORF864E64EgaGgaA11B.1.2580.000067
ORF864E64GgAggGg11B.1.2580.000067
ORF864E64del2GAg--g11B.1.2580.000067
ORF864E64XGagTag11B.1.258.110.000396
ORF864E64delGAG---11B.1.258.120.007874
ORF864E64del2GAg--g11B.1.258.170.000104
ORF864E64EgaGgaA11B.1.258.30.001675
ORF864E64AgAggCg11B.1.3110.000275
ORF864E64EgaGgaA11B.1.3490.000715
ORF864E64delGAG---11B.1.350.008475
ORF864E64QGagCag11B.1.3510.00003
ORF864E64XGagTag11B.1.3510.00003
ORF864E64delGAG---11B.1.351.20.000303
ORF864E64delGAG---11B.1.360.000146
ORF864E64GgAGgGA11B.1.360.000146
ORF864E64XGagTag11B.1.36.10.00114
ORF864E64XGagTag11B.1.36.100.004785
ORF864E64GgAGgGT11B.1.36.290.000517
ORF864E64DgaGgaT11B.1.36.310.001751
ORF864E64DgaGgaT11B.1.36.80.001
ORF864E64del1Gag-ag11B.1.36.80.001
ORF864E64DgaGgaT11B.1.3610.001289
ORF864E64DgaGgaC11B.1.3690.000285
ORF864E64delGAG---11B.1.3690.000285
ORF864E64QGagCag11B.1.3690.000285
ORF864E64DgaGgaT11B.1.3750.00082
ORF864E64GgAggGg11B.1.3960.000706
ORF864E64XGagTag11B.1.4110.003704
ORF864E64VgAggTg11B.1.4270.00005
ORF864E64EgaGgaA11B.1.4290.000024
ORF864E64DgaGgaT11B.1.4360.001029
ORF864E64XGagTag11B.1.4380.006536
ORF864E64DgaGgaT11B.1.4410.009615
ORF864E64XGagTag11B.1.466.20.000391
ORF864E64del1Gag-ag11B.1.4680.005714
ORF864E64delGAG---11B.1.5170.000427
ORF864E64DgaGgaT11B.1.5210.004975
ORF864E64GgAggGg11B.1.5260.000024
ORF864E64delGAG---11B.1.5400.009709
ORF864E64EgaGgaA11B.1.5460.003704
ORF864E64delGAG---11B.1.5490.007194
ORF864E64KGagAag11B.1.5580.004566
ORF864E64XGagTag11B.1.5600.00463
ORF864E64DgaGgaT11B.1.5640.000426
ORF864E64VgAggTg11B.1.5700.002941
ORF864E64EgaGgaA11B.1.5750.000303
ORF864E64XGagTag11B.1.5790.011236
ORF864E64KGagAag11B.1.5950.000261
ORF864E64del1gaGga-11B.1.5960.000087
ORF864E64AgAggCg11B.1.5960.000087
ORF864E64DgaGgaT11B.1.5960.000087
ORF864E64delGAG---11B.1.5970.00463
ORF864E64XGagTag11B.1.5990.00365
ORF864E64DgaGgaT11B.1.617.10.000129
ORF864E64XGagTag11B.1.617.10.000129
ORF864E64GgAggGg11B.1.6200.000946
ORF864E64delGAG---11B.1.6210.000089
ORF864E64VgAggTg11B.1.621.10.000506
ORF864E64GgAggGg11B.1.6370.000073
ORF864E64delGAG---11B.340.013699
ORF864E64DgaGgaT11B.4.70.010101
ORF864E64delGAG---11B.400.000364
ORF864E64del1Gag-ag11B.400.000364
ORF864E64XGagTag11C.170.055556
ORF864E64DgaGgaT11C.2.10.006667
ORF864E64XGagTag11C.2.10.006667
ORF864E64delGAG---11C.260.007353
ORF864E64delGAG---11C.360.000911
ORF864E64DgaGgaT11C.360.000911
ORF864E64XGagTag11C.37.10.002618
ORF864E64delGAG---11M.30.076923
ORF864E64delGAG---11N.60.007092
ORF864E64del2GAG--T11P.10.000016
ORF864E64FGAGTTT11P.10.000016
ORF864E64VgAggTg11P.1.140.000048
ORF864E64GgAggGg11P.1.140.000048
ORF864E64DgaGgaT11P.1.160.000374
ORF864E64XGagTag11P.1.160.000374
ORF864E64EgaGgaA11P.1.170.000162
ORF864E64AgAggCg11P.1.170.000162
ORF864E64DgaGgaT11P.1.70.000319
ORF864E64delGAG---11P.1.80.004785
ORF864E64YGaGTaT11P.20.000187
ORF864E64VgAggTg11P.30.001595
ORF864E64XGagTag11P.40.003802
ORF864E64delGAG---11Q.30.000145
ORF864E64GgAggGg11Q.30.000145
ORF864E64delGAG---11Q.40.000455
ORF864E64XGagTag11Q.40.000455
ORF864E64delGAG---11Q.70.001111
ORF864E64VgAggTg11Q.80.000165
ORF864E64XGagTag11R.10.00009
ORF864E64delGAG---11R.10.00009
ORF864E64DgaGgaT11R.10.00009
ORF864E64VgAggTg11W.40.001351