CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 59 | E59X | nonsyn | Gaa | Taa | 1955 | 1954 | 0.999488 | 28068-28070 | |
ORF8 | 59 | E59X | nonsyn | GaA | TaG | 1955 | 1 | 0.000511509 | 28068-28070 | |
ORF8 | 59 | E59del | del | GAA | --- | 1232 | 1232 | 1 | 28068-28070 | |
ORF8 | 59 | E59D | nonsyn | gaA | gaC | 534 | 304 | 0.569288 | 28068-28070 | |
ORF8 | 59 | E59D | nonsyn | gaA | gaT | 534 | 230 | 0.430712 | 28068-28070 | |
ORF8 | 59 | E59del1 | del | Gaa | -aa | 530 | 528 | 0.996226 | 28068-28070 | |
ORF8 | 59 | E59del1 | del | gaA | ga- | 530 | 1 | 0.00188679 | 28068-28070 | |
ORF8 | 59 | E59del1 | del | gAa | g-a | 530 | 1 | 0.00188679 | 28068-28070 | |
ORF8 | 59 | E59E | syn | gaA | gaG | 208 | 208 | 1 | 28068-28070 | |
ORF8 | 59 | E59G | nonsyn | gAa | gGa | 195 | 172 | 0.882051 | 28068-28070 | |
ORF8 | 59 | E59G | nonsyn | gAA | gGG | 195 | 19 | 0.0974359 | 28068-28070 | |
ORF8 | 59 | E59G | nonsyn | gAA | gGC | 195 | 3 | 0.0153846 | 28068-28070 | |
ORF8 | 59 | E59G | nonsyn | gAA | gGT | 195 | 1 | 0.00512821 | 28068-28070 | |
ORF8 | 59 | E59K | nonsyn | Gaa | Aaa | 171 | 171 | 1 | 28068-28070 | |
ORF8 | 59 | E59Q | nonsyn | Gaa | Caa | 107 | 104 | 0.971963 | 28068-28070 | |
ORF8 | 59 | E59Q | nonsyn | GaA | CaG | 107 | 3 | 0.0280374 | 28068-28070 | |
ORF8 | 59 | E59A | nonsyn | gAa | gCa | 77 | 75 | 0.974026 | 28068-28070 | |
ORF8 | 59 | E59A | nonsyn | gAA | gCC | 77 | 2 | 0.025974 | 28068-28070 | |
ORF8 | 59 | E59V | nonsyn | gAa | gTa | 49 | 41 | 0.836735 | 28068-28070 | |
ORF8 | 59 | E59V | nonsyn | gAA | gTC | 49 | 4 | 0.0816327 | 28068-28070 | |
ORF8 | 59 | E59V | nonsyn | gAA | gTG | 49 | 3 | 0.0612245 | 28068-28070 | |
ORF8 | 59 | E59V | nonsyn | gAA | gTT | 49 | 1 | 0.0204082 | 28068-28070 | |
ORF8 | 59 | E59del2 | del | gAA | g-- | 19 | 17 | 0.894737 | 28068-28070 | |
ORF8 | 59 | E59del2 | del | GAa | --a | 19 | 2 | 0.105263 | 28068-28070 | |
ORF8 | 59 | E59R | nonsyn | GAA | CGG | 14 | 10 | 0.714286 | 28068-28070 | |
ORF8 | 59 | E59R | nonsyn | GAa | CGa | 14 | 2 | 0.142857 | 28068-28070 | |
ORF8 | 59 | E59R | nonsyn | GAA | CGC | 14 | 2 | 0.142857 | 28068-28070 | |
ORF8 | 59 | E59H | nonsyn | GaA | CaC | 8 | 7 | 0.875 | 28068-28070 | |
ORF8 | 59 | E59H | nonsyn | GaA | CaT | 8 | 1 | 0.125 | 28068-28070 | |
ORF8 | 59 | E59P | nonsyn | GAa | CCa | 5 | 3 | 0.6 | 28068-28070 | |
ORF8 | 59 | E59P | nonsyn | GAA | CCC | 5 | 2 | 0.4 | 28068-28070 | |
ORF8 | 59 | E59L | nonsyn | GAA | TTG | 4 | 1 | 0.25 | 28068-28070 | |
ORF8 | 59 | E59L | nonsyn | GAa | TTa | 4 | 1 | 0.25 | 28068-28070 | |
ORF8 | 59 | E59L | nonsyn | GAA | CTT | 4 | 1 | 0.25 | 28068-28070 | |
ORF8 | 59 | E59L | nonsyn | GAA | CTC | 4 | 1 | 0.25 | 28068-28070 | |
ORF8 | 59 | E59T | nonsyn | GAa | ACa | 1 | 1 | 1 | 28068-28070 | |
ORF8 | 59 | E59M | nonsyn | GAA | ATG | 1 | 1 | 1 | 28068-28070 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 59 | E59X | Gaa | Taa | 1954 | 1955 | All | 0.000374 |
ORF8 | 59 | E59X | GaA | TaG | 1 | 1955 | All | 0 |
ORF8 | 59 | E59del | GAA | --- | 1232 | 1232 | All | 0.000236 |
ORF8 | 59 | E59D | gaA | gaC | 304 | 534 | All | 0.000058 |
ORF8 | 59 | E59D | gaA | gaT | 230 | 534 | All | 0.000044 |
ORF8 | 59 | E59del1 | Gaa | -aa | 528 | 530 | All | 0.000101 |
ORF8 | 59 | E59del1 | gaA | ga- | 1 | 530 | All | 0 |
ORF8 | 59 | E59del1 | gAa | g-a | 1 | 530 | All | 0 |
ORF8 | 59 | E59X | Gaa | Taa | 504 | 504 | AY.4 | 0.000784 |
ORF8 | 59 | E59del1 | Gaa | -aa | 393 | 393 | B.1.1.7 | 0.000352 |
ORF8 | 59 | E59del | GAA | --- | 372 | 372 | B.1.1.7 | 0.000333 |
ORF8 | 59 | E59E | gaA | gaG | 208 | 208 | All | 0.00004 |
ORF8 | 59 | E59X | Gaa | Taa | 199 | 199 | B.1.1.7 | 0.000178 |
ORF8 | 59 | E59G | gAa | gGa | 172 | 195 | All | 0.000033 |
ORF8 | 59 | E59G | gAA | gGG | 19 | 195 | All | 0.000004 |
ORF8 | 59 | E59G | gAA | gGC | 3 | 195 | All | 0.000001 |
ORF8 | 59 | E59G | gAA | gGT | 1 | 195 | All | 0 |
ORF8 | 59 | E59K | Gaa | Aaa | 171 | 171 | All | 0.000033 |
ORF8 | 59 | E59D | gaA | gaT | 165 | 165 | AY.25 | 0.000992 |
ORF8 | 59 | E59X | Gaa | Taa | 156 | 156 | B.1.177.86 | 0.028619 |
ORF8 | 59 | E59X | Gaa | Taa | 149 | 149 | B.1.1.37 | 0.028737 |
ORF8 | 59 | E59Q | Gaa | Caa | 104 | 107 | All | 0.00002 |
ORF8 | 59 | E59Q | GaA | CaG | 3 | 107 | All | 0.000001 |
ORF8 | 59 | E59D | gaA | gaC | 70 | 98 | AY.4 | 0.000109 |
ORF8 | 59 | E59D | gaA | gaT | 28 | 98 | AY.4 | 0.000044 |
ORF8 | 59 | E59del | GAA | --- | 86 | 86 | AY.44 | 0.000523 |
ORF8 | 59 | E59X | Gaa | Taa | 82 | 82 | B.1 | 0.000751 |
ORF8 | 59 | E59X | Gaa | Taa | 80 | 80 | AY.29 | 0.001262 |
ORF8 | 59 | E59G | gAa | gGa | 77 | 80 | B.1.1.7 | 0.000069 |
ORF8 | 59 | E59G | gAA | gGG | 3 | 80 | B.1.1.7 | 0.000003 |
ORF8 | 59 | E59A | gAa | gCa | 75 | 77 | All | 0.000014 |
ORF8 | 59 | E59A | gAA | gCC | 2 | 77 | All | 0 |
ORF8 | 59 | E59del1 | Gaa | -aa | 71 | 71 | AY.25 | 0.000427 |
ORF8 | 59 | E59D | gaA | gaC | 69 | 69 | AY.46.4 | 0.011351 |
ORF8 | 59 | E59del | GAA | --- | 68 | 68 | AY.4 | 0.000106 |
ORF8 | 59 | E59del | GAA | --- | 66 | 66 | AY.103 | 0.00041 |
ORF8 | 59 | E59D | gaA | gaC | 60 | 60 | AY.102 | 0.001591 |
ORF8 | 59 | E59X | Gaa | Taa | 59 | 59 | AY.9.2 | 0.002167 |
ORF8 | 59 | E59del | GAA | --- | 58 | 58 | B.1.1.294 | 0.073418 |
ORF8 | 59 | E59X | Gaa | Taa | 54 | 54 | B.1.1 | 0.00098 |
ORF8 | 59 | E59Q | Gaa | Caa | 50 | 50 | AY.44 | 0.000304 |
ORF8 | 59 | E59V | gAa | gTa | 41 | 49 | All | 0.000008 |
ORF8 | 59 | E59V | gAA | gTC | 4 | 49 | All | 0.000001 |
ORF8 | 59 | E59V | gAA | gTG | 3 | 49 | All | 0.000001 |
ORF8 | 59 | E59V | gAA | gTT | 1 | 49 | All | 0 |
ORF8 | 59 | E59del | GAA | --- | 45 | 45 | B.1.351 | 0.001338 |
ORF8 | 59 | E59X | Gaa | Taa | 45 | 45 | B.1.617.2 | 0.000169 |
ORF8 | 59 | E59X | Gaa | Taa | 39 | 39 | B.1.1.519 | 0.001549 |
ORF8 | 59 | E59K | Gaa | Aaa | 39 | 39 | B.1.1.7 | 0.000035 |
ORF8 | 59 | E59del | GAA | --- | 38 | 38 | AY.29 | 0.000599 |
ORF8 | 59 | E59X | Gaa | Taa | 38 | 38 | AY.44 | 0.000231 |
ORF8 | 59 | E59del | GAA | --- | 37 | 37 | B.1.1 | 0.000671 |
ORF8 | 59 | E59del | GAA | --- | 34 | 34 | B.1.1.222 | 0.006936 |
ORF8 | 59 | E59del | GAA | --- | 34 | 34 | B.1.243 | 0.002366 |
ORF8 | 59 | E59X | Gaa | Taa | 34 | 34 | B.1.289 | 0.090426 |
ORF8 | 59 | E59K | Gaa | Aaa | 32 | 32 | AY.4 | 0.00005 |
ORF8 | 59 | E59X | Gaa | Taa | 31 | 31 | B.1.1.352 | 0.96875 |
ORF8 | 59 | E59del1 | Gaa | -aa | 30 | 30 | AY.44 | 0.000183 |
ORF8 | 59 | E59E | gaA | gaG | 30 | 30 | B.1.1.317 | 0.012351 |
ORF8 | 59 | E59del | GAA | --- | 30 | 30 | B.1.160 | 0.000936 |
ORF8 | 59 | E59X | Gaa | Taa | 28 | 28 | AY.103 | 0.000174 |
ORF8 | 59 | E59X | Gaa | Taa | 28 | 28 | AY.43 | 0.000124 |
ORF8 | 59 | E59D | gaA | gaC | 14 | 28 | B.1.1.7 | 0.000013 |
ORF8 | 59 | E59D | gaA | gaT | 14 | 28 | B.1.1.7 | 0.000013 |
ORF8 | 59 | E59X | Gaa | Taa | 28 | 28 | B.1.170 | 0.12069 |
ORF8 | 59 | E59E | gaA | gaG | 27 | 27 | B.1.1.7 | 0.000024 |
ORF8 | 59 | E59K | Gaa | Aaa | 24 | 24 | B.1.1.50 | 0.016293 |
ORF8 | 59 | E59X | Gaa | Taa | 22 | 22 | AY.9.1 | 0.001842 |
ORF8 | 59 | E59K | Gaa | Aaa | 21 | 21 | AY.25 | 0.000126 |
ORF8 | 59 | E59del | GAA | --- | 21 | 21 | P.1 | 0.000331 |
ORF8 | 59 | E59K | Gaa | Aaa | 20 | 20 | AY.103 | 0.000124 |
ORF8 | 59 | E59X | Gaa | Taa | 20 | 20 | B.1.1.337 | 0.071942 |
ORF8 | 59 | E59X | Gaa | Taa | 20 | 20 | B.1.160 | 0.000624 |
ORF8 | 59 | E59del2 | gAA | g-- | 17 | 19 | All | 0.000003 |
ORF8 | 59 | E59del2 | GAa | --a | 2 | 19 | All | 0 |
ORF8 | 59 | E59del | GAA | --- | 19 | 19 | B | 0.002428 |
ORF8 | 59 | E59del | GAA | --- | 18 | 18 | AY.118 | 0.001128 |
ORF8 | 59 | E59X | Gaa | Taa | 18 | 18 | B.1.1.447 | 0.642857 |
ORF8 | 59 | E59del | GAA | --- | 17 | 17 | AY.3 | 0.000169 |
ORF8 | 59 | E59E | gaA | gaG | 17 | 17 | AY.43 | 0.000075 |
ORF8 | 59 | E59del | GAA | --- | 17 | 17 | B.1.617.2 | 0.000064 |
ORF8 | 59 | E59D | gaA | gaC | 15 | 17 | P.1 | 0.000236 |
ORF8 | 59 | E59D | gaA | gaT | 2 | 17 | P.1 | 0.000032 |
ORF8 | 59 | E59E | gaA | gaG | 16 | 16 | B.1.177 | 0.000211 |
ORF8 | 59 | E59R | GAA | CGG | 10 | 14 | All | 0.000002 |
ORF8 | 59 | E59R | GAa | CGa | 2 | 14 | All | 0 |
ORF8 | 59 | E59R | GAA | CGC | 2 | 14 | All | 0 |
ORF8 | 59 | E59del2 | gAA | g-- | 14 | 14 | B.1.1.7 | 0.000013 |
ORF8 | 59 | E59D | gaA | gaC | 11 | 14 | B.1.617.2 | 0.000041 |
ORF8 | 59 | E59D | gaA | gaT | 3 | 14 | B.1.617.2 | 0.000011 |
ORF8 | 59 | E59X | Gaa | Taa | 14 | 14 | N.5 | 0.024735 |
ORF8 | 59 | E59D | gaA | gaC | 12 | 13 | AY.3 | 0.000119 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 13 | AY.3 | 0.00001 |
ORF8 | 59 | E59X | Gaa | Taa | 13 | 13 | B.1.1.222 | 0.002652 |
ORF8 | 59 | E59G | gAa | gGa | 13 | 13 | B.1.617.2 | 0.000049 |
ORF8 | 59 | E59E | gaA | gaG | 13 | 13 | B.1.617.2 | 0.000049 |
ORF8 | 59 | E59G | gAA | gGG | 12 | 12 | AY.94 | 0.005312 |
ORF8 | 59 | E59del1 | Gaa | -aa | 12 | 12 | B.1.2 | 0.000106 |
ORF8 | 59 | E59del | GAA | --- | 12 | 12 | B.1.2 | 0.000106 |
ORF8 | 59 | E59X | Gaa | Taa | 11 | 11 | AY.25 | 0.000066 |
ORF8 | 59 | E59G | gAa | gGa | 11 | 11 | B.1 | 0.000101 |
ORF8 | 59 | E59del | GAA | --- | 11 | 11 | B.1.1.318 | 0.003319 |
ORF8 | 59 | E59X | Gaa | Taa | 11 | 11 | B.1.621.1 | 0.005564 |
ORF8 | 59 | E59X | Gaa | Taa | 11 | 11 | P.1 | 0.000173 |
ORF8 | 59 | E59G | gAa | gGa | 10 | 10 | AY.23 | 0.000697 |
ORF8 | 59 | E59G | gAa | gGa | 10 | 10 | B.1.1 | 0.000181 |
ORF8 | 59 | E59V | gAa | gTa | 10 | 10 | B.1.1.7 | 0.000009 |
ORF8 | 59 | E59A | gAa | gCa | 10 | 10 | B.1.2 | 0.000088 |
ORF8 | 59 | E59E | gaA | gaG | 9 | 9 | AY.102 | 0.000239 |
ORF8 | 59 | E59del | GAA | --- | 9 | 9 | AY.113 | 0.001282 |
ORF8 | 59 | E59X | Gaa | Taa | 9 | 9 | AY.121 | 0.001218 |
ORF8 | 59 | E59A | gAa | gCa | 9 | 9 | AY.4 | 0.000014 |
ORF8 | 59 | E59del | GAA | --- | 9 | 9 | B.1.177 | 0.000119 |
ORF8 | 59 | E59X | Gaa | Taa | 9 | 9 | B.1.517 | 0.003843 |
ORF8 | 59 | E59H | GaA | CaC | 7 | 8 | All | 0.000001 |
ORF8 | 59 | E59H | GaA | CaT | 1 | 8 | All | 0 |
ORF8 | 59 | E59G | gAa | gGa | 8 | 8 | AY.120 | 0.000297 |
ORF8 | 59 | E59X | Gaa | Taa | 8 | 8 | AY.98.1 | 0.000387 |
ORF8 | 59 | E59D | gaA | gaC | 7 | 8 | B.1 | 0.000064 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 8 | B.1 | 0.000009 |
ORF8 | 59 | E59del | GAA | --- | 8 | 8 | B.1.1.284 | 0.000859 |
ORF8 | 59 | E59Q | Gaa | Caa | 6 | 8 | P.1 | 0.000095 |
ORF8 | 59 | E59Q | GaA | CaG | 2 | 8 | P.1 | 0.000032 |
ORF8 | 59 | E59A | gAa | gCa | 8 | 8 | P.1.14 | 0.000382 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | AY.119 | 0.000247 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | AY.25 | 0.000042 |
ORF8 | 59 | E59E | gaA | gaG | 7 | 7 | AY.4 | 0.000011 |
ORF8 | 59 | E59A | gAa | gCa | 7 | 7 | AY.9.2 | 0.000257 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | B.1 | 0.000064 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF8 | 59 | E59X | Gaa | Taa | 7 | 7 | B.1.1.63 | 0.002701 |
ORF8 | 59 | E59Q | Gaa | Caa | 7 | 7 | B.1.1.7 | 0.000006 |
ORF8 | 59 | E59X | Gaa | Taa | 7 | 7 | B.1.2 | 0.000062 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | B.1.36.16 | 0.009972 |
ORF8 | 59 | E59E | gaA | gaG | 7 | 7 | B.1.427 | 0.000353 |
ORF8 | 59 | E59X | Gaa | Taa | 7 | 7 | B.1.466.2 | 0.002739 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | B.1.628 | 0.002467 |
ORF8 | 59 | E59E | gaA | gaG | 7 | 7 | P.1 | 0.00011 |
ORF8 | 59 | E59H | GaA | CaC | 6 | 7 | P.1 | 0.000095 |
ORF8 | 59 | E59H | GaA | CaT | 1 | 7 | P.1 | 0.000016 |
ORF8 | 59 | E59del | GAA | --- | 7 | 7 | P.1.14 | 0.000335 |
ORF8 | 59 | E59del | GAA | --- | 6 | 6 | 0.333333 | |
ORF8 | 59 | E59X | Gaa | Taa | 6 | 6 | AY.116 | 0.001721 |
ORF8 | 59 | E59del1 | Gaa | -aa | 6 | 6 | AY.20 | 0.000233 |
ORF8 | 59 | E59G | gAa | gGa | 6 | 6 | AY.4 | 0.000009 |
ORF8 | 59 | E59E | gaA | gaG | 6 | 6 | B.1.1.141 | 0.012072 |
ORF8 | 59 | E59del | GAA | --- | 6 | 6 | B.1.1.519 | 0.000238 |
ORF8 | 59 | E59E | gaA | gaG | 6 | 6 | B.1.236 | 0.01232 |
ORF8 | 59 | E59del | GAA | --- | 6 | 6 | B.1.243.2 | 0.086957 |
ORF8 | 59 | E59del | GAA | --- | 6 | 6 | P.1.17 | 0.000971 |
ORF8 | 59 | E59P | GAa | CCa | 3 | 5 | All | 0.000001 |
ORF8 | 59 | E59P | GAA | CCC | 2 | 5 | All | 0 |
ORF8 | 59 | E59A | gAa | gCa | 5 | 5 | AY.103 | 0.000031 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | AY.119 | 0.000177 |
ORF8 | 59 | E59del | GAA | --- | 5 | 5 | AY.29.1 | 0.001103 |
ORF8 | 59 | E59del | GAA | --- | 5 | 5 | AY.39 | 0.000124 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | AY.47 | 0.000156 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | AY.53 | 0.001438 |
ORF8 | 59 | E59E | gaA | gaG | 5 | 5 | AY.59 | 0.002648 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | AY.98 | 0.000395 |
ORF8 | 59 | E59D | gaA | gaC | 4 | 5 | B.1.1 | 0.000073 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 5 | B.1.1 | 0.000018 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | B.1.1.312 | 0.00956 |
ORF8 | 59 | E59D | gaA | gaC | 5 | 5 | B.1.1.519 | 0.000199 |
ORF8 | 59 | E59D | gaA | gaT | 4 | 5 | B.1.177 | 0.000053 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 5 | B.1.177 | 0.000013 |
ORF8 | 59 | E59del | GAA | --- | 5 | 5 | B.1.240 | 0.001078 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | B.1.526 | 0.000118 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | B.1.595 | 0.001305 |
ORF8 | 59 | E59del | GAA | --- | 5 | 5 | C.37 | 0.00058 |
ORF8 | 59 | E59X | Gaa | Taa | 5 | 5 | C.37 | 0.00058 |
ORF8 | 59 | E59G | gAA | gGC | 2 | 5 | P.1 | 0.000032 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 5 | P.1 | 0.000032 |
ORF8 | 59 | E59R | GAA | CGC | 2 | 5 | P.1 | 0.000032 |
ORF8 | 59 | E59R | GAa | CGa | 2 | 5 | P.1 | 0.000032 |
ORF8 | 59 | E59G | gAA | gGG | 1 | 5 | P.1 | 0.000016 |
ORF8 | 59 | E59R | GAA | CGG | 1 | 5 | P.1 | 0.000016 |
ORF8 | 59 | E59del | GAA | --- | 5 | 5 | P.1.1 | 0.001588 |
ORF8 | 59 | E59L | GAA | CTT | 1 | 4 | All | 0 |
ORF8 | 59 | E59L | GAA | CTC | 1 | 4 | All | 0 |
ORF8 | 59 | E59L | GAa | TTa | 1 | 4 | All | 0 |
ORF8 | 59 | E59L | GAA | TTG | 1 | 4 | All | 0 |
ORF8 | 59 | E59D | gaA | gaC | 4 | 4 | AY.120 | 0.000149 |
ORF8 | 59 | E59E | gaA | gaG | 4 | 4 | AY.20 | 0.000155 |
ORF8 | 59 | E59X | Gaa | Taa | 4 | 4 | AY.23 | 0.000279 |
ORF8 | 59 | E59G | gAa | gGa | 4 | 4 | AY.3 | 0.00004 |
ORF8 | 59 | E59V | gAA | gTC | 2 | 4 | AY.3 | 0.00002 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 4 | AY.3 | 0.00002 |
ORF8 | 59 | E59X | Gaa | Taa | 4 | 4 | AY.3.1 | 0.000341 |
ORF8 | 59 | E59X | Gaa | Taa | 4 | 4 | AY.33 | 0.000267 |
ORF8 | 59 | E59D | gaA | gaC | 4 | 4 | AY.39.1 | 0.000158 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | AY.4.2 | 0.000087 |
ORF8 | 59 | E59V | gAa | gTa | 3 | 4 | AY.43 | 0.000013 |
ORF8 | 59 | E59G | gAa | gGa | 3 | 4 | AY.43 | 0.000013 |
ORF8 | 59 | E59G | gAA | gGC | 1 | 4 | AY.43 | 0.000004 |
ORF8 | 59 | E59V | gAA | gTG | 1 | 4 | AY.43 | 0.000004 |
ORF8 | 59 | E59X | Gaa | Taa | 4 | 4 | AY.46 | 0.000416 |
ORF8 | 59 | E59E | gaA | gaG | 4 | 4 | AY.46.6 | 0.000289 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | AY.7.2 | 0.002237 |
ORF8 | 59 | E59A | gAa | gCa | 4 | 4 | AY.75 | 0.000224 |
ORF8 | 59 | E59A | gAa | gCa | 4 | 4 | AZ.2 | 0.003284 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | B.1.1.214 | 0.000222 |
ORF8 | 59 | E59Q | Gaa | Caa | 4 | 4 | B.1.1.219 | 0.02 |
ORF8 | 59 | E59R | GAA | CGG | 4 | 4 | B.1.1.7 | 0.000004 |
ORF8 | 59 | E59E | gaA | gaG | 4 | 4 | B.1.160 | 0.000125 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | B.1.177.80 | 0.007648 |
ORF8 | 59 | E59E | gaA | gaG | 4 | 4 | B.1.177.81 | 0.000757 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | B.1.258 | 0.000266 |
ORF8 | 59 | E59del | GAA | --- | 4 | 4 | B.1.429 | 0.000094 |
ORF8 | 59 | E59X | Gaa | Taa | 4 | 4 | B.1.525 | 0.000453 |
ORF8 | 59 | E59del1 | Gaa | -aa | 4 | 4 | B.1.617.2 | 0.000015 |
ORF8 | 59 | E59K | Gaa | Aaa | 4 | 4 | D.2 | 0.0003 |
ORF8 | 59 | E59del1 | Gaa | -aa | 4 | 4 | Q.8 | 0.00066 |
ORF8 | 59 | E59D | gaA | gaC | 3 | 3 | AY.103 | 0.000019 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | AY.111 | 0.000549 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | AY.117 | 0.000254 |
ORF8 | 59 | E59Q | Gaa | Caa | 3 | 3 | AY.117 | 0.000254 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | AY.26 | 0.000085 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | AY.3 | 0.00003 |
ORF8 | 59 | E59K | Gaa | Aaa | 3 | 3 | AY.3 | 0.00003 |
ORF8 | 59 | E59G | gAa | gGa | 3 | 3 | AY.39 | 0.000074 |
ORF8 | 59 | E59D | gaA | gaC | 2 | 3 | AY.39 | 0.000049 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 3 | AY.39 | 0.000025 |
ORF8 | 59 | E59Q | Gaa | Caa | 3 | 3 | AY.4 | 0.000005 |
ORF8 | 59 | E59D | gaA | gaC | 2 | 3 | AY.4.2 | 0.000043 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 3 | AY.4.2 | 0.000022 |
ORF8 | 59 | E59G | gAa | gGa | 3 | 3 | AY.61 | 0.000314 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | AY.75 | 0.000168 |
ORF8 | 59 | E59D | gaA | gaT | 3 | 3 | AY.85 | 0.001282 |
ORF8 | 59 | E59E | gaA | gaG | 3 | 3 | AY.98 | 0.000237 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | AZ.3 | 0.004559 |
ORF8 | 59 | E59E | gaA | gaG | 3 | 3 | B.1 | 0.000027 |
ORF8 | 59 | E59E | gaA | gaG | 3 | 3 | B.1.1 | 0.000054 |
ORF8 | 59 | E59K | Gaa | Aaa | 3 | 3 | B.1.1 | 0.000054 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | B.1.1.214 | 0.000166 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | B.1.1.291 | 0.002227 |
ORF8 | 59 | E59Q | Gaa | Caa | 3 | 3 | B.1.1.407 | 0.125 |
ORF8 | 59 | E59A | gAa | gCa | 3 | 3 | B.1.1.7 | 0.000003 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | B.1.177 | 0.00004 |
ORF8 | 59 | E59E | gaA | gaG | 3 | 3 | B.1.214.2 | 0.001799 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | B.1.22 | 0.003953 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | B.1.243 | 0.000209 |
ORF8 | 59 | E59V | gAa | gTa | 3 | 3 | B.1.258.21 | 0.023256 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | B.1.438.1 | 0.000322 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | B.1.509 | 0.002597 |
ORF8 | 59 | E59G | gAa | gGa | 3 | 3 | B.1.526 | 0.000071 |
ORF8 | 59 | E59A | gAa | gCa | 3 | 3 | B.1.526 | 0.000071 |
ORF8 | 59 | E59Q | Gaa | Caa | 3 | 3 | B.1.617.2 | 0.000011 |
ORF8 | 59 | E59A | gAa | gCa | 3 | 3 | B.1.617.2 | 0.000011 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | B.1.9.5 | 0.017045 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | P.1.15 | 0.000697 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | P.1.7 | 0.000958 |
ORF8 | 59 | E59X | Gaa | Taa | 3 | 3 | P.2 | 0.00056 |
ORF8 | 59 | E59del | GAA | --- | 3 | 3 | Q.8 | 0.000495 |
ORF8 | 59 | E59D | gaA | gaC | 2 | 2 | 0.111111 | |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | A | 0.000774 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | AY.1 | 0.000791 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.100 | 0.000092 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.102 | 0.000053 |
ORF8 | 59 | E59Q | Gaa | Caa | 2 | 2 | AY.102 | 0.000053 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.102 | 0.000053 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.106 | 0.00067 |
ORF8 | 59 | E59L | GAa | TTa | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59V | gAA | gTG | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59L | GAA | TTG | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59X | GaA | TaG | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 2 | AY.113 | 0.000142 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | AY.116 | 0.000574 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | AY.13 | 0.000322 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.19 | 0.002281 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | AY.23 | 0.000139 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.23 | 0.000139 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | AY.25 | 0.000012 |
ORF8 | 59 | E59Q | Gaa | Caa | 2 | 2 | AY.25 | 0.000012 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 2 | AY.25 | 0.000012 |
ORF8 | 59 | E59A | gAa | gCa | 2 | 2 | AY.25 | 0.000012 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | AY.26 | 0.000057 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | AY.29 | 0.000032 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.39 | 0.000049 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.39.1 | 0.000079 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 2 | AY.4 | 0.000003 |
ORF8 | 59 | E59A | gAa | gCa | 2 | 2 | AY.4.2 | 0.000043 |
ORF8 | 59 | E59A | gAa | gCa | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 59 | E59D | gaA | gaC | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 59 | E59R | GAA | CGG | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 59 | E59A | gAa | gCa | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | AY.44 | 0.000012 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 2 | AY.44 | 0.000006 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 2 | AY.44 | 0.000006 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.45 | 0.000243 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.47 | 0.000062 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.48 | 0.00093 |
ORF8 | 59 | E59G | gAa | gGa | 2 | 2 | AY.6 | 0.000082 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.61 | 0.00021 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.65 | 0.001066 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.84 | 0.000875 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AY.92 | 0.000575 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | AY.98.1 | 0.000097 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | AZ.1 | 0.001735 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B | 0.000256 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | B.1 | 0.000018 |
ORF8 | 59 | E59V | gAa | gTa | 2 | 2 | B.1 | 0.000018 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.1.216 | 0.001781 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | B.1.1.25 | 0.001137 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.1.326 | 0.003521 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.1.409 | 0.005666 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.1.50 | 0.001358 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.177.43 | 0.002954 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | B.1.2 | 0.000018 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.210 | 0.004264 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.210 | 0.004264 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.234 | 0.000264 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.258 | 0.000133 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.258.17 | 0.000208 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.351 | 0.000059 |
ORF8 | 59 | E59Q | GaA | CaG | 1 | 2 | B.1.351 | 0.00003 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 2 | B.1.351 | 0.00003 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | B.1.36.8 | 0.002 |
ORF8 | 59 | E59Q | Gaa | Caa | 2 | 2 | B.1.375 | 0.001639 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF8 | 59 | E59D | gaA | gaC | 2 | 2 | B.1.497 | 0.00063 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.609 | 0.000959 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.617.1 | 0.000258 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.1.621 | 0.000177 |
ORF8 | 59 | E59del2 | GAa | --a | 2 | 2 | B.1.637 | 0.000146 |
ORF8 | 59 | E59E | gaA | gaG | 2 | 2 | B.1.9.5 | 0.011364 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | B.40 | 0.000729 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | B.6 | 0.00182 |
ORF8 | 59 | E59X | Gaa | Taa | 2 | 2 | C.36 | 0.001821 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | C.37 | 0.000232 |
ORF8 | 59 | E59K | Gaa | Aaa | 2 | 2 | P.1 | 0.000032 |
ORF8 | 59 | E59L | GAA | CTT | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59L | GAA | CTC | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59V | gAA | gTC | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59V | gAA | gTT | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59A | gAA | gCC | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59P | GAA | CCC | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59P | GAa | CCa | 1 | 2 | P.1 | 0.000016 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF8 | 59 | E59del | GAA | --- | 2 | 2 | P.1.7 | 0.000639 |
ORF8 | 59 | E59A | gAA | gCC | 1 | 2 | P.2 | 0.000187 |
ORF8 | 59 | E59P | GAa | CCa | 1 | 2 | P.2 | 0.000187 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 2 | P.2 | 0.000187 |
ORF8 | 59 | E59P | GAA | CCC | 1 | 2 | P.2 | 0.000187 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | A | 0.000387 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | A.1 | 0.000282 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | A.2.5 | 0.000499 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AD.2 | 0.000219 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AE.4 | 0.043478 |
ORF8 | 59 | E59T | GAa | ACa | 1 | 1 | All | 0 |
ORF8 | 59 | E59M | GAA | ATG | 1 | 1 | All | 0 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | AT.1 | 0.005128 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | AY.1 | 0.000396 |
ORF8 | 59 | E59del2 | gAA | g-- | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.110 | 0.000113 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.111 | 0.000183 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.113 | 0.000142 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.116 | 0.000287 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.118 | 0.000063 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.120 | 0.000037 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | AY.120 | 0.000037 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.120.1 | 0.000321 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.16 | 0.00038 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.16 | 0.00038 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.16.1 | 0.00047 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.23 | 0.00007 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.23 | 0.00007 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.27 | 0.000065 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.28 | 0.00189 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.29 | 0.000016 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.29.1 | 0.000221 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | AY.3 | 0.00001 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 1 | AY.32 | 0.000532 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.32 | 0.000532 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | AY.33 | 0.000067 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.36 | 0.000148 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.38 | 0.000499 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.39.1 | 0.00004 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.4.4 | 0.000409 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.4.4 | 0.000409 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.41 | 0.000294 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.42 | 0.00004 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 59 | E59R | GAA | CGG | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 59 | E59G | gAA | gGG | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 59 | E59M | GAA | ATG | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 59 | E59del2 | gAA | g-- | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.46 | 0.000104 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.46.1 | 0.001027 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.46.2 | 0.000635 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.46.6 | 0.000072 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.48 | 0.000465 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.5 | 0.000021 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.5 | 0.000021 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.5.4 | 0.000277 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.54 | 0.000095 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.6 | 0.000041 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.6 | 0.000041 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.61 | 0.000105 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | AY.62 | 0.000436 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | AY.65 | 0.000533 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 59 | E59G | gAA | gGT | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.69 | 0.000187 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.7.1 | 0.000113 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | AY.70 | 0.000209 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.70 | 0.000209 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.74 | 0.000116 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.85 | 0.000427 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | AY.9.2 | 0.000037 |
ORF8 | 59 | E59V | gAA | gTC | 1 | 1 | AY.9.2 | 0.000037 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | AY.9.2 | 0.000037 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | AY.90 | 0.000684 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | AY.93 | 0.000273 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | AY.98.1 | 0.000048 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | AZ.2 | 0.000821 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | B | 0.000128 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B | 0.000128 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1 | 0.000009 |
ORF8 | 59 | E59del1 | gAa | g-a | 1 | 1 | B.1 | 0.000009 |
ORF8 | 59 | E59del1 | gaA | ga- | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | B.1.1.1 | 0.000327 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.189 | 0.001513 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | B.1.1.198 | 0.001468 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.205 | 0.003717 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.269 | 0.001353 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.28 | 0.000311 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 1 | B.1.1.282 | 0.011628 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.286 | 0.002899 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | B.1.1.294 | 0.001266 |
ORF8 | 59 | E59G | gAA | gGG | 1 | 1 | B.1.1.294 | 0.001266 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.297 | 0.002237 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.322 | 0.008772 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.33 | 0.000421 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | B.1.1.339 | 0.010526 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.37 | 0.000193 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | B.1.1.409 | 0.002833 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.433 | 0.001425 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.484 | 0.1 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.52 | 0.012195 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.1.526 | 0.003546 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.1.63 | 0.000386 |
ORF8 | 59 | E59P | GAa | CCa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 59 | E59T | GAa | ACa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.111 | 0.001175 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.126 | 0.001276 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | B.1.160 | 0.000031 |
ORF8 | 59 | E59R | GAA | CGG | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 59 | E59R | GAA | CGG | 1 | 1 | B.1.177.15 | 0.000631 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.177.17 | 0.000821 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | B.1.177.44 | 0.000519 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF8 | 59 | E59V | gAA | gTG | 1 | 1 | B.1.177.63 | 0.002703 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.177.73 | 0.000566 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | B.1.177.86 | 0.000183 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 59 | E59A | gAa | gCa | 1 | 1 | B.1.243 | 0.00007 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.258.12 | 0.007874 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | B.1.258.17 | 0.000104 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.258.7 | 0.001912 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B.1.311 | 0.000275 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.340 | 0.004292 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.35 | 0.008475 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.36 | 0.000146 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.36.17 | 0.000494 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | B.1.366 | 0.004878 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | B.1.369 | 0.000285 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.369 | 0.000285 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.369 | 0.000285 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B.1.370 | 0.008 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.411 | 0.003704 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.428 | 0.00102 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | B.1.429 | 0.000024 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.429 | 0.000024 |
ORF8 | 59 | E59G | gAA | gGG | 1 | 1 | B.1.445 | 0.011765 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.446 | 0.02 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.453 | 0.003236 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.480 | 0.002488 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.499 | 0.00105 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.503 | 0.002488 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.509 | 0.000866 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.524 | 0.001406 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | B.1.538 | 0.008065 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.540 | 0.009709 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.549 | 0.007194 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.560 | 0.00463 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.561 | 0.000397 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.564 | 0.000426 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.580 | 0.004065 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.582 | 0.000491 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 59 | E59D | gaA | gaT | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.597 | 0.00463 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | B.1.621 | 0.000089 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.1.625 | 0.002353 |
ORF8 | 59 | E59V | gAa | gTa | 1 | 1 | B.23 | 0.002924 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | B.34 | 0.013699 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | B.6.6 | 0.000889 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | C.26 | 0.007353 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | C.36 | 0.000911 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | C.37 | 0.000116 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | D.2 | 0.000075 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | M.3 | 0.076923 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | N.6 | 0.007092 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | P.1 | 0.000016 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | P.1.1 | 0.000318 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | P.1.14 | 0.000048 |
ORF8 | 59 | E59K | Gaa | Aaa | 1 | 1 | P.1.15 | 0.000232 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | P.1.2 | 0.001156 |
ORF8 | 59 | E59del1 | Gaa | -aa | 1 | 1 | P.1.7 | 0.000319 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | P.1.8 | 0.004785 |
ORF8 | 59 | E59Q | Gaa | Caa | 1 | 1 | P.2 | 0.000187 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | P.2 | 0.000187 |
ORF8 | 59 | E59H | GaA | CaC | 1 | 1 | P.2 | 0.000187 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | Q.1 | 0.000126 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | Q.2 | 0.000613 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | Q.3 | 0.000145 |
ORF8 | 59 | E59X | Gaa | Taa | 1 | 1 | Q.4 | 0.000455 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | Q.4 | 0.000455 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | Q.4 | 0.000455 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | Q.7 | 0.001111 |
ORF8 | 59 | E59G | gAa | gGa | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 59 | E59E | gaA | gaG | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 59 | E59D | gaA | gaC | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 59 | E59del2 | gAA | g-- | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 59 | E59del | GAA | --- | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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