CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 55

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF855A55VnonsyngCagTa359235730.9947128056-28058
ORF855A55VnonsyngCAgTG3592100.0027839628056-28058
ORF855A55VnonsyngCAgTC359280.0022271728056-28058
ORF855A55VnonsyngCAgTT359210.00027839628056-28058
ORF855A55TnonsynGcaAca101610150.99901628056-28058
ORF855A55TnonsynGcAAcG101610.00098425228056-28058
ORF855A55deldelGCA---944944128056-28058
ORF855A55SnonsynGcaTca251251128056-28058
ORF855A55AsyngcAgcG92640.69565228056-28058
ORF855A55AsyngcAgcC92160.17391328056-28058
ORF855A55AsyngcAgcT92120.13043528056-28058
ORF855A55EnonsyngCagAa61600.98360728056-28058
ORF855A55EnonsyngCAgAG6110.016393428056-28058
ORF855A55del2delgCAg--3232128056-28058
ORF855A55GnonsyngCagGa32300.937528056-28058
ORF855A55GnonsyngCAgGT3210.0312528056-28058
ORF855A55GnonsyngCAgGG3210.0312528056-28058
ORF855A55PnonsynGcaCca1270.58333328056-28058
ORF855A55PnonsynGcACcG1230.2528056-28058
ORF855A55PnonsynGcACcC1220.16666728056-28058
ORF855A55del1delgcAgc-630.528056-28058
ORF855A55del1delgCag-a620.33333328056-28058
ORF855A55del1delGca-ca610.16666728056-28058
ORF855A55LnonsynGCACTG520.428056-28058
ORF855A55LnonsynGCACTC520.428056-28058
ORF855A55LnonsynGCaTTa510.228056-28058
ORF855A55XnonsynGCaTGa11128056-28058
ORF855A55KnonsynGCaAAa11128056-28058
ORF855A55MnonsynGCAATG11128056-28058
ORF855A55InonsynGCaATa11128056-28058

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF855A55VgCagTa35733592All0.000683
ORF855A55VgCAgTG103592All0.000002
ORF855A55VgCAgTC83592All0.000002
ORF855A55VgCAgTT13592All0
ORF855A55TGcaAca10151016All0.000194
ORF855A55TGcAAcG11016All0
ORF855A55delGCA---944944All0.000181
ORF855A55VgCagTa725725B.1.1.70.000649
ORF855A55VgCagTa590590B.1.617.20.002222
ORF855A55TGcaAca469469B.1.1.70.00042
ORF855A55VgCagTa318320AY.430.001409
ORF855A55VgCAgTC2320AY.430.000009
ORF855A55SGcaTca251251All0.000048
ORF855A55VgCagTa239239AY.40.000372
ORF855A55VgCagTa220220AY.290.00347
ORF855A55VgCagTa213214AY.440.001296
ORF855A55VgCAgTC1214AY.440.000006
ORF855A55delGCA---199199B.1.1.70.000178
ORF855A55TGcaAca168168B.1.1.580.903226
ORF855A55TGcaAca163163B.1.1770.002146
ORF855A55SGcaTca149149B.1.1.1570.136073
ORF855A55VgCagTa133133AY.1030.000826
ORF855A55delGCA---9898AY.40.000153
ORF855A55AgcAgcG6492All0.000012
ORF855A55AgcAgcC1692All0.000003
ORF855A55AgcAgcT1292All0.000002
ORF855A55VgCagTa9191AY.1000.004187
ORF855A55VgCagTa6173P.10.000961
ORF855A55VgCAgTG873P.10.000126
ORF855A55VgCAgTC473P.10.000063
ORF855A55VgCagTa6262B.1.1.370.011958
ORF855A55EgCagAa6061All0.000011
ORF855A55EgCAgAG161All0
ORF855A55delGCA---6060AY.1030.000373
ORF855A55VgCagTa6060AY.250.000361
ORF855A55delGCA---5959B.1.1.2940.074684
ORF855A55VgCagTa5658B.10.000513
ORF855A55VgCAgTT158B.10.000009
ORF855A55VgCAgTG158B.10.000009
ORF855A55delGCA---4545B.1.3510.001338
ORF855A55SGcaTca3939P.1.20.045087
ORF855A55delGCA---3838AY.290.000599
ORF855A55VgCagTa3838B.1.1770.0005
ORF855A55VgCagTa3838B.1.20.000335
ORF855A55VgCagTa3535B.1.4290.000824
ORF855A55delGCA---3434B.1.10.000617
ORF855A55delGCA---3434B.1.2430.002366
ORF855A55delGCA---3333B.1.1.2220.006732
ORF855A55del2gCAg--3232All0.000006
ORF855A55GgCagGa3032All0.000006
ORF855A55GgCAgGT132All0
ORF855A55GgCAgGG132All0
ORF855A55delGCA---3232B.1.1600.000998
ORF855A55VgCagTa3030B.1.1390.021994
ORF855A55VgCagTa2929B.1.10.000526
ORF855A55VgCagTa2626AY.30.000259
ORF855A55VgCagTa2525AY.50.000516
ORF855A55delGCA---2323AY.440.00014
ORF855A55VgCagTa2323B.1.1.1700.028678
ORF855A55GgCagGa2222B.1.1.70.00002
ORF855A55TGcaAca1919B.10.000174
ORF855A55EgCagAa1818AY.940.007968
ORF855A55delGCA---1818B0.002301
ORF855A55VgCagTa1818B.1.3510.000535
ORF855A55VgCagTa1818B.1.6060.108434
ORF855A55VgCagTa1818C.370.002089
ORF855A55VgCagTa1717AY.1180.001065
ORF855A55delGCA---1616AY.30.000159
ORF855A55VgCagTa1515AY.390.000371
ORF855A55SGcaTca1515B.1.1.70.000013
ORF855A55AgcAgcG1315B.1.1.70.000012
ORF855A55AgcAgcT215B.1.1.70.000002
ORF855A55VgCagTa1515B.1.177.810.00284
ORF855A55TGcaAca1414AY.40.000022
ORF855A55TGcaAca1414AY.440.000085
ORF855A55delGCA---1414P.10.000221
ORF855A55AgcAgcG914P.10.000142
ORF855A55AgcAgcC414P.10.000063
ORF855A55AgcAgcT114P.10.000016
ORF855A55VgCagTa1313AY.4.20.000282
ORF855A55VgCagTa1313B.1.5260.000306
ORF855A55VgCagTa1313B.1.6210.001151
ORF855A55PGcaCca712All0.000001
ORF855A55PGcACcG312All0.000001
ORF855A55PGcACcC212All0
ORF855A55VgCagTa1212AY.1020.000318
ORF855A55VgCagTa1212B.1.1600.000374
ORF855A55TGcaAca1111AY.1020.000292
ORF855A55VgCagTa1111AY.16.10.005169
ORF855A55delGCA---1111AY.270.000712
ORF855A55VgCagTa1111AY.860.009129
ORF855A55delGCA---1111B.1.1.3180.003319
ORF855A55TGcaAca1111B.1.617.20.000041
ORF855A55del2gCAg--1010P.10.000158
ORF855A55delGCA---99AY.1180.000564
ORF855A55TGcaAca99AY.5.30.003036
ORF855A55VgCagTa99B.1.1.3180.002716
ORF855A55delGCA---99B.1.20.000079
ORF855A55TGcaAca99B.1.2580.000599
ORF855A55VgCagTa88AY.230.000558
ORF855A55TGcaAca88AY.430.000035
ORF855A55delGCA---88B.1.1.2840.000859
ORF855A55TGcaAca88B.1.1.5190.000318
ORF855A55VgCagTa88B.1.177.500.037559
ORF855A55delGCA---88B.1.617.20.00003
ORF855A55AgcAgcT88C.80.035714
ORF855A55TGcaAca77A.210.019391
ORF855A55TGcaAca77AY.1030.000043
ORF855A55SGcaTca77AY.250.000042
ORF855A55VgCagTa77AY.260.000198
ORF855A55EgCagAa77AY.40.000011
ORF855A55AgcAgcG67AY.40.000009
ORF855A55AgcAgcC17AY.40.000002
ORF855A55delGCA---77AY.4.20.000152
ORF855A55VgCagTa77AY.450.000852
ORF855A55VgCagTa77AY.46.40.001152
ORF855A55TGcaAca77B.1.10.000127
ORF855A55delGCA---77B.1.1.2650.022082
ORF855A55VgCagTa77B.1.1.4320.008861
ORF855A55VgCagTa77B.1.2430.000487
ORF855A55AgcAgcG77B.1.3160.777778
ORF855A55delGCA---77B.1.36.160.009972
ORF855A55delGCA---77B.1.6280.002467
ORF855A55VgCagTa77C.36.30.003971
ORF855A55delGCA---77P.1.140.000335
ORF855A55del1gcAgc-36All0.000001
ORF855A55del1gCag-a26All0
ORF855A55del1Gca-ca16All0
ORF855A55delGCA---66AY.1190.000212
ORF855A55VgCagTa66AY.60.000247
ORF855A55delGCA---66B.1.1770.000079
ORF855A55TGcaAca66B.1.20.000053
ORF855A55delGCA---66B.1.243.20.086957
ORF855A55VgCagTa66B.1.3780.041096
ORF855A55VgCagTa66B.1.4430.028037
ORF855A55VgCagTa66B.1.5250.000679
ORF855A55EgCagAa66B.1.5260.000141
ORF855A55SGcaTca66B.1.617.20.000023
ORF855A55delGCA---66P.1.170.000971
ORF855A55LGCACTG25All0
ORF855A55LGCACTC25All0
ORF855A55LGCaTTa15All0
ORF855A55VgCagTa55AY.1190.000177
ORF855A55delGCA---55AY.250.00003
ORF855A55delGCA---55AY.29.10.001103
ORF855A55VgCagTa55AY.3.10.000426
ORF855A55TGcaAca55AY.380.002496
ORF855A55VgCagTa55AY.380.002496
ORF855A55SGcaTca55AY.440.00003
ORF855A55AgcAgcG55AY.460.00052
ORF855A55VgCagTa55AY.470.000156
ORF855A55VgCagTa55AY.520.004072
ORF855A55VgCagTa55AY.90.000338
ORF855A55delGCA---55B.10.000046
ORF855A55delGCA---55B.1.1.5190.000199
ORF855A55EgCagAa55B.1.1.70.000004
ORF855A55VgCagTa55B.1.2210.000355
ORF855A55delGCA---55B.1.2400.001078
ORF855A55VgCagTa55B.1.6370.000365
ORF855A55SGcaTca55P.10.000079
ORF855A55TGcaAca45P.10.000063
ORF855A55TGcAAcG15P.10.000016
ORF855A55delGCA---55P.1.10.001588
ORF855A55VgCagTa55Q.80.000825
ORF855A55del2gCAg--44AY.1030.000025
ORF855A55VgCagTa44AY.1170.000338
ORF855A55VgCagTa44AY.1200.000149
ORF855A55VgCagTa44AY.120.20.005141
ORF855A55TGcaAca44AY.30.00004
ORF855A55EgCagAa44AY.30.00004
ORF855A55VgCagTa44AY.330.000267
ORF855A55SGcaTca44AY.40.000006
ORF855A55VgCagTa44AY.420.000161
ORF855A55del2gCAg--44AY.440.000024
ORF855A55TGcaAca44AY.46.40.000658
ORF855A55delGCA---44AY.60.000165
ORF855A55delGCA---44AY.7.20.002237
ORF855A55VgCagTa44AY.790.004843
ORF855A55VgCagTa44AY.920.001149
ORF855A55VgCagTa44AY.98.10.000194
ORF855A55VgCagTa44AY.99.20.000369
ORF855A55TGcaAca44B.1.1.1590.018692
ORF855A55VgCagTa44B.1.1.1860.013746
ORF855A55delGCA---44B.1.1.2140.000222
ORF855A55VgCagTa44B.1.1.5190.000159
ORF855A55PGcaCca44B.1.1.70.000004
ORF855A55VgCagTa44B.1.1.890.024242
ORF855A55VgCagTa44B.1.177.720.013559
ORF855A55VgCagTa44B.1.2340.000528
ORF855A55VgCagTa44B.1.2580.000266
ORF855A55delGCA---44B.1.4290.000094
ORF855A55TGcaAca44B.1.5090.003463
ORF855A55SGcaTca44B.1.5870.00759
ORF855A55VgCagTa44B.1.6090.001918
ORF855A55AgcAgcG34B.1.617.20.000011
ORF855A55AgcAgcC14B.1.617.20.000004
ORF855A55LGCACTC24P.10.000032
ORF855A55PGcACcC24P.10.000032
ORF855A55LGCACTG24P.10.000032
ORF855A55PGcACcG24P.10.000032
ORF855A55VgCagTa33AY.100.00159
ORF855A55VgCagTa33AY.1160.00086
ORF855A55del2gCAg--33AY.1180.000188
ORF855A55PGcaCca33AY.260.000085
ORF855A55delGCA---33AY.260.000085
ORF855A55VgCagTa33AY.46.60.000217
ORF855A55TGcaAca33AY.50.000062
ORF855A55VgCagTa33AY.530.000863
ORF855A55VgCagTa33AY.610.000314
ORF855A55VgCagTa33AY.980.000237
ORF855A55VgCagTa33B.1.1.2220.000612
ORF855A55AgcAgcG33B.1.1.5190.000119
ORF855A55del2gCAg--33B.1.1.70.000003
ORF855A55AgcAgcC33B.1.1600.000094
ORF855A55VgCagTa33B.1.177.600.000655
ORF855A55delGCA---33B.1.220.003953
ORF855A55VgCagTa33B.1.2400.000647
ORF855A55TGcaAca33B.1.258.170.000312
ORF855A55TGcaAca33B.1.3240.004815
ORF855A55GgCagGa33B.1.3620.004622
ORF855A55VgCagTa33B.1.4270.000151
ORF855A55TGcaAca33B.1.4290.000071
ORF855A55AgcAgcC33B.1.438.10.000322
ORF855A55VgCagTa33B.1.4700.004213
ORF855A55delGCA---33B.1.5090.002597
ORF855A55delGCA---33B.1.5260.000071
ORF855A55EgCagAa33B.1.617.20.000011
ORF855A55VgCagTa33B.1.6190.002613
ORF855A55TGcaAca33C.370.000348
ORF855A55EgCagAa23P.10.000032
ORF855A55EgCAgAG13P.10.000016
ORF855A55delGCA---33P.1.150.000697
ORF855A55AgcAgcG33Q.30.000435
ORF855A55TGcaAca220.111111
ORF855A55AgcAgcC12A.2.40.003367
ORF855A55AgcAgcG12A.2.40.003367
ORF855A55VgCagTa22A.2.50.000998
ORF855A55VgCagTa22A.2.5.30.020619
ORF855A55VgCagTa22AY.1100.000225
ORF855A55EgCagAa22AY.1190.000071
ORF855A55EgCagAa22AY.200.000078
ORF855A55TGcaAca22AY.230.000139
ORF855A55VgCagTa22AY.360.000296
ORF855A55delGCA---22AY.39.10.000079
ORF855A55VgCagTa22AY.460.000208
ORF855A55VgCagTa22AY.46.30.001867
ORF855A55TGcaAca22AY.46.60.000144
ORF855A55delGCA---22AY.480.00093
ORF855A55AgcAgcG22AY.610.00021
ORF855A55VgCagTa22AY.620.000871
ORF855A55TGcaAca22AY.670.000929
ORF855A55VgCagTa22AY.70.000392
ORF855A55TGcaAca22AY.750.000112
ORF855A55delGCA---22AY.840.000875
ORF855A55VgCagTa22AY.9.20.000073
ORF855A55VgCagTa22B0.000256
ORF855A55GgCAgGT12B.10.000009
ORF855A55AgcAgcT12B.10.000009
ORF855A55GgCAgGG12B.10.000009
ORF855A55AgcAgcG12B.10.000009
ORF855A55VgCagTa22B.1.1.10.000653
ORF855A55VgCagTa22B.1.1.2140.000111
ORF855A55VgCagTa22B.1.1.280.000622
ORF855A55VgCagTa22B.1.1.3260.003521
ORF855A55VgCagTa22B.1.1.330.000842
ORF855A55VgCagTa22B.1.1.3370.007194
ORF855A55VgCagTa22B.1.1.3510.005587
ORF855A55VgCagTa22B.1.1.3680.006173
ORF855A55VgCagTa22B.1.1.5260.007092
ORF855A55VgCagTa22B.1.1.700.000682
ORF855A55TGcaAca22B.1.1600.000062
ORF855A55del1gCag-a22B.1.1770.000026
ORF855A55del2gCAg--22B.1.1770.000026
ORF855A55EgCagAa22B.1.177.620.002384
ORF855A55VgCagTa22B.1.1950.01005
ORF855A55SGcaTca22B.1.20.000018
ORF855A55AgcAgcG12B.1.20.000009
ORF855A55AgcAgcC12B.1.20.000009
ORF855A55VgCagTa22B.1.2100.004264
ORF855A55delGCA---22B.1.2100.004264
ORF855A55VgCagTa22B.1.2410.001623
ORF855A55delGCA---22B.1.258.170.000208
ORF855A55TGcaAca22B.1.3510.000059
ORF855A55TGcaAca22B.1.360.000292
ORF855A55delGCA---22B.1.360.000292
ORF855A55VgCagTa22B.1.360.000292
ORF855A55EgCagAa22B.1.36.290.001035
ORF855A55VgCagTa22B.1.3690.00057
ORF855A55delGCA---22B.1.4270.000101
ORF855A55TGcaAca22B.1.466.10.014388
ORF855A55VgCagTa22B.1.5960.000174
ORF855A55delGCA---22B.1.6370.000146
ORF855A55delGCA---22B.400.000729
ORF855A55VgCagTa22P.1.140.000096
ORF855A55VgCAgTG12P.1.170.000162
ORF855A55VgCagTa12P.1.170.000162
ORF855A55VgCAgTC12P.20.000187
ORF855A55VgCagTa12P.20.000187
ORF855A55VgCagTa22Q.30.00029
ORF855A55TGcaAca22Q.70.002222
ORF855A55VgCagTa11AA.10.007246
ORF855A55TGcaAca11AA.20.007692
ORF855A55delGCA---11AE.40.043478
ORF855A55SGcaTca11AE.80.000489
ORF855A55KGCaAAa11All0
ORF855A55IGCaATa11All0
ORF855A55MGCAATG11All0
ORF855A55XGCaTGa11All0
ORF855A55VgCagTa11AY.10.000396
ORF855A55TGcaAca11AY.1000.000046
ORF855A55delGCA---11AY.1020.000027
ORF855A55SGcaTca11AY.1020.000027
ORF855A55del2gCAg--11AY.1020.000027
ORF855A55delGCA---11AY.1080.001103
ORF855A55VgCagTa11AY.1080.001103
ORF855A55TGcaAca11AY.1100.000113
ORF855A55TGcaAca11AY.1170.000085
ORF855A55TGcaAca11AY.1180.000063
ORF855A55VgCagTa11AY.120.2.10.000498
ORF855A55VgCagTa11AY.1210.000135
ORF855A55EgCagAa11AY.1210.000135
ORF855A55VgCagTa11AY.190.00114
ORF855A55VgCagTa11AY.200.000039
ORF855A55SGcaTca11AY.230.00007
ORF855A55delGCA---11AY.230.00007
ORF855A55EgCagAa11AY.230.00007
ORF855A55TGcaAca11AY.23.10.000417
ORF855A55EgCagAa11AY.240.000431
ORF855A55VgCagTa11AY.240.000431
ORF855A55del2gCAg--11AY.250.000006
ORF855A55TGcaAca11AY.250.000006
ORF855A55AgcAgcG11AY.260.000028
ORF855A55SGcaTca11AY.260.000028
ORF855A55TGcaAca11AY.260.000028
ORF855A55VgCagTa11AY.29.10.000221
ORF855A55del2gCAg--11AY.30.00001
ORF855A55XGCaTGa11AY.30.00001
ORF855A55GgCagGa11AY.30.00001
ORF855A55VgCagTa11AY.300.000396
ORF855A55del2gCAg--11AY.340.000097
ORF855A55VgCagTa11AY.350.000233
ORF855A55TGcaAca11AY.390.000025
ORF855A55delGCA---11AY.390.000025
ORF855A55VgCagTa11AY.39.10.00004
ORF855A55VgCagTa11AY.4.2.10.000149
ORF855A55VgCagTa11AY.4.30.000842
ORF855A55delGCA---11AY.4.40.000409
ORF855A55VgCagTa11AY.4.50.000107
ORF855A55VgCagTa11AY.400.000964
ORF855A55del2gCAg--11AY.430.000004
ORF855A55SGcaTca11AY.430.000004
ORF855A55delGCA---11AY.430.000004
ORF855A55LGCaTTa11AY.440.000006
ORF855A55AgcAgcG11AY.440.000006
ORF855A55GgCagGa11AY.440.000006
ORF855A55EgCagAa11AY.50.000021
ORF855A55SGcaTca11AY.5.30.000337
ORF855A55VgCagTa11AY.5.30.000337
ORF855A55VgCagTa11AY.510.000909
ORF855A55SGcaTca11AY.520.000814
ORF855A55TGcaAca11AY.530.000288
ORF855A55delGCA---11AY.540.000095
ORF855A55VgCagTa11AY.540.000095
ORF855A55VgCagTa11AY.550.000917
ORF855A55delGCA---11AY.690.000187
ORF855A55TGcaAca11AY.70.000196
ORF855A55VgCagTa11AY.700.000209
ORF855A55delGCA---11AY.740.000116
ORF855A55VgCagTa11AY.740.000116
ORF855A55VgCagTa11AY.780.001541
ORF855A55VgCagTa11AY.800.001129
ORF855A55VgCagTa11AY.840.000437
ORF855A55VgCagTa11AY.850.000427
ORF855A55delGCA---11AY.90.000068
ORF855A55VgCagTa11AY.9.10.000084
ORF855A55TGcaAca11AY.9.20.000037
ORF855A55delGCA---11AY.9.20.000037
ORF855A55VgCagTa11AY.950.000761
ORF855A55delGCA---11AY.98.10.000048
ORF855A55SGcaTca11AY.98.10.000048
ORF855A55del2gCAg--11AY.98.10.000048
ORF855A55del1Gca-ca11AZ.20.000821
ORF855A55EgCagAa11B.10.000009
ORF855A55SGcaTca11B.1.10.000018
ORF855A55PGcACcG11B.1.10.000018
ORF855A55VgCagTa11B.1.1.100.001115
ORF855A55VgCagTa11B.1.1.1210.002427
ORF855A55TGcaAca11B.1.1.1570.000913
ORF855A55delGCA---11B.1.1.1740.003378
ORF855A55VgCagTa11B.1.1.1920.002309
ORF855A55VgCagTa11B.1.1.2070.001182
ORF855A55delGCA---11B.1.1.2160.00089
ORF855A55VgCagTa11B.1.1.2160.00089
ORF855A55AgcAgcG11B.1.1.250.000569
ORF855A55delGCA---11B.1.1.250.000569
ORF855A55delGCA---11B.1.1.2690.001353
ORF855A55AgcAgcG11B.1.1.280.000311
ORF855A55VgCagTa11B.1.1.2840.000107
ORF855A55delGCA---11B.1.1.2970.002237
ORF855A55TGcaAca11B.1.1.3040.002809
ORF855A55VgCagTa11B.1.1.3060.000438
ORF855A55VgCagTa11B.1.1.3120.001912
ORF855A55TGcaAca11B.1.1.3180.000302
ORF855A55delGCA---11B.1.1.3220.008772
ORF855A55delGCA---11B.1.1.3540.004386
ORF855A55delGCA---11B.1.1.370.000193
ORF855A55VgCagTa11B.1.1.4670.019231
ORF855A55TGcaAca11B.1.1.4850.016667
ORF855A55VgCagTa11B.1.1.530.013699
ORF855A55delGCA---11B.1.1.630.000386
ORF855A55KGCaAAa11B.1.1.70.000001
ORF855A55del1gcAgc-11B.1.1.70.000001
ORF855A55delGCA---11B.1.1260.001276
ORF855A55VgCagTa11B.1.1460.004237
ORF855A55VgCagTa11B.1.160.110.005714
ORF855A55TGcaAca11B.1.160.260.002421
ORF855A55EgCagAa11B.1.1770.000013
ORF855A55TGcaAca11B.1.177.110.001698
ORF855A55VgCagTa11B.1.177.110.001698
ORF855A55delGCA---11B.1.177.120.000152
ORF855A55VgCagTa11B.1.177.160.000664
ORF855A55VgCagTa11B.1.177.170.000821
ORF855A55VgCagTa11B.1.177.210.000076
ORF855A55VgCagTa11B.1.177.40.000211
ORF855A55VgCagTa11B.1.177.50.001242
ORF855A55VgCagTa11B.1.177.510.004566
ORF855A55delGCA---11B.1.177.630.002703
ORF855A55delGCA---11B.1.177.70.000165
ORF855A55VgCagTa11B.1.177.70.000165
ORF855A55TGcaAca11B.1.177.730.000566
ORF855A55delGCA---11B.1.177.830.001481
ORF855A55TGcaAca11B.1.177.860.000183
ORF855A55VgCagTa11B.1.177.860.000183
ORF855A55delGCA---11B.1.1950.005025
ORF855A55del1gcAgc-11B.1.2340.000132
ORF855A55SGcaTca11B.1.2400.000216
ORF855A55AgcAgcG11B.1.2430.00007
ORF855A55delGCA---11B.1.2580.000067
ORF855A55VgCagTa11B.1.258.110.000396
ORF855A55delGCA---11B.1.258.120.007874
ORF855A55VgCagTa11B.1.258.170.000104
ORF855A55VgCagTa11B.1.258.220.002667
ORF855A55delGCA---11B.1.258.90.005
ORF855A55VgCagTa11B.1.2650.001271
ORF855A55TGcaAca11B.1.3110.000275
ORF855A55AgcAgcG11B.1.3200.001245
ORF855A55VgCagTa11B.1.3250.006897
ORF855A55VgCagTa11B.1.3490.000715
ORF855A55del1gcAgc-11B.1.350.008475
ORF855A55SGcaTca11B.1.3510.00003
ORF855A55delGCA---11B.1.351.20.000303
ORF855A55VgCagTa11B.1.36.210.00216
ORF855A55VgCagTa11B.1.3660.004878
ORF855A55VgCagTa11B.1.3890.001002
ORF855A55VgCagTa11B.1.3970.004854
ORF855A55VgCagTa11B.1.4040.001302
ORF855A55TGcaAca11B.1.4270.00005
ORF855A55SGcaTca11B.1.4290.000024
ORF855A55VgCagTa11B.1.4380.006536
ORF855A55delGCA---11B.1.4450.011765
ORF855A55VgCagTa11B.1.4650.003802
ORF855A55VgCagTa11B.1.466.10.007194
ORF855A55VgCagTa11B.1.466.20.000391
ORF855A55delGCA---11B.1.4680.005714
ORF855A55VgCagTa11B.1.4990.00105
ORF855A55SGcaTca11B.1.5260.000024
ORF855A55AgcAgcG11B.1.5260.000024
ORF855A55TGcaAca11B.1.5260.000024
ORF855A55VgCagTa11B.1.5380.008065
ORF855A55delGCA---11B.1.5400.009709
ORF855A55delGCA---11B.1.5490.007194
ORF855A55VgCagTa11B.1.5510.00129
ORF855A55VgCagTa11B.1.5610.000397
ORF855A55delGCA---11B.1.5640.000426
ORF855A55VgCagTa11B.1.5770.000687
ORF855A55GgCagGa11B.1.5880.00091
ORF855A55delGCA---11B.1.5970.00463
ORF855A55AgcAgcC11B.1.6200.000946
ORF855A55delGCA---11B.1.6210.000089
ORF855A55TGcaAca11B.1.621.10.000506
ORF855A55GgCagGa11B.1.6270.00202
ORF855A55AgcAgcG11B.1.9.50.005682
ORF855A55delGCA---11B.340.013699
ORF855A55SGcaTca11B.580.010204
ORF855A55AgcAgcG11B.6.60.000889
ORF855A55VgCagTa11C.160.00106
ORF855A55VgCagTa11C.170.055556
ORF855A55VgCagTa11C.180.002591
ORF855A55delGCA---11C.260.007353
ORF855A55AgcAgcG11C.350.000774
ORF855A55SGcaTca11C.350.000774
ORF855A55delGCA---11C.370.000116
ORF855A55VgCagTa11C.37.10.002618
ORF855A55VgCagTa11C.380.008065
ORF855A55VgCagTa11D.20.000075
ORF855A55VgCagTa11L.20.011364
ORF855A55delGCA---11M.30.076923
ORF855A55VgCagTa11N.40.004255
ORF855A55delGCA---11N.60.007092
ORF855A55MGCAATG11P.10.000016
ORF855A55IGCaATa11P.10.000016
ORF855A55GgCagGa11P.10.000016
ORF855A55VgCagTa11P.1.120.000484
ORF855A55delGCA---11P.1.120.000484
ORF855A55EgCagAa11P.1.140.000048
ORF855A55VgCagTa11P.1.160.000374
ORF855A55VgCagTa11P.1.70.000319
ORF855A55delGCA---11P.1.70.000319
ORF855A55AgcAgcC11P.20.000187
ORF855A55TGcaAca11Q.80.000165
ORF855A55delGCA---11R.10.00009
ORF855A55VgCagTa11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.