CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 51 & Codon = Act

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF851A51TnonsynGctAct4724710.99788128044-28046

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF851A51TGctAct471472All0.00009
ORF851A51TGctAct274274AY.440.001668
ORF851A51TGctAct5858P.1.100.015629
ORF851A51TGctAct4242B.1.617.20.000158
ORF851A51TGctAct1717AY.1100.001916
ORF851A51TGctAct1313B.1.20.000114
ORF851A51TGctAct1010AY.750.00056
ORF851A51TGctAct88B.1.4270.000404
ORF851A51TGctAct66B.1.1.70.000005
ORF851A51TGctAct44AY.40.000006
ORF851A51TGctAct44B.1.10.000073
ORF851A51TGctAct44B.1.258.170.000416
ORF851A51TGctAct33AY.250.000018
ORF851A51TGctAct33AY.60.000123
ORF851A51TGctAct22AY.1030.000012
ORF851A51TGctAct22AY.1170.000169
ORF851A51TGctAct22AY.430.000009
ORF851A51TGctAct22B.1.1.100.00223
ORF851A51TGctAct22P.10.000032
ORF851A51TGctAct11AY.130.000161
ORF851A51TGctAct11AY.200.000039
ORF851A51TGctAct11AY.230.00007
ORF851A51TGctAct11AY.340.000097
ORF851A51TGctAct11AY.390.000025
ORF851A51TGctAct11AY.980.000079
ORF851A51TGctAct11B.10.000009
ORF851A51TGctAct11B.1.1.2650.003155
ORF851A51TGctAct11B.1.1.3060.000438
ORF851A51TGctAct11B.1.1390.000733
ORF851A51TGctAct11B.1.177.870.000728
ORF851A51TGctAct11B.1.1890.004292
ORF851A51TGctAct11B.1.360.000146
ORF851A51TGctAct11B.1.4290.000024
ORF851A51TGctAct11B.1.5380.008065

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.