CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 51

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF8	51	A51S		nonsyn	Gct	Tct	15707	15691	0.998981	28044-28046
ORF8	51	A51S		nonsyn	GcT	TcC	15707	10	0.000636659	28044-28046
ORF8	51	A51S		nonsyn	GcT	TcA	15707	5	0.000318329	28044-28046
ORF8	51	A51S		nonsyn	GcT	TcG	15707	1	0.0000636659	28044-28046
ORF8	51	A51V		nonsyn	gCt	gTt	8568	8568	1	28044-28046
ORF8	51	A51del		del	GCT	---	953	953	1	28044-28046
ORF8	51	A51T		nonsyn	Gct	Act	472	471	0.997881	28044-28046
ORF8	51	A51T		nonsyn	GcT	AcC	472	1	0.00211864	28044-28046
ORF8	51	A51A		syn	gcT	gcC	287	275	0.958188	28044-28046
ORF8	51	A51A		syn	gcT	gcA	287	10	0.0348432	28044-28046
ORF8	51	A51A		syn	gcT	gcG	287	2	0.00696864	28044-28046
ORF8	51	A51D		nonsyn	gCt	gAt	143	143	1	28044-28046
ORF8	51	A51F		nonsyn	GCt	TTt	13	13	1	28044-28046
ORF8	51	A51G		nonsyn	gCt	gGt	10	9	0.9	28044-28046
ORF8	51	A51del1		del	gcT	gc-	10	6	0.6	28044-28046
ORF8	51	A51del1		del	Gct	-ct	10	4	0.4	28044-28046
ORF8	51	A51G		nonsyn	gCT	gGC	10	1	0.1	28044-28046
ORF8	51	A51del2		del	GCt	--t	5	2	0.4	28044-28046
ORF8	51	A51del2		del	gCT	g--	5	2	0.4	28044-28046
ORF8	51	A51del2		del	GCT	--N	5	1	0.2	28044-28046
ORF8	51	A51P		nonsyn	Gct	Cct	4	2	0.5	28044-28046
ORF8	51	A51P		nonsyn	GcT	CcA	4	2	0.5	28044-28046
ORF8	51	A51L		nonsyn	GCt	CTt	3	2	0.666667	28044-28046
ORF8	51	A51L		nonsyn	GCT	CTA	3	1	0.333333	28044-28046
ORF8	51	A51K		nonsyn	GCT	AAG	1	1	1	28044-28046
ORF8	51	A51H		nonsyn	GCT	CAC	1	1	1	28044-28046
ORF8	51	A51N		nonsyn	GCT	AAC	1	1	1	28044-28046
ORF8	51	A51I		nonsyn	GCt	ATt	1	1	1	28044-28046

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF8	51	A51S	Gct	Tct	15691	15707	All	0.003001
ORF8	51	A51S	GcT	TcC	10	15707	All	0.000002
ORF8	51	A51S	GcT	TcA	5	15707	All	0.000001
ORF8	51	A51S	GcT	TcG	1	15707	All	0
ORF8	51	A51S	Gct	Tct	13664	13674	B.1.637	0.998465
ORF8	51	A51S	GcT	TcC	10	13674	B.1.637	0.000731
ORF8	51	A51V	gCt	gTt	8568	8568	All	0.001639
ORF8	51	A51del	GCT	---	953	953	All	0.000182
ORF8	51	A51V	gCt	gTt	929	929	B.1.1.333	1
ORF8	51	A51V	gCt	gTt	721	721	AY.4	0.001122
ORF8	51	A51V	gCt	gTt	721	721	AY.44	0.004389
ORF8	51	A51V	gCt	gTt	705	705	B.1.1.7	0.000631
ORF8	51	A51V	gCt	gTt	563	563	AY.43	0.002494
ORF8	51	A51T	Gct	Act	471	472	All	0.00009
ORF8	51	A51T	GcT	AcC	1	472	All	0
ORF8	51	A51V	gCt	gTt	441	441	AY.103	0.002738
ORF8	51	A51S	Gct	Tct	407	407	C.37	0.047238
ORF8	51	A51S	Gct	Tct	383	384	B.1	0.003508
ORF8	51	A51S	GcT	TcA	1	384	B.1	0.000009
ORF8	51	A51V	gCt	gTt	352	352	B.1.617.2	0.001325
ORF8	51	A51V	gCt	gTt	300	300	B.1.177	0.00395
ORF8	51	A51A	gcT	gcC	275	287	All	0.000053
ORF8	51	A51A	gcT	gcA	10	287	All	0.000002
ORF8	51	A51A	gcT	gcG	2	287	All	0
ORF8	51	A51T	Gct	Act	274	274	AY.44	0.001668
ORF8	51	A51V	gCt	gTt	213	213	B.1.628	0.075053
ORF8	51	A51del	GCT	---	201	201	B.1.1.7	0.00018
ORF8	51	A51V	gCt	gTt	189	189	B.1.2	0.001664
ORF8	51	A51V	gCt	gTt	170	170	AY.3	0.001691
ORF8	51	A51V	gCt	gTt	161	161	B.1.279	0.082691
ORF8	51	A51V	gCt	gTt	157	157	AY.20	0.006102
ORF8	51	A51D	gCt	gAt	143	143	All	0.000027
ORF8	51	A51S	Gct	Tct	124	126	B.1.1	0.002249
ORF8	51	A51S	GcT	TcA	2	126	B.1.1	0.000036
ORF8	51	A51V	gCt	gTt	126	126	B.1.177.35	0.087077
ORF8	51	A51S	Gct	Tct	117	117	B.1.617.2	0.000441
ORF8	51	A51V	gCt	gTt	115	115	B.1.351	0.003419
ORF8	51	A51V	gCt	gTt	115	115	P.1	0.001812
ORF8	51	A51V	gCt	gTt	104	104	AY.39	0.00257
ORF8	51	A51V	gCt	gTt	101	101	AY.5	0.002086
ORF8	51	A51V	gCt	gTt	100	100	B.1.258.11	0.039635
ORF8	51	A51del	GCT	---	96	96	AY.4	0.000149
ORF8	51	A51V	gCt	gTt	95	95	B.1.1.519	0.003773
ORF8	51	A51V	gCt	gTt	88	88	B.1	0.000806
ORF8	51	A51V	gCt	gTt	88	88	P.2	0.016424
ORF8	51	A51S	Gct	Tct	87	87	B.1.1.302	0.180498
ORF8	51	A51A	gcT	gcC	82	82	B.1.1.176	0.036028
ORF8	51	A51V	gCt	gTt	80	80	AY.102	0.002121
ORF8	51	A51V	gCt	gTt	78	78	B.1.429	0.001835
ORF8	51	A51S	Gct	Tct	77	77	AY.4	0.00012
ORF8	51	A51V	gCt	gTt	76	76	B.1.160	0.00237
ORF8	51	A51V	gCt	gTt	70	70	AY.29	0.001104
ORF8	51	A51V	gCt	gTt	69	69	B.1.250	1
ORF8	51	A51V	gCt	gTt	66	66	B.1.36.19	0.611111
ORF8	51	A51del	GCT	---	61	61	AY.103	0.000379
ORF8	51	A51V	gCt	gTt	60	60	B.1.1	0.001088
ORF8	51	A51del	GCT	---	59	59	B.1.1.294	0.074684
ORF8	51	A51T	Gct	Act	58	58	P.1.10	0.015629
ORF8	51	A51S	Gct	Tct	57	57	AY.44	0.000347
ORF8	51	A51V	gCt	gTt	49	49	AY.25	0.000295
ORF8	51	A51S	Gct	Tct	46	46	AY.103	0.000286
ORF8	51	A51S	Gct	Tct	46	46	AY.43	0.000204
ORF8	51	A51del	GCT	---	45	45	B.1.351	0.001338
ORF8	51	A51V	gCt	gTt	44	44	AY.4.2	0.000954
ORF8	51	A51V	gCt	gTt	44	44	AY.9.2	0.001616
ORF8	51	A51V	gCt	gTt	42	42	AY.101	0.020598
ORF8	51	A51T	Gct	Act	42	42	B.1.617.2	0.000158
ORF8	51	A51S	Gct	Tct	41	41	B.1.1.196	0.234286
ORF8	51	A51V	gCt	gTt	41	41	B.1.621	0.003629
ORF8	51	A51S	Gct	Tct	40	40	AY.102	0.001061
ORF8	51	A51D	gCt	gAt	40	40	AY.7	0.00784
ORF8	51	A51S	Gct	Tct	40	40	B.1.1.7	0.000036
ORF8	51	A51del	GCT	---	38	38	AY.29	0.000599
ORF8	51	A51V	gCt	gTt	38	38	B.1.526	0.000893
ORF8	51	A51V	gCt	gTt	36	36	AY.100	0.001656
ORF8	51	A51del	GCT	---	35	35	B.1.1	0.000635
ORF8	51	A51V	gCt	gTt	35	35	B.1.177.42	0.031306
ORF8	51	A51S	Gct	Tct	34	34	AY.54	0.003242
ORF8	51	A51del	GCT	---	34	34	B.1.243	0.002366
ORF8	51	A51del	GCT	---	33	33	B.1.1.222	0.006732
ORF8	51	A51del	GCT	---	32	32	B.1.160	0.000998
ORF8	51	A51V	gCt	gTt	31	31	AY.26	0.000878
ORF8	51	A51V	gCt	gTt	31	31	AY.33	0.00207
ORF8	51	A51S	Gct	Tct	31	31	B.1.526	0.000729
ORF8	51	A51V	gCt	gTt	30	30	B.1.427	0.001515
ORF8	51	A51V	gCt	gTt	30	30	B.1.438.1	0.003218
ORF8	51	A51A	gcT	gcC	30	30	P.1.15	0.00697
ORF8	51	A51V	gCt	gTt	27	27	B.1.258	0.001797
ORF8	51	A51V	gCt	gTt	26	26	B.1.1.318	0.007846
ORF8	51	A51V	gCt	gTt	26	26	B.1.1.329	0.1
ORF8	51	A51V	gCt	gTt	26	26	B.1.1.39	0.013252
ORF8	51	A51V	gCt	gTt	26	26	C.37	0.003018
ORF8	51	A51V	gCt	gTt	22	22	AY.23	0.001534
ORF8	51	A51A	gcT	gcC	19	21	AY.4	0.00003
ORF8	51	A51A	gcT	gcA	1	21	AY.4	0.000002
ORF8	51	A51A	gcT	gcG	1	21	AY.4	0.000002
ORF8	51	A51S	Gct	Tct	21	21	AY.4.5	0.002257
ORF8	51	A51del	GCT	---	21	21	AY.44	0.000128
ORF8	51	A51V	gCt	gTt	21	21	AY.47	0.000653
ORF8	51	A51V	gCt	gTt	21	21	B.1.466.2	0.008216
ORF8	51	A51V	gCt	gTt	20	20	AY.52	0.016287
ORF8	51	A51S	Gct	Tct	19	19	AY.119	0.000671
ORF8	51	A51V	gCt	gTt	19	19	AY.42	0.000764
ORF8	51	A51S	Gct	Tct	19	19	B.1.177.7	0.003132
ORF8	51	A51V	gCt	gTt	19	19	C.36.3	0.010777
ORF8	51	A51del	GCT	---	18	18	B	0.002301
ORF8	51	A51A	gcT	gcC	17	18	B.1.1.7	0.000015
ORF8	51	A51A	gcT	gcA	1	18	B.1.1.7	0.000001
ORF8	51	A51T	Gct	Act	17	17	AY.110	0.001916
ORF8	51	A51del	GCT	---	17	17	AY.3	0.000169
ORF8	51	A51V	gCt	gTt	17	17	B.1.3	0.044503
ORF8	51	A51A	gcT	gcC	16	16	AY.16	0.006074
ORF8	51	A51S	Gct	Tct	16	16	AY.34	0.001551
ORF8	51	A51A	gcT	gcC	16	16	AY.4.2.1	0.002384
ORF8	51	A51D	gCt	gAt	16	16	AY.44	0.000097
ORF8	51	A51V	gCt	gTt	16	16	AY.46	0.001665
ORF8	51	A51S	Gct	Tct	16	16	B.1.425	0.047904
ORF8	51	A51S	Gct	Tct	15	15	AY.3	0.000149
ORF8	51	A51A	gcT	gcC	15	15	B.1.1	0.000272
ORF8	51	A51V	gCt	gTt	15	15	B.1.177.4	0.003166
ORF8	51	A51V	gCt	gTt	14	14	AY.9	0.000946
ORF8	51	A51V	gCt	gTt	14	14	B.1.36.29	0.007243
ORF8	51	A51V	gCt	gTt	14	14	B.1.617.1	0.001806
ORF8	51	A51del	GCT	---	14	14	P.1	0.000221
ORF8	51	A51F	GCt	TTt	13	13	All	0.000002
ORF8	51	A51V	gCt	gTt	13	13	AY.119	0.000459
ORF8	51	A51S	Gct	Tct	13	13	AY.25	0.000078
ORF8	51	A51S	Gct	Tct	13	13	AY.4.2	0.000282
ORF8	51	A51V	gCt	gTt	13	13	B.1.1.113	0.090909
ORF8	51	A51D	gCt	gAt	13	13	B.1.1.7	0.000012
ORF8	51	A51T	Gct	Act	13	13	B.1.2	0.000114
ORF8	51	A51V	gCt	gTt	13	13	B.1.243	0.000905
ORF8	51	A51S	Gct	Tct	13	13	P.1	0.000205
ORF8	51	A51S	Gct	Tct	12	12	AY.26	0.00034
ORF8	51	A51V	gCt	gTt	12	12	AY.4.5	0.00129
ORF8	51	A51V	gCt	gTt	12	12	B.1.177.82	0.005728
ORF8	51	A51V	gCt	gTt	12	12	B.1.221	0.000852
ORF8	51	A51del	GCT	---	11	11	AY.27	0.000712
ORF8	51	A51V	gCt	gTt	11	11	AY.36	0.00163
ORF8	51	A51S	Gct	Tct	11	11	B	0.001406
ORF8	51	A51del	GCT	---	11	11	B.1.1.318	0.003319
ORF8	51	A51G	gCt	gGt	9	10	All	0.000002
ORF8	51	A51del1	gcT	gc-	6	10	All	0.000001
ORF8	51	A51del1	Gct	-ct	4	10	All	0.000001
ORF8	51	A51G	gCT	gGC	1	10	All	0
ORF8	51	A51T	Gct	Act	10	10	AY.75	0.00056
ORF8	51	A51del	GCT	---	10	10	B.1	0.000092
ORF8	51	A51S	Gct	Tct	10	10	B.1.1.306	0.004384
ORF8	51	A51V	gCt	gTt	10	10	B.1.1.369	0.004462
ORF8	51	A51V	gCt	gTt	10	10	B.1.36	0.001459
ORF8	51	A51S	Gct	Tct	10	10	B.1.565	0.008104
ORF8	51	A51F	GCt	TTt	10	10	B.1.637	0.000731
ORF8	51	A51V	gCt	gTt	10	10	Q.8	0.001649
ORF8	51	A51del	GCT	---	9	9	AY.118	0.000564
ORF8	51	A51V	gCt	gTt	9	9	AY.45	0.001095
ORF8	51	A51V	gCt	gTt	9	9	AY.46.6	0.00065
ORF8	51	A51V	gCt	gTt	9	9	AY.9.1	0.000754
ORF8	51	A51V	gCt	gTt	9	9	B.1.1.153	0.009858
ORF8	51	A51V	gCt	gTt	9	9	B.1.1.216	0.008014
ORF8	51	A51V	gCt	gTt	9	9	B.1.1.222	0.001836
ORF8	51	A51S	Gct	Tct	9	9	B.1.1.243	0.036735
ORF8	51	A51V	gCt	gTt	9	9	B.1.1.63	0.003472
ORF8	51	A51V	gCt	gTt	9	9	B.1.110.3	0.006466
ORF8	51	A51S	Gct	Tct	9	9	B.1.160	0.000281
ORF8	51	A51A	gcT	gcC	9	9	B.1.2	0.000079
ORF8	51	A51S	Gct	Tct	9	9	B.1.36	0.001313
ORF8	51	A51del	GCT	---	9	9	B.1.617.2	0.000034
ORF8	51	A51V	gCt	gTt	8	8	AY.3.1	0.000682
ORF8	51	A51del	GCT	---	8	8	B.1.1.284	0.000859
ORF8	51	A51del	GCT	---	8	8	B.1.2	0.00007
ORF8	51	A51S	Gct	Tct	8	8	B.1.2	0.00007
ORF8	51	A51del	GCT	---	8	8	B.1.240	0.001725
ORF8	51	A51T	Gct	Act	8	8	B.1.427	0.000404
ORF8	51	A51V	gCt	gTt	8	8	B.1.525	0.000905
ORF8	51	A51V	gCt	gTt	8	8	B.1.596	0.000697
ORF8	51	A51S	Gct	Tct	8	8	B.1.621	0.000708
ORF8	51	A51V	gCt	gTt	8	8	D.2	0.0006
ORF8	51	A51V	gCt	gTt	8	8	P.1.1	0.002541
ORF8	51	A51V	gCt	gTt	8	8	P.1.12	0.003872
ORF8	51	A51V	gCt	gTt	8	8	P.1.17	0.001294
ORF8	51	A51S	Gct	Tct	7	7	AY.117	0.000592
ORF8	51	A51V	gCt	gTt	7	7	AY.14	0.000616
ORF8	51	A51S	Gct	Tct	7	7	AY.33	0.000467
ORF8	51	A51D	gCt	gAt	7	7	AY.4	0.000011
ORF8	51	A51del	GCT	---	7	7	AY.4.2	0.000152
ORF8	51	A51V	gCt	gTt	7	7	AY.6	0.000288
ORF8	51	A51V	gCt	gTt	7	7	AY.98	0.000553
ORF8	51	A51V	gCt	gTt	7	7	AY.98.1	0.000339
ORF8	51	A51S	Gct	Tct	7	7	B.1.1.176	0.003076
ORF8	51	A51del	GCT	---	7	7	B.1.1.265	0.022082
ORF8	51	A51del	GCT	---	7	7	B.1.1.519	0.000278
ORF8	51	A51S	Gct	Tct	7	7	B.1.177	0.000092
ORF8	51	A51S	Gct	Tct	7	7	B.1.214.2	0.004197
ORF8	51	A51S	Gct	Tct	7	7	B.1.258	0.000466
ORF8	51	A51del	GCT	---	7	7	B.1.36.16	0.009972
ORF8	51	A51A	gcT	gcC	5	7	B.1.617.2	0.000019
ORF8	51	A51A	gcT	gcA	2	7	B.1.617.2	0.000008
ORF8	51	A51del	GCT	---	7	7	B.1.628	0.002467
ORF8	51	A51S	Gct	Tct	7	7	B.1.636	0.04698
ORF8	51	A51del	GCT	---	7	7	P.1.14	0.000335
ORF8	51	A51V	gCt	gTt	7	7	P.1.15	0.001626
ORF8	51	A51V	gCt	gTt	7	7	P.1.4	0.006836
ORF8	51	A51V	gCt	gTt	6	6	AY.117	0.000507
ORF8	51	A51S	Gct	Tct	6	6	AY.118	0.000376
ORF8	51	A51del	GCT	---	6	6	AY.119	0.000212
ORF8	51	A51V	gCt	gTt	6	6	AY.120	0.000223
ORF8	51	A51S	Gct	Tct	6	6	AY.47	0.000187
ORF8	51	A51V	gCt	gTt	6	6	AY.85	0.002563
ORF8	51	A51V	gCt	gTt	6	6	AY.97	0.010204
ORF8	51	A51V	gCt	gTt	6	6	B.1.1.117	0.058252
ORF8	51	A51V	gCt	gTt	6	6	B.1.1.214	0.000333
ORF8	51	A51S	Gct	Tct	6	6	B.1.1.28	0.001867
ORF8	51	A51V	gCt	gTt	6	6	B.1.1.306	0.00263
ORF8	51	A51V	gCt	gTt	6	6	B.1.1.44	0.014458
ORF8	51	A51T	Gct	Act	6	6	B.1.1.7	0.000005
ORF8	51	A51del	GCT	---	6	6	B.1.177	0.000079
ORF8	51	A51S	Gct	Tct	6	6	B.1.177.73	0.003398
ORF8	51	A51del	GCT	---	6	6	B.1.177.83	0.008889
ORF8	51	A51del	GCT	---	6	6	B.1.243.2	0.086957
ORF8	51	A51D	gCt	gAt	6	6	B.1.617.2	0.000023
ORF8	51	A51del2	GCt	--t	2	5	All	0
ORF8	51	A51del2	gCT	g--	2	5	All	0
ORF8	51	A51del2	GCT	--N	1	5	All	0
ORF8	51	A51V	gCt	gTt	5	5	AY.108	0.005513
ORF8	51	A51S	Gct	Tct	5	5	AY.114	0.001156
ORF8	51	A51V	gCt	gTt	5	5	AY.12	0.00158
ORF8	51	A51A	gcT	gcC	5	5	AY.14	0.00044
ORF8	51	A51S	Gct	Tct	5	5	AY.20	0.000194
ORF8	51	A51V	gCt	gTt	5	5	AY.27	0.000324
ORF8	51	A51del	GCT	---	5	5	AY.29.1	0.001103
ORF8	51	A51S	Gct	Tct	5	5	AY.42	0.000201
ORF8	51	A51S	Gct	Tct	5	5	AY.45	0.000608
ORF8	51	A51V	gCt	gTt	5	5	AY.75	0.00028
ORF8	51	A51S	Gct	Tct	5	5	AY.98.1	0.000242
ORF8	51	A51V	gCt	gTt	5	5	B.1.1.226	0.02907
ORF8	51	A51S	Gct	Tct	5	5	B.1.1.301	0.005896
ORF8	51	A51V	gCt	gTt	5	5	B.1.1.312	0.00956
ORF8	51	A51V	gCt	gTt	5	5	B.1.1.37	0.000964
ORF8	51	A51V	gCt	gTt	5	5	B.1.177.21	0.000382
ORF8	51	A51D	gCt	gAt	5	5	B.1.177.42	0.004472
ORF8	51	A51S	Gct	Tct	5	5	B.1.617.1	0.000645
ORF8	51	A51del	GCT	---	4	4		0.222222
ORF8	51	A51P	GcT	CcA	2	4	All	0
ORF8	51	A51P	Gct	Cct	2	4	All	0
ORF8	51	A51V	gCt	gTt	4	4	AY.109	0.002959
ORF8	51	A51V	gCt	gTt	4	4	AY.110	0.000451
ORF8	51	A51V	gCt	gTt	4	4	AY.113	0.00057
ORF8	51	A51V	gCt	gTt	4	4	AY.13	0.000644
ORF8	51	A51S	Gct	Tct	4	4	AY.16.1	0.00188
ORF8	51	A51A	gcT	gcA	3	4	AY.25	0.000018
ORF8	51	A51A	gcT	gcC	1	4	AY.25	0.000006
ORF8	51	A51D	gCt	gAt	4	4	AY.29.1	0.000882
ORF8	51	A51V	gCt	gTt	4	4	AY.34	0.000388
ORF8	51	A51T	Gct	Act	4	4	AY.4	0.000006
ORF8	51	A51A	gcT	gcC	4	4	AY.45	0.000487
ORF8	51	A51V	gCt	gTt	4	4	AY.5.4	0.001107
ORF8	51	A51del	GCT	---	4	4	AY.6	0.000165
ORF8	51	A51S	Gct	Tct	4	4	AY.61	0.000419
ORF8	51	A51V	gCt	gTt	4	4	AY.61	0.000419
ORF8	51	A51V	gCt	gTt	4	4	AY.67	0.001857
ORF8	51	A51del	GCT	---	4	4	AY.7.2	0.002237
ORF8	51	A51S	Gct	Tct	4	4	AY.86	0.00332
ORF8	51	A51V	gCt	gTt	4	4	AY.90	0.002738
ORF8	51	A51V	gCt	gTt	4	4	B	0.000511
ORF8	51	A51T	Gct	Act	4	4	B.1.1	0.000073
ORF8	51	A51del	GCT	---	4	4	B.1.1.214	0.000222
ORF8	51	A51D	gCt	gAt	4	4	B.1.1.228	0.012195
ORF8	51	A51V	gCt	gTt	4	4	B.1.1.317	0.001647
ORF8	51	A51V	gCt	gTt	4	4	B.1.1.487	0.022346
ORF8	51	A51D	gCt	gAt	4	4	B.1.177.35	0.002764
ORF8	51	A51V	gCt	gTt	4	4	B.1.177.57	0.001124
ORF8	51	A51D	gCt	gAt	4	4	B.1.2	0.000035
ORF8	51	A51V	gCt	gTt	4	4	B.1.210	0.008529
ORF8	51	A51T	Gct	Act	4	4	B.1.258.17	0.000416
ORF8	51	A51V	gCt	gTt	4	4	B.1.258.17	0.000416
ORF8	51	A51V	gCt	gTt	4	4	B.1.36.18	0.001681
ORF8	51	A51V	gCt	gTt	4	4	B.1.362	0.006163
ORF8	51	A51S	Gct	Tct	4	4	B.1.409	0.003125
ORF8	51	A51S	Gct	Tct	4	4	B.1.618	0.016129
ORF8	51	A51V	gCt	gTt	4	4	B.1.619	0.003484
ORF8	51	A51S	Gct	Tct	4	4	C.16	0.004242
ORF8	51	A51D	gCt	gAt	4	4	P.1	0.000063
ORF8	51	A51del	GCT	---	4	4	P.1.1	0.001271
ORF8	51	A51V	gCt	gTt	4	4	Q.4	0.001819
ORF8	51	A51V	gCt	gTt	4	4	R.1	0.00036
ORF8	51	A51L	GCt	CTt	2	3	All	0
ORF8	51	A51L	GCT	CTA	1	3	All	0
ORF8	51	A51S	Gct	Tct	3	3	AY.100	0.000138
ORF8	51	A51A	gcT	gcC	3	3	AY.103	0.000019
ORF8	51	A51V	gCt	gTt	3	3	AY.106	0.001005
ORF8	51	A51V	gCt	gTt	3	3	AY.115	0.015625
ORF8	51	A51V	gCt	gTt	3	3	AY.118	0.000188
ORF8	51	A51T	Gct	Act	3	3	AY.25	0.000018
ORF8	51	A51del	GCT	---	3	3	AY.25	0.000018
ORF8	51	A51del	GCT	---	3	3	AY.26	0.000085
ORF8	51	A51S	Gct	Tct	3	3	AY.29	0.000047
ORF8	51	A51V	gCt	gTt	3	3	AY.30	0.001187
ORF8	51	A51S	Gct	Tct	3	3	AY.39	0.000074
ORF8	51	A51V	gCt	gTt	3	3	AY.59	0.001589
ORF8	51	A51S	Gct	Tct	3	3	AY.6	0.000123
ORF8	51	A51T	Gct	Act	3	3	AY.6	0.000123
ORF8	51	A51V	gCt	gTt	3	3	AY.68	0.000821
ORF8	51	A51V	gCt	gTt	3	3	AY.74	0.000347
ORF8	51	A51A	gcT	gcC	3	3	AY.75	0.000168
ORF8	51	A51A	gcT	gcC	3	3	AY.91	0.002191
ORF8	51	A51V	gCt	gTt	3	3	AY.92	0.000862
ORF8	51	A51V	gCt	gTt	3	3	AY.95	0.002283
ORF8	51	A51S	Gct	Tct	3	3	AY.98	0.000237
ORF8	51	A51V	gCt	gTt	3	3	AY.99.2	0.000276
ORF8	51	A51D	gCt	gAt	3	3	B.1	0.000027
ORF8	51	A51V	gCt	gTt	3	3	B.1.1.10	0.003344
ORF8	51	A51S	Gct	Tct	3	3	B.1.1.318	0.000905
ORF8	51	A51V	gCt	gTt	3	3	B.1.1.337	0.010791
ORF8	51	A51S	Gct	Tct	3	3	B.1.1.348	0.002389
ORF8	51	A51del2	GCt	--t	1	3	B.1.1.7	0.000001
ORF8	51	A51del2	GCT	--N	1	3	B.1.1.7	0.000001
ORF8	51	A51del2	gCT	g--	1	3	B.1.1.7	0.000001
ORF8	51	A51V	gCt	gTt	3	3	B.1.111	0.003525
ORF8	51	A51D	gCt	gAt	3	3	B.1.13	0.007126
ORF8	51	A51V	gCt	gTt	3	3	B.1.139	0.002199
ORF8	51	A51V	gCt	gTt	3	3	B.1.160.10	0.024194
ORF8	51	A51V	gCt	gTt	3	3	B.1.177.16	0.001993
ORF8	51	A51D	gCt	gAt	3	3	B.1.177.46	0.002755
ORF8	51	A51V	gCt	gTt	3	3	B.1.177.7	0.000495
ORF8	51	A51V	gCt	gTt	3	3	B.1.177.87	0.002183
ORF8	51	A51V	gCt	gTt	3	3	B.1.201	0.017045
ORF8	51	A51del	GCT	---	3	3	B.1.22	0.003953
ORF8	51	A51S	Gct	Tct	3	3	B.1.222	0.005076
ORF8	51	A51S	Gct	Tct	3	3	B.1.243	0.000209
ORF8	51	A51V	gCt	gTt	3	3	B.1.36.16	0.004274
ORF8	51	A51V	gCt	gTt	3	3	B.1.416	0.003807
ORF8	51	A51del	GCT	---	3	3	B.1.429	0.000071
ORF8	51	A51A	gcT	gcC	2	3	B.1.429	0.000047
ORF8	51	A51A	gcT	gcA	1	3	B.1.429	0.000024
ORF8	51	A51S	Gct	Tct	3	3	B.1.456	0.009804
ORF8	51	A51del	GCT	---	3	3	B.1.509	0.002597
ORF8	51	A51del	GCT	---	3	3	B.1.526	0.000071
ORF8	51	A51S	Gct	Tct	3	3	B.1.596	0.000261
ORF8	51	A51V	gCt	gTt	3	3	P.1.14	0.000143
ORF8	51	A51del	GCT	---	3	3	P.1.15	0.000697
ORF8	51	A51V	gCt	gTt	3	3	P.1.17.1	0.002625
ORF8	51	A51V	gCt	gTt	3	3	P.1.8	0.014354
ORF8	51	A51A	gcT	gcC	2	2		0.111111
ORF8	51	A51L	GCt	CTt	2	2		0.111111
ORF8	51	A51V	gCt	gTt	2	2	AD.2	0.000438
ORF8	51	A51T	Gct	Act	2	2	AY.103	0.000012
ORF8	51	A51V	gCt	gTt	2	2	AY.111	0.000366
ORF8	51	A51V	gCt	gTt	2	2	AY.114	0.000462
ORF8	51	A51V	gCt	gTt	2	2	AY.116	0.000574
ORF8	51	A51T	Gct	Act	2	2	AY.117	0.000169
ORF8	51	A51A	gcT	gcC	2	2	AY.119	0.000071
ORF8	51	A51S	Gct	Tct	2	2	AY.121	0.000271
ORF8	51	A51V	gCt	gTt	2	2	AY.121	0.000271
ORF8	51	A51V	gCt	gTt	2	2	AY.16	0.000759
ORF8	51	A51V	gCt	gTt	2	2	AY.19	0.002281
ORF8	51	A51D	gCt	gAt	2	2	AY.20	0.000078
ORF8	51	A51D	gCt	gAt	2	2	AY.25	0.000012
ORF8	51	A51A	gcT	gcC	2	2	AY.34	0.000194
ORF8	51	A51V	gCt	gTt	2	2	AY.34.1	0.00102
ORF8	51	A51del	GCT	---	2	2	AY.39	0.000049
ORF8	51	A51V	gCt	gTt	2	2	AY.39.1	0.000079
ORF8	51	A51S	Gct	Tct	2	2	AY.39.1	0.000079
ORF8	51	A51V	gCt	gTt	2	2	AY.41	0.000588
ORF8	51	A51T	Gct	Act	2	2	AY.43	0.000009
ORF8	51	A51D	gCt	gAt	2	2	AY.43	0.000009
ORF8	51	A51del	GCT	---	2	2	AY.43	0.000009
ORF8	51	A51S	Gct	Tct	2	2	AY.46	0.000208
ORF8	51	A51del	GCT	---	2	2	AY.48	0.00093
ORF8	51	A51S	Gct	Tct	2	2	AY.5	0.000041
ORF8	51	A51V	gCt	gTt	2	2	AY.5.3	0.000675
ORF8	51	A51V	gCt	gTt	2	2	AY.55	0.001835
ORF8	51	A51S	Gct	Tct	2	2	AY.59	0.001059
ORF8	51	A51D	gCt	gAt	2	2	AY.6	0.000082
ORF8	51	A51V	gCt	gTt	2	2	AY.65	0.001066
ORF8	51	A51S	Gct	Tct	2	2	AY.7.2	0.001119
ORF8	51	A51V	gCt	gTt	2	2	AY.75.1	0.000361
ORF8	51	A51del	GCT	---	2	2	AY.84	0.000875
ORF8	51	A51S	Gct	Tct	2	2	B.1.1.1	0.000653
ORF8	51	A51T	Gct	Act	2	2	B.1.1.10	0.00223
ORF8	51	A51del1	gcT	gc-	2	2	B.1.1.141	0.004024
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.263	0.003115
ORF8	51	A51S	Gct	Tct	2	2	B.1.1.27	0.011299
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.28	0.000622
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.286	0.005797
ORF8	51	A51del1	Gct	-ct	2	2	B.1.1.318	0.000604
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.33	0.000842
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.398	0.006452
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.409	0.005666
ORF8	51	A51V	gCt	gTt	2	2	B.1.1.464	0.002946
ORF8	51	A51G	gCt	gGt	2	2	B.1.1.7	0.000002
ORF8	51	A51F	GCt	TTt	2	2	B.1.1.7	0.000002
ORF8	51	A51del1	Gct	-ct	1	2	B.1.1.7	0.000001
ORF8	51	A51del1	gcT	gc-	1	2	B.1.1.7	0.000001
ORF8	51	A51S	Gct	Tct	2	2	B.1.177.20	0.003035
ORF8	51	A51A	gcT	gcC	2	2	B.1.177.21	0.000153
ORF8	51	A51V	gCt	gTt	2	2	B.1.177.44	0.001038
ORF8	51	A51S	Gct	Tct	2	2	B.1.177.81	0.000379
ORF8	51	A51S	Gct	Tct	2	2	B.1.177.9	0.002663
ORF8	51	A51V	gCt	gTt	2	2	B.1.206	0.001631
ORF8	51	A51del	GCT	---	2	2	B.1.210	0.004264
ORF8	51	A51V	gCt	gTt	2	2	B.1.221.1	0.005814
ORF8	51	A51V	gCt	gTt	2	2	B.1.235	0.005038
ORF8	51	A51V	gCt	gTt	2	2	B.1.237	0.00995
ORF8	51	A51del	GCT	---	2	2	B.1.258.17	0.000208
ORF8	51	A51V	gCt	gTt	2	2	B.1.258.3	0.00335
ORF8	51	A51V	gCt	gTt	2	2	B.1.311	0.000549
ORF8	51	A51S	Gct	Tct	2	2	B.1.336	0.004878
ORF8	51	A51S	Gct	Tct	2	2	B.1.351	0.000059
ORF8	51	A51S	Gct	Tct	2	2	B.1.351.3	0.001753
ORF8	51	A51del	GCT	---	2	2	B.1.36	0.000292
ORF8	51	A51S	Gct	Tct	2	2	B.1.36.16	0.002849
ORF8	51	A51V	gCt	gTt	2	2	B.1.36.8	0.002
ORF8	51	A51V	gCt	gTt	2	2	B.1.39	0.007812
ORF8	51	A51S	Gct	Tct	2	2	B.1.413	0.008511
ORF8	51	A51del	GCT	---	2	2	B.1.427	0.000101
ORF8	51	A51S	Gct	Tct	2	2	B.1.466.2	0.000782
ORF8	51	A51V	gCt	gTt	2	2	B.1.470	0.002809
ORF8	51	A51S	Gct	Tct	1	2	B.1.497	0.000315
ORF8	51	A51S	GcT	TcA	1	2	B.1.497	0.000315
ORF8	51	A51V	gCt	gTt	2	2	B.1.499	0.002101
ORF8	51	A51S	Gct	Tct	2	2	B.1.525	0.000226
ORF8	51	A51V	gCt	gTt	2	2	B.1.564	0.000852
ORF8	51	A51V	gCt	gTt	2	2	B.1.565	0.001621
ORF8	51	A51V	gCt	gTt	2	2	B.1.576	0.001813
ORF8	51	A51V	gCt	gTt	2	2	B.1.606	0.012048
ORF8	51	A51V	gCt	gTt	2	2	B.1.617.3	0.00597
ORF8	51	A51A	gcT	gcC	2	2	B.1.621.1	0.001012
ORF8	51	A51V	gCt	gTt	2	2	B.1.93	0.001867
ORF8	51	A51V	gCt	gTt	2	2	B.3	0.001661
ORF8	51	A51del	GCT	---	2	2	B.40	0.000729
ORF8	51	A51V	gCt	gTt	2	2	C.16	0.002121
ORF8	51	A51V	gCt	gTt	2	2	C.2.1	0.013333
ORF8	51	A51A	gcT	gcC	2	2	C.30	0.003454
ORF8	51	A51V	gCt	gTt	2	2	C.36	0.001821
ORF8	51	A51V	gCt	gTt	2	2	L.3	0.007092
ORF8	51	A51T	Gct	Act	2	2	P.1	0.000032
ORF8	51	A51A	gcT	gcC	2	2	P.1.14	0.000096
ORF8	51	A51S	Gct	Tct	2	2	P.1.15	0.000465
ORF8	51	A51D	gCt	gAt	2	2	P.1.17	0.000324
ORF8	51	A51V	gCt	gTt	2	2	P.6	0.006289
ORF8	51	A51V	gCt	gTt	1	1	A.19	0.009434
ORF8	51	A51del1	gcT	gc-	1	1	A.23.1	0.000704
ORF8	51	A51S	Gct	Tct	1	1	A.23.1	0.000704
ORF8	51	A51S	Gct	Tct	1	1	A.3	0.002096
ORF8	51	A51del	GCT	---	1	1	AE.4	0.043478
ORF8	51	A51N	GCT	AAC	1	1	All	0
ORF8	51	A51I	GCt	ATt	1	1	All	0
ORF8	51	A51K	GCT	AAG	1	1	All	0
ORF8	51	A51H	GCT	CAC	1	1	All	0
ORF8	51	A51V	gCt	gTt	1	1	AP.1	0.001502
ORF8	51	A51V	gCt	gTt	1	1	AT.1	0.005128
ORF8	51	A51S	Gct	Tct	1	1	AU.3	0.00211
ORF8	51	A51V	gCt	gTt	1	1	AY.1	0.000396
ORF8	51	A51del	GCT	---	1	1	AY.100	0.000046
ORF8	51	A51A	gcT	gcC	1	1	AY.100	0.000046
ORF8	51	A51A	gcT	gcC	1	1	AY.102	0.000027
ORF8	51	A51D	gCt	gAt	1	1	AY.103	0.000006
ORF8	51	A51V	gCt	gTt	1	1	AY.104	0.001984
ORF8	51	A51V	gCt	gTt	1	1	AY.107	0.000466
ORF8	51	A51del	GCT	---	1	1	AY.108	0.001103
ORF8	51	A51S	Gct	Tct	1	1	AY.109	0.00074
ORF8	51	A51A	gcT	gcA	1	1	AY.113	0.000142
ORF8	51	A51D	gCt	gAt	1	1	AY.117	0.000085
ORF8	51	A51A	gcT	gcC	1	1	AY.12	0.000316
ORF8	51	A51S	Gct	Tct	1	1	AY.12	0.000316
ORF8	51	A51S	Gct	Tct	1	1	AY.120	0.000037
ORF8	51	A51A	gcT	gcC	1	1	AY.120	0.000037
ORF8	51	A51A	gcT	gcC	1	1	AY.13	0.000161
ORF8	51	A51T	Gct	Act	1	1	AY.13	0.000161
ORF8	51	A51V	gCt	gTt	1	1	AY.16.1	0.00047
ORF8	51	A51V	gCt	gTt	1	1	AY.17	0.008197
ORF8	51	A51S	Gct	Tct	1	1	AY.19	0.00114
ORF8	51	A51V	gCt	gTt	1	1	AY.2	0.000356
ORF8	51	A51T	Gct	Act	1	1	AY.20	0.000039
ORF8	51	A51A	gcT	gcC	1	1	AY.20	0.000039
ORF8	51	A51S	Gct	Tct	1	1	AY.23	0.00007
ORF8	51	A51T	Gct	Act	1	1	AY.23	0.00007
ORF8	51	A51del	GCT	---	1	1	AY.23	0.00007
ORF8	51	A51A	gcT	gcC	1	1	AY.23	0.00007
ORF8	51	A51V	gCt	gTt	1	1	AY.23.1	0.000417
ORF8	51	A51S	Gct	Tct	1	1	AY.23.1	0.000417
ORF8	51	A51V	gCt	gTt	1	1	AY.24	0.000431
ORF8	51	A51A	gcT	gcC	1	1	AY.24	0.000431
ORF8	51	A51G	gCt	gGt	1	1	AY.25	0.000006
ORF8	51	A51G	gCt	gGt	1	1	AY.3	0.00001
ORF8	51	A51P	GcT	CcA	1	1	AY.3	0.00001
ORF8	51	A51del2	GCt	--t	1	1	AY.3	0.00001
ORF8	51	A51S	Gct	Tct	1	1	AY.3.1	0.000085
ORF8	51	A51S	Gct	Tct	1	1	AY.32	0.000532
ORF8	51	A51V	gCt	gTt	1	1	AY.32	0.000532
ORF8	51	A51T	Gct	Act	1	1	AY.34	0.000097
ORF8	51	A51V	gCt	gTt	1	1	AY.35	0.000233
ORF8	51	A51S	Gct	Tct	1	1	AY.36	0.000148
ORF8	51	A51V	gCt	gTt	1	1	AY.37	0.000316
ORF8	51	A51G	gCt	gGt	1	1	AY.37	0.000316
ORF8	51	A51V	gCt	gTt	1	1	AY.38	0.000499
ORF8	51	A51T	Gct	Act	1	1	AY.39	0.000025
ORF8	51	A51D	gCt	gAt	1	1	AY.39	0.000025
ORF8	51	A51del1	gcT	gc-	1	1	AY.4	0.000002
ORF8	51	A51D	gCt	gAt	1	1	AY.4.2	0.000022
ORF8	51	A51V	gCt	gTt	1	1	AY.4.3	0.000842
ORF8	51	A51S	Gct	Tct	1	1	AY.4.4	0.000409
ORF8	51	A51del	GCT	---	1	1	AY.4.4	0.000409
ORF8	51	A51V	gCt	gTt	1	1	AY.4.4	0.000409
ORF8	51	A51V	gCt	gTt	1	1	AY.40	0.000964
ORF8	51	A51D	gCt	gAt	1	1	AY.41	0.000294
ORF8	51	A51D	gCt	gAt	1	1	AY.42	0.00004
ORF8	51	A51A	gcT	gcC	1	1	AY.43	0.000004
ORF8	51	A51I	GCt	ATt	1	1	AY.43	0.000004
ORF8	51	A51A	gcT	gcC	1	1	AY.44	0.000006
ORF8	51	A51F	GCt	TTt	1	1	AY.44	0.000006
ORF8	51	A51del	GCT	---	1	1	AY.46	0.000104
ORF8	51	A51V	gCt	gTt	1	1	AY.46.1	0.001027
ORF8	51	A51V	gCt	gTt	1	1	AY.46.2	0.000635
ORF8	51	A51V	gCt	gTt	1	1	AY.46.3	0.000934
ORF8	51	A51V	gCt	gTt	1	1	AY.46.5	0.000198
ORF8	51	A51A	gcT	gcC	1	1	AY.46.6	0.000072
ORF8	51	A51V	gCt	gTt	1	1	AY.48	0.000465
ORF8	51	A51A	gcT	gcC	1	1	AY.48	0.000465
ORF8	51	A51A	gcT	gcC	1	1	AY.5	0.000021
ORF8	51	A51del	GCT	---	1	1	AY.54	0.000095
ORF8	51	A51del2	gCT	g--	1	1	AY.54	0.000095
ORF8	51	A51A	gcT	gcC	1	1	AY.55	0.000917
ORF8	51	A51S	Gct	Tct	1	1	AY.55	0.000917
ORF8	51	A51D	gCt	gAt	1	1	AY.59	0.00053
ORF8	51	A51V	gCt	gTt	1	1	AY.62	0.000436
ORF8	51	A51V	gCt	gTt	1	1	AY.63	0.000387
ORF8	51	A51S	Gct	Tct	1	1	AY.65	0.000533
ORF8	51	A51A	gcT	gcC	1	1	AY.65	0.000533
ORF8	51	A51P	GcT	CcA	1	1	AY.67	0.000464
ORF8	51	A51S	Gct	Tct	1	1	AY.68	0.000274
ORF8	51	A51del	GCT	---	1	1	AY.69	0.000187
ORF8	51	A51V	gCt	gTt	1	1	AY.7.1	0.000113
ORF8	51	A51del	GCT	---	1	1	AY.74	0.000116
ORF8	51	A51V	gCt	gTt	1	1	AY.76	0.004831
ORF8	51	A51V	gCt	gTt	1	1	AY.79	0.001211
ORF8	51	A51V	gCt	gTt	1	1	AY.84	0.000437
ORF8	51	A51V	gCt	gTt	1	1	AY.87	0.000833
ORF8	51	A51del	GCT	---	1	1	AY.9	0.000068
ORF8	51	A51D	gCt	gAt	1	1	AY.9	0.000068
ORF8	51	A51D	gCt	gAt	1	1	AY.9.2	0.000037
ORF8	51	A51V	gCt	gTt	1	1	AY.91	0.00073
ORF8	51	A51S	Gct	Tct	1	1	AY.94	0.000443
ORF8	51	A51T	Gct	Act	1	1	AY.98	0.000079
ORF8	51	A51G	gCt	gGt	1	1	AY.98	0.000079
ORF8	51	A51A	gcT	gcC	1	1	AY.98	0.000079
ORF8	51	A51del	GCT	---	1	1	AY.98.1	0.000048
ORF8	51	A51S	GcT	TcG	1	1	AY.99	0.001049
ORF8	51	A51V	gCt	gTt	1	1	AY.99	0.001049
ORF8	51	A51del	GCT	---	1	1	AZ.2	0.000821
ORF8	51	A51P	Gct	Cct	1	1	B.1	0.000009
ORF8	51	A51G	gCt	gGt	1	1	B.1	0.000009
ORF8	51	A51A	gcT	gcC	1	1	B.1	0.000009
ORF8	51	A51T	Gct	Act	1	1	B.1	0.000009
ORF8	51	A51D	gCt	gAt	1	1	B.1.1	0.000018
ORF8	51	A51del1	gcT	gc-	1	1	B.1.1	0.000018
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.1	0.000327
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.129	0.009174
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.138	0.006061
ORF8	51	A51D	gCt	gAt	1	1	B.1.1.141	0.002012
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.161	0.003534
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.170	0.001247
ORF8	51	A51del	GCT	---	1	1	B.1.1.174	0.003378
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.176	0.000439
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.214	0.000055
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.216	0.00089
ORF8	51	A51del	GCT	---	1	1	B.1.1.216	0.00089
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.232	0.001815
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.237	0.005405
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.243	0.004082
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.244	0.015385
ORF8	51	A51del	GCT	---	1	1	B.1.1.25	0.000569
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.265	0.003155
ORF8	51	A51T	Gct	Act	1	1	B.1.1.265	0.003155
ORF8	51	A51del	GCT	---	1	1	B.1.1.269	0.001353
ORF8	51	A51A	gcT	gcC	1	1	B.1.1.28	0.000311
ORF8	51	A51S	GcT	TcA	1	1	B.1.1.282	0.011628
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.291	0.000742
ORF8	51	A51del	GCT	---	1	1	B.1.1.297	0.002237
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.304	0.002809
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.305	0.003861
ORF8	51	A51A	gcT	gcG	1	1	B.1.1.306	0.000438
ORF8	51	A51T	Gct	Act	1	1	B.1.1.306	0.000438
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.312	0.001912
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.317	0.000412
ORF8	51	A51del	GCT	---	1	1	B.1.1.322	0.008772
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.326	0.001761
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.326	0.001761
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.336	0.016667
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.348	0.000796
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.351	0.002793
ORF8	51	A51del	GCT	---	1	1	B.1.1.354	0.004386
ORF8	51	A51del	GCT	---	1	1	B.1.1.37	0.000193
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.37	0.000193
ORF8	51	A51D	gCt	gAt	1	1	B.1.1.39	0.00051
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.397	0.002252
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.404	0.015873
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.412	0.007634
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.416	0.000905
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.432	0.001266
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.46	0.004367
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.47	0.005348
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.486	0.001577
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.50	0.000679
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.515	0.02
ORF8	51	A51S	Gct	Tct	1	1	B.1.1.524	0.020833
ORF8	51	A51del	GCT	---	1	1	B.1.1.63	0.000386
ORF8	51	A51L	GCT	CTA	1	1	B.1.1.7	0.000001
ORF8	51	A51A	gcT	gcC	1	1	B.1.1.89	0.006061
ORF8	51	A51V	gCt	gTt	1	1	B.1.1.95	0.019608
ORF8	51	A51del	GCT	---	1	1	B.1.126	0.001276
ORF8	51	A51T	Gct	Act	1	1	B.1.139	0.000733
ORF8	51	A51V	gCt	gTt	1	1	B.1.147	0.000756
ORF8	51	A51V	gCt	gTt	1	1	B.1.157	0.002985
ORF8	51	A51V	gCt	gTt	1	1	B.1.160.31	0.008065
ORF8	51	A51V	gCt	gTt	1	1	B.1.160.8	0.001289
ORF8	51	A51A	gcT	gcA	1	1	B.1.177	0.000013
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.10	0.000878
ORF8	51	A51del	GCT	---	1	1	B.1.177.12	0.000152
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.12	0.000152
ORF8	51	A51S	Gct	Tct	1	1	B.1.177.12	0.000152
ORF8	51	A51S	Gct	Tct	1	1	B.1.177.15	0.000631
ORF8	51	A51S	Gct	Tct	1	1	B.1.177.21	0.000076
ORF8	51	A51S	Gct	Tct	1	1	B.1.177.44	0.000519
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.46	0.000918
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.51	0.004566
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.54	0.000606
ORF8	51	A51G	gCT	gGC	1	1	B.1.177.63	0.002703
ORF8	51	A51del	GCT	---	1	1	B.1.177.7	0.000165
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.72	0.00339
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.73	0.000566
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.8	0.000752
ORF8	51	A51V	gCt	gTt	1	1	B.1.177.80	0.001912
ORF8	51	A51A	gcT	gcC	1	1	B.1.177.81	0.000189
ORF8	51	A51T	Gct	Act	1	1	B.1.177.87	0.000728
ORF8	51	A51T	Gct	Act	1	1	B.1.189	0.004292
ORF8	51	A51del	GCT	---	1	1	B.1.195	0.005025
ORF8	51	A51P	Gct	Cct	1	1	B.1.2	0.000009
ORF8	51	A51A	gcT	gcC	1	1	B.1.221	0.000071
ORF8	51	A51D	gCt	gAt	1	1	B.1.221	0.000071
ORF8	51	A51V	gCt	gTt	1	1	B.1.239	0.001221
ORF8	51	A51V	gCt	gTt	1	1	B.1.240	0.000216
ORF8	51	A51D	gCt	gAt	1	1	B.1.240	0.000216
ORF8	51	A51T	GcT	AcC	1	1	B.1.243	0.00007
ORF8	51	A51S	Gct	Tct	1	1	B.1.243.1	0.022222
ORF8	51	A51A	gcT	gcC	1	1	B.1.258	0.000067
ORF8	51	A51del	GCT	---	1	1	B.1.258	0.000067
ORF8	51	A51del	GCT	---	1	1	B.1.258.12	0.007874
ORF8	51	A51V	gCt	gTt	1	1	B.1.258.14	0.00098
ORF8	51	A51del	GCT	---	1	1	B.1.258.9	0.005
ORF8	51	A51S	Gct	Tct	1	1	B.1.260	0.003344
ORF8	51	A51V	gCt	gTt	1	1	B.1.260	0.003344
ORF8	51	A51V	gCt	gTt	1	1	B.1.267	0.018519
ORF8	51	A51S	Gct	Tct	1	1	B.1.280	0.007143
ORF8	51	A51V	gCt	gTt	1	1	B.1.298	0.002114
ORF8	51	A51S	Gct	Tct	1	1	B.1.311	0.000275
ORF8	51	A51A	gcT	gcC	1	1	B.1.320	0.001245
ORF8	51	A51S	Gct	Tct	1	1	B.1.324	0.001605
ORF8	51	A51S	Gct	Tct	1	1	B.1.338	0.008621
ORF8	51	A51S	Gct	Tct	1	1	B.1.350	0.002933
ORF8	51	A51A	gcT	gcC	1	1	B.1.351	0.00003
ORF8	51	A51V	gCt	gTt	1	1	B.1.351.2	0.000303
ORF8	51	A51del	GCT	---	1	1	B.1.351.2	0.000303
ORF8	51	A51S	Gct	Tct	1	1	B.1.356	0.001727
ORF8	51	A51T	Gct	Act	1	1	B.1.36	0.000146
ORF8	51	A51A	gcT	gcC	1	1	B.1.36	0.000146
ORF8	51	A51V	gCt	gTt	1	1	B.1.36.17	0.000494
ORF8	51	A51V	gCt	gTt	1	1	B.1.36.27	0.000763
ORF8	51	A51S	Gct	Tct	1	1	B.1.367	0.000792
ORF8	51	A51V	gCt	gTt	1	1	B.1.369	0.000285
ORF8	51	A51S	Gct	Tct	1	1	B.1.375	0.00082
ORF8	51	A51V	gCt	gTt	1	1	B.1.375	0.00082
ORF8	51	A51V	gCt	gTt	1	1	B.1.396	0.000706
ORF8	51	A51A	gcT	gcC	1	1	B.1.398	0.002976
ORF8	51	A51V	gCt	gTt	1	1	B.1.399	0.001934
ORF8	51	A51V	gCt	gTt	1	1	B.1.400	0.000429
ORF8	51	A51V	gCt	gTt	1	1	B.1.403	0.003268
ORF8	51	A51S	Gct	Tct	1	1	B.1.411	0.003704
ORF8	51	A51V	gCt	gTt	1	1	B.1.415.1	0.007576
ORF8	51	A51A	gcT	gcC	1	1	B.1.426	0.001009
ORF8	51	A51S	Gct	Tct	1	1	B.1.427	0.00005
ORF8	51	A51S	Gct	Tct	1	1	B.1.428	0.00102
ORF8	51	A51D	gCt	gAt	1	1	B.1.429	0.000024
ORF8	51	A51T	Gct	Act	1	1	B.1.429	0.000024
ORF8	51	A51S	Gct	Tct	1	1	B.1.429	0.000024
ORF8	51	A51V	gCt	gTt	1	1	B.1.442	0.035714
ORF8	51	A51del	GCT	---	1	1	B.1.445	0.011765
ORF8	51	A51V	gCt	gTt	1	1	B.1.448	0.002625
ORF8	51	A51V	gCt	gTt	1	1	B.1.456	0.003268
ORF8	51	A51V	gCt	gTt	1	1	B.1.462	0.007246
ORF8	51	A51del	GCT	---	1	1	B.1.468	0.005714
ORF8	51	A51V	gCt	gTt	1	1	B.1.505	0.004386
ORF8	51	A51V	gCt	gTt	1	1	B.1.517.1	0.005263
ORF8	51	A51V	gCt	gTt	1	1	B.1.520	0.021739
ORF8	51	A51S	Gct	Tct	1	1	B.1.524	0.001406
ORF8	51	A51del1	Gct	-ct	1	1	B.1.526	0.000024
ORF8	51	A51T	Gct	Act	1	1	B.1.538	0.008065
ORF8	51	A51del	GCT	---	1	1	B.1.540	0.009709
ORF8	51	A51S	Gct	Tct	1	1	B.1.544	0.006024
ORF8	51	A51del	GCT	---	1	1	B.1.549	0.007194
ORF8	51	A51D	gCt	gAt	1	1	B.1.561	0.000397
ORF8	51	A51V	gCt	gTt	1	1	B.1.561	0.000397
ORF8	51	A51del	GCT	---	1	1	B.1.564	0.000426
ORF8	51	A51S	Gct	Tct	1	1	B.1.576	0.000907
ORF8	51	A51V	gCt	gTt	1	1	B.1.582	0.000491
ORF8	51	A51V	gCt	gTt	1	1	B.1.595	0.000261
ORF8	51	A51del	GCT	---	1	1	B.1.596	0.000087
ORF8	51	A51V	gCt	gTt	1	1	B.1.597	0.00463
ORF8	51	A51H	GCT	CAC	1	1	B.1.617.2	0.000004
ORF8	51	A51N	GCT	AAC	1	1	B.1.617.2	0.000004
ORF8	51	A51K	GCT	AAG	1	1	B.1.617.2	0.000004
ORF8	51	A51D	gCt	gAt	1	1	B.1.620	0.000946
ORF8	51	A51G	gCt	gGt	1	1	B.1.621	0.000089
ORF8	51	A51del	GCT	---	1	1	B.1.621	0.000089
ORF8	51	A51S	Gct	Tct	1	1	B.1.623	0.000536
ORF8	51	A51S	Gct	Tct	1	1	B.1.628	0.000352
ORF8	51	A51V	gCt	gTt	1	1	B.1.84	0.020833
ORF8	51	A51V	gCt	gTt	1	1	B.1.9.4	0.006135
ORF8	51	A51V	gCt	gTt	1	1	B.1.9.5	0.005682
ORF8	51	A51del	GCT	---	1	1	B.34	0.013699
ORF8	51	A51A	gcT	gcC	1	1	B.40	0.000364
ORF8	51	A51S	Gct	Tct	1	1	B.61	0.005747
ORF8	51	A51V	gCt	gTt	1	1	C.18	0.002591
ORF8	51	A51V	gCt	gTt	1	1	C.23	0.005814
ORF8	51	A51del	GCT	---	1	1	C.26	0.007353
ORF8	51	A51S	Gct	Tct	1	1	C.35	0.000774
ORF8	51	A51A	gcT	gcC	1	1	C.37	0.000116
ORF8	51	A51del	GCT	---	1	1	C.37	0.000116
ORF8	51	A51S	Gct	Tct	1	1	C.37.1	0.002618
ORF8	51	A51V	gCt	gTt	1	1	C.38	0.008065
ORF8	51	A51G	gCt	gGt	1	1	D.2	0.000075
ORF8	51	A51V	gCt	gTt	1	1	M.1	0.023256
ORF8	51	A51del	GCT	---	1	1	M.3	0.076923
ORF8	51	A51del	GCT	---	1	1	N.6	0.007092
ORF8	51	A51A	gcT	gcC	1	1	P.1	0.000016
ORF8	51	A51S	Gct	Tct	1	1	P.1.1	0.000318
ORF8	51	A51S	Gct	Tct	1	1	P.1.10	0.000269
ORF8	51	A51S	Gct	Tct	1	1	P.1.10.1	0.00813
ORF8	51	A51del	GCT	---	1	1	P.1.12	0.000484
ORF8	51	A51V	gCt	gTt	1	1	P.1.13	0.000898
ORF8	51	A51S	Gct	Tct	1	1	P.1.13	0.000898
ORF8	51	A51S	Gct	Tct	1	1	P.1.14	0.000048
ORF8	51	A51A	gcT	gcC	1	1	P.1.16	0.000374
ORF8	51	A51del	GCT	---	1	1	P.1.17	0.000162
ORF8	51	A51S	Gct	Tct	1	1	P.1.17	0.000162
ORF8	51	A51S	Gct	Tct	1	1	P.1.7	0.000319
ORF8	51	A51del	GCT	---	1	1	P.1.7	0.000319
ORF8	51	A51S	Gct	Tct	1	1	P.2	0.000187
ORF8	51	A51V	gCt	gTt	1	1	Q.3	0.000145
ORF8	51	A51del	GCT	---	1	1	R.1	0.00009
ORF8	51	A51V	gCt	gTt	1	1	W.2	0.004831

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.