CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 4 | L4P | nonsyn | cTt | cCt | 4032 | 4032 | 1 | 27903-27905 | |
ORF8 | 4 | L4F | nonsyn | Ctt | Ttt | 2259 | 2259 | 1 | 27903-27905 | |
ORF8 | 4 | L4del | del | CTT | --- | 535 | 535 | 1 | 27903-27905 | |
ORF8 | 4 | L4L | syn | ctT | ctC | 448 | 385 | 0.859375 | 27903-27905 | |
ORF8 | 4 | L4L | syn | ctT | ctA | 448 | 51 | 0.113839 | 27903-27905 | |
ORF8 | 4 | L4L | syn | ctT | ctG | 448 | 9 | 0.0200893 | 27903-27905 | |
ORF8 | 4 | L4L | syn | CtT | TtG | 448 | 2 | 0.00446429 | 27903-27905 | |
ORF8 | 4 | L4L | syn | CtT | TtA | 448 | 1 | 0.00223214 | 27903-27905 | |
ORF8 | 4 | L4R | nonsyn | cTt | cGt | 161 | 160 | 0.993789 | 27903-27905 | |
ORF8 | 4 | L4R | nonsyn | cTT | cGA | 161 | 1 | 0.00621118 | 27903-27905 | |
ORF8 | 4 | L4I | nonsyn | Ctt | Att | 154 | 154 | 1 | 27903-27905 | |
ORF8 | 4 | L4del1 | del | Ctt | -tt | 52 | 45 | 0.865385 | 27903-27905 | |
ORF8 | 4 | L4del1 | del | ctT | ct- | 52 | 4 | 0.0769231 | 27903-27905 | |
ORF8 | 4 | L4del1 | del | CtT | -tC | 52 | 2 | 0.0384615 | 27903-27905 | |
ORF8 | 4 | L4del1 | del | CTT | -NN | 52 | 1 | 0.0192308 | 27903-27905 | |
ORF8 | 4 | L4V | nonsyn | Ctt | Gtt | 18 | 18 | 1 | 27903-27905 | |
ORF8 | 4 | L4G | nonsyn | CTt | GGt | 16 | 16 | 1 | 27903-27905 | |
ORF8 | 4 | L4H | nonsyn | cTt | cAt | 13 | 13 | 1 | 27903-27905 | |
ORF8 | 4 | L4del2 | del | cTT | c-- | 12 | 5 | 0.416667 | 27903-27905 | |
ORF8 | 4 | L4del2 | del | CTt | --t | 12 | 4 | 0.333333 | 27903-27905 | |
ORF8 | 4 | L4del2 | del | CTT | --C | 12 | 2 | 0.166667 | 27903-27905 | |
ORF8 | 4 | L4del2 | del | CTT | --N | 12 | 1 | 0.0833333 | 27903-27905 | |
ORF8 | 4 | L4S | nonsyn | CTt | TCt | 11 | 6 | 0.545455 | 27903-27905 | |
ORF8 | 4 | L4S | nonsyn | CTT | TCC | 11 | 2 | 0.181818 | 27903-27905 | |
ORF8 | 4 | L4S | nonsyn | CTT | TCA | 11 | 2 | 0.181818 | 27903-27905 | |
ORF8 | 4 | L4S | nonsyn | CTt | AGt | 11 | 1 | 0.0909091 | 27903-27905 | |
ORF8 | 4 | L4X | nonsyn | CTT | TAA | 4 | 3 | 0.75 | 27903-27905 | |
ORF8 | 4 | L4A | nonsyn | CTT | GCC | 4 | 2 | 0.5 | 27903-27905 | |
ORF8 | 4 | L4A | nonsyn | CTT | GCA | 4 | 2 | 0.5 | 27903-27905 | |
ORF8 | 4 | L4X | nonsyn | CTT | TAG | 4 | 1 | 0.25 | 27903-27905 | |
ORF8 | 4 | L4Y | nonsyn | CTT | TAC | 3 | 2 | 0.666667 | 27903-27905 | |
ORF8 | 4 | L4Y | nonsyn | CTt | TAt | 3 | 1 | 0.333333 | 27903-27905 | |
ORF8 | 4 | L4D | nonsyn | CTT | GAC | 2 | 2 | 1 | 27903-27905 | |
ORF8 | 4 | L4E | nonsyn | CTT | GAA | 2 | 2 | 1 | 27903-27905 | |
ORF8 | 4 | L4N | nonsyn | CTt | AAt | 2 | 2 | 1 | 27903-27905 | |
ORF8 | 4 | L4Q | nonsyn | cTT | cAG | 2 | 1 | 0.5 | 27903-27905 | |
ORF8 | 4 | L4Q | nonsyn | cTT | cAA | 2 | 1 | 0.5 | 27903-27905 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 4 | L4P | cTt | cCt | 4032 | 4032 | All | 0.000771 |
ORF8 | 4 | L4P | cTt | cCt | 3625 | 3625 | B.1.1.519 | 0.143952 |
ORF8 | 4 | L4F | Ctt | Ttt | 2259 | 2259 | All | 0.000432 |
ORF8 | 4 | L4F | Ctt | Ttt | 727 | 727 | AY.4 | 0.001132 |
ORF8 | 4 | L4del | CTT | --- | 535 | 535 | All | 0.000102 |
ORF8 | 4 | L4L | ctT | ctC | 385 | 448 | All | 0.000074 |
ORF8 | 4 | L4L | ctT | ctA | 51 | 448 | All | 0.00001 |
ORF8 | 4 | L4L | ctT | ctG | 9 | 448 | All | 0.000002 |
ORF8 | 4 | L4L | CtT | TtG | 2 | 448 | All | 0 |
ORF8 | 4 | L4L | CtT | TtA | 1 | 448 | All | 0 |
ORF8 | 4 | L4F | Ctt | Ttt | 257 | 257 | B.1.617.2 | 0.000968 |
ORF8 | 4 | L4F | Ctt | Ttt | 217 | 217 | AY.43 | 0.000961 |
ORF8 | 4 | L4R | cTt | cGt | 160 | 161 | All | 0.000031 |
ORF8 | 4 | L4R | cTT | cGA | 1 | 161 | All | 0 |
ORF8 | 4 | L4I | Ctt | Att | 154 | 154 | All | 0.000029 |
ORF8 | 4 | L4L | ctT | ctC | 140 | 140 | AY.43 | 0.00062 |
ORF8 | 4 | L4F | Ctt | Ttt | 135 | 135 | AY.47 | 0.004199 |
ORF8 | 4 | L4P | cTt | cCt | 134 | 134 | AY.4 | 0.000209 |
ORF8 | 4 | L4F | Ctt | Ttt | 97 | 97 | B.1.1.7 | 0.000087 |
ORF8 | 4 | L4R | cTt | cGt | 96 | 96 | AY.4 | 0.000149 |
ORF8 | 4 | L4F | Ctt | Ttt | 93 | 93 | B.1.575 | 0.028216 |
ORF8 | 4 | L4P | cTt | cCt | 80 | 80 | AY.39 | 0.001977 |
ORF8 | 4 | L4del | CTT | --- | 78 | 78 | AY.4 | 0.000121 |
ORF8 | 4 | L4del | CTT | --- | 77 | 77 | B.1.1.7 | 0.000069 |
ORF8 | 4 | L4L | ctT | ctC | 54 | 71 | B.1.1.7 | 0.000048 |
ORF8 | 4 | L4L | ctT | ctA | 11 | 71 | B.1.1.7 | 0.00001 |
ORF8 | 4 | L4L | ctT | ctG | 6 | 71 | B.1.1.7 | 0.000005 |
ORF8 | 4 | L4del1 | Ctt | -tt | 45 | 52 | All | 0.000009 |
ORF8 | 4 | L4del1 | ctT | ct- | 4 | 52 | All | 0.000001 |
ORF8 | 4 | L4del1 | CtT | -tC | 2 | 52 | All | 0 |
ORF8 | 4 | L4del1 | CTT | -NN | 1 | 52 | All | 0 |
ORF8 | 4 | L4F | Ctt | Ttt | 49 | 49 | B.1 | 0.000449 |
ORF8 | 4 | L4L | ctT | ctC | 42 | 43 | AY.44 | 0.000256 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 43 | AY.44 | 0.000006 |
ORF8 | 4 | L4L | ctT | ctC | 38 | 39 | B.1.617.2 | 0.000143 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 39 | B.1.617.2 | 0.000004 |
ORF8 | 4 | L4del | CTT | --- | 38 | 38 | AY.29 | 0.000599 |
ORF8 | 4 | L4del | CTT | --- | 37 | 37 | P.1 | 0.000583 |
ORF8 | 4 | L4F | Ctt | Ttt | 36 | 36 | B.1.1 | 0.000653 |
ORF8 | 4 | L4del | CTT | --- | 35 | 35 | B.1.1.318 | 0.010561 |
ORF8 | 4 | L4del | CTT | --- | 35 | 35 | B.1.243 | 0.002435 |
ORF8 | 4 | L4F | Ctt | Ttt | 34 | 34 | AY.5 | 0.000702 |
ORF8 | 4 | L4F | Ctt | Ttt | 32 | 32 | AY.39 | 0.000791 |
ORF8 | 4 | L4F | Ctt | Ttt | 31 | 31 | AY.44 | 0.000189 |
ORF8 | 4 | L4del | CTT | --- | 29 | 29 | B.1.399 | 0.056093 |
ORF8 | 4 | L4F | Ctt | Ttt | 28 | 28 | B.1.240.2 | 0.848485 |
ORF8 | 4 | L4F | Ctt | Ttt | 27 | 27 | AY.103 | 0.000168 |
ORF8 | 4 | L4P | cTt | cCt | 27 | 27 | B.1.1 | 0.00049 |
ORF8 | 4 | L4F | Ctt | Ttt | 27 | 27 | B.1.214.2 | 0.016187 |
ORF8 | 4 | L4F | Ctt | Ttt | 26 | 26 | AY.25 | 0.000156 |
ORF8 | 4 | L4L | ctT | ctC | 25 | 25 | B.1.1.318 | 0.007544 |
ORF8 | 4 | L4F | Ctt | Ttt | 23 | 23 | AY.6 | 0.000946 |
ORF8 | 4 | L4F | Ctt | Ttt | 23 | 23 | P.1 | 0.000362 |
ORF8 | 4 | L4I | Ctt | Att | 21 | 21 | P.1 | 0.000331 |
ORF8 | 4 | L4F | Ctt | Ttt | 20 | 20 | AY.102 | 0.00053 |
ORF8 | 4 | L4I | Ctt | Att | 20 | 20 | B.1.588 | 0.018198 |
ORF8 | 4 | L4L | ctT | ctA | 19 | 19 | B.1.427 | 0.000959 |
ORF8 | 4 | L4V | Ctt | Gtt | 18 | 18 | All | 0.000003 |
ORF8 | 4 | L4F | Ctt | Ttt | 18 | 18 | AY.9.2 | 0.000661 |
ORF8 | 4 | L4P | cTt | cCt | 18 | 18 | B.1.1.7 | 0.000016 |
ORF8 | 4 | L4del | CTT | --- | 17 | 17 | B | 0.002173 |
ORF8 | 4 | L4G | CTt | GGt | 16 | 16 | All | 0.000003 |
ORF8 | 4 | L4P | cTt | cCt | 16 | 16 | B.1 | 0.000147 |
ORF8 | 4 | L4F | Ctt | Ttt | 16 | 16 | B.1.258 | 0.001065 |
ORF8 | 4 | L4F | Ctt | Ttt | 14 | 14 | AY.29 | 0.000221 |
ORF8 | 4 | L4F | Ctt | Ttt | 14 | 14 | B.1.160 | 0.000437 |
ORF8 | 4 | L4P | cTt | cCt | 14 | 14 | P.1.15 | 0.003253 |
ORF8 | 4 | L4H | cTt | cAt | 13 | 13 | All | 0.000002 |
ORF8 | 4 | L4del | CTT | --- | 13 | 13 | AZ.2 | 0.010673 |
ORF8 | 4 | L4del1 | Ctt | -tt | 13 | 13 | B.1.1.28 | 0.004046 |
ORF8 | 4 | L4del | CTT | --- | 13 | 13 | B.1.2 | 0.000114 |
ORF8 | 4 | L4I | Ctt | Att | 13 | 13 | B.1.2 | 0.000114 |
ORF8 | 4 | L4R | cTt | cGt | 13 | 13 | B.1.243 | 0.000905 |
ORF8 | 4 | L4del2 | cTT | c-- | 5 | 12 | All | 0.000001 |
ORF8 | 4 | L4del2 | CTt | --t | 4 | 12 | All | 0.000001 |
ORF8 | 4 | L4del2 | CTT | --C | 2 | 12 | All | 0 |
ORF8 | 4 | L4del2 | CTT | --N | 1 | 12 | All | 0 |
ORF8 | 4 | L4F | Ctt | Ttt | 12 | 12 | AY.3 | 0.000119 |
ORF8 | 4 | L4F | Ctt | Ttt | 12 | 12 | B.1.1.63 | 0.00463 |
ORF8 | 4 | L4F | Ctt | Ttt | 12 | 12 | B.1.221 | 0.000852 |
ORF8 | 4 | L4F | Ctt | Ttt | 12 | 12 | B.1.234 | 0.001583 |
ORF8 | 4 | L4F | Ctt | Ttt | 12 | 12 | B.1.243 | 0.000835 |
ORF8 | 4 | L4P | cTt | cCt | 12 | 12 | B.1.596 | 0.001046 |
ORF8 | 4 | L4S | CTt | TCt | 6 | 11 | All | 0.000001 |
ORF8 | 4 | L4S | CTT | TCC | 2 | 11 | All | 0 |
ORF8 | 4 | L4S | CTT | TCA | 2 | 11 | All | 0 |
ORF8 | 4 | L4S | CTt | AGt | 1 | 11 | All | 0 |
ORF8 | 4 | L4L | ctT | ctC | 9 | 11 | AY.102 | 0.000239 |
ORF8 | 4 | L4L | ctT | ctA | 2 | 11 | AY.102 | 0.000053 |
ORF8 | 4 | L4L | ctT | ctC | 7 | 11 | AY.3 | 0.00007 |
ORF8 | 4 | L4L | ctT | ctG | 1 | 11 | AY.3 | 0.00001 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 11 | AY.3 | 0.00001 |
ORF8 | 4 | L4L | CtT | TtG | 1 | 11 | AY.3 | 0.00001 |
ORF8 | 4 | L4L | CtT | TtA | 1 | 11 | AY.3 | 0.00001 |
ORF8 | 4 | L4R | cTt | cGt | 11 | 11 | B.1.1.302 | 0.022822 |
ORF8 | 4 | L4P | cTt | cCt | 11 | 11 | B.1.617.2 | 0.000041 |
ORF8 | 4 | L4F | Ctt | Ttt | 10 | 10 | AY.119 | 0.000353 |
ORF8 | 4 | L4I | Ctt | Att | 10 | 10 | AY.47 | 0.000311 |
ORF8 | 4 | L4L | ctT | ctC | 8 | 10 | B.1.2 | 0.00007 |
ORF8 | 4 | L4L | ctT | ctG | 1 | 10 | B.1.2 | 0.000009 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 10 | B.1.2 | 0.000009 |
ORF8 | 4 | L4F | Ctt | Ttt | 10 | 10 | B.1.470 | 0.014045 |
ORF8 | 4 | L4I | Ctt | Att | 9 | 9 | AY.25 | 0.000054 |
ORF8 | 4 | L4R | cTt | cGt | 9 | 9 | AY.4.2 | 0.000195 |
ORF8 | 4 | L4del | CTT | --- | 9 | 9 | AY.44 | 0.000055 |
ORF8 | 4 | L4F | Ctt | Ttt | 9 | 9 | AY.46 | 0.000937 |
ORF8 | 4 | L4del | CTT | --- | 9 | 9 | B.1 | 0.000082 |
ORF8 | 4 | L4I | Ctt | Att | 9 | 9 | B.1 | 0.000082 |
ORF8 | 4 | L4F | Ctt | Ttt | 9 | 9 | B.1.1.50 | 0.00611 |
ORF8 | 4 | L4I | Ctt | Att | 9 | 9 | B.1.320 | 0.011208 |
ORF8 | 4 | L4G | CTt | GGt | 9 | 9 | B.1.525 | 0.001018 |
ORF8 | 4 | L4F | Ctt | Ttt | 9 | 9 | B.1.526 | 0.000212 |
ORF8 | 4 | L4F | Ctt | Ttt | 8 | 8 | AY.105 | 0.005145 |
ORF8 | 4 | L4R | cTt | cGt | 8 | 8 | AY.120 | 0.000297 |
ORF8 | 4 | L4F | Ctt | Ttt | 8 | 8 | AY.26 | 0.000226 |
ORF8 | 4 | L4L | ctT | ctC | 7 | 8 | AY.4 | 0.000011 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 8 | AY.4 | 0.000002 |
ORF8 | 4 | L4P | cTt | cCt | 8 | 8 | B.1.1.317 | 0.003294 |
ORF8 | 4 | L4F | Ctt | Ttt | 8 | 8 | B.1.351 | 0.000238 |
ORF8 | 4 | L4F | Ctt | Ttt | 7 | 7 | A.2.5 | 0.003493 |
ORF8 | 4 | L4P | cTt | cCt | 7 | 7 | AY.3 | 0.00007 |
ORF8 | 4 | L4del | CTT | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF8 | 4 | L4H | cTt | cAt | 7 | 7 | B.1.1.7 | 0.000006 |
ORF8 | 4 | L4F | Ctt | Ttt | 7 | 7 | B.1.2 | 0.000062 |
ORF8 | 4 | L4del1 | Ctt | -tt | 7 | 7 | B.1.617.2 | 0.000026 |
ORF8 | 4 | L4del | CTT | --- | 7 | 7 | B.1.617.2 | 0.000026 |
ORF8 | 4 | L4F | Ctt | Ttt | 6 | 6 | AY.116.1 | 0.001869 |
ORF8 | 4 | L4F | Ctt | Ttt | 6 | 6 | AY.12 | 0.001896 |
ORF8 | 4 | L4del | CTT | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF8 | 4 | L4F | Ctt | Ttt | 6 | 6 | AY.42 | 0.000241 |
ORF8 | 4 | L4del | CTT | --- | 6 | 6 | B.1.1 | 0.000109 |
ORF8 | 4 | L4V | Ctt | Gtt | 6 | 6 | B.1.1.7 | 0.000005 |
ORF8 | 4 | L4I | Ctt | Att | 6 | 6 | B.1.1.7 | 0.000005 |
ORF8 | 4 | L4G | CTt | GGt | 6 | 6 | B.1.1.7 | 0.000005 |
ORF8 | 4 | L4P | cTt | cCt | 6 | 6 | B.1.2 | 0.000053 |
ORF8 | 4 | L4del | CTT | --- | 6 | 6 | B.1.243.2 | 0.086957 |
ORF8 | 4 | L4F | Ctt | Ttt | 6 | 6 | B.1.516 | 0.011742 |
ORF8 | 4 | L4del1 | Ctt | -tt | 6 | 6 | B.1.617.1 | 0.000774 |
ORF8 | 4 | L4L | ctT | ctC | 6 | 6 | P.1.12 | 0.002904 |
ORF8 | 4 | L4del | CTT | --- | 5 | 5 | AY.3 | 0.00005 |
ORF8 | 4 | L4del | CTT | --- | 5 | 5 | AY.3.1 | 0.000426 |
ORF8 | 4 | L4P | cTt | cCt | 5 | 5 | AY.43 | 0.000022 |
ORF8 | 4 | L4R | cTt | cGt | 5 | 5 | AY.5 | 0.000103 |
ORF8 | 4 | L4F | Ctt | Ttt | 5 | 5 | AY.59 | 0.002648 |
ORF8 | 4 | L4P | cTt | cCt | 5 | 5 | B.1.1.28 | 0.001556 |
ORF8 | 4 | L4F | Ctt | Ttt | 5 | 5 | B.1.1.46 | 0.021834 |
ORF8 | 4 | L4del | CTT | --- | 5 | 5 | B.1.1.519 | 0.000199 |
ORF8 | 4 | L4L | ctT | ctC | 5 | 5 | B.1.177 | 0.000066 |
ORF8 | 4 | L4F | Ctt | Ttt | 5 | 5 | B.1.177.21 | 0.000382 |
ORF8 | 4 | L4del | CTT | --- | 5 | 5 | B.1.526 | 0.000118 |
ORF8 | 4 | L4P | cTt | cCt | 5 | 5 | R.1 | 0.00045 |
ORF8 | 4 | L4F | Ctt | Ttt | 4 | 4 | 0.222222 | |
ORF8 | 4 | L4A | CTT | GCA | 2 | 4 | 0.111111 | |
ORF8 | 4 | L4A | CTT | GCC | 2 | 4 | 0.111111 | |
ORF8 | 4 | L4S | CTT | TCA | 2 | 4 | 0.111111 | |
ORF8 | 4 | L4S | CTT | TCC | 2 | 4 | 0.111111 | |
ORF8 | 4 | L4X | CTT | TAA | 3 | 4 | All | 0.000001 |
ORF8 | 4 | L4A | CTT | GCC | 2 | 4 | All | 0 |
ORF8 | 4 | L4A | CTT | GCA | 2 | 4 | All | 0 |
ORF8 | 4 | L4X | CTT | TAG | 1 | 4 | All | 0 |
ORF8 | 4 | L4del | CTT | --- | 4 | 4 | AY.103 | 0.000025 |
ORF8 | 4 | L4del1 | Ctt | -tt | 4 | 4 | AY.119 | 0.000141 |
ORF8 | 4 | L4L | ctT | ctC | 3 | 4 | AY.25 | 0.000018 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 4 | AY.25 | 0.000006 |
ORF8 | 4 | L4F | Ctt | Ttt | 4 | 4 | AY.39.1 | 0.000158 |
ORF8 | 4 | L4R | cTt | cGt | 4 | 4 | AY.6 | 0.000165 |
ORF8 | 4 | L4del1 | Ctt | -tt | 3 | 4 | B.1.1 | 0.000054 |
ORF8 | 4 | L4L | ctT | ctA | 3 | 4 | B.1.1 | 0.000054 |
ORF8 | 4 | L4L | CtT | TtG | 1 | 4 | B.1.1 | 0.000018 |
ORF8 | 4 | L4del1 | CTT | -NN | 1 | 4 | B.1.1 | 0.000018 |
ORF8 | 4 | L4del | CTT | --- | 4 | 4 | B.1.1.214 | 0.000222 |
ORF8 | 4 | L4P | cTt | cCt | 4 | 4 | B.1.1.222 | 0.000816 |
ORF8 | 4 | L4S | CTt | TCt | 4 | 4 | B.1.1.318 | 0.001207 |
ORF8 | 4 | L4F | Ctt | Ttt | 4 | 4 | B.1.177 | 0.000053 |
ORF8 | 4 | L4P | cTt | cCt | 4 | 4 | B.1.258 | 0.000266 |
ORF8 | 4 | L4I | Ctt | Att | 4 | 4 | B.1.427 | 0.000202 |
ORF8 | 4 | L4F | Ctt | Ttt | 4 | 4 | B.1.595 | 0.001044 |
ORF8 | 4 | L4F | Ctt | Ttt | 4 | 4 | C.36 | 0.003643 |
ORF8 | 4 | L4I | Ctt | Att | 4 | 4 | P.1.17 | 0.000647 |
ORF8 | 4 | L4Y | CTT | TAC | 2 | 3 | All | 0 |
ORF8 | 4 | L4Y | CTt | TAt | 1 | 3 | All | 0 |
ORF8 | 4 | L4P | cTt | cCt | 3 | 3 | AY.102 | 0.00008 |
ORF8 | 4 | L4del | CTT | --- | 3 | 3 | AY.25 | 0.000018 |
ORF8 | 4 | L4L | ctT | ctA | 3 | 3 | AY.27 | 0.000194 |
ORF8 | 4 | L4L | ctT | ctC | 3 | 3 | AY.29 | 0.000047 |
ORF8 | 4 | L4del | CTT | --- | 3 | 3 | AY.37 | 0.000948 |
ORF8 | 4 | L4I | Ctt | Att | 3 | 3 | AY.4 | 0.000005 |
ORF8 | 4 | L4P | cTt | cCt | 3 | 3 | AY.42 | 0.000121 |
ORF8 | 4 | L4I | Ctt | Att | 3 | 3 | AY.44 | 0.000018 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | AY.46.6 | 0.000217 |
ORF8 | 4 | L4del | CTT | --- | 3 | 3 | AY.48 | 0.001395 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | AY.92 | 0.000862 |
ORF8 | 4 | L4L | ctT | ctC | 3 | 3 | B.1 | 0.000027 |
ORF8 | 4 | L4P | cTt | cCt | 3 | 3 | B.1.1.288 | 0.005747 |
ORF8 | 4 | L4P | cTt | cCt | 3 | 3 | B.1.1.306 | 0.001315 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | B.1.1.416 | 0.002715 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | B.1.1.519 | 0.000119 |
ORF8 | 4 | L4del2 | CTt | --t | 3 | 3 | B.1.1.7 | 0.000003 |
ORF8 | 4 | L4del1 | Ctt | -tt | 2 | 3 | B.1.1.7 | 0.000002 |
ORF8 | 4 | L4del1 | ctT | ct- | 1 | 3 | B.1.1.7 | 0.000001 |
ORF8 | 4 | L4del | CTT | --- | 3 | 3 | B.1.126 | 0.003827 |
ORF8 | 4 | L4P | cTt | cCt | 3 | 3 | B.1.126 | 0.003827 |
ORF8 | 4 | L4del1 | Ctt | -tt | 3 | 3 | B.1.240.2 | 0.090909 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | B.1.405 | 0.037037 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | B.1.427 | 0.000151 |
ORF8 | 4 | L4del | CTT | --- | 3 | 3 | B.1.509 | 0.002597 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | B.1.621 | 0.000266 |
ORF8 | 4 | L4F | Ctt | Ttt | 3 | 3 | C.37 | 0.000348 |
ORF8 | 4 | L4V | Ctt | Gtt | 3 | 3 | P.1 | 0.000047 |
ORF8 | 4 | L4E | CTT | GAA | 2 | 2 | 0.111111 | |
ORF8 | 4 | L4X | CTT | TAA | 2 | 2 | 0.111111 | |
ORF8 | 4 | L4D | CTT | GAC | 2 | 2 | 0.111111 | |
ORF8 | 4 | L4Y | CTT | TAC | 2 | 2 | 0.111111 | |
ORF8 | 4 | L4del2 | CTT | --C | 2 | 2 | 0.111111 | |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | A.2.2 | 0.003378 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 2 | A.2.5.1 | 0.004808 |
ORF8 | 4 | L4R | cTT | cGA | 1 | 2 | A.2.5.1 | 0.004808 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | A.2.5.2 | 0.003145 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AD.2 | 0.000438 |
ORF8 | 4 | L4D | CTT | GAC | 2 | 2 | All | 0 |
ORF8 | 4 | L4E | CTT | GAA | 2 | 2 | All | 0 |
ORF8 | 4 | L4N | CTt | AAt | 2 | 2 | All | 0 |
ORF8 | 4 | L4Q | cTT | cAG | 1 | 2 | All | 0 |
ORF8 | 4 | L4Q | cTT | cAA | 1 | 2 | All | 0 |
ORF8 | 4 | L4V | Ctt | Gtt | 2 | 2 | AY.100 | 0.000092 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | AY.103 | 0.000012 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | AY.110 | 0.000225 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.113 | 0.000285 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | AY.113 | 0.000285 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.116 | 0.000574 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | AY.23 | 0.000139 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.23 | 0.000139 |
ORF8 | 4 | L4Q | cTT | cAA | 1 | 2 | AY.3 | 0.00001 |
ORF8 | 4 | L4Q | cTT | cAG | 1 | 2 | AY.3 | 0.00001 |
ORF8 | 4 | L4X | CTT | TAA | 1 | 2 | AY.3 | 0.00001 |
ORF8 | 4 | L4X | CTT | TAG | 1 | 2 | AY.3 | 0.00001 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | AY.3.1 | 0.000171 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.33 | 0.000134 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.34.1 | 0.00102 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | AY.39 | 0.000049 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.4.2 | 0.000043 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | AY.4.2 | 0.000043 |
ORF8 | 4 | L4R | cTt | cGt | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.42 | 0.00008 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 4 | L4R | cTt | cGt | 2 | 2 | AY.43 | 0.000009 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.47 | 0.000062 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AY.70 | 0.000417 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.77 | 0.002255 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.89 | 0.009804 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | AY.92 | 0.000575 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | AY.98.1 | 0.000097 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | AZ.6 | 0.016807 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B | 0.000256 |
ORF8 | 4 | L4del2 | cTT | c-- | 2 | 2 | B.1 | 0.000018 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.1 | 0.000036 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | B.1.1.161 | 0.007067 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.1.214 | 0.000111 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | B.1.1.220 | 0.003717 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.1.222 | 0.000408 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | B.1.1.306 | 0.000877 |
ORF8 | 4 | L4del1 | CtT | -tC | 2 | 2 | B.1.1.318 | 0.000604 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.1.33 | 0.000842 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.1.363 | 0.011976 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.1.368 | 0.006173 |
ORF8 | 4 | L4S | CTt | TCt | 2 | 2 | B.1.1.519 | 0.000079 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.1.61 | 0.017544 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | B.1.110.3 | 0.001437 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.14 | 0.035088 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.189 | 0.008584 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.222 | 0.003384 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | B.1.243 | 0.000139 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | B.1.258.22 | 0.005333 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.305 | 0.004301 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | B.1.362 | 0.003082 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.362 | 0.003082 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.369 | 0.00057 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | B.1.429 | 0.000047 |
ORF8 | 4 | L4del1 | Ctt | -tt | 2 | 2 | B.1.575 | 0.000607 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.609 | 0.000959 |
ORF8 | 4 | L4I | Ctt | Att | 2 | 2 | B.1.617.2 | 0.000008 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | B.1.625 | 0.004706 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | B.1.637 | 0.000146 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | C.35 | 0.001548 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | N.6 | 0.014184 |
ORF8 | 4 | L4H | cTt | cAt | 2 | 2 | P.1 | 0.000032 |
ORF8 | 4 | L4R | cTt | cGt | 2 | 2 | P.1 | 0.000032 |
ORF8 | 4 | L4P | cTt | cCt | 2 | 2 | P.1 | 0.000032 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | P.1 | 0.000032 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | P.1.10 | 0.000539 |
ORF8 | 4 | L4del | CTT | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | P.1.7 | 0.000639 |
ORF8 | 4 | L4L | ctT | ctC | 2 | 2 | P.4 | 0.007605 |
ORF8 | 4 | L4F | Ctt | Ttt | 2 | 2 | Q.8 | 0.00033 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | A | 0.000387 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | A.2.5 | 0.000499 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | A.2.5.1 | 0.004808 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | A.28 | 0.002646 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | AD.2 | 0.000219 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.107 | 0.000466 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.107 | 0.000466 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.12 | 0.000316 |
ORF8 | 4 | L4H | cTt | cAt | 1 | 1 | AY.13 | 0.000161 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | AY.14 | 0.000088 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.19 | 0.00114 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.24 | 0.000431 |
ORF8 | 4 | L4del2 | cTT | c-- | 1 | 1 | AY.25 | 0.000006 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.27 | 0.000065 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | AY.29 | 0.000016 |
ORF8 | 4 | L4Y | CTt | TAt | 1 | 1 | AY.3 | 0.00001 |
ORF8 | 4 | L4H | cTt | cAt | 1 | 1 | AY.3 | 0.00001 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.32 | 0.000532 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.36 | 0.000148 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.38 | 0.000499 |
ORF8 | 4 | L4del1 | Ctt | -tt | 1 | 1 | AY.39 | 0.000025 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.39 | 0.000025 |
ORF8 | 4 | L4H | cTt | cAt | 1 | 1 | AY.39 | 0.000025 |
ORF8 | 4 | L4del1 | Ctt | -tt | 1 | 1 | AY.4 | 0.000002 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | AY.4 | 0.000002 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.4.2 | 0.000022 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.4.5 | 0.000107 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.42 | 0.00004 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 4 | L4del1 | Ctt | -tt | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 4 | L4H | cTt | cAt | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.45 | 0.000122 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.46 | 0.000104 |
ORF8 | 4 | L4del1 | Ctt | -tt | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.5 | 0.000021 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.50 | 0.000799 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.53 | 0.000288 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.55 | 0.000917 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.66 | 0.00107 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | AY.69 | 0.000187 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.74 | 0.000116 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | AY.75.1 | 0.00018 |
ORF8 | 4 | L4del2 | cTT | c-- | 1 | 1 | AY.84 | 0.000437 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.85 | 0.000427 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.91 | 0.00073 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | AY.98 | 0.000079 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | AY.98.1 | 0.000048 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AZ.3 | 0.00152 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | AZ.5 | 0.003509 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B | 0.000128 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B | 0.000128 |
ORF8 | 4 | L4del1 | ctT | ct- | 1 | 1 | B.1 | 0.000009 |
ORF8 | 4 | L4N | CTt | AAt | 1 | 1 | B.1 | 0.000009 |
ORF8 | 4 | L4S | CTt | AGt | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.121 | 0.002427 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | B.1.1.141 | 0.002012 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.158 | 0.012195 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.175 | 0.076923 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.1.210 | 0.005714 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.236 | 0.006897 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.270 | 0.010309 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.1.284 | 0.000107 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.291 | 0.000742 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.306 | 0.000438 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.1.318 | 0.000302 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.1.336 | 0.016667 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.1.37 | 0.000193 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.1.416 | 0.000905 |
ORF8 | 4 | L4del2 | CTT | --N | 1 | 1 | B.1.1.44 | 0.00241 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.50 | 0.000679 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.1.507 | 0.008696 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | B.1.160 | 0.000031 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF8 | 4 | L4L | ctT | ctG | 1 | 1 | B.1.170 | 0.00431 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | B.1.177.21 | 0.000076 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.177.43 | 0.001477 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.177.5 | 0.001242 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.177.54 | 0.000606 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.177.63 | 0.002703 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 4 | L4del1 | ctT | ct- | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.232 | 0.000537 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | B.1.240 | 0.000216 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.241 | 0.000812 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.243 | 0.00007 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.258.3 | 0.001675 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.311 | 0.000275 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | B.1.351 | 0.00003 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.36 | 0.000146 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | B.1.36 | 0.000146 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.36.18 | 0.00042 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.36.9 | 0.003215 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | B.1.361 | 0.001289 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.378 | 0.006849 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.397 | 0.004854 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.399 | 0.001934 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | B.1.400 | 0.000429 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.402 | 0.009804 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.416 | 0.001269 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.422 | 0.000812 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.427 | 0.00005 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.429 | 0.000024 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.436 | 0.001029 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.439 | 0.005917 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.503 | 0.002488 |
ORF8 | 4 | L4V | Ctt | Gtt | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.526 | 0.000024 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.530 | 0.007143 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | B.1.568 | 0.001111 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.568 | 0.001111 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.575 | 0.000303 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.578 | 0.017857 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.582 | 0.000491 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | B.1.609 | 0.000479 |
ORF8 | 4 | L4N | CTt | AAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 4 | L4del2 | cTT | c-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | B.1.620 | 0.000946 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.620 | 0.000946 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF8 | 4 | L4P | cTt | cCt | 1 | 1 | B.1.623 | 0.000536 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | B.1.628 | 0.000352 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF8 | 4 | L4G | CTt | GGt | 1 | 1 | B.1.636 | 0.006711 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | C.1 | 0.002392 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | C.14 | 0.004329 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | C.26 | 0.007353 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | C.37 | 0.000116 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | D.2 | 0.000075 |
ORF8 | 4 | L4del1 | Ctt | -tt | 1 | 1 | P.1 | 0.000016 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | P.1.10 | 0.000269 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 4 | L4I | Ctt | Att | 1 | 1 | P.1.14 | 0.000048 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | P.1.14 | 0.000048 |
ORF8 | 4 | L4L | ctT | ctA | 1 | 1 | P.1.14 | 0.000048 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 4 | L4R | cTt | cGt | 1 | 1 | P.1.2 | 0.001156 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | P.2 | 0.000187 |
ORF8 | 4 | L4F | Ctt | Ttt | 1 | 1 | P.3 | 0.001595 |
ORF8 | 4 | L4L | ctT | ctC | 1 | 1 | Q.1 | 0.000126 |
ORF8 | 4 | L4del1 | ctT | ct- | 1 | 1 | Q.4 | 0.000455 |
ORF8 | 4 | L4del2 | CTt | --t | 1 | 1 | Q.8 | 0.000165 |
ORF8 | 4 | L4del | CTT | --- | 1 | 1 | V.2 | 0.032258 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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