CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 32 | V32L | nonsyn | Gta | Tta | 7437 | 5630 | 0.757026 | 27987-27989 | |
ORF8 | 32 | V32L | nonsyn | Gta | Cta | 7437 | 1801 | 0.242168 | 27987-27989 | |
ORF8 | 32 | V32L | nonsyn | GtA | TtG | 7437 | 4 | 0.000537851 | 27987-27989 | |
ORF8 | 32 | V32L | nonsyn | GtA | CtG | 7437 | 2 | 0.000268926 | 27987-27989 | |
ORF8 | 32 | V32A | nonsyn | gTa | gCa | 588 | 586 | 0.996599 | 27987-27989 | |
ORF8 | 32 | V32A | nonsyn | gTA | gCT | 588 | 2 | 0.00340136 | 27987-27989 | |
ORF8 | 32 | V32del | del | GTA | --- | 546 | 546 | 1 | 27987-27989 | |
ORF8 | 32 | V32I | nonsyn | Gta | Ata | 461 | 461 | 1 | 27987-27989 | |
ORF8 | 32 | V32V | syn | gtA | gtG | 387 | 355 | 0.917313 | 27987-27989 | |
ORF8 | 32 | V32V | syn | gtA | gtT | 387 | 30 | 0.0775194 | 27987-27989 | |
ORF8 | 32 | V32V | syn | gtA | gtC | 387 | 2 | 0.00516796 | 27987-27989 | |
ORF8 | 32 | V32del1 | del | Gta | -ta | 125 | 112 | 0.896 | 27987-27989 | |
ORF8 | 32 | V32del1 | del | gtA | gt- | 125 | 13 | 0.104 | 27987-27989 | |
ORF8 | 32 | V32del2 | del | gTA | g-- | 15 | 14 | 0.933333 | 27987-27989 | |
ORF8 | 32 | V32del2 | del | GTa | --a | 15 | 1 | 0.0666667 | 27987-27989 | |
ORF8 | 32 | V32M | nonsyn | GtA | AtG | 9 | 9 | 1 | 27987-27989 | |
ORF8 | 32 | V32E | nonsyn | gTa | gAa | 8 | 8 | 1 | 27987-27989 | |
ORF8 | 32 | V32G | nonsyn | gTa | gGa | 4 | 4 | 1 | 27987-27989 | |
ORF8 | 32 | V32T | nonsyn | GTa | ACa | 3 | 2 | 0.666667 | 27987-27989 | |
ORF8 | 32 | V32T | nonsyn | GTA | ACT | 3 | 1 | 0.333333 | 27987-27989 | |
ORF8 | 32 | V32K | nonsyn | GTa | AAa | 1 | 1 | 1 | 27987-27989 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 32 | V32L | Gta | Tta | 5630 | 7437 | All | 0.001077 |
ORF8 | 32 | V32L | Gta | Cta | 1801 | 7437 | All | 0.000344 |
ORF8 | 32 | V32L | GtA | TtG | 4 | 7437 | All | 0.000001 |
ORF8 | 32 | V32L | GtA | CtG | 2 | 7437 | All | 0 |
ORF8 | 32 | V32L | Gta | Tta | 1850 | 1850 | B.1.232 | 0.994089 |
ORF8 | 32 | V32L | Gta | Cta | 1624 | 1659 | B.1.429 | 0.038211 |
ORF8 | 32 | V32L | Gta | Tta | 35 | 1659 | B.1.429 | 0.000824 |
ORF8 | 32 | V32A | gTa | gCa | 586 | 588 | All | 0.000112 |
ORF8 | 32 | V32A | gTA | gCT | 2 | 588 | All | 0 |
ORF8 | 32 | V32del | GTA | --- | 546 | 546 | All | 0.000104 |
ORF8 | 32 | V32L | Gta | Tta | 471 | 511 | B.1.1.7 | 0.000422 |
ORF8 | 32 | V32L | Gta | Cta | 40 | 511 | B.1.1.7 | 0.000036 |
ORF8 | 32 | V32I | Gta | Ata | 461 | 461 | All | 0.000088 |
ORF8 | 32 | V32L | Gta | Tta | 343 | 389 | AY.4 | 0.000534 |
ORF8 | 32 | V32L | Gta | Cta | 46 | 389 | AY.4 | 0.000072 |
ORF8 | 32 | V32V | gtA | gtG | 355 | 387 | All | 0.000068 |
ORF8 | 32 | V32V | gtA | gtT | 30 | 387 | All | 0.000006 |
ORF8 | 32 | V32V | gtA | gtC | 2 | 387 | All | 0 |
ORF8 | 32 | V32L | Gta | Tta | 326 | 348 | B.1.617.2 | 0.001228 |
ORF8 | 32 | V32L | Gta | Cta | 22 | 348 | B.1.617.2 | 0.000083 |
ORF8 | 32 | V32A | gTa | gCa | 328 | 328 | B.1.1.7 | 0.000294 |
ORF8 | 32 | V32L | Gta | Tta | 212 | 212 | AD.2 | 0.04642 |
ORF8 | 32 | V32I | Gta | Ata | 151 | 151 | AY.34 | 0.014642 |
ORF8 | 32 | V32L | Gta | Tta | 142 | 150 | B.1 | 0.001301 |
ORF8 | 32 | V32L | Gta | Cta | 8 | 150 | B.1 | 0.000073 |
ORF8 | 32 | V32L | Gta | Tta | 146 | 146 | P.1 | 0.0023 |
ORF8 | 32 | V32L | Gta | Tta | 131 | 131 | AY.100 | 0.006027 |
ORF8 | 32 | V32L | Gta | Tta | 126 | 127 | AY.44 | 0.000767 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 127 | AY.44 | 0.000006 |
ORF8 | 32 | V32del1 | Gta | -ta | 112 | 125 | All | 0.000021 |
ORF8 | 32 | V32del1 | gtA | gt- | 13 | 125 | All | 0.000002 |
ORF8 | 32 | V32L | Gta | Tta | 125 | 125 | AY.94 | 0.055334 |
ORF8 | 32 | V32L | Gta | Tta | 121 | 121 | AY.3 | 0.001204 |
ORF8 | 32 | V32L | Gta | Tta | 115 | 116 | AY.103 | 0.000714 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 116 | AY.103 | 0.000006 |
ORF8 | 32 | V32L | Gta | Tta | 107 | 107 | B.1.351 | 0.003181 |
ORF8 | 32 | V32del | GTA | --- | 94 | 94 | B.1.1.7 | 0.000084 |
ORF8 | 32 | V32I | Gta | Ata | 91 | 91 | B.1.372 | 1 |
ORF8 | 32 | V32L | Gta | Tta | 82 | 83 | AY.43 | 0.000363 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 83 | AY.43 | 0.000004 |
ORF8 | 32 | V32L | Gta | Tta | 81 | 82 | B.1.1 | 0.001469 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 82 | B.1.1 | 0.000018 |
ORF8 | 32 | V32del | GTA | --- | 78 | 78 | AY.4 | 0.000121 |
ORF8 | 32 | V32L | Gta | Tta | 66 | 69 | AY.98 | 0.005214 |
ORF8 | 32 | V32L | Gta | Cta | 3 | 69 | AY.98 | 0.000237 |
ORF8 | 32 | V32L | Gta | Tta | 63 | 63 | B.1.1.519 | 0.002502 |
ORF8 | 32 | V32A | gTa | gCa | 62 | 62 | AY.43 | 0.000275 |
ORF8 | 32 | V32L | Gta | Tta | 60 | 61 | B.1.2 | 0.000528 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 61 | B.1.2 | 0.000009 |
ORF8 | 32 | V32I | Gta | Ata | 58 | 58 | AY.4 | 0.00009 |
ORF8 | 32 | V32V | gtA | gtG | 53 | 55 | B.1.1.7 | 0.000047 |
ORF8 | 32 | V32V | gtA | gtT | 2 | 55 | B.1.1.7 | 0.000002 |
ORF8 | 32 | V32del1 | Gta | -ta | 52 | 52 | B.1.1.7 | 0.000047 |
ORF8 | 32 | V32V | gtA | gtG | 49 | 49 | AY.43 | 0.000217 |
ORF8 | 32 | V32L | Gta | Tta | 46 | 46 | B.1.427 | 0.002323 |
ORF8 | 32 | V32V | gtA | gtG | 45 | 45 | AY.103 | 0.000279 |
ORF8 | 32 | V32A | gTa | gCa | 43 | 43 | B.1.2 | 0.000379 |
ORF8 | 32 | V32L | Gta | Tta | 41 | 41 | B.1.160 | 0.001279 |
ORF8 | 32 | V32del | GTA | --- | 38 | 38 | AY.29 | 0.000599 |
ORF8 | 32 | V32V | gtA | gtG | 37 | 38 | B.1.617.2 | 0.000139 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 38 | B.1.617.2 | 0.000004 |
ORF8 | 32 | V32L | Gta | Tta | 37 | 37 | B.1.177.21 | 0.002829 |
ORF8 | 32 | V32L | Gta | Tta | 34 | 35 | AY.120 | 0.001264 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 35 | AY.120 | 0.000037 |
ORF8 | 32 | V32L | Gta | Tta | 34 | 34 | B.1.177 | 0.000448 |
ORF8 | 32 | V32del | GTA | --- | 33 | 33 | B.1.1.222 | 0.006732 |
ORF8 | 32 | V32del | GTA | --- | 33 | 33 | B.1.243 | 0.002296 |
ORF8 | 32 | V32L | Gta | Tta | 28 | 31 | AY.25 | 0.000168 |
ORF8 | 32 | V32L | Gta | Cta | 3 | 31 | AY.25 | 0.000018 |
ORF8 | 32 | V32L | Gta | Tta | 31 | 31 | AY.82 | 0.042062 |
ORF8 | 32 | V32I | Gta | Ata | 31 | 31 | B.1.551 | 0.04 |
ORF8 | 32 | V32V | gtA | gtG | 27 | 28 | AY.25 | 0.000162 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 28 | AY.25 | 0.000006 |
ORF8 | 32 | V32L | Gta | Tta | 27 | 27 | B.1.1.521 | 0.144385 |
ORF8 | 32 | V32L | Gta | Tta | 25 | 26 | AY.47 | 0.000778 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 26 | AY.47 | 0.000031 |
ORF8 | 32 | V32V | gtA | gtT | 22 | 25 | B.1.2 | 0.000194 |
ORF8 | 32 | V32V | gtA | gtG | 3 | 25 | B.1.2 | 0.000026 |
ORF8 | 32 | V32del | GTA | --- | 24 | 24 | AY.103 | 0.000149 |
ORF8 | 32 | V32L | Gta | Tta | 24 | 24 | B.1.22 | 0.031621 |
ORF8 | 32 | V32L | Gta | Tta | 23 | 23 | AY.46.6 | 0.001661 |
ORF8 | 32 | V32del | GTA | --- | 22 | 22 | B.1.1 | 0.000399 |
ORF8 | 32 | V32V | gtA | gtG | 22 | 22 | B.1.1.519 | 0.000874 |
ORF8 | 32 | V32I | Gta | Ata | 22 | 22 | B.1.1.7 | 0.00002 |
ORF8 | 32 | V32L | Gta | Tta | 13 | 21 | B.1.526 | 0.000306 |
ORF8 | 32 | V32L | Gta | Cta | 8 | 21 | B.1.526 | 0.000188 |
ORF8 | 32 | V32V | gtA | gtG | 20 | 20 | AY.4 | 0.000031 |
ORF8 | 32 | V32L | Gta | Tta | 20 | 20 | P.1.1 | 0.006353 |
ORF8 | 32 | V32L | Gta | Tta | 19 | 19 | AY.20 | 0.000738 |
ORF8 | 32 | V32L | Gta | Tta | 19 | 19 | B.1.177.58 | 0.0253 |
ORF8 | 32 | V32A | gTa | gCa | 16 | 18 | AY.4 | 0.000025 |
ORF8 | 32 | V32A | gTA | gCT | 2 | 18 | AY.4 | 0.000003 |
ORF8 | 32 | V32del | GTA | --- | 18 | 18 | B | 0.002301 |
ORF8 | 32 | V32del1 | Gta | -ta | 18 | 18 | B.1.429 | 0.000424 |
ORF8 | 32 | V32L | Gta | Tta | 18 | 18 | B.1.637 | 0.001315 |
ORF8 | 32 | V32L | Gta | Tta | 17 | 17 | B.1.1.222 | 0.003468 |
ORF8 | 32 | V32V | gtA | gtG | 17 | 17 | P.1.14 | 0.000813 |
ORF8 | 32 | V32A | gTa | gCa | 16 | 16 | AY.44 | 0.000097 |
ORF8 | 32 | V32A | gTa | gCa | 16 | 16 | B.1.577 | 0.010997 |
ORF8 | 32 | V32del2 | gTA | g-- | 14 | 15 | All | 0.000003 |
ORF8 | 32 | V32del2 | GTa | --a | 1 | 15 | All | 0 |
ORF8 | 32 | V32L | Gta | Tta | 12 | 14 | AY.39 | 0.000297 |
ORF8 | 32 | V32L | Gta | Cta | 2 | 14 | AY.39 | 0.000049 |
ORF8 | 32 | V32L | Gta | Tta | 13 | 14 | B.1.621 | 0.001151 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 14 | B.1.621 | 0.000089 |
ORF8 | 32 | V32L | Gta | Tta | 9 | 13 | AY.5 | 0.000186 |
ORF8 | 32 | V32L | Gta | Cta | 4 | 13 | AY.5 | 0.000083 |
ORF8 | 32 | V32L | Gta | Tta | 13 | 13 | B.1.241 | 0.010552 |
ORF8 | 32 | V32L | Gta | Tta | 12 | 12 | AY.102 | 0.000318 |
ORF8 | 32 | V32I | Gta | Ata | 12 | 12 | AY.103 | 0.000075 |
ORF8 | 32 | V32L | Gta | Tta | 12 | 12 | AY.26 | 0.00034 |
ORF8 | 32 | V32L | Gta | Tta | 11 | 11 | AY.114 | 0.002542 |
ORF8 | 32 | V32del | GTA | --- | 11 | 11 | AY.4.2 | 0.000239 |
ORF8 | 32 | V32del | GTA | --- | 11 | 11 | B.1 | 0.000101 |
ORF8 | 32 | V32L | Gta | Tta | 11 | 11 | B.1.1.1 | 0.003594 |
ORF8 | 32 | V32L | Gta | Tta | 11 | 11 | B.1.1.28 | 0.003424 |
ORF8 | 32 | V32del2 | gTA | g-- | 11 | 11 | B.1.1.7 | 0.00001 |
ORF8 | 32 | V32L | Gta | Tta | 11 | 11 | B.1.524 | 0.015471 |
ORF8 | 32 | V32L | GtA | TtG | 4 | 10 | 0.222222 | |
ORF8 | 32 | V32L | Gta | Cta | 2 | 10 | 0.111111 | |
ORF8 | 32 | V32L | Gta | Tta | 2 | 10 | 0.111111 | |
ORF8 | 32 | V32L | GtA | CtG | 2 | 10 | 0.111111 | |
ORF8 | 32 | V32L | Gta | Tta | 10 | 10 | AY.3.1 | 0.000853 |
ORF8 | 32 | V32L | Gta | Tta | 9 | 10 | AY.33 | 0.000601 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 10 | AY.33 | 0.000067 |
ORF8 | 32 | V32del | GTA | --- | 10 | 10 | AY.48 | 0.004651 |
ORF8 | 32 | V32L | Gta | Tta | 10 | 10 | AY.9.2 | 0.000367 |
ORF8 | 32 | V32L | Gta | Tta | 10 | 10 | AY.98.1 | 0.000484 |
ORF8 | 32 | V32del | GTA | --- | 10 | 10 | B.1.160 | 0.000312 |
ORF8 | 32 | V32L | Gta | Tta | 10 | 10 | B.1.384 | 1 |
ORF8 | 32 | V32I | Gta | Ata | 10 | 10 | B.1.596 | 0.000871 |
ORF8 | 32 | V32del | GTA | --- | 10 | 10 | B.1.617.2 | 0.000038 |
ORF8 | 32 | V32M | GtA | AtG | 9 | 9 | All | 0.000002 |
ORF8 | 32 | V32A | gTa | gCa | 9 | 9 | AY.65 | 0.004797 |
ORF8 | 32 | V32del1 | Gta | -ta | 9 | 9 | B.1.349 | 0.006433 |
ORF8 | 32 | V32E | gTa | gAa | 8 | 8 | All | 0.000002 |
ORF8 | 32 | V32L | Gta | Tta | 8 | 8 | AY.121 | 0.001083 |
ORF8 | 32 | V32L | Gta | Tta | 8 | 8 | AY.23 | 0.000558 |
ORF8 | 32 | V32L | Gta | Tta | 8 | 8 | AY.32 | 0.00426 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 8 | AY.4.2 | 0.00013 |
ORF8 | 32 | V32L | Gta | Cta | 2 | 8 | AY.4.2 | 0.000043 |
ORF8 | 32 | V32L | Gta | Tta | 8 | 8 | AY.46 | 0.000833 |
ORF8 | 32 | V32A | gTa | gCa | 8 | 8 | B.1.1 | 0.000145 |
ORF8 | 32 | V32V | gtA | gtG | 8 | 8 | B.1.1.214 | 0.000444 |
ORF8 | 32 | V32V | gtA | gtG | 8 | 8 | B.1.1.222 | 0.001632 |
ORF8 | 32 | V32del | GTA | --- | 8 | 8 | B.1.1.284 | 0.000859 |
ORF8 | 32 | V32L | Gta | Tta | 8 | 8 | B.1.1.420 | 0.008048 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 8 | B.1.243 | 0.000487 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 8 | B.1.243 | 0.00007 |
ORF8 | 32 | V32L | Gta | Cta | 6 | 7 | AY.12 | 0.001896 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 7 | AY.12 | 0.000316 |
ORF8 | 32 | V32I | Gta | Ata | 7 | 7 | AY.25 | 0.000042 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 7 | AY.45 | 0.00073 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 7 | AY.45 | 0.000122 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | AY.79 | 0.008475 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | AY.84 | 0.003062 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | B.1.1.205 | 0.026022 |
ORF8 | 32 | V32del | GTA | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | B.1.1.327 | 0.7 |
ORF8 | 32 | V32del | GTA | --- | 7 | 7 | B.1.2 | 0.000062 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | B.1.240 | 0.001509 |
ORF8 | 32 | V32del | GTA | --- | 7 | 7 | B.1.36.16 | 0.009972 |
ORF8 | 32 | V32L | Gta | Tta | 7 | 7 | B.1.609 | 0.003356 |
ORF8 | 32 | V32del | GTA | --- | 7 | 7 | P.1 | 0.00011 |
ORF8 | 32 | V32del1 | Gta | -ta | 7 | 7 | P.1 | 0.00011 |
ORF8 | 32 | V32del | GTA | --- | 7 | 7 | P.1.14 | 0.000335 |
ORF8 | 32 | V32A | gTa | gCa | 6 | 6 | AY.29 | 0.000095 |
ORF8 | 32 | V32del | GTA | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF8 | 32 | V32A | gTa | gCa | 6 | 6 | AY.3 | 0.00006 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | AY.42 | 0.000241 |
ORF8 | 32 | V32V | gtA | gtG | 6 | 6 | AY.44 | 0.000037 |
ORF8 | 32 | V32V | gtA | gtG | 6 | 6 | AY.47 | 0.000187 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | AY.48 | 0.002791 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | AY.85 | 0.002563 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | AY.9 | 0.000406 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | AY.90 | 0.004107 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | B.1.1.326 | 0.010563 |
ORF8 | 32 | V32del | GTA | --- | 6 | 6 | B.1.243.2 | 0.086957 |
ORF8 | 32 | V32A | gTa | gCa | 6 | 6 | B.1.617.2 | 0.000023 |
ORF8 | 32 | V32L | Gta | Tta | 6 | 6 | C.37 | 0.000696 |
ORF8 | 32 | V32A | gTa | gCa | 6 | 6 | P.1 | 0.000095 |
ORF8 | 32 | V32del1 | Gta | -ta | 5 | 5 | AY.117 | 0.000423 |
ORF8 | 32 | V32A | gTa | gCa | 5 | 5 | AY.25 | 0.00003 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | AY.29 | 0.000079 |
ORF8 | 32 | V32del | GTA | --- | 5 | 5 | AY.3 | 0.00005 |
ORF8 | 32 | V32del | GTA | --- | 5 | 5 | AY.44 | 0.00003 |
ORF8 | 32 | V32V | gtA | gtG | 5 | 5 | B.1.1 | 0.000091 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.1.284 | 0.000537 |
ORF8 | 32 | V32V | gtA | gtG | 5 | 5 | B.1.1.33 | 0.002104 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.1.369 | 0.002231 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.1.37 | 0.000964 |
ORF8 | 32 | V32del1 | gtA | gt- | 5 | 5 | B.1.1.389 | 0.030303 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.1.39 | 0.002548 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.1.486 | 0.007886 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.258 | 0.000333 |
ORF8 | 32 | V32L | Gta | Tta | 5 | 5 | B.1.617.1 | 0.000645 |
ORF8 | 32 | V32G | gTa | gGa | 4 | 4 | All | 0.000001 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | AY.113 | 0.00057 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | AY.13 | 0.000644 |
ORF8 | 32 | V32I | Gta | Ata | 4 | 4 | AY.20 | 0.000155 |
ORF8 | 32 | V32del | GTA | --- | 4 | 4 | AY.34 | 0.000388 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | AY.35 | 0.000932 |
ORF8 | 32 | V32V | gtA | gtG | 4 | 4 | AY.4.2 | 0.000087 |
ORF8 | 32 | V32del | GTA | --- | 4 | 4 | AY.43 | 0.000018 |
ORF8 | 32 | V32I | Gta | Ata | 4 | 4 | AY.43 | 0.000018 |
ORF8 | 32 | V32E | gTa | gAa | 4 | 4 | AY.46.6 | 0.000289 |
ORF8 | 32 | V32del | GTA | --- | 4 | 4 | AY.5 | 0.000083 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | AY.75 | 0.000224 |
ORF8 | 32 | V32A | gTa | gCa | 4 | 4 | B.1 | 0.000037 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | B.1.1.416 | 0.00362 |
ORF8 | 32 | V32del | GTA | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF8 | 32 | V32del1 | Gta | -ta | 4 | 4 | B.1.2 | 0.000035 |
ORF8 | 32 | V32V | gtA | gtG | 4 | 4 | B.1.258.14 | 0.003922 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | B.1.281 | 0.086957 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | B.1.36 | 0.000584 |
ORF8 | 32 | V32L | Gta | Tta | 4 | 4 | B.1.438.1 | 0.000429 |
ORF8 | 32 | V32I | Gta | Ata | 4 | 4 | B.1.568 | 0.004444 |
ORF8 | 32 | V32I | Gta | Ata | 4 | 4 | B.1.617.2 | 0.000015 |
ORF8 | 32 | V32T | GTa | ACa | 2 | 3 | All | 0 |
ORF8 | 32 | V32T | GTA | ACT | 1 | 3 | All | 0 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.1 | 0.001187 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.107 | 0.001398 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 3 | AY.117 | 0.000169 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 3 | AY.117 | 0.000085 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | AY.20 | 0.000117 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | AY.25 | 0.000018 |
ORF8 | 32 | V32V | gtA | gtG | 3 | 3 | AY.3 | 0.00003 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.34 | 0.000291 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | AY.39 | 0.000074 |
ORF8 | 32 | V32del1 | Gta | -ta | 3 | 3 | AY.4 | 0.000005 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | AY.44 | 0.000018 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | AY.5 | 0.000062 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 3 | AY.5.3 | 0.000675 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 3 | AY.5.3 | 0.000337 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.54 | 0.000286 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.57 | 0.001969 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.58 | 0.002722 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 3 | AY.6 | 0.000082 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 3 | AY.6 | 0.000041 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.74 | 0.000347 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.80 | 0.003386 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | AY.83 | 0.005172 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | AY.94 | 0.001328 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | AY.98.1 | 0.000145 |
ORF8 | 32 | V32V | gtA | gtG | 3 | 3 | B.1 | 0.000027 |
ORF8 | 32 | V32M | GtA | AtG | 3 | 3 | B.1 | 0.000027 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | B.1.1 | 0.000054 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.1.181 | 0.013636 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | B.1.1.214 | 0.000166 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.1.216 | 0.002671 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.1.317 | 0.001235 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | B.1.1.33 | 0.001263 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.1.434 | 0.001046 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | B.1.1.519 | 0.000119 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | B.1.1.63 | 0.001157 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | B.1.131 | 0.026316 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.149 | 0.010274 |
ORF8 | 32 | V32A | gTa | gCa | 3 | 3 | B.1.177 | 0.00004 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | B.1.177 | 0.00004 |
ORF8 | 32 | V32L | Gta | Cta | 3 | 3 | B.1.239 | 0.003663 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | B.1.258.17 | 0.000312 |
ORF8 | 32 | V32V | gtA | gtG | 3 | 3 | B.1.351 | 0.000089 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | B.1.429 | 0.000071 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | B.1.509 | 0.002597 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | B.1.525 | 0.000339 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 3 | B.1.525 | 0.000226 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 3 | B.1.525 | 0.000113 |
ORF8 | 32 | V32I | Gta | Ata | 3 | 3 | B.1.637 | 0.000219 |
ORF8 | 32 | V32del | GTA | --- | 3 | 3 | P.1.1 | 0.000953 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | R.1 | 0.00027 |
ORF8 | 32 | V32L | Gta | Tta | 3 | 3 | W.1 | 0.026087 |
ORF8 | 32 | V32del1 | gtA | gt- | 2 | 2 | 0.111111 | |
ORF8 | 32 | V32V | gtA | gtG | 2 | 2 | A.2.4 | 0.006734 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 2 | A.2.5 | 0.000499 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 2 | A.2.5 | 0.000499 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | A.2.5.2 | 0.003145 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | A.21 | 0.00554 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | AY.100 | 0.000092 |
ORF8 | 32 | V32A | gTa | gCa | 2 | 2 | AY.103 | 0.000012 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | AY.114 | 0.000462 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.119 | 0.000071 |
ORF8 | 32 | V32V | gtA | gtG | 2 | 2 | AY.14 | 0.000176 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.16 | 0.000759 |
ORF8 | 32 | V32V | gtA | gtG | 2 | 2 | AY.20 | 0.000078 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.23 | 0.000139 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | AY.26 | 0.000057 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.27 | 0.000129 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.28 | 0.003781 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.29.1 | 0.000441 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.3 | 0.00002 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 2 | AY.30 | 0.000396 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 2 | AY.30 | 0.000396 |
ORF8 | 32 | V32A | gTa | gCa | 2 | 2 | AY.33 | 0.000134 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.33 | 0.000134 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.36 | 0.000296 |
ORF8 | 32 | V32del1 | Gta | -ta | 2 | 2 | AY.39.1 | 0.000079 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | AY.4.2 | 0.000043 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 2 | AY.41 | 0.000294 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 2 | AY.41 | 0.000294 |
ORF8 | 32 | V32A | gTa | gCa | 2 | 2 | AY.42 | 0.00008 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.46.4 | 0.000329 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 2 | AY.61 | 0.000105 |
ORF8 | 32 | V32V | gtA | gtC | 1 | 2 | AY.61 | 0.000105 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.7.1 | 0.000225 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | AY.84 | 0.000875 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.93 | 0.000546 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | AY.95 | 0.001522 |
ORF8 | 32 | V32V | gtA | gtG | 2 | 2 | B | 0.000256 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.1 | 0.000018 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.1.170 | 0.002494 |
ORF8 | 32 | V32L | Gta | Cta | 2 | 2 | B.1.1.229 | 0.011494 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.1.25 | 0.001137 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.1.1.33 | 0.000842 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.1.1.519 | 0.000079 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | B.1.126 | 0.002551 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.177.73 | 0.001133 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.234 | 0.000264 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | B.1.258.17 | 0.000208 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 2 | B.1.311 | 0.000275 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 2 | B.1.311 | 0.000275 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 32 | V32A | gTa | gCa | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.36.18 | 0.00084 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.36.31 | 0.003503 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.1.369 | 0.00057 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF8 | 32 | V32V | gtA | gtG | 2 | 2 | B.1.429 | 0.000047 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.1.429 | 0.000047 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.497 | 0.00063 |
ORF8 | 32 | V32A | gTa | gCa | 2 | 2 | B.1.526 | 0.000047 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.575 | 0.000607 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.596 | 0.000174 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | B.1.621.1 | 0.001012 |
ORF8 | 32 | V32I | Gta | Ata | 2 | 2 | B.4 | 0.004415 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | B.40 | 0.000729 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | P.1.14 | 0.000096 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | P.1.15 | 0.000465 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF8 | 32 | V32del | GTA | --- | 2 | 2 | P.1.17 | 0.000324 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | P.1.17 | 0.000324 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | P.1.2 | 0.002312 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | P.3 | 0.00319 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | Q.3 | 0.00029 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | Q.4 | 0.00091 |
ORF8 | 32 | V32L | Gta | Tta | 2 | 2 | Q.8 | 0.00033 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | A.2 | 0.000662 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | A.2 | 0.000662 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | A.2 | 0.000662 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | A.2.4 | 0.003367 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | A.2.4 | 0.003367 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | A.2.4 | 0.003367 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | A.2.5 | 0.000499 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | A.23 | 0.010526 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AE.4 | 0.043478 |
ORF8 | 32 | V32K | GTa | AAa | 1 | 1 | All | 0 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | AU.3 | 0.00211 |
ORF8 | 32 | V32G | gTa | gGa | 1 | 1 | AY.10 | 0.00053 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.101 | 0.00049 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.102 | 0.000027 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.102 | 0.000027 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.106 | 0.000335 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.111 | 0.000183 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.117 | 0.000085 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.119 | 0.000035 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.120.1 | 0.000321 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.121 | 0.000135 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.14 | 0.000088 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.23 | 0.00007 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.29 | 0.000016 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | AY.3 | 0.00001 |
ORF8 | 32 | V32del2 | gTA | g-- | 1 | 1 | AY.34 | 0.000097 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.39.1 | 0.00004 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.4.2 | 0.000022 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.4.4 | 0.000409 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 32 | V32E | gTa | gAa | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 32 | V32del2 | gTA | g-- | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.45 | 0.000122 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.46.2 | 0.000635 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.46.5 | 0.000198 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.5 | 0.000021 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.52 | 0.000814 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.53 | 0.000288 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | AY.54 | 0.000095 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.55 | 0.000917 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.6 | 0.000041 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.60 | 0.000938 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.61 | 0.000105 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.68 | 0.000274 |
ORF8 | 32 | V32E | gTa | gAa | 1 | 1 | AY.69 | 0.000187 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.7 | 0.000196 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.70 | 0.000209 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.72 | 0.001361 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | AY.74 | 0.000116 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.75.1 | 0.00018 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.77 | 0.001127 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.88 | 0.000884 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.9.1 | 0.000084 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.91 | 0.00073 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.91 | 0.00073 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | AY.98 | 0.000079 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | AZ.2 | 0.000821 |
ORF8 | 32 | V32del2 | gTA | g-- | 1 | 1 | B.1 | 0.000009 |
ORF8 | 32 | V32T | GTA | ACT | 1 | 1 | B.1 | 0.000009 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 32 | V32T | GTa | ACa | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 32 | V32K | GTa | AAa | 1 | 1 | B.1.1 | 0.000018 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.133 | 0.008475 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.164 | 0.005155 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.1.169 | 0.018182 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.214 | 0.000055 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.1.218 | 0.007692 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.282 | 0.011628 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.1.294 | 0.001266 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.303 | 0.002762 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.305 | 0.003861 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.348 | 0.000796 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.351 | 0.002793 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.1.388 | 0.045455 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.432 | 0.001266 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.1.434 | 0.000349 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | B.1.1.50 | 0.000679 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.50 | 0.000679 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.507 | 0.008696 |
ORF8 | 32 | V32del2 | GTa | --a | 1 | 1 | B.1.1.519 | 0.00004 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.1.519 | 0.00004 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.526 | 0.003546 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.54 | 0.003021 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.61 | 0.008772 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.1.63 | 0.000386 |
ORF8 | 32 | V32G | gTa | gGa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.147 | 0.000756 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.160.16 | 0.000929 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.170 | 0.00431 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.177.11 | 0.001698 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.177.4 | 0.000211 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.177.44 | 0.000519 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.177.52 | 0.001757 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.177.63 | 0.002703 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.177.67 | 0.007634 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.177.79 | 0.002342 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.177.81 | 0.000189 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.177.82 | 0.000477 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.177.85 | 0.005435 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.206 | 0.000816 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.210 | 0.002132 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.210 | 0.002132 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.214.2 | 0.0006 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.221 | 0.000071 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.221.1 | 0.002907 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.236 | 0.002053 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | B.1.243 | 0.00007 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.243 | 0.00007 |
ORF8 | 32 | V32V | gtA | gtT | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.258.12 | 0.007874 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.258.17 | 0.000104 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | B.1.305 | 0.002151 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.311 | 0.000275 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | B.1.329 | 0.000608 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.348 | 0.018182 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.350 | 0.002933 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.351 | 0.00003 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.351.2 | 0.000303 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.36.10 | 0.004785 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 32 | V32T | GTa | ACa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.36.31 | 0.001751 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.36.8 | 0.001 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.369 | 0.000285 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.375 | 0.00082 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.378 | 0.006849 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | B.1.429.1 | 0.012048 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.438.1 | 0.000107 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.470 | 0.001404 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.503 | 0.002488 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.508 | 0.025641 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.509 | 0.000866 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.517 | 0.000427 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | B.1.526 | 0.000024 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.537 | 0.02 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | B.1.551 | 0.00129 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | B.1.564 | 0.000426 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.565 | 0.00081 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.567 | 0.003333 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.568 | 0.001111 |
ORF8 | 32 | V32M | GtA | AtG | 1 | 1 | B.1.581 | 0.009434 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.595.4 | 0.007299 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | B.1.596 | 0.000087 |
ORF8 | 32 | V32del1 | gtA | gt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 32 | V32E | gTa | gAa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.617.3 | 0.002985 |
ORF8 | 32 | V32I | Gta | Ata | 1 | 1 | B.1.620 | 0.000946 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | B.1.623 | 0.000536 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.625 | 0.002353 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.1.627 | 0.00202 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | B.1.88.1 | 0.004808 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | B.1.93 | 0.000934 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.4 | 0.002208 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | B.40 | 0.000364 |
ORF8 | 32 | V32G | gTa | gGa | 1 | 1 | B.6 | 0.00091 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | C.26 | 0.007353 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | C.35 | 0.000774 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | C.37 | 0.000116 |
ORF8 | 32 | V32E | gTa | gAa | 1 | 1 | D.2 | 0.000075 |
ORF8 | 32 | V32L | Gta | Cta | 1 | 1 | D.2 | 0.000075 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | D.2 | 0.000075 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | D.3 | 0.005917 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | N.3 | 0.005814 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | N.6 | 0.007092 |
ORF8 | 32 | V32G | gTa | gGa | 1 | 1 | P.1 | 0.000016 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | P.1.10 | 0.000269 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 32 | V32del1 | Gta | -ta | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 32 | V32del | GTA | --- | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 32 | V32V | gtA | gtG | 1 | 1 | P.1.16 | 0.000374 |
ORF8 | 32 | V32A | gTa | gCa | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 32 | V32V | gtA | gtC | 1 | 1 | P.1.7 | 0.000319 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | P.2 | 0.000187 |
ORF8 | 32 | V32L | Gta | Tta | 1 | 1 | Q.1 | 0.000126 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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