CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 27

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF827Q27XnonsynCaaTaa114162011416070.99998927972-27974
ORF827Q27XnonsynCaATaG114162090.0000078835327972-27974
ORF827Q27XnonsynCAaTGa114162040.0000035037927972-27974
ORF827Q27deldelCAA---542542127972-27974
ORF827Q27KnonsynCaaAaa320320127972-27974
ORF827Q27LnonsyncAacTa1521470.96710527972-27974
ORF827Q27LnonsynCAaTTa15230.019736827972-27974
ORF827Q27LnonsyncAAcTT15220.013157927972-27974
ORF827Q27RnonsyncAacGa122122127972-27974
ORF827Q27QsyncaAcaG5959127972-27974
ORF827Q27del1delCaa-aa22180.81818227972-27974
ORF827Q27del1delCAaT-a2220.090909127972-27974
ORF827Q27del1delCAA-NN2210.045454527972-27974
ORF827Q27del1delCAA-GR2210.045454527972-27974
ORF827Q27HnonsyncaAcaT18140.77777827972-27974
ORF827Q27HnonsyncaAcaC1840.22222227972-27974
ORF827Q27del2delcAAc--740.57142927972-27974
ORF827Q27del2delCAAT--720.28571427972-27974
ORF827Q27del2delCAA--N710.14285727972-27974
ORF827Q27EnonsynCaaGaa66127972-27974
ORF827Q27YnonsynCaATaT430.7527972-27974
ORF827Q27YnonsynCaATaC410.2527972-27974
ORF827Q27FnonsynCAATTT33127972-27974
ORF827Q27SnonsynCAATCG22127972-27974
ORF827Q27DnonsynCaAGaT22127972-27974
ORF827Q27WnonsynCAATGG11127972-27974
ORF827Q27PnonsyncAacCa11127972-27974

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF827Q27XCaaTaa11416071141620All0.218346
ORF827Q27XCaATaG91141620All0.000002
ORF827Q27XCAaTGa41141620All0.000001
ORF827Q27XCaaTaa11067391106750B.1.1.70.990778
ORF827Q27XCaATaG71106750B.1.1.70.000006
ORF827Q27XCAaTGa41106750B.1.1.70.000004
ORF827Q27XCaaTaa78497849Q.10.991536
ORF827Q27XCaaTaa68626862Q.30.995214
ORF827Q27XCaaTaa60396039Q.80.995877
ORF827Q27XCaaTaa25282528B.1.10.04586
ORF827Q27XCaaTaa21922192Q.40.996817
ORF827Q27XCaaTaa13921392B.10.01275
ORF827Q27XCaaTaa13841384Q.20.84908
ORF827Q27XCaaTaa897897Q.70.996667
ORF827Q27delCAA---542542All0.000104
ORF827Q27XCaaTaa483483AY.40.000752
ORF827Q27XCaaTaa432432B.1.617.20.001627
ORF827Q27KCaaAaa320320All0.000061
ORF827Q27XCaaTaa237237B.1.1600.007391
ORF827Q27XCaaTaa176176B.1.258.170.018299
ORF827Q27XCaaTaa173173B.1.1770.002278
ORF827Q27XCaaTaa164164B.1.5760.148685
ORF827Q27LcAacTa147152All0.000028
ORF827Q27LCAaTTa3152All0.000001
ORF827Q27LcAAcTT2152All0
ORF827Q27XCaaTaa151151Q.61
ORF827Q27XCaaTaa145145AY.440.000883
ORF827Q27XCaaTaa143143AY.1030.000888
ORF827Q27XCaaTaa139139B.1.177.730.078709
ORF827Q27XCaaTaa136136P.10.002143
ORF827Q27RcAacGa122122All0.000023
ORF827Q27XCaaTaa119119AY.430.000527
ORF827Q27XCaaTaa110110B.1.5260.002585
ORF827Q27XCaaTaa9696B.1.2580.006389
ORF827Q27delCAA---9595B.1.1.70.000085
ORF827Q27XCaaTaa9595B.1.351.20.028744
ORF827Q27XCaaTaa9090B.1.36.180.037815
ORF827Q27XCaaTaa8989B.1.5960.007755
ORF827Q27XCaaTaa8585B.1.20.000748
ORF827Q27XCaaTaa8080B.1.1.2140.004437
ORF827Q27delCAA---7878AY.40.000121
ORF827Q27XCaaTaa6868P.1.10.021601
ORF827Q27XCaaTaa6767B.1.3510.001992
ORF827Q27XCaaTaa6666B.1.3750.054098
ORF827Q27XCaaTaa6060B.1.177.820.02864
ORF827Q27QcaAcaG5959All0.000011
ORF827Q27XCaaTaa5858Q.50.983051
ORF827Q27XCaaTaa4848AY.250.000289
ORF827Q27XCaaTaa4545XA1
ORF827Q27XCaaTaa4343B0.005496
ORF827Q27KCaaAaa4343B.1.2580.002862
ORF827Q27XCaaTaa4141AY.50.000847
ORF827Q27XCaaTaa4141B.1.1.4090.116147
ORF827Q27XCaaTaa4040AY.390.000988
ORF827Q27XCaaTaa4040P.20.007465
ORF827Q27delCAA---3939AY.290.000615
ORF827Q27XCaaTaa3939B.1.6090.018696
ORF827Q27XCaaTaa3838B.1.177.70.006264
ORF827Q27XCaaTaa3838P.1.170.006147
ORF827Q27XCaaTaa3737B.1.6200.035005
ORF827Q27LcAacTa3636AY.30.000358
ORF827Q27XCaaTaa3636B.1.4290.000847
ORF827Q27XCaaTaa3535B.1.1.2910.025984
ORF827Q27XCaaTaa3535B.1.221.40.145833
ORF827Q27XCaaTaa3434AY.610.003562
ORF827Q27delCAA---3434B.1.2430.002366
ORF827Q27delCAA---3333B.1.1.2220.006732
ORF827Q27RcAacGa3232B.1.1.2190.16
ORF827Q27XCaaTaa3131AY.4.20.000672
ORF827Q27KCaaAaa3030AY.40.000047
ORF827Q27XCaaTaa2929B.1.1.1610.102473
ORF827Q27XCaaTaa2929P.1.100.007815
ORF827Q27KCaaAaa2828B.1.617.20.000105
ORF827Q27XCaaTaa2727A.270.044702
ORF827Q27XCaaTaa2727AY.560.043339
ORF827Q27XCaaTaa2727B.1.2210.001918
ORF827Q27XCaaTaa2727B.1.2430.001879
ORF827Q27XCaaTaa2626AY.1020.000689
ORF827Q27XCaaTaa2626B.1.1.390.013252
ORF827Q27LcAacTa2525AY.1030.000155
ORF827Q27XCaaTaa2525AY.260.000708
ORF827Q27XCaaTaa2525AY.98.10.001211
ORF827Q27XCaaTaa2525B.1.1.3550.384615
ORF827Q27XCaaTaa2525B.1.1.5190.000993
ORF827Q27XCaaTaa2525C.281
ORF827Q27RcAacGa2323AY.40.000036
ORF827Q27delCAA---2323B.1.10.000417
ORF827Q27XCaaTaa2323B.1.4270.001161
ORF827Q27RcAacGa2323B.1.617.20.000087
ORF827Q27XCaaTaa2323P.1.120.011133
ORF827Q27del1Caa-aa1822All0.000003
ORF827Q27del1CAaT-a222All0
ORF827Q27del1CAA-NN122All0
ORF827Q27del1CAA-GR122All0
ORF827Q27XCaaTaa2222B.1.2500.318841
ORF827Q27delCAA---2121AY.1030.00013
ORF827Q27XCaaTaa2121AY.350.004894
ORF827Q27XCaaTaa2121B.1.6190.018293
ORF827Q27KCaaAaa2020AY.430.000089
ORF827Q27XCaaTaa2020B.1.416.10.03125
ORF827Q27XCaaTaa1919B.1.177.860.003486
ORF827Q27QcaAcaG1919B.1.20.000167
ORF827Q27HcaAcaT1418All0.000003
ORF827Q27HcaAcaC418All0.000001
ORF827Q27KCaaAaa1818AY.30.000179
ORF827Q27XCaaTaa1818AY.30.000179
ORF827Q27delCAA---1818B0.002301
ORF827Q27del1Caa-aa1618B.1.1.70.000014
ORF827Q27del1CAaT-a218B.1.1.70.000002
ORF827Q27XCaaTaa1818P.1.140.00086
ORF827Q27XCaaTaa1818P.1.150.004182
ORF827Q27KCaaAaa1717AY.1030.000106
ORF827Q27XCaaTaa1616AY.1190.000565
ORF827Q27XCaaTaa1616B.1.6210.001416
ORF827Q27XCaaTaa1515AY.230.001046
ORF827Q27XCaaTaa1515B.1.1.3180.004526
ORF827Q27delCAA---1414AY.480.006512
ORF827Q27XCaaTaa1414AY.5.30.004723
ORF827Q27XCaaTaa1414B.1.1.330.005892
ORF827Q27KCaaAaa1414B.1.1770.000184
ORF827Q27LcAacTa1414P.10.000221
ORF827Q27XCaaTaa1313B.1.1.3120.024857
ORF827Q27XCaaTaa1313B.1.6230.006974
ORF827Q27XCaaTaa1313P.1.160.004863
ORF827Q27XCaaTaa1212AA.10.086957
ORF827Q27KCaaAaa1212AY.250.000072
ORF827Q27LcAacTa1212AY.250.000072
ORF827Q27LcAacTa1212AY.40.000019
ORF827Q27XCaaTaa1212AY.420.000483
ORF827Q27delCAA---1212B.10.00011
ORF827Q27XCaaTaa1212B.1.1.1890.018154
ORF827Q27XCaaTaa1212B.1.1.2940.01519
ORF827Q27XCaaTaa1212B.1.360.001751
ORF827Q27XCaaTaa1212B.1.5311
ORF827Q27XCaaTaa1212C.370.001393
ORF827Q27KCaaAaa1111AY.200.000428
ORF827Q27XCaaTaa1111AY.470.000342
ORF827Q27KCaaAaa1111AY.630.004255
ORF827Q27XCaaTaa1111B.1.1.2220.002244
ORF827Q27XCaaTaa1111B.1.1.2770.008346
ORF827Q27XCaaTaa1111B.1.1.4320.013924
ORF827Q27XCaaTaa1111R.10.00099
ORF827Q27KCaaAaa1010AY.260.000283
ORF827Q27XCaaTaa1010AY.60.000411
ORF827Q27XCaaTaa1010B.1.1.2200.018587
ORF827Q27XCaaTaa1010B.1.1.3060.004384
ORF827Q27XCaaTaa1010B.1.1.5280.048077
ORF827Q27delCAA---1010B.1.1600.000312
ORF827Q27XCaaTaa1010B.1.2340.001319
ORF827Q27XCaaTaa1010B.1.3110.002746
ORF827Q27XCaaTaa1010B.1.5990.036496
ORF827Q27delCAA---1010B.1.617.20.000038
ORF827Q27XCaaTaa1010C.36.30.005672
ORF827Q27XCaaTaa1010L.30.035461
ORF827Q27XCaaTaa790.388889
ORF827Q27XCaATaG290.111111
ORF827Q27XCaaTaa99B.1.1.5070.078261
ORF827Q27KCaaAaa99B.1.3110.002471
ORF827Q27XCaaTaa99B.1.3770.041096
ORF827Q27XCaaTaa88AY.1170.000676
ORF827Q27XCaaTaa88AY.200.000311
ORF827Q27RcAacGa88AY.430.000035
ORF827Q27XCaaTaa88AY.780.012327
ORF827Q27XCaaTaa88AY.950.006088
ORF827Q27LcAacTa88B.10.000073
ORF827Q27delCAA---88B.1.20.00007
ORF827Q27XCaaTaa88B.1.3670.006339
ORF827Q27XCaaTaa88B.1.5330.076923
ORF827Q27LCAaTTa370.166667
ORF827Q27LcAAcTT270.111111
ORF827Q27LcAacTa270.111111
ORF827Q27del2cAAc--47All0.000001
ORF827Q27del2CAAT--27All0
ORF827Q27del2CAA--N17All0
ORF827Q27XCaaTaa77AY.340.000679
ORF827Q27QcaAcaG77AY.40.000011
ORF827Q27delCAA---77AY.440.000043
ORF827Q27XCaaTaa77AY.540.000667
ORF827Q27XCaaTaa77AY.680.001916
ORF827Q27XCaaTaa77AZ.20.005747
ORF827Q27XCaaTaa77B.1.1.1410.014085
ORF827Q27XCaaTaa77B.1.1.1700.008728
ORF827Q27XCaaTaa77B.1.1.1760.003076
ORF827Q27delCAA---77B.1.1.2650.022082
ORF827Q27XCaaTaa77B.1.1.2820.081395
ORF827Q27XCaaTaa77B.1.1.2890.014583
ORF827Q27XCaaTaa77B.1.1.700.002387
ORF827Q27XCaaTaa77B.1.1260.008929
ORF827Q27XCaaTaa77B.1.1390.005132
ORF827Q27XCaaTaa77B.1.351.30.006135
ORF827Q27delCAA---77B.1.36.160.009972
ORF827Q27XCaaTaa77B.1.5800.028455
ORF827Q27XCaaTaa77B.1.619.10.00449
ORF827Q27KCaaAaa77B.1.6210.00062
ORF827Q27delCAA---77P.10.00011
ORF827Q27delCAA---77P.1.140.000335
ORF827Q27XCaaTaa66A0.002322
ORF827Q27ECaaGaa66All0.000001
ORF827Q27XCaaTaa66AY.290.000095
ORF827Q27delCAA---66AY.29.10.001323
ORF827Q27delCAA---66AY.30.00006
ORF827Q27KCaaAaa66AY.390.000148
ORF827Q27XCaaTaa66AY.750.000336
ORF827Q27XCaaTaa66AY.9.20.00022
ORF827Q27XCaaTaa66AY.920.001724
ORF827Q27KCaaAaa66B.10.000055
ORF827Q27XCaaTaa66B.1.1.3170.00247
ORF827Q27XCaaTaa66B.1.1.500.004073
ORF827Q27delCAA---66B.1.1770.000079
ORF827Q27XCaaTaa66B.1.177.40.001266
ORF827Q27delCAA---66B.1.243.20.086957
ORF827Q27RcAacGa66B.1.360.000875
ORF827Q27XCaaTaa66B.1.6250.014118
ORF827Q27XCaaTaa66B.1.6280.002114
ORF827Q27XCaaTaa66N.50.010601
ORF827Q27XCaaTaa66P.1.10.10.04878
ORF827Q27XCaaTaa55A.2.50.002495
ORF827Q27XCaaTaa55AY.1100.000563
ORF827Q27XCaaTaa55AY.1200.000186
ORF827Q27XCaaTaa55AY.16.10.00235
ORF827Q27KCaaAaa55AY.230.000349
ORF827Q27XCaaTaa55AY.380.002496
ORF827Q27XCaaTaa55AY.39.10.000198
ORF827Q27XCaaTaa55AY.46.60.000361
ORF827Q27XCaaTaa55B.1.1.280.001556
ORF827Q27QcaAcaG55B.1.1.3060.002192
ORF827Q27XCaaTaa55B.1.1.3160.004625
ORF827Q27XCaaTaa55B.1.1.370.000964
ORF827Q27XCaaTaa55B.1.1.4130.034483
ORF827Q27XCaaTaa55B.1.177.600.001092
ORF827Q27XCaaTaa55B.1.2370.024876
ORF827Q27XCaaTaa55B.1.2980.010571
ORF827Q27XCaaTaa55B.1.4200.052083
ORF827Q27XCaaTaa55B.1.6370.000365
ORF827Q27XCaaTaa44A.23.10.002817
ORF827Q27YCaATaT34All0.000001
ORF827Q27YCaATaC14All0
ORF827Q27XCaaTaa44AY.1000.000184
ORF827Q27LcAacTa44AY.1020.000106
ORF827Q27XCaaTaa44AY.1160.001147
ORF827Q27XCaaTaa44AY.120.20.005141
ORF827Q27QcaAcaG44AY.30.00004
ORF827Q27XCaaTaa44AY.300.001583
ORF827Q27delCAA---44AY.340.000388
ORF827Q27delCAA---44AY.430.000018
ORF827Q27KCaaAaa44AY.440.000024
ORF827Q27LcAacTa44AY.470.000124
ORF827Q27XCaaTaa44AY.520.003257
ORF827Q27XCaaTaa44AY.75.10.000721
ORF827Q27QcaAcaG44B.1.10.000073
ORF827Q27XCaaTaa44B.1.1.10.001307
ORF827Q27XCaaTaa44B.1.1.1870.035398
ORF827Q27XCaaTaa44B.1.1.2070.004728
ORF827Q27XCaaTaa44B.1.1.250.002274
ORF827Q27XCaaTaa44B.1.1.2650.012618
ORF827Q27delCAA---44B.1.1.5190.000159
ORF827Q27XCaaTaa44B.1.2140.014652
ORF827Q27XCaaTaa44B.1.214.20.002398
ORF827Q27KCaaAaa44B.1.2180.020619
ORF827Q27XCaaTaa44B.1.3480.072727
ORF827Q27XCaaTaa44B.1.3690.001141
ORF827Q27XCaaTaa44B.1.5170.001708
ORF827Q27XCaaTaa44B.1.5250.000453
ORF827Q27XCaaTaa44B.1.6020.026144
ORF827Q27XCaaTaa44B.1.617.10.000516
ORF827Q27LcAacTa44B.1.617.20.000015
ORF827Q27XCaaTaa44C.320.093023
ORF827Q27XCaaTaa44P.1.130.003594
ORF827Q27XCaaTaa33A.20.001985
ORF827Q27FCAATTT33All0.000001
ORF827Q27RcAacGa33AY.1000.000138
ORF827Q27XCaaTaa33AY.1080.003308
ORF827Q27XCaaTaa33AY.1180.000188
ORF827Q27XCaaTaa33AY.1210.000406
ORF827Q27XCaaTaa33AY.130.000483
ORF827Q27XCaaTaa33AY.160.001139
ORF827Q27LcAacTa33AY.200.000117
ORF827Q27delCAA---33AY.250.000018
ORF827Q27XCaaTaa33AY.330.0002
ORF827Q27XCaaTaa33AY.400.002893
ORF827Q27XCaaTaa33AY.450.000365
ORF827Q27XCaaTaa33AY.480.001395
ORF827Q27KCaaAaa33AY.650.001599
ORF827Q27XCaaTaa33AY.670.001393
ORF827Q27XCaaTaa33AY.99.20.000276
ORF827Q27XCaaTaa33B.1.1.2160.002671
ORF827Q27XCaaTaa33B.1.1.2580.009772
ORF827Q27XCaaTaa33B.1.1.4120.022901
ORF827Q27XCaaTaa33B.1.1.4860.004732
ORF827Q27KCaaAaa33B.1.1.5190.000119
ORF827Q27XCaaTaa33B.1.1.5250.016393
ORF827Q27XCaaTaa33B.1.1570.008955
ORF827Q27XCaaTaa33B.1.177.180.00348
ORF827Q27XCaaTaa33B.1.177.310.034483
ORF827Q27RcAacGa33B.1.20.000026
ORF827Q27LcAacTa33B.1.20.000026
ORF827Q27XCaaTaa33B.1.3250.02069
ORF827Q27XCaaTaa33B.1.36.310.005254
ORF827Q27XCaaTaa33B.1.4110.011111
ORF827Q27delCAA---33B.1.4290.000071
ORF827Q27KCaaAaa33B.1.4290.000071
ORF827Q27XCaaTaa33B.1.466.20.001174
ORF827Q27delCAA---33B.1.5090.002597
ORF827Q27delCAA---33B.1.5260.000071
ORF827Q27XCaaTaa33B.1.780.025641
ORF827Q27KCaaAaa33C.370.000348
ORF827Q27delCAA---33P.1.10.000953
ORF827Q27XCaaTaa33P.1.20.003468
ORF827Q27XCaaTaa33P.1.60.005837
ORF827Q27HcaAcaT220.111111
ORF827Q27YCaATaT220.111111
ORF827Q27FCAATTT220.111111
ORF827Q27delCAA---220.111111
ORF827Q27DCaAGaT220.111111
ORF827Q27SCAATCG220.111111
ORF827Q27delCAA---22A.2.20.003378
ORF827Q27XCaaTaa22A.2.5.20.003145
ORF827Q27XCaaTaa22AD.20.000438
ORF827Q27XCaaTaa22AE.80.000978
ORF827Q27SCAATCG22All0
ORF827Q27DCaAGaT22All0
ORF827Q27XCaaTaa22AU.20.004843
ORF827Q27KCaaAaa22AY.1000.000092
ORF827Q27delCAA---22AY.1000.000092
ORF827Q27KCaaAaa22AY.1020.000053
ORF827Q27QcaAcaG22AY.1030.000012
ORF827Q27del2CAA--N12AY.1030.000006
ORF827Q27del2cAAc--12AY.1030.000006
ORF827Q27delCAA---22AY.1140.000462
ORF827Q27XCaaTaa22AY.116.10.000623
ORF827Q27delCAA---22AY.1180.000125
ORF827Q27delCAA---22AY.260.000057
ORF827Q27XCaaTaa22AY.320.001065
ORF827Q27XCaaTaa22AY.34.10.00102
ORF827Q27XCaaTaa22AY.360.000296
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