CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF8 | 24 | S24L | nonsyn | tCa | tTa | 141652 | 141602 | 0.999647 | 27963-27965 | |
ORF8 | 24 | S24L | nonsyn | tCA | tTG | 141652 | 38 | 0.000268263 | 27963-27965 | |
ORF8 | 24 | S24L | nonsyn | TCa | CTa | 141652 | 12 | 0.0000847147 | 27963-27965 | |
ORF8 | 24 | S24del | del | TCA | --- | 526 | 526 | 1 | 27963-27965 | |
ORF8 | 24 | S24S | syn | tcA | tcG | 192 | 102 | 0.53125 | 27963-27965 | |
ORF8 | 24 | S24S | syn | tcA | tcT | 192 | 68 | 0.354167 | 27963-27965 | |
ORF8 | 24 | S24S | syn | tcA | tcC | 192 | 22 | 0.114583 | 27963-27965 | |
ORF8 | 24 | S24P | nonsyn | Tca | Cca | 169 | 169 | 1 | 27963-27965 | |
ORF8 | 24 | S24A | nonsyn | Tca | Gca | 19 | 16 | 0.842105 | 27963-27965 | |
ORF8 | 24 | S24A | nonsyn | TcA | GcG | 19 | 2 | 0.105263 | 27963-27965 | |
ORF8 | 24 | S24A | nonsyn | TcA | GcC | 19 | 1 | 0.0526316 | 27963-27965 | |
ORF8 | 24 | S24F | nonsyn | tCA | tTT | 4 | 4 | 1 | 27963-27965 | |
ORF8 | 24 | S24X | nonsyn | tCa | tAa | 4 | 4 | 1 | 27963-27965 | |
ORF8 | 24 | S24E | nonsyn | TCa | GAa | 4 | 2 | 0.5 | 27963-27965 | |
ORF8 | 24 | S24E | nonsyn | TCA | GAG | 4 | 2 | 0.5 | 27963-27965 | |
ORF8 | 24 | S24T | nonsyn | Tca | Aca | 3 | 3 | 1 | 27963-27965 | |
ORF8 | 24 | S24C | nonsyn | tCA | tGT | 3 | 3 | 1 | 27963-27965 | |
ORF8 | 24 | S24R | nonsyn | TCa | CGa | 2 | 1 | 0.5 | 27963-27965 | |
ORF8 | 24 | S24R | nonsyn | TCa | AGa | 2 | 1 | 0.5 | 27963-27965 | |
ORF8 | 24 | S24Y | nonsyn | tCA | tAT | 1 | 1 | 1 | 27963-27965 | |
ORF8 | 24 | S24K | nonsyn | TCa | AAa | 1 | 1 | 1 | 27963-27965 | |
ORF8 | 24 | S24del2 | del | TCa | --a | 1 | 1 | 1 | 27963-27965 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF8 | 24 | S24L | tCa | tTa | 141602 | 141652 | All | 0.027083 |
ORF8 | 24 | S24L | tCA | tTG | 38 | 141652 | All | 0.000007 |
ORF8 | 24 | S24L | TCa | CTa | 12 | 141652 | All | 0.000002 |
ORF8 | 24 | S24L | tCa | tTa | 109728 | 109767 | B.1.2 | 0.966196 |
ORF8 | 24 | S24L | tCA | tTG | 37 | 109767 | B.1.2 | 0.000326 |
ORF8 | 24 | S24L | TCa | CTa | 2 | 109767 | B.1.2 | 0.000018 |
ORF8 | 24 | S24L | tCa | tTa | 9952 | 9952 | B.1.596 | 0.867201 |
ORF8 | 24 | S24L | tCa | tTa | 7967 | 7974 | B.1 | 0.072974 |
ORF8 | 24 | S24L | TCa | CTa | 7 | 7974 | B.1 | 0.000064 |
ORF8 | 24 | S24L | tCa | tTa | 3629 | 3629 | B.1.595 | 0.947025 |
ORF8 | 24 | S24L | tCa | tTa | 1421 | 1421 | B.1.577 | 0.976632 |
ORF8 | 24 | S24L | tCa | tTa | 1080 | 1080 | B.1.588 | 0.982712 |
ORF8 | 24 | S24L | tCa | tTa | 1054 | 1054 | B.1.160.16 | 0.979554 |
ORF8 | 24 | S24L | tCa | tTa | 942 | 942 | B.1.426 | 0.950555 |
ORF8 | 24 | S24L | tCa | tTa | 761 | 761 | B.1.265 | 0.966963 |
ORF8 | 24 | S24del | TCA | --- | 526 | 526 | All | 0.000101 |
ORF8 | 24 | S24L | tCa | tTa | 519 | 519 | B.1.587 | 0.98482 |
ORF8 | 24 | S24L | tCa | tTa | 361 | 361 | B.1.336 | 0.880488 |
ORF8 | 24 | S24L | tCa | tTa | 300 | 300 | B.1.425 | 0.898204 |
ORF8 | 24 | S24L | tCa | tTa | 288 | 288 | B.1.567 | 0.96 |
ORF8 | 24 | S24L | tCa | tTa | 237 | 237 | B.1.1 | 0.004299 |
ORF8 | 24 | S24L | tCa | tTa | 202 | 202 | B.1.590 | 0.918182 |
ORF8 | 24 | S24S | tcA | tcG | 102 | 192 | All | 0.00002 |
ORF8 | 24 | S24S | tcA | tcT | 68 | 192 | All | 0.000013 |
ORF8 | 24 | S24S | tcA | tcC | 22 | 192 | All | 0.000004 |
ORF8 | 24 | S24L | tCa | tTa | 188 | 188 | B.1.521 | 0.935323 |
ORF8 | 24 | S24P | Tca | Cca | 169 | 169 | All | 0.000032 |
ORF8 | 24 | S24L | tCa | tTa | 167 | 167 | B.1.301 | 0.988166 |
ORF8 | 24 | S24L | tCa | tTa | 148 | 148 | B.1.595.1 | 0.865497 |
ORF8 | 24 | S24L | tCa | tTa | 146 | 146 | B.1.160 | 0.004553 |
ORF8 | 24 | S24L | tCa | tTa | 137 | 137 | B.1.595.4 | 1 |
ORF8 | 24 | S24L | tCa | tTa | 129 | 129 | B.1.589 | 0.977273 |
ORF8 | 24 | S24L | tCa | tTa | 120 | 120 | B.1.370 | 0.96 |
ORF8 | 24 | S24L | tCa | tTa | 117 | 117 | B.1.424 | 0.943548 |
ORF8 | 24 | S24L | tCa | tTa | 114 | 114 | AB.1 | 0.934426 |
ORF8 | 24 | S24L | tCa | tTa | 98 | 98 | B.1.423 | 1 |
ORF8 | 24 | S24L | tCa | tTa | 93 | 93 | B.1.591 | 0.989362 |
ORF8 | 24 | S24L | tCa | tTa | 88 | 88 | B.1.435 | 1 |
ORF8 | 24 | S24L | tCa | tTa | 87 | 87 | B.1.593 | 0.945652 |
ORF8 | 24 | S24del | TCA | --- | 86 | 86 | B.1.1.7 | 0.000077 |
ORF8 | 24 | S24L | tCa | tTa | 78 | 78 | B.1.450 | 0.886364 |
ORF8 | 24 | S24L | tCa | tTa | 73 | 73 | B.4.5 | 0.869048 |
ORF8 | 24 | S24L | tCa | tTa | 70 | 70 | B.1.243 | 0.004871 |
ORF8 | 24 | S24del | TCA | --- | 68 | 68 | AY.4 | 0.000106 |
ORF8 | 24 | S24L | tCa | tTa | 63 | 63 | B.1.284 | 0.828947 |
ORF8 | 24 | S24L | tCa | tTa | 53 | 53 | B.1.177.73 | 0.030011 |
ORF8 | 24 | S24L | tCa | tTa | 44 | 44 | B.1.234 | 0.005806 |
ORF8 | 24 | S24L | tCa | tTa | 41 | 42 | B.1.1.7 | 0.000037 |
ORF8 | 24 | S24L | tCA | tTG | 1 | 42 | B.1.1.7 | 0.000001 |
ORF8 | 24 | S24L | tCa | tTa | 41 | 41 | B.1.429 | 0.000965 |
ORF8 | 24 | S24L | tCa | tTa | 41 | 41 | B.1.566 | 0.788462 |
ORF8 | 24 | S24L | tCa | tTa | 40 | 40 | B.1.177.12 | 0.006068 |
ORF8 | 24 | S24del | TCA | --- | 39 | 39 | AY.29 | 0.000615 |
ORF8 | 24 | S24L | tCa | tTa | 38 | 38 | B.1.595.3 | 1 |
ORF8 | 24 | S24L | tCa | tTa | 36 | 36 | B.1.438.1 | 0.003861 |
ORF8 | 24 | S24del | TCA | --- | 34 | 34 | B.1.243 | 0.002366 |
ORF8 | 24 | S24L | tCa | tTa | 34 | 34 | B.1.526 | 0.000799 |
ORF8 | 24 | S24del | TCA | --- | 33 | 33 | B.1.1.222 | 0.006732 |
ORF8 | 24 | S24L | tCa | tTa | 33 | 33 | B.1.580 | 0.134146 |
ORF8 | 24 | S24P | Tca | Cca | 32 | 32 | B.1.621 | 0.002833 |
ORF8 | 24 | S24L | tCa | tTa | 30 | 30 | B.1.221 | 0.002131 |
ORF8 | 24 | S24L | tCa | tTa | 30 | 30 | B.1.594 | 0.9375 |
ORF8 | 24 | S24L | tCa | tTa | 26 | 26 | B.1.588.1 | 1 |
ORF8 | 24 | S24L | tCa | tTa | 25 | 25 | B.1.592 | 1 |
ORF8 | 24 | S24P | Tca | Cca | 24 | 24 | B.1.1.7 | 0.000021 |
ORF8 | 24 | S24del | TCA | --- | 22 | 22 | B.1.1 | 0.000399 |
ORF8 | 24 | S24L | tCa | tTa | 22 | 22 | B.1.1.335 | 0.285714 |
ORF8 | 24 | S24L | tCa | tTa | 22 | 22 | B.1.177.44 | 0.011417 |
ORF8 | 24 | S24L | tCa | tTa | 22 | 22 | B.1.369 | 0.006275 |
ORF8 | 24 | S24L | tCa | tTa | 22 | 22 | B.1.576 | 0.019946 |
ORF8 | 24 | S24L | tCa | tTa | 21 | 21 | B | 0.002684 |
ORF8 | 24 | S24del | TCA | --- | 21 | 21 | B.1 | 0.000192 |
ORF8 | 24 | S24L | tCa | tTa | 21 | 21 | B.1.1.222 | 0.004284 |
ORF8 | 24 | S24S | tcA | tcT | 20 | 20 | AE.4 | 0.869565 |
ORF8 | 24 | S24L | tCa | tTa | 20 | 20 | B.1.396 | 0.014114 |
ORF8 | 24 | S24A | Tca | Gca | 16 | 19 | All | 0.000003 |
ORF8 | 24 | S24A | TcA | GcG | 2 | 19 | All | 0 |
ORF8 | 24 | S24A | TcA | GcC | 1 | 19 | All | 0 |
ORF8 | 24 | S24L | tCa | tTa | 19 | 19 | AY.44 | 0.000116 |
ORF8 | 24 | S24del | TCA | --- | 18 | 18 | B | 0.002301 |
ORF8 | 24 | S24L | tCa | tTa | 18 | 18 | B.1.595.2 | 0.72 |
ORF8 | 24 | S24L | tCa | tTa | 17 | 17 | B.1.311 | 0.004668 |
ORF8 | 24 | S24L | tCa | tTa | 17 | 17 | B.1.361 | 0.021907 |
ORF8 | 24 | S24L | tCa | tTa | 15 | 15 | AY.3 | 0.000149 |
ORF8 | 24 | S24P | Tca | Cca | 15 | 15 | B.1.1 | 0.000272 |
ORF8 | 24 | S24L | tCa | tTa | 14 | 15 | B.1.206 | 0.011419 |
ORF8 | 24 | S24L | TCa | CTa | 1 | 15 | B.1.206 | 0.000816 |
ORF8 | 24 | S24del | TCA | --- | 14 | 14 | AY.48 | 0.006512 |
ORF8 | 24 | S24L | tCa | tTa | 14 | 14 | B.1.1.519 | 0.000556 |
ORF8 | 24 | S24L | tCa | tTa | 14 | 14 | B.1.367 | 0.011094 |
ORF8 | 24 | S24P | Tca | Cca | 13 | 13 | AY.25 | 0.000078 |
ORF8 | 24 | S24P | Tca | Cca | 13 | 13 | B.1.206 | 0.010604 |
ORF8 | 24 | S24L | tCa | tTa | 13 | 13 | B.1.427 | 0.000656 |
ORF8 | 24 | S24L | tCa | tTa | 12 | 12 | B.1.177 | 0.000158 |
ORF8 | 24 | S24S | tcA | tcT | 7 | 12 | B.1.258 | 0.000466 |
ORF8 | 24 | S24S | tcA | tcC | 5 | 12 | B.1.258 | 0.000333 |
ORF8 | 24 | S24S | tcA | tcG | 12 | 12 | B.1.258.16 | 0.01964 |
ORF8 | 24 | S24L | tCa | tTa | 12 | 12 | B.1.564 | 0.005111 |
ORF8 | 24 | S24L | tCa | tTa | 12 | 12 | B.1.617.2 | 0.000045 |
ORF8 | 24 | S24S | tcA | tcG | 11 | 11 | B.1.1 | 0.0002 |
ORF8 | 24 | S24L | tCa | tTa | 11 | 11 | B.1.582 | 0.005397 |
ORF8 | 24 | S24L | tCa | tTa | 10 | 10 | AY.4 | 0.000016 |
ORF8 | 24 | S24S | tcA | tcG | 10 | 10 | AY.4.2 | 0.000217 |
ORF8 | 24 | S24S | tcA | tcG | 7 | 10 | B.1.1.7 | 0.000006 |
ORF8 | 24 | S24S | tcA | tcC | 2 | 10 | B.1.1.7 | 0.000002 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 10 | B.1.1.7 | 0.000001 |
ORF8 | 24 | S24L | tCa | tTa | 10 | 10 | B.1.375 | 0.008197 |
ORF8 | 24 | S24L | tCa | tTa | 10 | 10 | B.1.621.1 | 0.005058 |
ORF8 | 24 | S24S | tcA | tcT | 4 | 9 | AY.44 | 0.000024 |
ORF8 | 24 | S24S | tcA | tcG | 3 | 9 | AY.44 | 0.000018 |
ORF8 | 24 | S24S | tcA | tcC | 2 | 9 | AY.44 | 0.000012 |
ORF8 | 24 | S24P | Tca | Cca | 9 | 9 | B.1 | 0.000082 |
ORF8 | 24 | S24L | tCa | tTa | 9 | 9 | B.1.1.265 | 0.028391 |
ORF8 | 24 | S24del | TCA | --- | 9 | 9 | B.1.160 | 0.000281 |
ORF8 | 24 | S24P | Tca | Cca | 9 | 9 | B.1.177.86 | 0.001651 |
ORF8 | 24 | S24P | Tca | Cca | 9 | 9 | B.1.617.2 | 0.000034 |
ORF8 | 24 | S24S | tcA | tcG | 6 | 8 | AY.3 | 0.00006 |
ORF8 | 24 | S24S | tcA | tcT | 2 | 8 | AY.3 | 0.00002 |
ORF8 | 24 | S24S | tcA | tcG | 6 | 8 | AY.4 | 0.000009 |
ORF8 | 24 | S24S | tcA | tcT | 2 | 8 | AY.4 | 0.000003 |
ORF8 | 24 | S24L | tCa | tTa | 8 | 8 | B.1.1.507 | 0.069565 |
ORF8 | 24 | S24L | tCa | tTa | 8 | 8 | B.1.126 | 0.010204 |
ORF8 | 24 | S24del | TCA | --- | 8 | 8 | B.1.177 | 0.000105 |
ORF8 | 24 | S24del | TCA | --- | 8 | 8 | B.1.2 | 0.00007 |
ORF8 | 24 | S24L | tCa | tTa | 8 | 8 | B.1.362 | 0.012327 |
ORF8 | 24 | S24L | tCa | tTa | 8 | 8 | B.1.517 | 0.003416 |
ORF8 | 24 | S24L | tCa | tTa | 7 | 7 | AY.103 | 0.000043 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | AY.3 | 0.00007 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | AY.44 | 0.000043 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF8 | 24 | S24L | tCa | tTa | 7 | 7 | B.1.349 | 0.005004 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | B.1.36.16 | 0.009972 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | B.1.617.2 | 0.000026 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | P.1 | 0.00011 |
ORF8 | 24 | S24del | TCA | --- | 7 | 7 | P.1.14 | 0.000335 |
ORF8 | 24 | S24del | TCA | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF8 | 24 | S24del | TCA | --- | 6 | 6 | AY.3.1 | 0.000512 |
ORF8 | 24 | S24L | tCa | tTa | 6 | 6 | B.1.160.14 | 0.012712 |
ORF8 | 24 | S24L | tCa | tTa | 6 | 6 | B.1.240 | 0.001293 |
ORF8 | 24 | S24del | TCA | --- | 6 | 6 | B.1.243.2 | 0.086957 |
ORF8 | 24 | S24A | Tca | Gca | 3 | 5 | 0.166667 | |
ORF8 | 24 | S24A | TcA | GcG | 2 | 5 | 0.111111 | |
ORF8 | 24 | S24S | tcA | tcG | 3 | 5 | AY.103 | 0.000019 |
ORF8 | 24 | S24S | tcA | tcT | 2 | 5 | AY.103 | 0.000012 |
ORF8 | 24 | S24S | tcA | tcC | 4 | 5 | AY.25 | 0.000024 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 5 | AY.25 | 0.000006 |
ORF8 | 24 | S24S | tcA | tcG | 3 | 5 | B.1 | 0.000027 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 5 | B.1 | 0.000009 |
ORF8 | 24 | S24S | tcA | tcC | 1 | 5 | B.1 | 0.000009 |
ORF8 | 24 | S24L | tCa | tTa | 5 | 5 | B.1.1.28 | 0.001556 |
ORF8 | 24 | S24P | Tca | Cca | 5 | 5 | B.1.160 | 0.000156 |
ORF8 | 24 | S24S | tcA | tcT | 5 | 5 | B.1.237 | 0.024876 |
ORF8 | 24 | S24L | tCa | tTa | 5 | 5 | B.1.264 | 0.061728 |
ORF8 | 24 | S24L | tCa | tTa | 5 | 5 | B.1.302 | 0.066667 |
ORF8 | 24 | S24L | tCa | tTa | 5 | 5 | B.1.612 | 0.013263 |
ORF8 | 24 | S24L | tCa | tTa | 5 | 5 | P.1 | 0.000079 |
ORF8 | 24 | S24F | tCA | tTT | 4 | 4 | 0.222222 | |
ORF8 | 24 | S24E | TCa | GAa | 2 | 4 | 0.111111 | |
ORF8 | 24 | S24E | TCA | GAG | 2 | 4 | 0.111111 | |
ORF8 | 24 | S24S | tcA | tcG | 4 | 4 | A.2.5.3 | 0.041237 |
ORF8 | 24 | S24F | tCA | tTT | 4 | 4 | All | 0.000001 |
ORF8 | 24 | S24X | tCa | tAa | 4 | 4 | All | 0.000001 |
ORF8 | 24 | S24E | TCA | GAG | 2 | 4 | All | 0 |
ORF8 | 24 | S24E | TCa | GAa | 2 | 4 | All | 0 |
ORF8 | 24 | S24P | Tca | Cca | 4 | 4 | AY.121 | 0.000541 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | AY.33 | 0.000267 |
ORF8 | 24 | S24del | TCA | --- | 4 | 4 | AY.34 | 0.000388 |
ORF8 | 24 | S24P | Tca | Cca | 4 | 4 | AY.5 | 0.000083 |
ORF8 | 24 | S24S | tcA | tcG | 4 | 4 | AY.75 | 0.000224 |
ORF8 | 24 | S24S | tcA | tcG | 4 | 4 | B.1.1.317 | 0.001647 |
ORF8 | 24 | S24del | TCA | --- | 4 | 4 | B.1.1.519 | 0.000159 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.139 | 0.002933 |
ORF8 | 24 | S24S | tcA | tcG | 4 | 4 | B.1.177.73 | 0.002265 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.324 | 0.006421 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.330 | 0.114286 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.446 | 0.08 |
ORF8 | 24 | S24del | TCA | --- | 4 | 4 | B.1.526 | 0.000094 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.606 | 0.024096 |
ORF8 | 24 | S24S | tcA | tcG | 3 | 4 | B.1.617.2 | 0.000011 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 4 | B.1.617.2 | 0.000004 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.621 | 0.000354 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | B.1.78 | 0.034188 |
ORF8 | 24 | S24L | tCa | tTa | 4 | 4 | P.1.17 | 0.000647 |
ORF8 | 24 | S24P | Tca | Cca | 4 | 4 | Q.1 | 0.000505 |
ORF8 | 24 | S24T | Tca | Aca | 3 | 3 | All | 0.000001 |
ORF8 | 24 | S24C | tCA | tGT | 3 | 3 | All | 0.000001 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | AY.25 | 0.000018 |
ORF8 | 24 | S24P | Tca | Cca | 3 | 3 | AY.4 | 0.000005 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | AY.4.2 | 0.000065 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | AY.43 | 0.000013 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | AY.43 | 0.000013 |
ORF8 | 24 | S24S | tcA | tcC | 2 | 3 | AY.6 | 0.000082 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 3 | AY.6 | 0.000041 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | AY.98.1 | 0.000145 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.1.526 | 0.010638 |
ORF8 | 24 | S24P | Tca | Cca | 3 | 3 | B.1.177 | 0.00004 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.177.52 | 0.005272 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.210 | 0.006397 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.214 | 0.010989 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.258 | 0.0002 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.260 | 0.010033 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.298 | 0.006342 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.338 | 0.025862 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.354 | 0.130435 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.400 | 0.001287 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.413 | 0.012766 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | B.1.429 | 0.000071 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | B.1.509 | 0.002597 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.550 | 0.041096 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.88.1 | 0.014423 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | B.1.9.5 | 0.017045 |
ORF8 | 24 | S24del | TCA | --- | 3 | 3 | P.1.1 | 0.000953 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | P.1.12 | 0.001452 |
ORF8 | 24 | S24L | tCa | tTa | 3 | 3 | R.1 | 0.00027 |
ORF8 | 24 | S24C | tCA | tGT | 2 | 2 | 0.111111 | |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | 0.111111 | |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | A.1 | 0.000564 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | A.2.2 | 0.003378 |
ORF8 | 24 | S24P | Tca | Cca | 2 | 2 | A.2.4 | 0.006734 |
ORF8 | 24 | S24L | TCa | CTa | 1 | 2 | A.2.4 | 0.003367 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 2 | A.2.4 | 0.003367 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | A.21 | 0.00554 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | A.3 | 0.004193 |
ORF8 | 24 | S24R | TCa | AGa | 1 | 2 | All | 0 |
ORF8 | 24 | S24R | TCa | CGa | 1 | 2 | All | 0 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.114 | 0.000462 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.118 | 0.000125 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.25 | 0.000012 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.26 | 0.000057 |
ORF8 | 24 | S24S | tcA | tcT | 2 | 2 | AY.29 | 0.000032 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.37 | 0.000632 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | AY.42 | 0.00008 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.47 | 0.000062 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | AY.84 | 0.000875 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.161 | 0.007067 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.210 | 0.011429 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.1.214 | 0.000111 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.220 | 0.003717 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.251 | 0.015873 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.39 | 0.001019 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.416 | 0.00181 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.1.50 | 0.001358 |
ORF8 | 24 | S24A | Tca | Gca | 2 | 2 | B.1.1.7 | 0.000002 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.1.70 | 0.000682 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.104 | 0.00738 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.110 | 0.00905 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.111 | 0.00235 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.126 | 0.002551 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.157 | 0.00597 |
ORF8 | 24 | S24S | tcA | tcT | 2 | 2 | B.1.177 | 0.000026 |
ORF8 | 24 | S24S | tcA | tcG | 2 | 2 | B.1.177.21 | 0.000153 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.177.6 | 0.001953 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.177.60 | 0.000437 |
ORF8 | 24 | S24P | Tca | Cca | 2 | 2 | B.1.2 | 0.000018 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.212 | 0.033333 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.223 | 0.005556 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.232 | 0.001075 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.239 | 0.002442 |
ORF8 | 24 | S24L | TCa | CTa | 1 | 2 | B.1.258.17 | 0.000104 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 2 | B.1.258.17 | 0.000104 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.305 | 0.004301 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.306 | 0.011429 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.333 | 0.021053 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.340 | 0.008584 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.366 | 0.009756 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.395 | 0.014085 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.404 | 0.002604 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.428 | 0.002041 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.439 | 0.011834 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.443 | 0.009346 |
ORF8 | 24 | S24S | tcA | tcG | 2 | 2 | B.1.470 | 0.002809 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.509 | 0.001732 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.527 | 0.007407 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.561 | 0.000794 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.565 | 0.001621 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.569 | 0.028986 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.609 | 0.000959 |
ORF8 | 24 | S24A | Tca | Gca | 2 | 2 | B.1.617.2 | 0.000008 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.1.621 | 0.000177 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.1.94 | 0.054054 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.4 | 0.004415 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | B.4.1 | 0.037736 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | B.40 | 0.000729 |
ORF8 | 24 | S24A | Tca | Gca | 2 | 2 | P.1 | 0.000032 |
ORF8 | 24 | S24S | tcA | tcC | 2 | 2 | P.1 | 0.000032 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | P.1.1 | 0.000635 |
ORF8 | 24 | S24L | tCa | tTa | 2 | 2 | P.1.10 | 0.000539 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 2 | P.1.17 | 0.000162 |
ORF8 | 24 | S24S | tcA | tcC | 1 | 2 | P.1.17 | 0.000162 |
ORF8 | 24 | S24del | TCA | --- | 2 | 2 | R.1 | 0.00018 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | 0.055556 | |
ORF8 | 24 | S24S | tcA | tcC | 1 | 1 | 0.055556 | |
ORF8 | 24 | S24T | Tca | Aca | 1 | 1 | 0.055556 | |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | A | 0.000387 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | A.1 | 0.000282 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | A.2.5 | 0.000499 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | A.2.5 | 0.000499 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | A.2.5.2 | 0.001572 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AE.4 | 0.043478 |
ORF8 | 24 | S24Y | tCA | tAT | 1 | 1 | All | 0 |
ORF8 | 24 | S24del2 | TCa | --a | 1 | 1 | All | 0 |
ORF8 | 24 | S24K | TCa | AAa | 1 | 1 | All | 0 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.100 | 0.000046 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.102 | 0.000027 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.103 | 0.000006 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.119 | 0.000035 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.119 | 0.000035 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.120 | 0.000037 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.120 | 0.000037 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | AY.120.1 | 0.000321 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.14 | 0.000088 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.19 | 0.00114 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | AY.20 | 0.000039 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | AY.25 | 0.000006 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.26 | 0.000028 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.3 | 0.00001 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.39 | 0.000025 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF8 | 24 | S24S | tcA | tcC | 1 | 1 | AY.42 | 0.00004 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | AY.43 | 0.000004 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | AY.44 | 0.000006 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.46 | 0.000104 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.46.1 | 0.001027 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.46.4 | 0.000165 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.47 | 0.000031 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.54 | 0.000095 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.55 | 0.000917 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.6 | 0.000041 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.61 | 0.000105 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.67 | 0.000464 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.75 | 0.000056 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.75.1 | 0.00018 |
ORF8 | 24 | S24T | Tca | Aca | 1 | 1 | AY.79 | 0.001211 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.86 | 0.00083 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.9 | 0.000068 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | AY.98.1 | 0.000048 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | AY.98.1 | 0.000048 |
ORF8 | 24 | S24Y | tCA | tAT | 1 | 1 | AY.99 | 0.001049 |
ORF8 | 24 | S24C | tCA | tGT | 1 | 1 | AY.99 | 0.001049 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | AY.99.2 | 0.000092 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | B.1 | 0.000009 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.118 | 0.010204 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.121 | 0.002427 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.122 | 0.045455 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.123 | 0.017857 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.135 | 0.004695 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.148 | 0.008772 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.1.161 | 0.003534 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.171 | 0.003676 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.1.172 | 0.018182 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.177 | 0.019231 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.1.181 | 0.004545 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.192 | 0.002309 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.230 | 0.009174 |
ORF8 | 24 | S24X | tCa | tAa | 1 | 1 | B.1.1.237 | 0.005405 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.244 | 0.015385 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.25 | 0.000569 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.258 | 0.003257 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | B.1.1.277 | 0.000759 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.1.282 | 0.011628 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.284 | 0.000107 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.304 | 0.002809 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.316 | 0.000925 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.1.33 | 0.000421 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.350 | 0.04 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.354 | 0.004386 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.356 | 0.008547 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.1.368 | 0.003086 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.370 | 0.012658 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.421 | 0.030303 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.434 | 0.000349 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.44 | 0.00241 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | B.1.1.445 | 0.037037 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | B.1.1.46 | 0.004367 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.461 | 0.012048 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.480 | 0.025 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.1.50 | 0.000679 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.518 | 0.006329 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.1.54 | 0.003021 |
ORF8 | 24 | S24K | TCa | AAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.70 | 0.000341 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.1.72 | 0.030303 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.103 | 0.019231 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.110.3 | 0.000718 |
ORF8 | 24 | S24X | tCa | tAa | 1 | 1 | B.1.118 | 0.006711 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.128 | 0.000635 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.143 | 0.021277 |
ORF8 | 24 | S24T | Tca | Aca | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 24 | S24X | tCa | tAa | 1 | 1 | B.1.177 | 0.000013 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.177.10 | 0.000878 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | B.1.177.43 | 0.001477 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.177.54 | 0.000606 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF8 | 24 | S24A | TcA | GcC | 1 | 1 | B.1.177.63 | 0.002703 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.189 | 0.004292 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.194 | 0.04 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.199 | 0.004132 |
ORF8 | 24 | S24del2 | TCa | --a | 1 | 1 | B.1.2 | 0.000009 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.210 | 0.002132 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.211 | 0.025 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.229 | 0.009709 |
ORF8 | 24 | S24S | tcA | tcC | 1 | 1 | B.1.23 | 0.006061 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | B.1.234 | 0.000132 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.236 | 0.002053 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.241 | 0.000812 |
ORF8 | 24 | S24R | TCa | CGa | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 24 | S24X | tCa | tAa | 1 | 1 | B.1.258 | 0.000067 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.258.12 | 0.007874 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.258.23 | 0.02381 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.279 | 0.000514 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.281 | 0.021739 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.281 | 0.021739 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.325 | 0.006897 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.326 | 0.007576 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.328 | 0.03125 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.343 | 0.020833 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.351 | 0.00003 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.36 | 0.000146 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF8 | 24 | S24A | Tca | Gca | 1 | 1 | B.1.36.19 | 0.009259 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.36.21 | 0.00216 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.36.29 | 0.000517 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.36.38 | 0.001642 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.360 | 0.012658 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.363 | 0.012987 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.378 | 0.006849 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.380 | 0.006623 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.397 | 0.004854 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.400.1 | 0.015152 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.409 | 0.000781 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.416 | 0.001269 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.417 | 0.028571 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | B.1.427 | 0.00005 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.432 | 0.011236 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.433 | 0.003195 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.437 | 0.020833 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.438.1 | 0.000107 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.445 | 0.011765 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.453 | 0.003236 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.459 | 0.004082 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.473 | 0.019231 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.517 | 0.000427 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.525 | 0.000113 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.533 | 0.009615 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.541 | 0.004425 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | B.1.546 | 0.003704 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.546 | 0.003704 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.556 | 0.007519 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.558 | 0.004566 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.568 | 0.001111 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.572 | 0.025 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.574 | 0.002151 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.575 | 0.000303 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.581 | 0.009434 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.599 | 0.00365 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.611 | 0.04 |
ORF8 | 24 | S24R | TCa | AGa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | B.1.619 | 0.000871 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.623 | 0.000536 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | B.1.637 | 0.000073 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.1.67 | 0.043478 |
ORF8 | 24 | S24S | tcA | tcG | 1 | 1 | B.29 | 0.003509 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | B.3 | 0.000831 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | C.26 | 0.007353 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | C.35 | 0.000774 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | C.36.3 | 0.000567 |
ORF8 | 24 | S24P | Tca | Cca | 1 | 1 | C.37 | 0.000116 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | D.2 | 0.000075 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | N.3 | 0.005814 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | N.6 | 0.007092 |
ORF8 | 24 | S24S | tcA | tcT | 1 | 1 | P.1.1 | 0.000318 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | P.1.12 | 0.000484 |
ORF8 | 24 | S24del | TCA | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF8 | 24 | S24L | tCa | tTa | 1 | 1 | P.2 | 0.000187 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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