CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 15

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF815A15deldelGCA---19481948127936-27938
ORF815A15TnonsynGcaAca5835820.99828527936-27938
ORF815A15TnonsynGcAAcC58310.0017152727936-27938
ORF815A15AsyngcAgcG4533580.79028727936-27938
ORF815A15AsyngcAgcT453800.176627936-27938
ORF815A15AsyngcAgcC453150.033112627936-27938
ORF815A15VnonsyngCagTa1811790.9889527936-27938
ORF815A15VnonsyngCAgTG18110.0055248627936-27938
ORF815A15VnonsyngCAgTC18110.0055248627936-27938
ORF815A15EnonsyngCagAa1641610.98170727936-27938
ORF815A15EnonsyngCAgAG16430.018292727936-27938
ORF815A15SnonsynGcaTca53500.94339627936-27938
ORF815A15SnonsynGCAAGC5320.037735827936-27938
ORF815A15SnonsynGCAAGT5310.018867927936-27938
ORF815A15GnonsyngCagGa840.527936-27938
ORF815A15GnonsyngCAgGC820.2527936-27938
ORF815A15GnonsyngCAgGG820.2527936-27938
ORF815A15PnonsynGcaCca760.85714327936-27938
ORF815A15PnonsynGcACcC710.14285727936-27938
ORF815A15LnonsynGCaTTa540.827936-27938
ORF815A15RnonsynGCaAGa530.627936-27938
ORF815A15RnonsynGCAAGG520.427936-27938
ORF815A15LnonsynGCaCTa510.227936-27938
ORF815A15InonsynGCaATa430.7527936-27938
ORF815A15XnonsynGCaTGa420.527936-27938
ORF815A15XnonsynGCaTAa420.527936-27938
ORF815A15KnonsynGCaAAa420.527936-27938
ORF815A15KnonsynGCAAAG420.527936-27938
ORF815A15InonsynGCAATC410.2527936-27938
ORF815A15DnonsyngCAgAC22127936-27938
ORF815A15NnonsynGCAAAC22127936-27938
ORF815A15FnonsynGCATTT11127936-27938
ORF815A15del2delGCA--T11127936-27938

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF815A15delGCA---19481948All0.000373
ORF815A15delGCA---13081308B.1.6230.701717
ORF815A15TGcaAca582583All0.000111
ORF815A15TGcAAcC1583All0
ORF815A15AgcAgcG358453All0.000068
ORF815A15AgcAgcT80453All0.000015
ORF815A15AgcAgcC15453All0.000003
ORF815A15TGcaAca430430AY.40.000669
ORF815A15VgCagTa179181All0.000034
ORF815A15VgCAgTC1181All0
ORF815A15VgCAgTG1181All0
ORF815A15EgCagAa161164All0.000031
ORF815A15EgCAgAG3164All0.000001
ORF815A15delGCA---9797B.1.1.70.000087
ORF815A15EgCagAa8787B.1.1.70.000078
ORF815A15AgcAgcG6786B.1.6090.032119
ORF815A15AgcAgcT1986B.1.6090.009108
ORF815A15delGCA---7171AY.40.000111
ORF815A15AgcAgcG7070R.10.006301
ORF815A15AgcAgcG5865B.1.1.70.000052
ORF815A15AgcAgcT765B.1.1.70.000006
ORF815A15SGcaTca5053All0.00001
ORF815A15SGCAAGC253All0
ORF815A15SGCAAGT153All0
ORF815A15EgCagAa5151AY.50.001053
ORF815A15delGCA---4747B.1.2430.00327
ORF815A15delGCA---3939AY.290.000615
ORF815A15delGCA---3333B.1.1.2220.006732
ORF815A15VgCagTa3232AY.440.000195
ORF815A15VgCagTa2727B.1.1.70.000024
ORF815A15delGCA---2424B.10.00022
ORF815A15delGCA---2323B.1.10.000417
ORF815A15AgcAgcG1821B.10.000165
ORF815A15AgcAgcT221B.10.000018
ORF815A15AgcAgcC121B.10.000009
ORF815A15VgCagTa2020AY.30.000199
ORF815A15VgCagTa2020AY.40.000031
ORF815A15AgcAgcG1820AY.430.00008
ORF815A15AgcAgcT120AY.430.000004
ORF815A15AgcAgcC120AY.430.000004
ORF815A15AgcAgcG1220B.1.617.20.000045
ORF815A15AgcAgcT620B.1.617.20.000023
ORF815A15AgcAgcC220B.1.617.20.000008
ORF815A15AgcAgcG1118AY.440.000067
ORF815A15AgcAgcT718AY.440.000043
ORF815A15delGCA---1818B0.002301
ORF815A15AgcAgcG1717B.400.006193
ORF815A15TGcaAca1616AY.290.000252
ORF815A15delGCA---1515AZ.50.052632
ORF815A15TGcaAca1414AY.430.000062
ORF815A15delGCA---1414AY.480.006512
ORF815A15VgCagTa1414B.1.360.002043
ORF815A15TGcaAca1313B.1.20.000114
ORF815A15AgcAgcG1212AY.550.011009
ORF815A15SGcaTca1112B.1.1.70.00001
ORF815A15SGCAAGT112B.1.1.70.000001
ORF815A15EgCagAa1111AY.200.000428
ORF815A15AgcAgcG1111AY.60.000452
ORF815A15TGcaAca1010B.1.1.70.000009
ORF815A15delGCA---1010B.1.20.000088
ORF815A15TGcaAca1010B.1.617.20.000038
ORF815A15delGCA---99AD.10.037037
ORF815A15delGCA---99AY.29.10.001985
ORF815A15delGCA---99B.1.1600.000281
ORF815A15VgCagTa99B.1.1770.000119
ORF815A15delGCA---99B.1.1770.000119
ORF815A15TGcaAca99B.1.177.540.005458
ORF815A15AgcAgcG89P.10.000126
ORF815A15AgcAgcT19P.10.000016
ORF815A15GgCagGa48All0.000001
ORF815A15GgCAgGC28All0
ORF815A15GgCAgGG28All0
ORF815A15AgcAgcG68AY.40.000009
ORF815A15AgcAgcT28AY.40.000003
ORF815A15TGcaAca88AY.420.000322
ORF815A15delGCA---88B.1.1.3180.002414
ORF815A15AgcAgcT78B.1.1770.000092
ORF815A15AgcAgcC18B.1.1770.000013
ORF815A15PGcaCca67All0.000001
ORF815A15PGcACcC17All0
ORF815A15TGcaAca77AY.1020.000186
ORF815A15SGcaTca77AY.440.000043
ORF815A15delGCA---77AY.440.000043
ORF815A15TGcaAca77AY.9.10.000586
ORF815A15delGCA---77B.1.1.2650.022082
ORF815A15delGCA---77B.1.36.160.009972
ORF815A15delGCA---77B.1.4290.000165
ORF815A15AgcAgcG77B.1.5250.000792
ORF815A15delGCA---77B.1.5260.000165
ORF815A15delGCA---77B.1.617.20.000026
ORF815A15VgCagTa77B.1.617.20.000026
ORF815A15delGCA---77P.10.00011
ORF815A15delGCA---77P.1.140.000335
ORF815A15GgCAgGC260.111111
ORF815A15GgCAgGG260.111111
ORF815A15GgCagGa260.111111
ORF815A15VgCagTa66AY.1030.000037
ORF815A15delGCA---66AY.30.00006
ORF815A15delGCA---66AY.3.10.000512
ORF815A15delGCA---66AY.430.000027
ORF815A15TGcaAca66B.1.10.000109
ORF815A15delGCA---66B.1.243.20.086957
ORF815A15delGCA---66B.1.5960.000523
ORF815A15TGcaAca66C.370.000696
ORF815A15LGCaTTa45All0.000001
ORF815A15RGCaAGa35All0.000001
ORF815A15RGCAAGG25All0
ORF815A15LGCaCTa15All0
ORF815A15TGcaAca55AY.1030.000031
ORF815A15delGCA---55AY.250.00003
ORF815A15EgCagAa55AY.250.00003
ORF815A15SGcaTca55AY.40.000008
ORF815A15AgcAgcT55B.1.1.590.032468
ORF815A15SGcaTca55B.1.258.30.008375
ORF815A15SGcaTca55B.1.617.20.000019
ORF815A15delGCA---440.222222
ORF815A15VgCagTa340.166667
ORF815A15IGCaATa340.166667
ORF815A15KGCAAAG240.111111
ORF815A15EgCAgAG240.111111
ORF815A15KGCaAAa240.111111
ORF815A15RGCaAGa240.111111
ORF815A15XGCaTAa240.111111
ORF815A15XGCaTGa240.111111
ORF815A15EgCagAa240.111111
ORF815A15RGCAAGG240.111111
ORF815A15IGCAATC140.055556
ORF815A15VgCAgTC140.055556
ORF815A15IGCaATa34All0.000001
ORF815A15KGCaAAa24All0
ORF815A15XGCaTAa24All0
ORF815A15XGCaTGa24All0
ORF815A15KGCAAAG24All0
ORF815A15IGCAATC14All0
ORF815A15AgcAgcG44AY.250.000024
ORF815A15AgcAgcT44AY.30.00004
ORF815A15TGcaAca44AY.3.10.000341
ORF815A15delGCA---44AY.340.000388
ORF815A15AgcAgcC44AY.840.00175
ORF815A15delGCA---44AY.98.10.000194
ORF815A15delGCA---44B.1.1.5190.000159
ORF815A15AgcAgcT44B.1.20.000035
ORF815A15delGCA---44B.1.3670.00317
ORF815A15delGCA---44P.1.10.001271
ORF815A15delGCA---33AY.1030.000019
ORF815A15AgcAgcG33AY.1030.000019
ORF815A15AgcAgcG33AY.1180.000188
ORF815A15TGcaAca33AY.30.00003
ORF815A15delGCA---33AY.370.000948
ORF815A15delGCA---33AY.4.20.000065
ORF815A15TGcaAca33AY.440.000018
ORF815A15AgcAgcG33AY.460.000312
ORF815A15AgcAgcC33AY.99.20.000276
ORF815A15VgCagTa33B.10.000027
ORF815A15AgcAgcG33B.1.1.3010.003538
ORF815A15VgCagTa33B.1.1.5260.010638
ORF815A15AgcAgcG33B.1.1600.000094
ORF815A15SGcaTca33B.1.36.290.001552
ORF815A15delGCA---33B.1.5090.002597
ORF815A15delGCA---33B.1.6210.000266
ORF815A15LGCaTTa220.111111
ORF815A15NGCAAAC220.111111
ORF815A15DgCAgAC220.111111
ORF815A15SGCAAGC220.111111
ORF815A15TGcaAca120.055556
ORF815A15TGcAAcC120.055556
ORF815A15delGCA---22A.2.20.003378
ORF815A15delGCA---22AD.20.000438
ORF815A15NGCAAAC22All0
ORF815A15DgCAgAC22All0
ORF815A15AgcAgcG22AY.1020.000053
ORF815A15PGcaCca22AY.1030.000012
ORF815A15delGCA---22AY.1140.000462
ORF815A15delGCA---22AY.1180.000125
ORF815A15VgCagTa22AY.250.000012
ORF815A15delGCA---22AY.260.000057
ORF815A15AgcAgcG22AY.260.000057
ORF815A15AgcAgcT22AY.300.000791
ORF815A15VgCagTa22AY.300.000791
ORF815A15TGcaAca22AY.390.000049
ORF815A15VgCagTa22AY.4.50.000215
ORF815A15AgcAgcG22AY.450.000243
ORF815A15TGcaAca22AY.46.40.000329
ORF815A15AgcAgcT22AY.470.000062
ORF815A15delGCA---22AY.470.000062
ORF815A15TGcaAca22AY.50.000041
ORF815A15AgcAgcG22AY.620.000871
ORF815A15delGCA---22AY.670.000929
ORF815A15AgcAgcG22AY.740.000231
ORF815A15EgCAgAG12B.10.000009
ORF815A15EgCagAa12B.10.000009
ORF815A15VgCagTa22B.1.10.000036
ORF815A15AgcAgcG22B.1.10.000036
ORF815A15delGCA---22B.1.1.2140.000111
ORF815A15delGCA---22B.1.1.3060.000877
ORF815A15delGCA---22B.1.1260.002551
ORF815A15delGCA---22B.1.2580.000133
ORF815A15delGCA---22B.1.360.000292
ORF815A15delGCA---22B.1.36.170.000988
ORF815A15AgcAgcG22B.1.3750.001639
ORF815A15delGCA---22B.1.4270.000101
ORF815A15VgCagTa22B.1.4700.002809
ORF815A15delGCA---22B.400.000729
ORF815A15TGcaAca22C.230.011628
ORF815A15delGCA---22P.1.150.000465
ORF815A15VgCagTa22P.60.006289
ORF815A15delGCA---22R.10.00018
ORF815A15AgcAgcC110.055556
ORF815A15delGCA---11A.20.000662
ORF815A15TGcaAca11A.2.40.003367
ORF815A15delGCA---11A.2.50.000499
ORF815A15delGCA---11A.23.10.000704
ORF815A15delGCA---11AE.40.043478
ORF815A15del2GCA--T11All0
ORF815A15FGCATTT11All0
ORF815A15VgCagTa11AY.1000.000046
ORF815A15AgcAgcT11AY.1000.000046
ORF815A15SGcaTca11AY.1020.000027
ORF815A15delGCA---11AY.1080.001103
ORF815A15TGcaAca11AY.1090.00074
ORF815A15VgCagTa11AY.1190.000035
ORF815A15SGcaTca11AY.1190.000035
ORF815A15AgcAgcT11AY.1190.000035
ORF815A15VgCagTa11AY.200.000039
ORF815A15AgcAgcG11AY.230.00007
ORF815A15VgCagTa11AY.230.00007
ORF815A15GgCagGa11AY.250.000006
ORF815A15TGcaAca11AY.250.000006
ORF815A15TGcaAca11AY.260.000028
ORF815A15TGcaAca11AY.340.000097
ORF815A15EgCagAa11AY.360.000148
ORF815A15EgCagAa11AY.40.000002
ORF815A15PGcACcC11AY.40.000002
ORF815A15AgcAgcG11AY.4.20.000022
ORF815A15AgcAgcT11AY.4.40.000409
ORF815A15VgCagTa11AY.430.000004
ORF815A15EgCagAa11AY.440.000006
ORF815A15PGcaCca11AY.440.000006
ORF815A15VgCagTa11AY.460.000104
ORF815A15delGCA---11AY.46.40.000165
ORF815A15VgCagTa11AY.46.60.000072
ORF815A15SGcaTca11AY.470.000031
ORF815A15VgCagTa11AY.50.000021
ORF815A15PGcaCca11AY.50.000021
ORF815A15TGcaAca11AY.510.000909
ORF815A15AgcAgcG11AY.540.000095
ORF815A15delGCA---11AY.550.000917
ORF815A15delGCA---11AY.610.000105
ORF815A15VgCagTa11AY.650.000533
ORF815A15VgCagTa11AY.740.000116
ORF815A15delGCA---11AY.750.000056
ORF815A15AgcAgcG11AY.790.001211
ORF815A15delGCA---11AY.840.000437
ORF815A15AgcAgcT11AY.860.00083
ORF815A15AgcAgcT11AY.90.000068
ORF815A15delGCA---11AY.90.000068
ORF815A15AgcAgcG11AY.9.20.000037
ORF815A15AgcAgcC11AY.920.000287
ORF815A15TGcaAca11AY.980.000079
ORF815A15TGcaAca11AY.98.10.000048
ORF815A15AgcAgcC11AY.990.001049
ORF815A15delGCA---11AY.99.10.001553
ORF815A15LGCaTTa11AZ.20.000821
ORF815A15RGCaAGa11AZ.50.003509
ORF815A15TGcaAca11B.10.000009
ORF815A15SGcaTca11B.10.000009
ORF815A15LGCaCTa11B.10.000009
ORF815A15PGcaCca11B.10.000009
ORF815A15LGCaTTa11B.1.10.000018
ORF815A15GgCagGa11B.1.10.000018
ORF815A15delGCA---11B.1.1.1740.003378
ORF815A15delGCA---11B.1.1.2160.00089
ORF815A15delGCA---11B.1.1.250.000569
ORF815A15AgcAgcG11B.1.1.2800.003086
ORF815A15delGCA---11B.1.1.2840.000107
ORF815A15AgcAgcT11B.1.1.3180.000302
ORF815A15delGCA---11B.1.1.3540.004386
ORF815A15delGCA---11B.1.1.390.00051
ORF815A15FGCATTT11B.1.1.3960.045455
ORF815A15TGcaAca11B.1.1.4110.014706
ORF815A15TGcaAca11B.1.1.4170.002703
ORF815A15VgCagTa11B.1.1.4320.001266
ORF815A15delGCA---11B.1.1.500.000679
ORF815A15SGcaTca11B.1.1.5190.00004
ORF815A15TGcaAca11B.1.1.5190.00004
ORF815A15delGCA---11B.1.1.700.000341
ORF815A15VgCagTa11B.1.1110.001175
ORF815A15SGcaTca11B.1.1470.000756
ORF815A15SGcaTca11B.1.1770.000013
ORF815A15TGcaAca11B.1.177.570.000281
ORF815A15PGcaCca11B.1.177.630.002703
ORF815A15TGcaAca11B.1.177.70.000165
ORF815A15delGCA---11B.1.177.70.000165
ORF815A15SGcaTca11B.1.177.730.000566
ORF815A15SGcaTca11B.1.177.770.000726
ORF815A15delGCA---11B.1.177.830.001481
ORF815A15VgCagTa11B.1.177.860.000183
ORF815A15delGCA---11B.1.1950.005025
ORF815A15SGcaTca11B.1.20.000009
ORF815A15VgCAgTG11B.1.20.000009
ORF815A15delGCA---11B.1.2100.002132
ORF815A15SGcaTca11B.1.2210.000071
ORF815A15VgCagTa11B.1.2210.000071
ORF815A15TGcaAca11B.1.2400.000216
ORF815A15VgCagTa11B.1.2430.00007
ORF815A15TGcaAca11B.1.2580.000067
ORF815A15TGcaAca11B.1.258.110.000396
ORF815A15delGCA---11B.1.258.120.007874
ORF815A15delGCA---11B.1.258.170.000104
ORF815A15AgcAgcT11B.1.3110.000275
ORF815A15delGCA---11B.1.3240.001605
ORF815A15SGcaTca11B.1.3510.00003
ORF815A15VgCagTa11B.1.3510.00003
ORF815A15delGCA---11B.1.3510.00003
ORF815A15delGCA---11B.1.351.20.000303
ORF815A15TGcaAca11B.1.36.240.006173
ORF815A15AgcAgcG11B.1.36.290.000517
ORF815A15delGCA---11B.1.36.290.000517
ORF815A15AgcAgcT11B.1.3670.000792
ORF815A15AgcAgcG11B.1.3690.000285
ORF815A15VgCagTa11B.1.3690.000285
ORF815A15VgCagTa11B.1.3720.010989
ORF815A15AgcAgcT11B.1.3810.007812
ORF815A15AgcAgcT11B.1.4290.000024
ORF815A15TGcaAca11B.1.466.20.000391
ORF815A15delGCA---11B.1.4680.005714
ORF815A15SGcaTca11B.1.4990.00105
ORF815A15delGCA---11B.1.5060.02381
ORF815A15VgCagTa11B.1.5250.000113
ORF815A15del2GCA--T11B.1.5950.000261
ORF815A15delGCA---11B.1.6090.000479
ORF815A15delGCA---11B.1.617.10.000129
ORF815A15EgCagAa11B.1.617.20.000004
ORF815A15TGcaAca11B.1.6250.002353
ORF815A15delGCA---11B.1.6300.005236
ORF815A15AgcAgcT11B.1.6370.000073
ORF815A15VgCagTa11B.550.00295
ORF815A15delGCA---11C.260.007353
ORF815A15VgCagTa11C.350.000774
ORF815A15delGCA---11N.30.005814
ORF815A15delGCA---11N.60.007092
ORF815A15VgCagTa11P.10.000016
ORF815A15delGCA---11P.1.120.000484
ORF815A15AgcAgcG11P.1.120.000484
ORF815A15TGcaAca11P.1.140.000048
ORF815A15SGcaTca11P.1.150.000232
ORF815A15delGCA---11P.1.170.000162
ORF815A15TGcaAca11P.20.000187
ORF815A15AgcAgcG11P.30.001595
ORF815A15delGCA---11Q.20.000613
ORF815A15VgCagTa11Q.40.000455