CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 13

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF813V13deldelGTA---19181918127930-27932
ORF813V13VsyngtAgtG5184860.93822427930-27932
ORF813V13VsyngtAgtC518190.036679527930-27932
ORF813V13VsyngtAgtT518130.025096527930-27932
ORF813V13InonsynGtaAta352352127930-27932
ORF813V13LnonsynGtaTta97930.95876327930-27932
ORF813V13LnonsynGtATtG9720.020618627930-27932
ORF813V13LnonsynGtaCta9720.020618627930-27932
ORF813V13AnonsyngTagCa88850.96590927930-27932
ORF813V13AnonsyngTAgCC8820.022727327930-27932
ORF813V13AnonsyngTAgCT8810.011363627930-27932
ORF813V13GnonsyngTagGa14130.92857127930-27932
ORF813V13GnonsyngTAgGT1410.071428627930-27932
ORF813V13EnonsyngTagAa99127930-27932
ORF813V13del1delGtATt-420.527930-27932
ORF813V13del1delgtAgt-410.2527930-27932
ORF813V13del1delGTACC-410.2527930-27932
ORF813V13del2delGTA--N320.66666727930-27932
ORF813V13del2delgTAg--310.33333327930-27932
ORF813V13TnonsynGTAACT22127930-27932
ORF813V13MnonsynGtAAtG11127930-27932
ORF813V13DnonsyngTAgAC11127930-27932
ORF813V13KnonsynGTaAAa11127930-27932
ORF813V13FnonsynGtATtT11127930-27932

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF813V13delGTA---19181918All0.000367
ORF813V13delGTA---13081308B.1.6230.701717
ORF813V13VgtAgtG486518All0.000093
ORF813V13VgtAgtC19518All0.000004
ORF813V13VgtAgtT13518All0.000002
ORF813V13IGtaAta352352All0.000067
ORF813V13delGTA---9898B.1.1.70.000088
ORF813V13LGtaTta9397All0.000018
ORF813V13LGtaCta297All0
ORF813V13LGtATtG297All0
ORF813V13AgTagCa8588All0.000016
ORF813V13AgTAgCC288All0
ORF813V13AgTAgCT188All0
ORF813V13VgtAgtG7282B.1.1.70.000064
ORF813V13VgtAgtC982B.1.1.70.000008
ORF813V13VgtAgtT182B.1.1.70.000001
ORF813V13delGTA---7070AY.40.000109
ORF813V13VgtAgtG6363B.1.1.1650.969231
ORF813V13IGtaAta5656B.1.1.70.00005
ORF813V13IGtaAta5252AY.40.000081
ORF813V13delGTA---4747B.1.2430.00327
ORF813V13VgtAgtG4444B.1.617.20.000166
ORF813V13delGTA---3939AY.290.000615
ORF813V13delGTA---3333B.1.1.2220.006732
ORF813V13LGtaTta3233B.1.1.70.000029
ORF813V13LGtaCta133B.1.1.70.000001
ORF813V13VgtAgtG3232D.20.002401
ORF813V13IGtaAta2929AY.1030.00018
ORF813V13VgtAgtG2828AY.1020.000742
ORF813V13IGtaAta2727B.1.177.440.014011
ORF813V13IGtaAta2626B.1.20.000229
ORF813V13VgtAgtG2226B.1.20.000194
ORF813V13VgtAgtT426B.1.20.000035
ORF813V13delGTA---2424B.10.00022
ORF813V13VgtAgtG1823AY.250.000108
ORF813V13VgtAgtC523AY.250.00003
ORF813V13delGTA---2323B.1.10.000417
ORF813V13VgtAgtG2222AY.430.000097
ORF813V13delGTA---1818B0.002301
ORF813V13VgtAgtG1818B.1.177.600.003932
ORF813V13VgtAgtG1717AY.470.000529
ORF813V13IGtaAta1616AY.250.000096
ORF813V13VgtAgtG1415AY.30.000139
ORF813V13VgtAgtT115AY.30.00001
ORF813V13GgTagGa1314All0.000002
ORF813V13GgTAgGT114All0
ORF813V13IGtaAta1414AY.440.000085
ORF813V13delGTA---1414AY.480.006512
ORF813V13IGtaAta1414P.10.000221
ORF813V13VgtAgtG1111AY.1030.000068
ORF813V13AgTagCa1111AY.440.000067
ORF813V13IGtaAta1111AY.910.008035
ORF813V13delGTA---1111B.1.20.000097
ORF813V13AgTagCa910B.10.000082
ORF813V13AgTAgCC110B.10.000009
ORF813V13IGtaAta1010B.1.617.20.000038
ORF813V13delGTA---99AD.10.037037
ORF813V13EgTagAa99All0.000002
ORF813V13delGTA---99AY.29.10.001985
ORF813V13VgtAgtG89AY.40.000012
ORF813V13VgtAgtC19AY.40.000002
ORF813V13LGtaTta99AY.440.000055
ORF813V13VgtAgtG89B.10.000073
ORF813V13VgtAgtT19B.10.000009
ORF813V13delGTA---99B.1.1600.000281
ORF813V13delGTA---99B.1.1770.000119
ORF813V13VgtAgtG88AY.60.000329
ORF813V13delGTA---88B.1.617.20.00003
ORF813V13LGtaTta88B.1.6210.000708
ORF813V13VgtAgtG77AY.630.002708
ORF813V13IGtaAta77B.10.000064
ORF813V13delGTA---77B.1.1.2650.022082
ORF813V13AgTagCa77B.1.1.70.000006
ORF813V13AgTagCa77B.1.1260.008929
ORF813V13IGtaAta77B.1.1770.000092
ORF813V13delGTA---77B.1.36.160.009972
ORF813V13delGTA---77B.1.5260.000165
ORF813V13delGTA---77P.10.00011
ORF813V13delGTA---77P.1.140.000335
ORF813V13delGTA---66AY.30.00006
ORF813V13delGTA---66AY.3.10.000512
ORF813V13VgtAgtG66AY.330.000401
ORF813V13AgTagCa66AY.40.000009
ORF813V13delGTA---66AY.440.000037
ORF813V13VgtAgtG66AY.850.002563
ORF813V13VgtAgtG66B.1.10.000109
ORF813V13delGTA---66B.1.243.20.086957
ORF813V13GgTagGa66B.1.6210.000531
ORF813V13LGtaTta66D.20.00045
ORF813V13VgtAgtG66P.10.000095
ORF813V13LGtaTta350.166667
ORF813V13LGtATtG250.111111
ORF813V13VgtAgtG35AY.440.000018
ORF813V13VgtAgtC25AY.440.000012
ORF813V13IGtaAta55AY.50.000103
ORF813V13AgTagCa55AY.98.10.000242
ORF813V13IGtaAta55B.1.1.5190.000199
ORF813V13IGtaAta55B.1.1600.000156
ORF813V13LGtaTta45B.1.4290.000094
ORF813V13LGtaCta15B.1.4290.000024
ORF813V13delGTA---55B.1.5960.000436
ORF813V13del1GtATt-24All0
ORF813V13del1GTACC-14All0
ORF813V13del1gtAgt-14All0
ORF813V13IGtaAta44AY.1020.000106
ORF813V13LGtaTta44AY.40.000006
ORF813V13delGTA---44AY.430.000018
ORF813V13VgtAgtG44AY.910.002922
ORF813V13delGTA---44AY.98.10.000194
ORF813V13delGTA---44AZ.50.014035
ORF813V13delGTA---44B.1.1.3180.001207
ORF813V13delGTA---44B.1.1.5190.000159
ORF813V13IGtaAta44B.1.2430.000278
ORF813V13delGTA---44B.1.3670.00317
ORF813V13delGTA---44B.1.4290.000094
ORF813V13LGtaTta44B.1.617.20.000015
ORF813V13delGTA---44P.1.10.001271
ORF813V13VgtAgtG230.111111
ORF813V13VgtAgtT130.055556
ORF813V13del2GTA--N23All0
ORF813V13del2gTAg--13All0
ORF813V13IGtaAta33AW.10.009146
ORF813V13VgtAgtG33AY.1000.000138
ORF813V13delGTA---33AY.1030.000019
ORF813V13IGtaAta33AY.1200.000112
ORF813V13AgTagCa33AY.1210.000406
ORF813V13delGTA---33AY.370.000948
ORF813V13VgtAgtG33AY.390.000074
ORF813V13delGTA---33AY.4.20.000065
ORF813V13AgTagCa23AY.430.000009
ORF813V13AgTAgCC13AY.430.000004
ORF813V13VgtAgtG33AY.46.40.000494
ORF813V13IGtaAta33AY.730.001996
ORF813V13IGtaAta33AY.750.000168
ORF813V13VgtAgtG33AY.840.001312
ORF813V13IGtaAta33AY.90.000203
ORF813V13LGtaTta33B.1.3510.000089
ORF813V13VgtAgtG33B.1.36.290.001552
ORF813V13AgTagCa33B.1.4290.000071
ORF813V13delGTA---33B.1.5090.002597
ORF813V13IGtaAta33B.1.5250.000339
ORF813V13IGtaAta33B.1.5700.008824
ORF813V13AgTagCa33B.1.617.20.000011
ORF813V13delGTA---33B.1.6210.000266
ORF813V13IGtaAta33P.20.00056
ORF813V13delGTA---220.111111
ORF813V13del1GtATt-220.111111
ORF813V13TGTAACT220.111111
ORF813V13delGTA---22A.2.20.003378
ORF813V13GgTagGa12A.2.40.003367
ORF813V13GgTAgGT12A.2.40.003367
ORF813V13delGTA---22AD.20.000438
ORF813V13TGTAACT22All0
ORF813V13VgtAgtG22AM.40.007143
ORF813V13AgTagCa22AY.1030.000012
ORF813V13delGTA---22AY.1140.000462
ORF813V13delGTA---22AY.1180.000125
ORF813V13IGtaAta22AY.130.000322
ORF813V13delGTA---22AY.250.000012
ORF813V13VgtAgtG22AY.260.000057
ORF813V13delGTA---22AY.260.000057
ORF813V13LGtaTta22AY.260.000057
ORF813V13VgtAgtG22AY.350.000466
ORF813V13AgTagCa22AY.360.000296
ORF813V13GgTagGa22AY.370.000632
ORF813V13VgtAgtC22AY.39.10.000079
ORF813V13VgtAgtG22AY.4.20.000043
ORF813V13delGTA---22AY.470.000062
ORF813V13delGTA---22AY.670.000929
ORF813V13AgTagCa22AY.750.000112
ORF813V13delGTA---22AY.750.000112
ORF813V13AgTagCa22AY.770.002255
ORF813V13VgtAgtG22AY.920.000575
ORF813V13IGtaAta22AY.98.10.000097
ORF813V13LGtaTta22B.10.000018
ORF813V13delGTA---22B.1.1.2140.000111
ORF813V13LGtaTta22B.1.1.2800.006173
ORF813V13IGtaAta22B.1.1.2840.000215
ORF813V13delGTA---22B.1.1.3060.000877
ORF813V13VgtAgtG22B.1.1.3540.008772
ORF813V13EgTagAa22B.1.1.70.000002
ORF813V13delGTA---22B.1.1260.002551
ORF813V13AgTagCa22B.1.1600.000062
ORF813V13AgTagCa22B.1.20.000018
ORF813V13IGtaAta22B.1.2060.001631
ORF813V13delGTA---22B.1.360.000292
ORF813V13delGTA---22B.1.36.170.000988
ORF813V13VgtAgtG22B.1.36.80.002
ORF813V13delGTA---22B.1.4270.000101
ORF813V13VgtAgtG22B.1.4290.000047
ORF813V13IGtaAta22B.1.4970.00063
ORF813V13AgTagCa22B.1.617.10.000258
ORF813V13IGtaAta22B.1.617.10.000258
ORF813V13delGTA---22B.400.000729
ORF813V13delGTA---22P.1.150.000465
ORF813V13LGtaTta22P.20.000373
ORF813V13delGTA---22R.10.00018
ORF813V13FGtATtT110.055556
ORF813V13IGtaAta11A.20.000662
ORF813V13delGTA---11A.20.000662
ORF813V13VgtAgtT11A.2.40.003367
ORF813V13delGTA---11A.2.50.000499
ORF813V13delGTA---11A.23.10.000704
ORF813V13delGTA---11AE.40.043478
ORF813V13MGtAAtG11All0
ORF813V13FGtATtT11All0
ORF813V13DgTAgAC11All0
ORF813V13KGTaAAa11All0
ORF813V13IGtaAta11AY.10.000396
ORF813V13IGtaAta11AY.1000.000046
ORF813V13LGtaTta11AY.1020.000027
ORF813V13EgTagAa11AY.1030.000006
ORF813V13delGTA---11AY.1080.001103
ORF813V13IGtaAta11AY.1170.000085
ORF813V13VgtAgtG11AY.1170.000085
ORF813V13VgtAgtT11AY.1180.000063
ORF813V13del1GTACC-11AY.1180.000063
ORF813V13LGtaTta11AY.1210.000135
ORF813V13VgtAgtG11AY.160.00038
ORF813V13VgtAgtG11AY.200.000039
ORF813V13VgtAgtG11AY.230.00007
ORF813V13AgTagCa11AY.250.000006
ORF813V13LGtaTta11AY.250.000006
ORF813V13AgTagCa11AY.260.000028
ORF813V13VgtAgtG11AY.290.000016
ORF813V13LGtaTta11AY.30.00001
ORF813V13IGtaAta11AY.30.00001
ORF813V13del2GTA--N11AY.30.00001
ORF813V13VgtAgtG11AY.300.000396
ORF813V13VgtAgtG11AY.320.000532
ORF813V13LGtaTta11AY.330.000067
ORF813V13IGtaAta11AY.330.000067
ORF813V13VgtAgtG11AY.360.000148
ORF813V13AgTagCa11AY.390.000025
ORF813V13IGtaAta11AY.390.000025
ORF813V13LGtaTta11AY.400.000964
ORF813V13AgTagCa11AY.420.00004
ORF813V13del2GTA--N11AY.440.000006
ORF813V13VgtAgtG11AY.460.000104
ORF813V13delGTA---11AY.46.40.000165
ORF813V13VgtAgtG11AY.46.60.000072
ORF813V13IGtaAta11AY.470.000031
ORF813V13EgTagAa11AY.470.000031
ORF813V13AgTagCa11AY.480.000465
ORF813V13VgtAgtG11AY.50.000021
ORF813V13delGTA---11AY.550.000917
ORF813V13VgtAgtG11AY.570.000656
ORF813V13EgTagAa11AY.610.000105
ORF813V13delGTA---11AY.610.000105
ORF813V13IGtaAta11AY.610.000105
ORF813V13VgtAgtG11AY.610.000105
ORF813V13VgtAgtG11AY.750.000056
ORF813V13AgTagCa11AY.75.10.00018
ORF813V13delGTA---11AY.840.000437
ORF813V13delGTA---11AY.90.000068
ORF813V13IGtaAta11AY.9.10.000084
ORF813V13VgtAgtG11AY.960.002075
ORF813V13DgTAgAC11AY.990.001049
ORF813V13delGTA---11AY.99.10.001553
ORF813V13IGtaAta11AY.99.20.000092
ORF813V13VgtAgtG11AZ.50.003509
ORF813V13IGtaAta11B0.000128
ORF813V13del1gtAgt-11B.10.000009
ORF813V13IGtaAta11B.1.10.000018
ORF813V13GgTagGa11B.1.10.000018
ORF813V13AgTagCa11B.1.10.000018
ORF813V13IGtaAta11B.1.1.1610.003534
ORF813V13delGTA---11B.1.1.1740.003378
ORF813V13delGTA---11B.1.1.2160.00089
ORF813V13IGtaAta11B.1.1.2220.000204
ORF813V13delGTA---11B.1.1.250.000569
ORF813V13EgTagAa11B.1.1.2800.003086
ORF813V13MGtAAtG11B.1.1.2800.003086
ORF813V13delGTA---11B.1.1.2840.000107
ORF813V13IGtaAta11B.1.1.3040.002809
ORF813V13AgTAgCT11B.1.1.3150.008475
ORF813V13VgtAgtG11B.1.1.3170.000412
ORF813V13VgtAgtT11B.1.1.3180.000302
ORF813V13VgtAgtG11B.1.1.3260.001761
ORF813V13delGTA---11B.1.1.3540.004386
ORF813V13delGTA---11B.1.1.390.00051
ORF813V13VgtAgtG11B.1.1.3960.045455
ORF813V13IGtaAta11B.1.1.470.005348
ORF813V13delGTA---11B.1.1.500.000679
ORF813V13VgtAgtG11B.1.1.530.013699
ORF813V13VgtAgtG11B.1.1.580.005376
ORF813V13EgTagAa11B.1.1.630.000386
ORF813V13delGTA---11B.1.1.700.000341
ORF813V13AgTagCa11B.1.1770.000013
ORF813V13VgtAgtT11B.1.177.440.000519
ORF813V13VgtAgtG11B.1.177.50.001242
ORF813V13delGTA---11B.1.177.70.000165
ORF813V13LGtaTta11B.1.177.70.000165
ORF813V13delGTA---11B.1.177.830.001481
ORF813V13delGTA---11B.1.1950.005025
ORF813V13GgTagGa11B.1.2100.002132
ORF813V13LGtaTta11B.1.2210.000071
ORF813V13AgTagCa11B.1.2210.000071
ORF813V13delGTA---11B.1.2580.000067
ORF813V13IGtaAta11B.1.2580.000067
ORF813V13delGTA---11B.1.258.120.007874
ORF813V13delGTA---11B.1.258.170.000104
ORF813V13delGTA---11B.1.3240.001605
ORF813V13AgTagCa11B.1.3510.00003
ORF813V13VgtAgtG11B.1.3510.00003
ORF813V13delGTA---11B.1.351.20.000303
ORF813V13delGTA---11B.1.36.290.000517
ORF813V13IGtaAta11B.1.3750.00082
ORF813V13VgtAgtT11B.1.4160.001269
ORF813V13AgTagCa11B.1.416.10.001563
ORF813V13VgtAgtG11B.1.4210.007463
ORF813V13GgTagGa11B.1.4270.00005
ORF813V13LGtaTta11B.1.4270.00005
ORF813V13del2gTAg--11B.1.4290.000024
ORF813V13delGTA---11B.1.4680.005714
ORF813V13delGTA---11B.1.5060.02381
ORF813V13AgTagCa11B.1.5250.000113
ORF813V13AgTagCa11B.1.5260.000024
ORF813V13AgTagCa11B.1.5600.00463
ORF813V13VgtAgtG11B.1.5750.000303
ORF813V13IGtaAta11B.1.5770.000687
ORF813V13delGTA---11B.1.5820.000491
ORF813V13IGtaAta11B.1.5960.000087
ORF813V13delGTA---11B.1.6090.000479
ORF813V13delGTA---11B.1.617.10.000129
ORF813V13IGtaAta11B.1.6210.000089
ORF813V13delGTA---11B.1.6300.005236
ORF813V13IGtaAta11B.1.6350.017544
ORF813V13VgtAgtG11B.1.6370.000073
ORF813V13LGtaTta11B.1.6370.000073
ORF813V13delGTA---11C.260.007353
ORF813V13VgtAgtG11C.370.000116
ORF813V13LGtaTta11C.370.000116
ORF813V13LGtaTta11D.30.005917
ORF813V13delGTA---11N.30.005814
ORF813V13delGTA---11N.60.007092
ORF813V13EgTagAa11P.10.000016
ORF813V13delGTA---11P.1.120.000484
ORF813V13EgTagAa11P.1.170.000162
ORF813V13IGtaAta11P.1.170.000162
ORF813V13delGTA---11P.1.170.000162
ORF813V13VgtAgtG11P.1.170.000162
ORF813V13KGTaAAa11P.1.170.000162
ORF813V13VgtAgtG11P.1.40.000977
ORF813V13VgtAgtG11P.20.000187
ORF813V13GgTagGa11Q.10.000126
ORF813V13delGTA---11Q.20.000613
ORF813V13AgTagCa11Q.80.000165