CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 113

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF8113D113DsyngaCgaT13951395128230-28232
ORF8113D113deldelGAC---456456128230-28232
ORF8113D113YnonsynGacTac397397128230-28232
ORF8113D113VnonsyngAcgTc63560.88888928230-28232
ORF8113D113VnonsyngACgTT6340.063492128230-28232
ORF8113D113VnonsyngACgTA6330.04761928230-28232
ORF8113D113GnonsyngAcgGc44410.93181828230-28232
ORF8113D113GnonsyngACgGA4420.045454528230-28232
ORF8113D113GnonsyngACgGT4410.022727328230-28232
ORF8113D113NnonsynGacAac3030128230-28232
ORF8113D113del1delGac-ac28240.85714328230-28232
ORF8113D113del1delgaCga-2840.14285728230-28232
ORF8113D113HnonsynGacCac2525128230-28232
ORF8113D113EnonsyngaCgaA17160.94117628230-28232
ORF8113D113EnonsyngaCgaG1710.058823528230-28232
ORF8113D113AnonsyngAcgCc15130.86666728230-28232
ORF8113D113AnonsyngACgCT1510.066666728230-28232
ORF8113D113AnonsyngACgCG1510.066666728230-28232
ORF8113D113del2delgACg--55128230-28232
ORF8113D113FnonsynGAcTTc420.528230-28232
ORF8113D113FnonsynGACTTT420.528230-28232
ORF8113D113XnonsynGaCTaA420.528230-28232
ORF8113D113XnonsynGACTGA420.528230-28232
ORF8113D113LnonsynGACTTA22128230-28232
ORF8113D113CnonsynGAcTGc22128230-28232
ORF8113D113TnonsynGAcACc210.528230-28232
ORF8113D113TnonsynGACACG210.528230-28232
ORF8113D113KnonsynGaCAaG11128230-28232
ORF8113D113RnonsynGACAGA11128230-28232

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF8113D113DgaCgaT13951395All0.000267
ORF8113D113delGAC---456456All0.000087
ORF8113D113DgaCgaT439439B.1.1.70.000393
ORF8113D113YGacTac397397All0.000076
ORF8113D113DgaCgaT240240B.1.1.3370.863309
ORF8113D113delGAC---209209B.1.1.70.000187
ORF8113D113DgaCgaT201201AY.40.000313
ORF8113D113DgaCgaT8686AY.440.000523
ORF8113D113VgAcgTc5663All0.000011
ORF8113D113VgACgTT463All0.000001
ORF8113D113VgACgTA363All0.000001
ORF8113D113YGacTac6262B.1.617.20.000233
ORF8113D113delGAC---5656AY.40.000087
ORF8113D113YGacTac5656B.1.1.70.00005
ORF8113D113VgAcgTc5050AY.30.000497
ORF8113D113DgaCgaT4545B.10.000412
ORF8113D113GgAcgGc4144All0.000008
ORF8113D113GgACgGA244All0
ORF8113D113GgACgGT144All0
ORF8113D113YGacTac3737AY.100.019608
ORF8113D113delGAC---3737AY.290.000584
ORF8113D113DgaCgaT3636B.1.1770.000474
ORF8113D113delGAC---3333B.1.2430.002296
ORF8113D113DgaCgaT3131AY.1030.000192
ORF8113D113NGacAac3030All0.000006
ORF8113D113DgaCgaT3030B.1.10.000544
ORF8113D113DgaCgaT3030B.1.20.000264
ORF8113D113del1Gac-ac2428All0.000005
ORF8113D113del1gaCga-428All0.000001
ORF8113D113DgaCgaT2727AY.250.000162
ORF8113D113YGacTac2626B.1.5870.049336
ORF8113D113HGacCac2525All0.000005
ORF8113D113YGacTac2424B.1.10.000435
ORF8113D113YGacTac1717A.23.10.011972
ORF8113D113EgaCgaA1617All0.000003
ORF8113D113EgaCgaG117All0
ORF8113D113GgAcgGc1617B.1.1.70.000014
ORF8113D113GgACgGT117B.1.1.70.000001
ORF8113D113AgAcgCc1315All0.000002
ORF8113D113AgACgCG115All0
ORF8113D113AgACgCT115All0
ORF8113D113DgaCgaT1515AY.380.007489
ORF8113D113YGacTac1515B.10.000137
ORF8113D113DgaCgaT1515B.1.1.2630.023364
ORF8113D113YGacTac1515B.1.6280.005285
ORF8113D113delGAC---1414AY.470.000435
ORF8113D113HGacCac1414B.1.1.70.000013
ORF8113D113DgaCgaT1414B.1.617.20.000053
ORF8113D113del1Gac-ac1313B.1.1.70.000012
ORF8113D113DgaCgaT1313P.10.000205
ORF8113D113delGAC---1212AY.39.10.000475
ORF8113D113YGacTac1111AY.40.000017
ORF8113D113DgaCgaT1111AY.470.000342
ORF8113D113VgACgTT410B.1.2430.000278
ORF8113D113VgACgTA310B.1.2430.000209
ORF8113D113VgAcgTc310B.1.2430.000209
ORF8113D113DgaCgaT1010P.1.10.003177
ORF8113D113DgaCgaT99B.1.1600.000281
ORF8113D113YGacTac88B.1.1.1530.008762
ORF8113D113DgaCgaT77AE.80.003423
ORF8113D113YGacTac77AY.1030.000043
ORF8113D113YGacTac77AY.46.60.000505
ORF8113D113YGacTac77B.1.1.2320.012704
ORF8113D113delGAC---77B.1.36.160.009972
ORF8113D113YGacTac66AY.250.000036
ORF8113D113DgaCgaT66AY.260.00017
ORF8113D113YGacTac66AY.30.00006
ORF8113D113DgaCgaT66AY.430.000027
ORF8113D113YGacTac66AY.430.000027
ORF8113D113delGAC---66AY.910.004383
ORF8113D113delGAC---66B.1.1.2650.018927
ORF8113D113DgaCgaT66B.1.177.120.00091
ORF8113D113YGacTac66B.1.20.000053
ORF8113D113del2gACg--55All0.000001
ORF8113D113delGAC---55AY.1020.000133
ORF8113D113delGAC---55AY.29.10.001103
ORF8113D113YGacTac55B.1.1600.000156
ORF8113D113NGacAac55B.1.1770.000066
ORF8113D113DgaCgaT55B.1.2210.000355
ORF8113D113DgaCgaT55B.1.2580.000333
ORF8113D113XGACTGA24All0
ORF8113D113FGAcTTc24All0
ORF8113D113FGACTTT24All0
ORF8113D113XGaCTaA24All0
ORF8113D113GgAcgGc44AY.440.000024
ORF8113D113YGacTac44AY.680.001095
ORF8113D113DgaCgaT44B.1.1.2670.040404
ORF8113D113DgaCgaT44B.1.1.4850.066667
ORF8113D113del2gACg--44B.1.1.70.000004
ORF8113D113AgAcgCc44B.1.20.000035
ORF8113D113FGACTTT24B.1.2430.000139
ORF8113D113FGAcTTc24B.1.2430.000139
ORF8113D113YGacTac44B.1.4270.000202
ORF8113D113GgAcgGc24B.1.4270.000101
ORF8113D113XGACTGA24B.1.4270.000101
ORF8113D113XGaCTaA24B.1.4270.000101
ORF8113D113GgACgGA24B.1.4270.000101
ORF8113D113DgaCgaT44B.1.466.10.028777
ORF8113D113delGAC---44B.1.617.20.000015
ORF8113D113delGAC---44P.10.000063
ORF8113D113delGAC---44P.1.10.001271
ORF8113D113YGacTac33A.2.50.001497
ORF8113D113DgaCgaT33AY.200.000117
ORF8113D113DgaCgaT33AY.290.000047
ORF8113D113DgaCgaT33AY.330.0002
ORF8113D113delGAC---33AY.430.000013
ORF8113D113YGacTac33AY.470.000093
ORF8113D113delGAC---33AY.50.000062
ORF8113D113DgaCgaT33AY.98.10.000145
ORF8113D113YGacTac33B0.000383
ORF8113D113YGacTac33B.1.1.3330.003229
ORF8113D113DgaCgaT33B.1.1.3480.002389
ORF8113D113DgaCgaT33B.1.1.4340.001046
ORF8113D113delGAC---33B.1.1.5190.000119
ORF8113D113YGacTac33B.1.1.5190.000119
ORF8113D113EgaCgaA33B.1.1.70.000003
ORF8113D113EgaCgaA23B.1.4270.000101
ORF8113D113EgaCgaG13B.1.4270.00005
ORF8113D113DgaCgaT33B.1.5960.000261
ORF8113D113DgaCgaT33B.1.6090.001438
ORF8113D113del1Gac-ac33C.36.30.001702
ORF8113D113DgaCgaT33Q.30.000435
ORF8113D113DgaCgaT33Q.80.000495
ORF8113D113NGacAac220.111111
ORF8113D113LGACTTA22All0
ORF8113D113CGAcTGc22All0
ORF8113D113TGACACG12All0
ORF8113D113TGAcACc12All0
ORF8113D113AgAcgCc22AY.1020.000053
ORF8113D113YGacTac22AY.1020.000053
ORF8113D113DgaCgaT22AY.1020.000053
ORF8113D113GgAcgGc22AY.1030.000012
ORF8113D113delGAC---22AY.1130.000285
ORF8113D113delGAC---22AY.1180.000125
ORF8113D113DgaCgaT22AY.1210.000271
ORF8113D113DgaCgaT22AY.160.000759
ORF8113D113YGacTac22AY.20.000712
ORF8113D113del1Gac-ac12AY.250.000006
ORF8113D113del1gaCga-12AY.250.000006
ORF8113D113YGacTac22AY.330.000134
ORF8113D113VgAcgTc22AY.390.000049
ORF8113D113EgaCgaA22AY.40.000003
ORF8113D113delGAC---22AY.4.20.000043
ORF8113D113GgAcgGc22AY.4.20.000043
ORF8113D113GgAcgGc22AY.430.000009
ORF8113D113YGacTac22AY.440.000012
ORF8113D113DgaCgaT22AY.450.000243
ORF8113D113DgaCgaT22AY.46.30.001867
ORF8113D113delGAC---22AY.480.00093
ORF8113D113DgaCgaT22AY.50.000041
ORF8113D113YGacTac22AY.98.10.000097
ORF8113D113YGacTac22AY.99.20.000184
ORF8113D113NGacAac22B.10.000018
ORF8113D113AgAcgCc22B.1.10.000036
ORF8113D113delGAC---22B.1.10.000036
ORF8113D113NGacAac22B.1.10.000036
ORF8113D113YGacTac22B.1.1.3170.000823
ORF8113D113GgAcgGc22B.1.1.4340.000697
ORF8113D113DgaCgaT22B.1.1.5190.000079
ORF8113D113NGacAac22B.1.1.70.000002
ORF8113D113delGAC---22B.1.1600.000062
ORF8113D113delGAC---22B.1.1770.000026
ORF8113D113GgAcgGc22B.1.1770.000026
ORF8113D113delGAC---22B.1.20.000018
ORF8113D113EgaCgaA22B.1.20.000018
ORF8113D113DgaCgaT22B.1.2340.000264
ORF8113D113DgaCgaT22B.1.2430.000139
ORF8113D113NGacAac22B.1.2430.000139
ORF8113D113LGACTTA22B.1.2430.000139
ORF8113D113DgaCgaT22B.1.258.110.000793
ORF8113D113delGAC---22B.1.360.000292
ORF8113D113CGAcTGc22B.1.4270.000101
ORF8113D113TGACACG12B.1.4270.00005
ORF8113D113TGAcACc12B.1.4270.00005
ORF8113D113AgACgCG12B.1.4270.00005
ORF8113D113AgAcgCc12B.1.4270.00005
ORF8113D113YGacTac22B.1.5950.000522
ORF8113D113NGacAac22B.1.617.20.000008
ORF8113D113del1gaCga-12B.1.617.20.000004
ORF8113D113del1Gac-ac12B.1.617.20.000004
ORF8113D113DgaCgaT22B.1.6210.000177
ORF8113D113DgaCgaT22B.60.00182
ORF8113D113HGacCac22D.20.00015
ORF8113D113YGacTac22P.10.000032
ORF8113D113DgaCgaT11A0.000387
ORF8113D113YGacTac11A0.000387
ORF8113D113DgaCgaT11A.2.5.30.010309
ORF8113D113EgaCgaA11A.280.002646
ORF8113D113YGacTac11AE.80.000489
ORF8113D113RGACAGA11All0
ORF8113D113KGaCAaG11All0
ORF8113D113delGAC---11AY.1080.001103
ORF8113D113DgaCgaT11AY.1100.000113
ORF8113D113YGacTac11AY.1180.000063
ORF8113D113EgaCgaA11AY.1190.000035
ORF8113D113DgaCgaT11AY.120.000316
ORF8113D113delGAC---11AY.1200.000037
ORF8113D113DgaCgaT11AY.140.000088
ORF8113D113YGacTac11AY.200.000039
ORF8113D113del1Gac-ac11AY.200.000039
ORF8113D113DgaCgaT11AY.230.00007
ORF8113D113NGacAac11AY.250.000006
ORF8113D113YGacTac11AY.260.000028
ORF8113D113delGAC---11AY.260.000028
ORF8113D113DgaCgaT11AY.270.000065
ORF8113D113DgaCgaT11AY.30.00001
ORF8113D113delGAC---11AY.30.00001
ORF8113D113GgAcgGc11AY.360.000148
ORF8113D113DgaCgaT11AY.390.000025
ORF8113D113delGAC---11AY.390.000025
ORF8113D113YGacTac11AY.390.000025
ORF8113D113DgaCgaT11AY.39.10.00004
ORF8113D113HGacCac11AY.39.10.00004
ORF8113D113GgAcgGc11AY.40.000002
ORF8113D113AgAcgCc11AY.40.000002
ORF8113D113del2gACg--11AY.40.000002
ORF8113D113YGacTac11AY.4.2.10.000149
ORF8113D113delGAC---11AY.4.50.000107
ORF8113D113YGacTac11AY.420.00004
ORF8113D113AgACgCT11AY.430.000004
ORF8113D113AgAcgCc11AY.440.000006
ORF8113D113delGAC---11AY.440.000006
ORF8113D113EgaCgaA11AY.440.000006
ORF8113D113del1gaCga-11AY.440.000006
ORF8113D113EgaCgaA11AY.460.000104
ORF8113D113DgaCgaT11AY.460.000104
ORF8113D113HGacCac11AY.470.000031
ORF8113D113YGacTac11AY.490.003195
ORF8113D113AgAcgCc11AY.50.000021
ORF8113D113del1Gac-ac11AY.5.30.000337
ORF8113D113DgaCgaT11AY.5.40.000277
ORF8113D113GgAcgGc11AY.60.000041
ORF8113D113YGacTac11AY.60.000041
ORF8113D113DgaCgaT11AY.610.000105
ORF8113D113DgaCgaT11AY.700.000209
ORF8113D113HGacCac11AY.740.000116
ORF8113D113YGacTac11AY.90.000068
ORF8113D113DgaCgaT11AY.910.00073
ORF8113D113NGacAac11AY.99.20.000092
ORF8113D113EgaCgaA11B.10.000009
ORF8113D113delGAC---11B.10.000009
ORF8113D113GgAcgGc11B.1.10.000018
ORF8113D113EgaCgaA11B.1.10.000018
ORF8113D113YGacTac11B.1.1.10.000327
ORF8113D113DgaCgaT11B.1.1.1610.003534
ORF8113D113delGAC---11B.1.1.2140.000055
ORF8113D113delGAC---11B.1.1.2160.00089
ORF8113D113NGacAac11B.1.1.2220.000204
ORF8113D113GgAcgGc11B.1.1.250.000569
ORF8113D113YGacTac11B.1.1.270.00565
ORF8113D113YGacTac11B.1.1.2800.003086
ORF8113D113DgaCgaT11B.1.1.2910.000742
ORF8113D113YGacTac11B.1.1.3030.002762
ORF8113D113DgaCgaT11B.1.1.3120.001912
ORF8113D113DgaCgaT11B.1.1.3150.008475
ORF8113D113YGacTac11B.1.1.3160.000925
ORF8113D113DgaCgaT11B.1.1.3690.000446
ORF8113D113HGacCac11B.1.1.3690.000446
ORF8113D113del1Gac-ac11B.1.1.3690.000446
ORF8113D113NGacAac11B.1.1.3960.045455
ORF8113D113HGacCac11B.1.1.3960.045455
ORF8113D113delGAC---11B.1.1.4130.006897
ORF8113D113YGacTac11B.1.1.500.000679
ORF8113D113GgAcgGc11B.1.1.5190.00004
ORF8113D113DgaCgaT11B.1.1.530.013699
ORF8113D113VgAcgTc11B.1.1.70.000001
ORF8113D113RGACAGA11B.1.1.70.000001
ORF8113D113DgaCgaT11B.1.1.710.006061
ORF8113D113DgaCgaT11B.1.1260.001276
ORF8113D113GgAcgGc11B.1.1600.000031
ORF8113D113YGacTac11B.1.160.80.001289
ORF8113D113AgAcgCc11B.1.1770.000013
ORF8113D113DgaCgaT11B.1.177.560.000668
ORF8113D113YGacTac11B.1.177.630.002703
ORF8113D113delGAC---11B.1.177.70.000165
ORF8113D113YGacTac11B.1.177.730.000566
ORF8113D113NGacAac11B.1.177.810.000189
ORF8113D113YGacTac11B.1.177.870.000728
ORF8113D113delGAC---11B.1.1950.005025
ORF8113D113NGacAac11B.1.20.000009
ORF8113D113GgAcgGc11B.1.20.000009
ORF8113D113del1Gac-ac11B.1.20.000009
ORF8113D113EgaCgaA11B.1.2210.000071
ORF8113D113del1Gac-ac11B.1.2210.000071
ORF8113D113delGAC---11B.1.2580.000067
ORF8113D113GgAcgGc11B.1.258.110.000396
ORF8113D113DgaCgaT11B.1.3200.001245
ORF8113D113DgaCgaT11B.1.3230.020833
ORF8113D113DgaCgaT11B.1.3290.000608
ORF8113D113NGacAac11B.1.3360.002439
ORF8113D113del1Gac-ac11B.1.3510.00003
ORF8113D113delGAC---11B.1.3510.00003
ORF8113D113delGAC---11B.1.351.20.000303
ORF8113D113YGacTac11B.1.351.20.000303
ORF8113D113NGacAac11B.1.360.000146
ORF8113D113DgaCgaT11B.1.36.10.00114
ORF8113D113DgaCgaT11B.1.36.290.000517
ORF8113D113DgaCgaT11B.1.3670.000792
ORF8113D113DgaCgaT11B.1.4000.000429
ORF8113D113NGacAac11B.1.4270.00005
ORF8113D113del1gaCga-11B.1.4270.00005
ORF8113D113KGaCAaG11B.1.4270.00005
ORF8113D113YGacTac11B.1.4290.000024
ORF8113D113HGacCac11B.1.4290.000024
ORF8113D113delGAC---11B.1.4290.000024
ORF8113D113DgaCgaT11B.1.4320.011236
ORF8113D113DgaCgaT11B.1.438.40.021277
ORF8113D113DgaCgaT11B.1.4530.003236
ORF8113D113DgaCgaT11B.1.466.20.000391
ORF8113D113delGAC---11B.1.4680.005714
ORF8113D113YGacTac11B.1.4970.000315
ORF8113D113YGacTac11B.1.5260.000024
ORF8113D113NGacAac11B.1.5800.004065
ORF8113D113delGAC---11B.1.5960.000087
ORF8113D113DgaCgaT11B.1.617.10.000129
ORF8113D113delGAC---11B.1.617.10.000129
ORF8113D113YGacTac11B.1.617.10.000129
ORF8113D113HGacCac11B.1.617.20.000004
ORF8113D113NGacAac11B.1.6210.000089
ORF8113D113YGacTac11B.1.6230.000536
ORF8113D113NGacAac11B.1.6270.00202
ORF8113D113DgaCgaT11B.1.6340.003425
ORF8113D113YGacTac11B.1.6350.017544
ORF8113D113YGacTac11B.1.690.035714
ORF8113D113delGAC---11B.400.000364
ORF8113D113YGacTac11B.6.60.000889
ORF8113D113DgaCgaT11C.20.016129
ORF8113D113delGAC---11C.260.007353
ORF8113D113NGacAac11C.350.000774
ORF8113D113YGacTac11C.360.000911
ORF8113D113YGacTac11C.36.30.000567
ORF8113D113YGacTac11C.370.000116
ORF8113D113HGacCac11C.370.000116
ORF8113D113DgaCgaT11C.370.000116
ORF8113D113YGacTac11D.20.000075
ORF8113D113delGAC---11D.20.000075
ORF8113D113HGacCac11P.10.000016
ORF8113D113YGacTac11P.1.100.000269
ORF8113D113DgaCgaT11P.1.140.000048
ORF8113D113delGAC---11P.1.150.000232
ORF8113D113delGAC---11Q.20.000613
ORF8113D113DgaCgaT11Q.40.000455
ORF8113D113delGAC---11Q.80.000165
ORF8113D113delGAC---11R.10.00009
ORF8113D113DgaCgaT11XA0.022222