CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 11

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF811T11InonsynaCaaTa58429584270.99996627924-27926
ORF811T11InonsynaCAaTT5842920.000034229627924-27926
ORF811T11KnonsynaCaaAa1415914159127924-27926
ORF811T11deldelACA---18681868127924-27926
ORF811T11TsynacAacG3012600.86378727924-27926
ORF811T11TsynacAacT301360.11960127924-27926
ORF811T11TsynacAacC30150.016611327924-27926
ORF811T11AnonsynAcaGca2062050.99514627924-27926
ORF811T11AnonsynAcAGcC20610.0048543727924-27926
ORF811T11del1delAca-ca88810.92045527924-27926
ORF811T11del1delAcATc-8840.045454527924-27926
ORF811T11del1delAcANc-8810.011363627924-27926
ORF811T11del1delaCaa-a8810.011363627924-27926
ORF811T11del1delacAac-8810.011363627924-27926
ORF811T11PnonsynAcaCca35320.91428627924-27926
ORF811T11PnonsynAcACcT3520.057142927924-27926
ORF811T11PnonsynAcACcC3510.028571427924-27926
ORF811T11SnonsynAcaTca19180.94736827924-27926
ORF811T11SnonsynAcATcG1910.052631627924-27926
ORF811T11MnonsynaCAaTG99127924-27926
ORF811T11del2delACAG--860.7527924-27926
ORF811T11del2delACa--a820.2527924-27926
ORF811T11RnonsynaCaaGa66127924-27926
ORF811T11XnonsynACaTAa66127924-27926
ORF811T11LnonsynACACTT420.527924-27926
ORF811T11LnonsynACaCTa420.527924-27926
ORF811T11VnonsynACaGTa22127924-27926
ORF811T11QnonsynACaCAa22127924-27926
ORF811T11HnonsynACACAC11127924-27926
ORF811T11DnonsynACAGAC11127924-27926

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF811T11IaCaaTa5842758429All0.011175
ORF811T11IaCAaTT258429All0
ORF811T11IaCaaTa4147641476B.1.5260.974874
ORF811T11KaCaaAa1415914159All0.002708
ORF811T11IaCaaTa1359113591B.1.6370.993131
ORF811T11KaCaaAa1109911099B.1.6210.982473
ORF811T11KaCaaAa19551955B.1.621.10.988872
ORF811T11delACA---18681868All0.000357
ORF811T11delACA---13011301B.1.6230.697961
ORF811T11IaCaaTa10001000B.10.00916
ORF811T11KaCaaAa336336B.1.1.500.228106
ORF811T11TacAacG260301All0.00005
ORF811T11TacAacT36301All0.000007
ORF811T11TacAacC5301All0.000001
ORF811T11IaCaaTa271271B.1.10.004916
ORF811T11IaCaaTa221221B.1.20.001946
ORF811T11AAcaGca205206All0.000039
ORF811T11AAcAGcC1206All0
ORF811T11IaCaaTa186186AY.440.001132
ORF811T11KaCaaAa174174B.10.001594
ORF811T11IaCaaTa164164B.1.1.70.000147
ORF811T11TacAacG119119C.370.013812
ORF811T11KaCaaAa119119C.380.959677
ORF811T11IaCaaTa117117B.1.6360.785235
ORF811T11delACA---9292B.1.1.70.000082
ORF811T11del1Aca-ca8188All0.000015
ORF811T11del1AcATc-488All0.000001
ORF811T11del1aCaa-a188All0
ORF811T11del1AcANc-188All0
ORF811T11del1acAac-188All0
ORF811T11AAcaGca8383B.1.1.70.000074
ORF811T11del1Aca-ca6671B.1.1.70.000059
ORF811T11del1AcATc-471B.1.1.70.000004
ORF811T11del1AcANc-171B.1.1.70.000001
ORF811T11delACA---6868AY.40.000106
ORF811T11IaCaaTa6060B.1.6230.032189
ORF811T11IaCaaTa5858AY.40.00009
ORF811T11IaCaaTa5454AY.1030.000335
ORF811T11IaCaaTa5151B.1.1.5190.002025
ORF811T11IaCaaTa4747B.1.617.20.000177
ORF811T11IaCaaTa4545B.1.177.590.725806
ORF811T11KaCaaAa4141B.1.1.70.000037
ORF811T11delACA---3939AY.290.000615
ORF811T11IaCaaTa3737B.1.1770.000487
ORF811T11PAcaCca3235All0.000006
ORF811T11PAcACcT235All0
ORF811T11PAcACcC135All0
ORF811T11delACA---3535B.1.2430.002435
ORF811T11delACA---3333B.1.1.2220.006732
ORF811T11AAcaGca3333B.1.2210.002344
ORF811T11IaCaaTa3333B.1.3460.04325
ORF811T11KaCaaAa3333B.1.6230.017704
ORF811T11IaCaaTa3232B.1.4290.000753
ORF811T11IaCaaTa2626AY.1000.001196
ORF811T11KaCaaAa2626B.1.10.000472
ORF811T11IaCaaTa2525P.10.000394
ORF811T11IaCaaTa2424B.1.1.4830.923077
ORF811T11PAcaCca2424B.1.177.661
ORF811T11IaCaaTa2424B.1.177.70.003956
ORF811T11IaCaaTa2424B.1.177.730.01359
ORF811T11KaCaaAa2323AY.30.000229
ORF811T11TacAacG2123AY.40.000033
ORF811T11TacAacT223AY.40.000003
ORF811T11IaCaaTa2323AY.7.20.012864
ORF811T11delACA---2323B.10.000211
ORF811T11delACA---2323B.1.10.000417
ORF811T11KaCaaAa2323B.1.617.20.000087
ORF811T11IaCaaTa2222B0.002812
ORF811T11IaCaaTa2121B.1.1.280.006536
ORF811T11IaCaaTa2121B.1.1.3120.040153
ORF811T11SAcaTca1819All0.000003
ORF811T11SAcATcG119All0
ORF811T11IaCaaTa1919AY.250.000114
ORF811T11IaCaaTa1919AY.430.000084
ORF811T11IaCaaTa1919B.1.177.580.0253
ORF811T11delACA---1818B0.002301
ORF811T11IaCaaTa1818B.1.1.3050.069498
ORF811T11IaCaaTa1818B.1.1.4340.006274
ORF811T11IaCaaTa1818B.1.1890.077253
ORF811T11IaCaaTa1818B.1.258.170.001871
ORF811T11KaCaaAa1717AY.40.000026
ORF811T11IaCaaTa1616B.1.2210.001137
ORF811T11IaCaaTa1515B.1.596.10.140187
ORF811T11delACA---1414AY.480.006512
ORF811T11KaCaaAa1414B.1.1.2840.001504
ORF811T11KaCaaAa1414B.1.20.000123
ORF811T11KaCaaAa1414B.1.3510.000416
ORF811T11IaCaaTa1313B.1.1.2240.185714
ORF811T11IaCaaTa1313B.1.2430.000905
ORF811T11IaCaaTa1313B.1.2580.000865
ORF811T11IaCaaTa1313B.1.4270.000656
ORF811T11KaCaaAa1212B0.001534
ORF811T11TacAacT812B.10.000073
ORF811T11TacAacC212B.10.000018
ORF811T11TacAacG212B.10.000018
ORF811T11IaCaaTa1111A.190.103774
ORF811T11IaCaaTa1111AY.30.000109
ORF811T11delACA---1111B.1.20.000097
ORF811T11IaCaaTa1111B.1.5960.000959
ORF811T11IaCaaTa1010AY.50.000206
ORF811T11TacAacT1010AY.920.002873
ORF811T11IaCaaTa1010B.1.1.5260.035461
ORF811T11IaCaaTa1010B.1.1600.000312
ORF811T11IaCaaTa1010B.1.258.140.009804
ORF811T11KaCaaAa1010P.10.000158
ORF811T11AAcaGca99A.10.002537
ORF811T11MaCAaTG99All0.000002
ORF811T11TacAacG99AY.250.000054
ORF811T11delACA---99AY.29.10.001985
ORF811T11KaCaaAa99AY.430.00004
ORF811T11delACA---99B.1.1600.000281
ORF811T11delACA---99B.1.1770.000119
ORF811T11TacAacG79B.1.617.20.000026
ORF811T11TacAacT29B.1.617.20.000008
ORF811T11del2ACAG--68All0.000001
ORF811T11del2ACa--a28All0
ORF811T11IaCaaTa88AY.1110.001465
ORF811T11IaCaaTa88AY.200.000311
ORF811T11IaCaaTa88B.1.1.3980.025806
ORF811T11delACA---88B.1.617.20.00003
ORF811T11IaCaaTa88C.370.000929
ORF811T11AAcaGca88P.10.000126
ORF811T11IaCaaTa77A0.002709
ORF811T11IaCaaTa77AY.260.000198
ORF811T11IaCaaTa77AY.290.00011
ORF811T11IaCaaTa77AY.390.000173
ORF811T11delACA---77AY.440.000043
ORF811T11AAcaGca67B.10.000055
ORF811T11AAcAGcC17B.10.000009
ORF811T11IaCaaTa77B.1.1.1760.003076
ORF811T11IaCaaTa77B.1.1.2200.013011
ORF811T11delACA---77B.1.1.2650.022082
ORF811T11IaCaaTa77B.1.1.2940.008861
ORF811T11IaCaaTa77B.1.1.3260.012324
ORF811T11AAcaGca77B.1.1.4340.00244
ORF811T11IaCaaTa77B.1.1.630.002701
ORF811T11del2ACAG--67B.1.1.70.000005
ORF811T11del2ACa--a17B.1.1.70.000001
ORF811T11IaCaaTa77B.1.214.20.004197
ORF811T11IaCaaTa77B.1.2410.005682
ORF811T11KaCaaAa77B.1.2430.000487
ORF811T11IaCaaTa77B.1.360.001021
ORF811T11delACA---77B.1.36.160.009972
ORF811T11delACA---77B.1.5260.000165
ORF811T11IaCaaTa77B.1.6090.003356
ORF811T11delACA---77P.10.00011
ORF811T11delACA---77P.1.140.000335
ORF811T11KaCaaAa77P.1.150.001626
ORF811T11XACaTAa66All0.000001
ORF811T11RaCaaGa66All0.000001
ORF811T11TacAacG66AY.230.000418
ORF811T11TacAacG66AY.30.00006
ORF811T11delACA---66AY.30.00006
ORF811T11delACA---66AY.3.10.000512
ORF811T11TacAacG66AY.390.000148
ORF811T11TacAacG56AY.430.000022
ORF811T11TacAacC16AY.430.000004
ORF811T11KaCaaAa66AY.440.000037
ORF811T11TacAacT36AY.50.000062
ORF811T11TacAacG36AY.50.000062
ORF811T11IaCaaTa66B.1.1.2140.000333
ORF811T11KaCaaAa66B.1.1.250.003411
ORF811T11KaCaaAa66B.1.1.3180.001811
ORF811T11IaCaaTa66B.1.1.3690.002677
ORF811T11TacAacG56B.1.1.70.000004
ORF811T11TacAacT16B.1.1.70.000001
ORF811T11TacAacG66B.1.1470.004535
ORF811T11delACA---66B.1.243.20.086957
ORF811T11IaCaaTa66B.1.4130.025532
ORF811T11IaCaaTa66P.1.140.000287
ORF811T11IaCaaTa66Q.80.000989
ORF811T11KaCaaAa55A0.001935
ORF811T11AAcaGca55AY.1030.000031
ORF811T11TacAacG55AY.130.000805
ORF811T11IaCaaTa55AY.140.00044
ORF811T11IaCaaTa55B.1.1.1350.023474
ORF811T11KaCaaAa55B.1.1.280.001556
ORF811T11IaCaaTa55B.1.1.2840.000537
ORF811T11TacAacG55B.1.1.4160.004525
ORF811T11SAcaTca55B.1.1.70.000004
ORF811T11PAcaCca55B.1.20.000044
ORF811T11IaCaaTa55B.1.2390.006105
ORF811T11IaCaaTa55B.1.3200.006227
ORF811T11MaCAaTG55B.1.5260.000118
ORF811T11IaCaaTa55B.60.00455
ORF811T11TacAacG55B.6.60.004444
ORF811T11IaCaaTa55P.1.10.001588
ORF811T11IaCaaTa55P.1.120.00242
ORF811T11PAcACcT240.111111
ORF811T11IaCAaTT240.111111
ORF811T11LACACTT240.111111
ORF811T11IaCaaTa240.111111
ORF811T11PAcaCca240.111111
ORF811T11LACaCTa240.111111
ORF811T11LACaCTa24All0
ORF811T11LACACTT24All0
ORF811T11IaCaaTa44AY.1020.000106
ORF811T11KaCaaAa44AY.1020.000106
ORF811T11KaCaaAa44AY.200.000155
ORF811T11KaCaaAa44AY.250.000024
ORF811T11TacAacG34AY.260.000085
ORF811T11TacAacT14AY.260.000028
ORF811T11IaCaaTa44AY.3.10.000341
ORF811T11AAcaGca44AY.40.000006
ORF811T11IaCaaTa44AY.420.000161
ORF811T11delACA---44AY.430.000018
ORF811T11TacAacG44AY.440.000024
ORF811T11IaCaaTa44AY.770.00451
ORF811T11KaCaaAa44AY.9.20.000147
ORF811T11KaCaaAa44B.1.1.1570.003653
ORF811T11TacAacG44B.1.1.2160.003562
ORF811T11IaCaaTa44B.1.1.2220.000816
ORF811T11KaCaaAa44B.1.1.3060.001754
ORF811T11IaCaaTa44B.1.1.3910.034188
ORF811T11IaCaaTa44B.1.1.5070.034783
ORF811T11delACA---44B.1.1.5190.000159
ORF811T11KaCaaAa44B.1.1.990.095238
ORF811T11KaCaaAa44B.1.1770.000053
ORF811T11AAcaGca44B.1.1770.000053
ORF811T11IaCaaTa44B.1.177.870.002911
ORF811T11XACaTAa44B.1.2430.000278
ORF811T11KaCaaAa44B.1.2580.000266
ORF811T11IaCaaTa44B.1.3110.001098
ORF811T11delACA---44B.1.3670.00317
ORF811T11KaCaaAa44B.1.4290.000094
ORF811T11IaCaaTa44B.1.5040.125
ORF811T11KaCaaAa44B.1.5330.038462
ORF811T11IaCaaTa44B.1.5440.024096
ORF811T11IaCaaTa44B.1.5610.001588
ORF811T11IaCaaTa44B.1.5750.001214
ORF811T11AAcaGca44B.1.617.20.000015
ORF811T11IaCaaTa44B.1.6180.016129
ORF811T11delACA---44P.1.10.001271
ORF811T11IaCaaTa44P.1.100.001078
ORF811T11KaCaaAa44P.1.170.000647
ORF811T11KaCaaAa33AD.20.000657
ORF811T11TacAacT33AE.80.001467
ORF811T11TacAacG33AY.1020.00008
ORF811T11delACA---33AY.1030.000019
ORF811T11KaCaaAa33AY.1030.000019
ORF811T11IaCaaTa33AY.1170.000254
ORF811T11IaCaaTa33AY.1180.000188
ORF811T11TacAacG33AY.290.000047
ORF811T11AAcaGca33AY.350.000699
ORF811T11delACA---33AY.370.000948
ORF811T11KaCaaAa33AY.39.10.000119
ORF811T11delACA---33AY.4.20.000065
ORF811T11AAcaGca33AY.440.000018
ORF811T11IaCaaTa33AY.46.60.000217
ORF811T11KaCaaAa33AY.470.000093
ORF811T11KaCaaAa33AY.50.000062
ORF811T11IaCaaTa33AY.980.000237
ORF811T11delACA---33AY.98.10.000145
ORF811T11AAcaGca33B.1.10.000054
ORF811T11TacAacG33B.1.10.000054
ORF811T11IaCaaTa33B.1.1.3170.001235
ORF811T11TacAacG23B.1.1.3170.000823
ORF811T11TacAacT13B.1.1.3170.000412
ORF811T11IaCaaTa33B.1.1.3540.013158
ORF811T11IaCaaTa33B.1.1.3970.006757
ORF811T11IaCaaTa33B.1.1.4200.003018
ORF811T11KaCaaAa33B.1.1.5190.000119
ORF811T11KaCaaAa33B.1.1570.008955
ORF811T11IaCaaTa33B.1.160.160.002788
ORF811T11KaCaaAa33B.1.160.230.014493
ORF811T11KaCaaAa33B.1.177.730.001699
ORF811T11del1Aca-ca33B.1.177.820.001432
ORF811T11TacAacT23B.1.20.000018
ORF811T11TacAacC13B.1.20.000009
ORF811T11KaCaaAa33B.1.2230.008333
ORF811T11del1Aca-ca33B.1.3510.000089
ORF811T11IaCaaTa33B.1.3510.000089
ORF811T11KaCaaAa33B.1.3800.019868
ORF811T11delACA---33B.1.4290.000071
ORF811T11delACA---33B.1.5090.002597
ORF811T11IaCaaTa33B.1.5300.021429
ORF811T11KaCaaAa33B.1.5610.001191
ORF811T11IaCaaTa33B.1.5760.00272
ORF811T11IaCaaTa33B.1.5770.002062
ORF811T11IaCaaTa33B.1.5870.005693
ORF811T11IaCaaTa33B.1.617.10.000387
ORF811T11delACA---33B.1.6210.000266
ORF811T11IaCaaTa33B.1.6250.007059
ORF811T11IaCaaTa33B.310.011194
ORF811T11KaCaaAa33B.460.0625
ORF811T11IaCaaTa33B.6.60.002667
ORF811T11KaCaaAa33C.36.3.10.008152
ORF811T11SAcaTca33C.370.000348
ORF811T11IaCaaTa33P.1.150.000697
ORF811T11AAcaGca33P.1.150.000697
ORF811T11IaCaaTa33P.1.170.000485
ORF811T11delACA---220.111111
ORF811T11VACaGTa220.111111
ORF811T11AAcaGca220.111111
ORF811T11TacAacT220.111111
ORF811T11IaCaaTa22A.10.000564
ORF811T11IaCaaTa22A.110.117647
ORF811T11KaCaaAa22A.20.001324
ORF811T11delACA---22A.2.20.003378
ORF811T11IaCaaTa22A.2.50.000998
ORF811T11IaCaaTa22A.50.003846
ORF811T11delACA---22AD.20.000438
ORF811T11VACaGTa22All0
ORF811T11QACaCAa22All0
ORF811T11TacAacG22AY.1030.000012
ORF811T11IaCaaTa22AY.1130.000285
ORF811T11delACA---22AY.1140.000462
ORF811T11delACA---22AY.1180.000125
ORF811T11TacAacG22AY.1190.000071
ORF811T11IaCaaTa22AY.1200.000074
ORF811T11IaCaaTa22AY.20.000712
ORF811T11TacAacG22AY.200.000078
ORF811T11delACA---22AY.250.000012
ORF811T11delACA---22AY.260.000057
ORF811T11KaCaaAa22AY.260.000057
ORF811T11IaCaaTa22AY.4.20.000043
ORF811T11KaCaaAa22AY.46.60.000144
ORF811T11delACA---22AY.470.000062
ORF811T11IaCaaTa22AY.470.000062
ORF811T11del1Aca-ca22AY.520.001629
ORF811T11IaCaaTa22AY.520.001629
ORF811T11KaCaaAa22AY.580.001815
ORF811T11IaCaaTa22AY.60.000082
ORF811T11delACA---22AY.670.000929
ORF811T11delACA---22AY.750.000112
ORF811T11TacAacG22AY.850.000854
ORF811T11RaCaaGa22AY.940.000885
ORF811T11IaCaaTa22AY.98.10.000097
ORF811T11KaCaaAa22AZ.40.006711
ORF811T11delACA---22AZ.50.007018
ORF811T11IaCaaTa22B.1.1.2080.02439
ORF811T11delACA---22B.1.1.2140.000111
ORF811T11KaCaaAa22B.1.1.2160.001781
ORF811T11TacAacG22B.1.1.2220.000408
ORF811T11IaCaaTa22B.1.1.2650.006309
ORF811T11KaCaaAa22B.1.1.2770.001517
ORF811T11QACaCAa22B.1.1.2800.006173
ORF811T11IaCaaTa22B.1.1.2960.036364
ORF811T11delACA---22B.1.1.3060.000877
ORF811T11IaCaaTa22B.1.1.340.026316
ORF811T11TacAacG22B.1.1.3540.008772
ORF811T11IaCaaTa22B.1.1.4320.002532
ORF811T11IaCaaTa22B.1.1.4640.002946
ORF811T11AAcaGca22B.1.1.5190.000079
ORF811T11IaCaaTa22B.1.1.5220.034483
ORF811T11KaCaaAa22B.1.1.630.000772
ORF811T11delACA---22B.1.1260.002551
ORF811T11IaCaaTa22B.1.1570.00597
ORF811T11del1Aca-ca22B.1.1600.000062
ORF811T11KaCaaAa22B.1.1600.000062
ORF811T11IaCaaTa22B.1.177.120.000303
ORF811T11IaCaaTa22B.1.177.330.003289
ORF811T11IaCaaTa22B.1.177.440.001038
ORF811T11IaCaaTa22B.1.177.600.000437
ORF811T11KaCaaAa22B.1.177.810.000379
ORF811T11AAcaGca22B.1.20.000018
ORF811T11IaCaaTa22B.1.2340.000264
ORF811T11KaCaaAa22B.1.2790.001027
ORF811T11TacAacG22B.1.2790.001027
ORF811T11KaCaaAa22B.1.3110.000549
ORF811T11IaCaaTa22B.1.3240.00321
ORF811T11IaCaaTa22B.1.3360.004878
ORF811T11TacAacG22B.1.3510.000059
ORF811T11IaCaaTa22B.1.3560.003454
ORF811T11delACA---22B.1.360.000292
ORF811T11KaCaaAa22B.1.360.000292
ORF811T11delACA---22B.1.36.170.000988
ORF811T11SAcaTca22B.1.3620.003082
ORF811T11IaCaaTa22B.1.416.10.003125
ORF811T11delACA---22B.1.4270.000101
ORF811T11AAcaGca22B.1.4270.000101
ORF811T11KaCaaAa22B.1.4270.000101
ORF811T11KaCaaAa22B.1.4590.008163
ORF811T11IaCaaTa22B.1.4990.002101
ORF811T11AAcaGca22B.1.5090.001732
ORF811T11IaCaaTa22B.1.5380.016129
ORF811T11IaCaaTa22B.1.5670.006667
ORF811T11IaCaaTa22B.1.5800.00813
ORF811T11TacAacG22B.1.6270.00404
ORF811T11IaCaaTa22B.1.6280.000705
ORF811T11MaCAaTG22B.1.6370.000146
ORF811T11KaCaaAa22B.1.780.017094
ORF811T11IaCaaTa22B.290.007018
ORF811T11IaCaaTa22B.3.10.003317
ORF811T11delACA---22B.400.000729
ORF811T11IaCaaTa22C.160.002121
ORF811T11KaCaaAa22C.360.001821
ORF811T11IaCaaTa22D.20.00015
ORF811T11KaCaaAa22D.20.00015
ORF811T11KaCaaAa22P.1.140.000096
ORF811T11delACA---22P.1.150.000465
ORF811T11TacAacG22P.1.170.000324
ORF811T11KaCaaAa22P.1.70.000639
ORF811T11MaCAaTG22P.50.027397
ORF811T11IaCaaTa22Q.30.00029
ORF811T11delACA---22R.10.00018
ORF811T11KaCaaAa11A.10.000282
ORF811T11delACA---11A.20.000662
ORF811T11TacAacG11A.2.40.003367
ORF811T11AAcaGca11A.2.40.003367
ORF811T11KaCaaAa11A.2.40.003367
ORF811T11AAcaGca11A.2.50.000499
ORF811T11KaCaaAa11A.2.50.000499
ORF811T11delACA---11A.2.50.000499
ORF811T11IaCaaTa11A.23.10.000704
ORF811T11delACA---11A.23.10.000704
ORF811T11IaCaaTa11A.300.142857
ORF811T11delACA---11AE.40.043478
ORF811T11DACAGAC11All0
ORF811T11HACACAC11All0
ORF811T11KaCaaAa11AW.10.003049
ORF811T11IaCaaTa11AY.1060.000335
ORF811T11AAcaGca11AY.1060.000335
ORF811T11delACA---11AY.1080.001103
ORF811T11KaCaaAa11AY.1130.000142
ORF811T11KaCaaAa11AY.1170.000085
ORF811T11del1Aca-ca11AY.1170.000085
ORF811T11AAcaGca11AY.1190.000035
ORF811T11IaCaaTa11AY.1190.000035
ORF811T11KaCaaAa11AY.1190.000035
ORF811T11AAcaGca11AY.160.00038
ORF811T11KaCaaAa11AY.190.00114
ORF811T11KaCaaAa11AY.230.00007
ORF811T11IaCaaTa11AY.23.10.000417
ORF811T11AAcaGca11AY.260.000028
ORF811T11AAcaGca11AY.270.000065
ORF811T11SAcaTca11AY.290.000016
ORF811T11IaCaaTa11AY.29.10.000221
ORF811T11RaCaaGa11AY.30.00001
ORF811T11KaCaaAa11AY.3.10.000085
ORF811T11IaCaaTa11AY.300.000396
ORF811T11IaCaaTa11AY.320.000532
ORF811T11AAcaGca11AY.320.000532
ORF811T11KaCaaAa11AY.330.000067
ORF811T11KaCaaAa11AY.340.000097
ORF811T11IaCaaTa11AY.350.000233
ORF811T11del2ACa--a11AY.360.000148
ORF811T11IaCaaTa11AY.380.000499
ORF811T11IaCaaTa11AY.39.10.00004
ORF811T11TacAacG11AY.39.10.00004
ORF811T11SAcaTca11AY.40.000002
ORF811T11AAcaGca11AY.4.20.000022
ORF811T11KaCaaAa11AY.4.2.10.000149
ORF811T11IaCaaTa11AY.4.2.10.000149
ORF811T11KaCaaAa11AY.4.30.000842
ORF811T11KaCaaAa11AY.400.000964
ORF811T11KaCaaAa11AY.410.000294
ORF811T11SAcATcG11AY.430.000004
ORF811T11delACA---11AY.46.40.000165
ORF811T11IaCaaTa11AY.5.30.000337
ORF811T11SAcaTca11AY.500.000799
ORF811T11KaCaaAa11AY.530.000288
ORF811T11KaCaaAa11AY.540.000095
ORF811T11delACA---11AY.550.000917
ORF811T11IaCaaTa11AY.570.000656
ORF811T11delACA---11AY.610.000105
ORF811T11KaCaaAa11AY.610.000105
ORF811T11KaCaaAa11AY.620.000436
ORF811T11IaCaaTa11AY.630.000387
ORF811T11IaCaaTa11AY.680.000274
ORF811T11IaCaaTa11AY.690.000187
ORF811T11IaCaaTa11AY.7.10.000113
ORF811T11IaCaaTa11AY.750.000056
ORF811T11KaCaaAa11AY.75.10.00018
ORF811T11KaCaaAa11AY.790.001211
ORF811T11RaCaaGa11AY.840.000437
ORF811T11IaCaaTa11AY.850.000427
ORF811T11IaCaaTa11AY.90.000068
ORF811T11delACA---11AY.90.000068
ORF811T11IaCaaTa11AY.9.20.000037
ORF811T11IaCaaTa11AY.9.2.10.001976
ORF811T11KaCaaAa11AY.920.000287
ORF811T11TacAacG11AY.930.000273
ORF811T11KaCaaAa11AY.930.000273
ORF811T11AAcaGca11AY.98.10.000048
ORF811T11IaCaaTa11AY.990.001049
ORF811T11delACA---11AY.99.10.001553
ORF811T11KaCaaAa11AZ.10.000867
ORF811T11IaCaaTa11AZ.50.003509
ORF811T11PAcACcC11B.10.000009
ORF811T11DACAGAC11B.10.000009
ORF811T11HACACAC11B.10.000009
ORF811T11del1Aca-ca11B.10.000009
ORF811T11RaCaaGa11B.1.10.000018
ORF811T11del1aCaa-a11B.1.10.000018
ORF811T11KaCaaAa11B.1.1.1350.004695
ORF811T11IaCaaTa11B.1.1.1530.001095
ORF811T11IaCaaTa11B.1.1.1610.003534
ORF811T11KaCaaAa11B.1.1.1630.007634
ORF811T11delACA---11B.1.1.1740.003378
ORF811T11IaCaaTa11B.1.1.1980.001468
ORF811T11AAcaGca11B.1.1.2160.00089
ORF811T11IaCaaTa11B.1.1.2160.00089
ORF811T11delACA---11B.1.1.2160.00089
ORF811T11KaCaaAa11B.1.1.2220.000204
ORF811T11SAcaTca11B.1.1.2310.003096
ORF811T11KaCaaAa11B.1.1.2310.003096
ORF811T11KaCaaAa11B.1.1.2360.006897
ORF811T11delACA---11B.1.1.250.000569
ORF811T11IaCaaTa11B.1.1.250.000569
ORF811T11IaCaaTa11B.1.1.2570.009709
ORF811T11IaCaaTa11B.1.1.2690.001353
ORF811T11AAcaGca11B.1.1.280.000311
ORF811T11delACA---11B.1.1.2840.000107
ORF811T11KaCaaAa11B.1.1.2970.002237
ORF811T11IaCaaTa11B.1.1.3010.001179
ORF811T11IaCaaTa11B.1.1.3060.000438
ORF811T11delACA---11B.1.1.3180.000302
ORF811T11del1acAac-11B.1.1.3180.000302
ORF811T11KaCaaAa11B.1.1.3370.003597
ORF811T11SAcaTca11B.1.1.3540.004386
ORF811T11delACA---11B.1.1.3540.004386
ORF811T11IaCaaTa11B.1.1.3620.005618
ORF811T11IaCaaTa11B.1.1.370.000193
ORF811T11TacAacT11B.1.1.3710.010417
ORF811T11IaCaaTa11B.1.1.3720.000689
ORF811T11TacAacG11B.1.1.3960.045455
ORF811T11IaCaaTa11B.1.1.4070.041667
ORF811T11KaCaaAa11B.1.1.4340.000349
ORF811T11IaCaaTa11B.1.1.4480.002033
ORF811T11AAcaGca11B.1.1.4850.016667
ORF811T11delACA---11B.1.1.500.000679
ORF811T11IaCaaTa11B.1.1.5240.020833
ORF811T11KaCaaAa11B.1.1.5260.003546
ORF811T11IaCaaTa11B.1.1.5280.004808
ORF811T11IaCaaTa11B.1.1.700.000341
ORF811T11delACA---11B.1.1.700.000341
ORF811T11AAcaGca11B.1.1.750.010638
ORF811T11KaCaaAa11B.1.110.30.000718
ORF811T11IaCaaTa11B.1.1110.001175
ORF811T11IaCaaTa11B.1.1260.001276
ORF811T11TacAacG11B.1.1260.001276
ORF811T11IaCaaTa11B.1.160.320.004292
ORF811T11IaCaaTa11B.1.1700.00431
ORF811T11KaCaaAa11B.1.1700.00431
ORF811T11PAcaCca11B.1.1770.000013
ORF811T11TacAacG11B.1.1770.000013
ORF811T11IaCaaTa11B.1.177.150.000631
ORF811T11IaCaaTa11B.1.177.230.003236
ORF811T11IaCaaTa11B.1.177.240.001295
ORF811T11KaCaaAa11B.1.177.540.000606
ORF811T11del1Aca-ca11B.1.177.60.000977
ORF811T11IaCaaTa11B.1.177.60.000977
ORF811T11TacAacC11B.1.177.630.002703
ORF811T11delACA---11B.1.177.70.000165
ORF811T11TacAacG11B.1.177.70.000165
ORF811T11IaCaaTa11B.1.177.760.002494
ORF811T11IaCaaTa11B.1.177.810.000189
ORF811T11delACA---11B.1.177.830.001481
ORF811T11KaCaaAa11B.1.177.860.000183
ORF811T11IaCaaTa11B.1.177.860.000183
ORF811T11IaCaaTa11B.1.1900.01
ORF811T11delACA---11B.1.1950.005025
ORF811T11SAcaTca11B.1.20.000009
ORF811T11KaCaaAa11B.1.2210.000071
ORF811T11SAcaTca11B.1.2320.000537
ORF811T11IaCaaTa11B.1.2370.004975
ORF811T11KaCaaAa11B.1.2400.000216
ORF811T11IaCaaTa11B.1.2400.000216
ORF811T11IaCaaTa11B.1.243.10.022222
ORF811T11delACA---11B.1.2580.000067
ORF811T11AAcaGca11B.1.2580.000067
ORF811T11delACA---11B.1.258.120.007874
ORF811T11delACA---11B.1.258.170.000104
ORF811T11KaCaaAa11B.1.258.170.000104
ORF811T11IaCaaTa11B.1.2650.001271
ORF811T11IaCaaTa11B.1.2800.007143
ORF811T11IaCaaTa11B.1.2810.021739
ORF811T11delACA---11B.1.3240.001605
ORF811T11IaCaaTa11B.1.3380.008621
ORF811T11IaCaaTa11B.1.3500.002933
ORF811T11SAcaTca11B.1.3510.00003
ORF811T11AAcaGca11B.1.351.20.000303
ORF811T11IaCaaTa11B.1.351.20.000303
ORF811T11delACA---11B.1.351.20.000303
ORF811T11KaCaaAa11B.1.351.50.0006
ORF811T11XACaTAa11B.1.360.000146
ORF811T11del1Aca-ca11B.1.36.10.00114
ORF811T11IaCaaTa11B.1.36.160.001425
ORF811T11delACA---11B.1.36.290.000517
ORF811T11IaCaaTa11B.1.36.70.004
ORF811T11KaCaaAa11B.1.3670.000792
ORF811T11IaCaaTa11B.1.3670.000792
ORF811T11IaCaaTa11B.1.3690.000285
ORF811T11IaCaaTa11B.1.3750.00082
ORF811T11KaCaaAa11B.1.3960.000706
ORF811T11KaCaaAa11B.1.3990.001934
ORF811T11KaCaaAa11B.1.4050.012346
ORF811T11IaCaaTa11B.1.4110.003704
ORF811T11KaCaaAa11B.1.4250.002994
ORF811T11KaCaaAa11B.1.4280.00102
ORF811T11IaCaaTa11B.1.438.10.000107
ORF811T11IaCaaTa11B.1.4590.004082
ORF811T11AAcaGca11B.1.466.20.000391
ORF811T11IaCaaTa11B.1.466.20.000391
ORF811T11delACA---11B.1.4680.005714
ORF811T11IaCaaTa11B.1.499.10.111111
ORF811T11delACA---11B.1.5060.02381
ORF811T11IaCaaTa11B.1.5090.000866
ORF811T11IaCaaTa11B.1.5240.001406
ORF811T11KaCaaAa11B.1.5250.000113
ORF811T11IaCaaTa11B.1.5250.000113
ORF811T11IaCaaTa11B.1.5330.009615
ORF811T11IaCaaTa11B.1.5370.02
ORF811T11IaCaaTa11B.1.5640.000426
ORF811T11KaCaaAa11B.1.5640.000426
ORF811T11IaCaaTa11B.1.5680.001111
ORF811T11IaCaaTa11B.1.5740.002151
ORF811T11KaCaaAa11B.1.5750.000303
ORF811T11AAcaGca11B.1.575.10.002439
ORF811T11KaCaaAa11B.1.575.10.002439
ORF811T11delACA---11B.1.5820.000491
ORF811T11IaCaaTa11B.1.5950.000261
ORF811T11KaCaaAa11B.1.5950.000261
ORF811T11AAcaGca11B.1.5960.000087
ORF811T11KaCaaAa11B.1.5960.000087
ORF811T11delACA---11B.1.6090.000479
ORF811T11XACaTAa11B.1.6090.000479
ORF811T11KaCaaAa11B.1.6090.000479
ORF811T11delACA---11B.1.617.10.000129
ORF811T11RaCaaGa11B.1.617.20.000004
ORF811T11KaCaaAa11B.1.6190.000871
ORF811T11IaCaaTa11B.1.6190.000871
ORF811T11KaCaaAa11B.1.6300.005236
ORF811T11delACA---11B.1.6300.005236
ORF811T11KaCaaAa11B.1.6330.041667
ORF811T11KaCaaAa11B.1.6380.052632
ORF811T11IaCaaTa11B.1.6380.052632
ORF811T11IaCaaTa11B.1.6390.021739
ORF811T11IaCaaTa11B.270.015385
ORF811T11KaCaaAa11B.290.003509
ORF811T11KaCaaAa11B.3.10.001658
ORF811T11IaCaaTa11B.40.002208
ORF811T11IaCaaTa11B.4.50.011905
ORF811T11KaCaaAa11B.550.00295
ORF811T11KaCaaAa11B.610.005747
ORF811T11IaCaaTa11C.10.002392
ORF811T11IaCaaTa11C.1.20.004255
ORF811T11IaCaaTa11C.140.004329
ORF811T11delACA---11C.260.007353
ORF811T11KaCaaAa11C.370.000116
ORF811T11delACA---11N.30.005814
ORF811T11IaCaaTa11N.50.001767
ORF811T11delACA---11N.60.007092
ORF811T11TacAacG11P.10.000016
ORF811T11AAcaGca11P.1.10.000318
ORF811T11IaCaaTa11P.1.10.10.00813
ORF811T11delACA---11P.1.120.000484
ORF811T11KaCaaAa11P.1.120.000484
ORF811T11IaCaaTa11P.1.130.000898
ORF811T11KaCaaAa11P.1.160.000374
ORF811T11delACA---11P.1.170.000162
ORF811T11IaCaaTa11P.20.000187
ORF811T11IaCaaTa11Q.10.000126
ORF811T11delACA---11Q.20.000613
ORF811T11KaCaaAa11Q.30.000145
ORF811T11KaCaaAa11Q.80.000165
ORF811T11del1Aca-ca11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.