CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 103

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF8103S103SsyntcGtcA334030400.9101828200-28202
ORF8103S103SsyntcGtcT33402930.087724628200-28202
ORF8103S103SsyntcGtcC334070.0020958128200-28202
ORF8103S103LnonsyntCgtTg199819940.99799828200-28202
ORF8103S103LnonsyntCGtTA199820.00100128200-28202
ORF8103S103LnonsynTCGCTA199810.000500528200-28202
ORF8103S103LnonsynTCgCTg199810.000500528200-28202
ORF8103S103deldelTCG---495495128200-28202
ORF8103S103XnonsyntCgtAg3383360.99408328200-28202
ORF8103S103XnonsyntCGtGA33820.0059171628200-28202
ORF8103S103PnonsynTcgCcg1731720.9942228200-28202
ORF8103S103PnonsynTcGCcA17310.0057803528200-28202
ORF8103S103AnonsynTcgGcg3939128200-28202
ORF8103S103WnonsyntCgtGg2828128200-28202
ORF8103S103TnonsynTcgAcg2828128200-28202
ORF8103S103del1deltCgt-g740.57142928200-28202
ORF8103S103del1deltcGtc-720.28571428200-28202
ORF8103S103del1deltCGt-N710.14285728200-28202
ORF8103S103del2delTCg--g310.33333328200-28202
ORF8103S103del2delTCGC--310.33333328200-28202
ORF8103S103del2deltCGt--310.33333328200-28202
ORF8103S103EnonsynTCGGAA11128200-28202
ORF8103S103MnonsynTCgATg11128200-28202

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF8103S103StcGtcA30403340All0.000581
ORF8103S103StcGtcT2933340All0.000056
ORF8103S103StcGtcC73340All0.000001
ORF8103S103LtCgtTg19941998All0.000381
ORF8103S103LtCGtTA21998All0
ORF8103S103LTCgCTg11998All0
ORF8103S103LTCGCTA11998All0
ORF8103S103StcGtcA18961897AY.540.180778
ORF8103S103StcGtcT11897AY.540.000095
ORF8103S103LtCgtTg617618B.1.1.70.000552
ORF8103S103LtCGtTA1618B.1.1.70.000001
ORF8103S103delTCG---495495All0.000095
ORF8103S103XtCgtAg336338All0.000064
ORF8103S103XtCGtGA2338All0
ORF8103S103StcGtcA297336B.1.617.20.001118
ORF8103S103StcGtcT39336B.1.617.20.000147
ORF8103S103LtCgtTg230230AY.40.000358
ORF8103S103PTcgCcg172173All0.000033
ORF8103S103PTcGCcA1173All0
ORF8103S103XtCgtAg151151AY.30.001502
ORF8103S103StcGtcA133135B.1.10.002413
ORF8103S103StcGtcT2135B.1.10.000036
ORF8103S103StcGtcA109119AY.40.00017
ORF8103S103StcGtcT10119AY.40.000016
ORF8103S103delTCG---102102B.1.1.70.000091
ORF8103S103XtCgtAg9393AY.920.026716
ORF8103S103StcGtcA8586AY.30.000845
ORF8103S103StcGtcC186AY.30.00001
ORF8103S103LtCgtTg8585AY.440.000517
ORF8103S103LtCgtTg7575B.1.2580.004991
ORF8103S103LtCgtTg7373B.1.617.20.000275
ORF8103S103LtCgtTg7272AY.90.004867
ORF8103S103delTCG---5959AY.40.000092
ORF8103S103StcGtcT3459B.1.20.000299
ORF8103S103StcGtcA2459B.1.20.000211
ORF8103S103StcGtcC159B.1.20.000009
ORF8103S103LtCgtTg5656B.1.3510.001665
ORF8103S103LtCgtTg5555B.1.1770.000724
ORF8103S103LtCgtTg5252AY.250.000313
ORF8103S103LtCgtTg4949AY.430.000217
ORF8103S103PTcgCcg4848AY.40.000075
ORF8103S103LtCgtTg4343AY.30.000428
ORF8103S103StcGtcA3143B.1.1.70.000028
ORF8103S103StcGtcT1243B.1.1.70.000011
ORF8103S103StcGtcA4141B.1.1780.97619
ORF8103S103StcGtcA3740AY.1080.040794
ORF8103S103StcGtcT340AY.1080.003308
ORF8103S103ATcgGcg3939All0.000007
ORF8103S103StcGtcA2338AY.1030.000143
ORF8103S103StcGtcT1438AY.1030.000087
ORF8103S103StcGtcC138AY.1030.000006
ORF8103S103delTCG---3838AY.290.000599
ORF8103S103StcGtcA3636AY.260.001019
ORF8103S103LtCgtTg3636B.10.00033
ORF8103S103StcGtcA2833B.10.000256
ORF8103S103StcGtcT533B.10.000046
ORF8103S103delTCG---3333B.1.1.2220.006732
ORF8103S103delTCG---3333B.1.2430.002296
ORF8103S103delTCG---3131B.1.1600.000967
ORF8103S103LtCgtTg3030AY.1190.001059
ORF8103S103PTcgCcg3030AY.30.000298
ORF8103S103XtCgtAg3030AY.40.000047
ORF8103S103StcGtcA2529AY.440.000152
ORF8103S103StcGtcT429AY.440.000024
ORF8103S103WtCgtGg2828All0.000005
ORF8103S103TTcgAcg2828All0.000005
ORF8103S103StcGtcA2126AY.250.000126
ORF8103S103StcGtcT526AY.250.00003
ORF8103S103LtCgtTg2626B.1.1.4200.026157
ORF8103S103XtCgtAg2626B.1.1.70.000023
ORF8103S103LtCgtTg2525B.1.20.00022
ORF8103S103delTCG---2424B.1.10.000435
ORF8103S103LtCgtTg2222AY.750.001232
ORF8103S103StcGtcA1820AY.50.000372
ORF8103S103StcGtcC120AY.50.000021
ORF8103S103StcGtcT120AY.50.000021
ORF8103S103LtCgtTg1819B.1.1600.000561
ORF8103S103LTCgCTg119B.1.1600.000031
ORF8103S103LtCgtTg1919P.10.000299
ORF8103S103TTcgAcg1818AY.430.00008
ORF8103S103delTCG---1818B0.002301
ORF8103S103LtCgtTg1818B.1.258.170.001871
ORF8103S103LtCgtTg1717AY.1180.001065
ORF8103S103LtCgtTg1717B.1.6370.001242
ORF8103S103LtCgtTg1616AY.1090.011834
ORF8103S103ATcgGcg1616B.1.1.70.000014
ORF8103S103delTCG---1515AY.250.00009
ORF8103S103LtCgtTg1515AY.670.006964
ORF8103S103PTcgCcg1515B.1.1.4610.180723
ORF8103S103StcGtcA1515B.1.5260.000353
ORF8103S103StcGtcT1014P.10.000158
ORF8103S103StcGtcA414P.10.000063
ORF8103S103StcGtcA613AY.1020.000159
ORF8103S103StcGtcT513AY.1020.000133
ORF8103S103StcGtcC213AY.1020.000053
ORF8103S103StcGtcT1313B.1.177.540.007884
ORF8103S103StcGtcA1213C.370.001393
ORF8103S103StcGtcT113C.370.000116
ORF8103S103LtCgtTg1112B.1.10.0002
ORF8103S103LTCGCTA112B.1.10.000018
ORF8103S103PTcgCcg1212B.1.1.70.000011
ORF8103S103LtCgtTg1212R.10.00108
ORF8103S103LtCgtTg1111AY.1030.000068
ORF8103S103StcGtcA1111AY.1190.000388
ORF8103S103LtCgtTg1111AY.540.001049
ORF8103S103StcGtcA1111AY.610.001153
ORF8103S103LtCgtTg1111B.1.2210.000781
ORF8103S103PTcgCcg1010AY.1030.000062
ORF8103S103LtCgtTg1010AY.420.000402
ORF8103S103LtCgtTg1010AY.530.002875
ORF8103S103StcGtcT1010AY.690.001867
ORF8103S103StcGtcA1010AY.7.10.001127
ORF8103S103LtCgtTg1010B.1.4290.000235
ORF8103S103delTCG---1010P.10.000158
ORF8103S103StcGtcT99AY.1130.001282
ORF8103S103delTCG---99AY.430.00004
ORF8103S103StcGtcT99B.1.1.2140.000499
ORF8103S103StcGtcT99C.350.006966
ORF8103S103WtCgtGg99P.10.000142
ORF8103S103LtCgtTg88AY.290.000126
ORF8103S103StcGtcT78B.1.1600.000218
ORF8103S103StcGtcA18B.1.1600.000031
ORF8103S103LtCgtTg88B.1.2190.075472
ORF8103S103del1tCgt-g47All0.000001
ORF8103S103del1tcGtc-27All0
ORF8103S103del1tCGt-N17All0
ORF8103S103LtCgtTg77AY.1000.000322
ORF8103S103StcGtcT57AY.1000.00023
ORF8103S103StcGtcA27AY.1000.000092
ORF8103S103LtCgtTg77AY.1020.000186
ORF8103S103LtCgtTg77AY.260.000198
ORF8103S103StcGtcA67AY.390.000148
ORF8103S103StcGtcT17AY.390.000025
ORF8103S103LtCgtTg77AY.98.10.000339
ORF8103S103StcGtcT67B.1.1.2160.005343
ORF8103S103StcGtcA17B.1.1.2160.00089
ORF8103S103delTCG---77B.1.1.2840.000752
ORF8103S103PTcgCcg77B.1.20.000062
ORF8103S103delTCG---77B.1.36.160.009972
ORF8103S103StcGtcA77B.1.4350.079545
ORF8103S103StcGtcT77B.1.617.10.000903
ORF8103S103delTCG---77B.1.617.20.000026
ORF8103S103StcGtcA66AY.23.10.002504
ORF8103S103WtCgtGg66AY.40.000009
ORF8103S103LtCgtTg66AY.60.000247
ORF8103S103LtCgtTg66AY.790.007264
ORF8103S103XtCgtAg66B.10.000055
ORF8103S103delTCG---66B.1.1.2650.018927
ORF8103S103TTcgAcg66B.1.1.70.000005
ORF8103S103StcGtcA66B.1.1770.000079
ORF8103S103ATcgGcg66B.1.3510.000178
ORF8103S103StcGtcT66B.1.5950.001566
ORF8103S103PTcgCcg66B.1.617.20.000023
ORF8103S103delTCG---66P.1.140.000287
ORF8103S103WtCgtGg55AY.1200.000186
ORF8103S103LtCgtTg55AY.230.000349
ORF8103S103PTcgCcg55AY.250.00003
ORF8103S103XtCgtAg55AY.250.00003
ORF8103S103delTCG---55AY.29.10.001103
ORF8103S103LtCgtTg55AY.360.000741
ORF8103S103StcGtcT35AY.430.000013
ORF8103S103StcGtcA25AY.430.000009
ORF8103S103StcGtcA55AY.460.00052
ORF8103S103LtCgtTg55AY.780.007704
ORF8103S103LtCgtTg55AY.920.001436
ORF8103S103LtCgtTg55B.1.1.2050.018587
ORF8103S103LtCgtTg55B.1.1.4340.001743
ORF8103S103LtCgtTg55B.1.1.5190.000199
ORF8103S103LtCgtTg55B.1.1570.014925
ORF8103S103StcGtcT55B.1.2210.000355
ORF8103S103StcGtcA45B.1.2340.000528
ORF8103S103StcGtcT15B.1.2340.000132
ORF8103S103LtCgtTg55B.1.360.00073
ORF8103S103LtCgtTg55B.1.3610.006443
ORF8103S103StcGtcT55B.40.011038
ORF8103S103LtCgtTg55P.1.140.000239
ORF8103S103StcGtcT55R.10.00045
ORF8103S103PTcgCcg44AY.1050.002572
ORF8103S103StcGtcT34AY.1160.00086
ORF8103S103StcGtcA14AY.1160.000287
ORF8103S103StcGtcT24AY.330.000134
ORF8103S103StcGtcA24AY.330.000134
ORF8103S103LtCgtTg44AY.39.10.000158
ORF8103S103StcGtcA44AY.480.00186
ORF8103S103LtCgtTg44AY.50.000083
ORF8103S103StcGtcA44AY.98.10.000194
ORF8103S103PTcgCcg44B.1.1.250.002274
ORF8103S103StcGtcA44B.1.1.2770.003035
ORF8103S103StcGtcA44B.1.1.3760.02381
ORF8103S103delTCG---44B.1.1.5190.000159
ORF8103S103LtCgtTg44B.1.2430.000278
ORF8103S103StcGtcA24B.1.2430.000139
ORF8103S103StcGtcT24B.1.2430.000139
ORF8103S103delTCG---44B.1.3200.004981
ORF8103S103LtCgtTg44B.1.3690.001141
ORF8103S103LtCgtTg44B.1.3750.003279
ORF8103S103StcGtcA44B.1.3970.019417
ORF8103S103StcGtcA34B.1.4290.000071
ORF8103S103StcGtcT14B.1.4290.000024
ORF8103S103LtCgtTg44B.1.5960.000349
ORF8103S103XtCgtAg44B.1.617.20.000015
ORF8103S103StcGtcA44B.1.9.50.022727
ORF8103S103LtCgtTg44N.60.028369
ORF8103S103delTCG---44P.1.10.001271
ORF8103S103StcGtcA44P.20.000747
ORF8103S103StcGtcA23A.23.10.001408
ORF8103S103StcGtcT13A.23.10.000704
ORF8103S103del2TCg--g13All0
ORF8103S103del2TCGC--13All0
ORF8103S103del2tCGt--13All0
ORF8103S103StcGtcA33AY.100.00159
ORF8103S103delTCG---33AY.1020.00008
ORF8103S103LtCgtTg33AY.1050.001929
ORF8103S103LtCgtTg33AY.1100.000338
ORF8103S103WtCgtGg33AY.1140.000693
ORF8103S103StcGtcA33AY.1180.000188
ORF8103S103StcGtcT23AY.1200.000074
ORF8103S103StcGtcA13AY.1200.000037
ORF8103S103LtCgtTg33AY.1210.000406
ORF8103S103StcGtcA33AY.200.000117
ORF8103S103delTCG---33AY.30.00003
ORF8103S103LtCgtTg33AY.330.0002
ORF8103S103LtCgtTg33AY.4.20.000065
ORF8103S103delTCG---33AY.440.000018
ORF8103S103StcGtcT33AY.46.30.002801
ORF8103S103StcGtcA33AY.980.000237
ORF8103S103StcGtcA33B0.000383
ORF8103S103PTcgCcg33B.1.1.2800.009259
ORF8103S103LtCgtTg33B.1.1.330.001263
ORF8103S103ATcgGcg33B.1.1.3320.09375
ORF8103S103delTCG---33B.1.20.000026
ORF8103S103delTCG---33B.1.220.003953
ORF8103S103LtCgtTg33B.1.3430.0625
ORF8103S103LtCgtTg33B.1.351.20.000908
ORF8103S103StcGtcA33B.1.36.170.001482
ORF8103S103StcGtcA33B.1.36.290.001552
ORF8103S103StcGtcA33B.1.4090.002344
ORF8103S103delTCG---33B.1.5090.002597
ORF8103S103LtCgtTg33B.1.5250.000339
ORF8103S103LtCgtTg33B.1.5260.000071
ORF8103S103PTcgCcg33P.10.000047
ORF8103S103StcGtcT33P.1.140.000143
ORF8103S103TTcgAcg220.111111
ORF8103S103XtCgtAg22AY.1000.000092
ORF8103S103XtCGtGA12AY.1030.000006
ORF8103S103XtCgtAg12AY.1030.000006
ORF8103S103StcGtcA22AY.1170.000169
ORF8103S103LtCgtTg22AY.120.000632
ORF8103S103delTCG---22AY.1200.000074
ORF8103S103LtCgtTg22AY.130.000322
ORF8103S103StcGtcT22AY.130.000322
ORF8103S103StcGtcA22AY.160.000759
ORF8103S103LtCgtTg22AY.200.000078
ORF8103S103StcGtcA12AY.230.00007
ORF8103S103StcGtcT12AY.230.00007
ORF8103S103delTCG---22AY.260.000057
ORF8103S103PTcgCcg22AY.260.000057
ORF8103S103StcGtcT12AY.270.000065
ORF8103S103StcGtcA12AY.270.000065
ORF8103S103StcGtcA12AY.290.000016
ORF8103S103StcGtcT12AY.290.000016
ORF8103S103LtCgtTg22AY.3.10.000171
ORF8103S103StcGtcA22AY.320.001065
ORF8103S103PTcgCcg22AY.330.000134
ORF8103S103LtCgtTg22AY.340.000194
ORF8103S103StcGtcA22AY.360.000296
ORF8103S103delTCG---22AY.390.000049
ORF8103S103StcGtcA12AY.4.20.000022
ORF8103S103StcGtcT12AY.4.20.000022
ORF8103S103PTcgCcg22AY.430.000009
ORF8103S103XtCgtAg22AY.430.000009
ORF8103S103PTcgCcg22AY.440.000012
ORF8103S103LtCgtTg22AY.460.000208
ORF8103S103PTcgCcg22AY.46.60.000144
ORF8103S103LtCgtTg22AY.470.000062
ORF8103S103delTCG---22AY.480.00093
ORF8103S103LtCgtTg22AY.9.10.000167
ORF8103S103StcGtcA22AY.9.20.000073
ORF8103S103StcGtcT22AY.990.002099
ORF8103S103delTCG---22B.10.000018
ORF8103S103PTcgCcg22B.10.000018
ORF8103S103ATcgGcg22B.1.10.000036
ORF8103S103StcGtcA22B.1.1.1610.007067
ORF8103S103delTCG---22B.1.1.2140.000111
ORF8103S103StcGtcA22B.1.1.2220.000408
ORF8103S103LtCgtTg22B.1.1.280.000622
ORF8103S103LtCgtTg22B.1.1.3060.000877
ORF8103S103del2tCGt--12B.1.1.70.000001
ORF8103S103del1tcGtc-12B.1.1.70.000001
ORF8103S103del2TCGC--12B.1.1.70.000001
ORF8103S103del1tCGt-N12B.1.1.70.000001
ORF8103S103delTCG---22B.1.1770.000026
ORF8103S103StcGtcT22B.1.177.100.001756
ORF8103S103ATcgGcg22B.1.177.320.002699
ORF8103S103StcGtcA12B.1.177.70.000165
ORF8103S103StcGtcT12B.1.177.70.000165
ORF8103S103delTCG---22B.1.3510.000059
ORF8103S103delTCG---22B.1.360.000292
ORF8103S103StcGtcT12B.1.3690.000285
ORF8103S103StcGtcC12B.1.3690.000285
ORF8103S103LtCgtTg22B.1.4530.006472
ORF8103S103XtCgtAg22B.1.5260.000047
ORF8103S103LtCgtTg22B.1.5750.000607
ORF8103S103StcGtcA22B.1.5960.000174
ORF8103S103StcGtcT12B.1.6090.000479
ORF8103S103StcGtcA12B.1.6090.000479
ORF8103S103LtCgtTg22B.1.617.10.000258
ORF8103S103StcGtcA22B.1.6210.000177
ORF8103S103PTcgCcg22B.1.6230.001073
ORF8103S103StcGtcT12B.1.6280.000352
ORF8103S103StcGtcA12B.1.6280.000352
ORF8103S103delTCG---22B.1.6370.000146
ORF8103S103StcGtcA22D.20.00015
ORF8103S103LtCgtTg22Q.80.00033
ORF8103S103XtCgtAg11A0.000387
ORF8103S103LtCgtTg11AD.20.000219
ORF8103S103ETCGGAA11All0
ORF8103S103MTCgATg11All0
ORF8103S103ATcgGcg11AY.1000.000046
ORF8103S103StcGtcA11AY.1010.00049
ORF8103S103LtCgtTg11AY.1010.00049
ORF8103S103XtCgtAg11AY.1020.000027
ORF8103S103delTCG---11AY.1080.001103
ORF8103S103StcGtcA11AY.1100.000113
ORF8103S103LtCgtTg11AY.1160.000287
ORF8103S103delTCG---11AY.116.10.000311
ORF8103S103XtCgtAg11AY.1170.000085
ORF8103S103delTCG---11AY.1180.000063
ORF8103S103XtCgtAg11AY.1200.000037
ORF8103S103LtCgtTg11AY.120.10.000321
ORF8103S103ATcgGcg11AY.1210.000135
ORF8103S103WtCgtGg11AY.1210.000135
ORF8103S103StcGtcT11AY.1210.000135
ORF8103S103StcGtcT11AY.16.10.00047
ORF8103S103LtCgtTg11AY.16.10.00047
ORF8103S103delTCG---11AY.190.00114
ORF8103S103LtCgtTg11AY.210.001898
ORF8103S103LtCgtTg11AY.270.000065
ORF8103S103StcGtcT11AY.280.00189
ORF8103S103XtCgtAg11AY.290.000016
ORF8103S103StcGtcA11AY.29.10.000221
ORF8103S103StcGtcA11AY.300.000396
ORF8103S103StcGtcA11AY.310.018519
ORF8103S103WtCgtGg11AY.330.000067
ORF8103S103StcGtcA11AY.340.000097
ORF8103S103LtCgtTg11AY.390.000025
ORF8103S103delTCG---11AY.4.20.000022
ORF8103S103LtCgtTg11AY.4.2.10.000149
ORF8103S103LtCgtTg11AY.4.40.000409
ORF8103S103LtCgtTg11AY.4.50.000107
ORF8103S103StcGtcA11AY.400.000964
ORF8103S103StcGtcA11AY.420.00004
ORF8103S103ATcgGcg11AY.430.000004
ORF8103S103del2TCg--g11AY.430.000004
ORF8103S103WtCgtGg11AY.430.000004
ORF8103S103StcGtcA11AY.450.000122
ORF8103S103XtCgtAg11AY.460.000104
ORF8103S103LtCgtTg11AY.46.10.001027
ORF8103S103XtCgtAg11AY.46.20.000635
ORF8103S103StcGtcA11AY.46.40.000165
ORF8103S103StcGtcA11AY.46.60.000072
ORF8103S103LtCgtTg11AY.46.60.000072
ORF8103S103XtCgtAg11AY.470.000031
ORF8103S103del1tCgt-g11AY.480.000465
ORF8103S103XtCgtAg11AY.50.000021
ORF8103S103LtCgtTg11AY.5.30.000337
ORF8103S103del1tcGtc-11AY.5.30.000337
ORF8103S103XtCgtAg11AY.520.000814
ORF8103S103delTCG---11AY.580.000907
ORF8103S103StcGtcA11AY.60.000041
ORF8103S103StcGtcA11AY.620.000436
ORF8103S103StcGtcA11AY.650.000533
ORF8103S103LtCgtTg11AY.680.000274
ORF8103S103StcGtcA11AY.730.000665
ORF8103S103LtCgtTg11AY.740.000116
ORF8103S103StcGtcA11AY.750.000056
ORF8103S103StcGtcA11AY.75.10.00018
ORF8103S103LtCgtTg11AY.75.10.00018
ORF8103S103StcGtcA11AY.80.000606
ORF8103S103LtCgtTg11AY.840.000437
ORF8103S103StcGtcA11AY.850.000427
ORF8103S103LtCgtTg11AY.850.000427
ORF8103S103XtCgtAg11AY.870.000833
ORF8103S103StcGtcT11AY.90.000068
ORF8103S103LtCgtTg11AY.9.20.000037
ORF8103S103delTCG---11AY.910.00073
ORF8103S103StcGtcA11AY.910.00073
ORF8103S103PTcgCcg11AY.980.000079
ORF8103S103LtCgtTg11AY.980.000079
ORF8103S103StcGtcA11AY.99.10.001553
ORF8103S103StcGtcA11AY.99.20.000092
ORF8103S103XtCgtAg11B0.000128
ORF8103S103del1tCgt-g11B.10.000009
ORF8103S103ETCGGAA11B.1.10.000018
ORF8103S103delTCG---11B.1.1.1740.003378
ORF8103S103TTcgAcg11B.1.1.2100.005714
ORF8103S103LtCgtTg11B.1.1.2140.000055
ORF8103S103delTCG---11B.1.1.2160.00089
ORF8103S103StcGtcA11B.1.1.2200.001859
ORF8103S103LtCgtTg11B.1.1.2840.000107
ORF8103S103LtCgtTg11B.1.1.3110.000358
ORF8103S103LtCgtTg11B.1.1.3170.000412
ORF8103S103StcGtcT11B.1.1.330.000421
ORF8103S103delTCG---11B.1.1.3540.004386
ORF8103S103delTCG---11B.1.1.3690.000446
ORF8103S103ATcgGcg11B.1.1.370.000193
ORF8103S103delTCG---11B.1.1.370.000193
ORF8103S103StcGtcA11B.1.1.3720.000689
ORF8103S103TTcgAcg11B.1.1.390.00051
ORF8103S103XtCGtGA11B.1.1.3960.045455
ORF8103S103StcGtcA11B.1.1.4090.002833
ORF8103S103StcGtcA11B.1.1.5180.006329
ORF8103S103StcGtcT11B.1.1.5190.00004
ORF8103S103PTcgCcg11B.1.1.5260.003546
ORF8103S103LtCgtTg11B.1.1110.001175
ORF8103S103delTCG---11B.1.1260.001276
ORF8103S103PTcgCcg11B.1.160.90.007194
ORF8103S103PTcgCcg11B.1.1770.000013
ORF8103S103delTCG---11B.1.177.120.000152
ORF8103S103LtCgtTg11B.1.177.120.000152
ORF8103S103StcGtcT11B.1.177.330.001645
ORF8103S103delTCG---11B.1.177.480.003125
ORF8103S103MTCgATg11B.1.177.630.002703
ORF8103S103ATcgGcg11B.1.177.70.000165
ORF8103S103delTCG---11B.1.177.70.000165
ORF8103S103LtCgtTg11B.1.177.810.000189
ORF8103S103delTCG---11B.1.177.830.001481
ORF8103S103LtCGtTA11B.1.1780.02381
ORF8103S103delTCG---11B.1.1950.005025
ORF8103S103WtCgtGg11B.1.20.000009
ORF8103S103delTCG---11B.1.2100.002132
ORF8103S103LtCgtTg11B.1.2200.01087
ORF8103S103LtCgtTg11B.1.221.30.000833
ORF8103S103LtCgtTg11B.1.2340.000132
ORF8103S103LtCgtTg11B.1.2390.001221
ORF8103S103ATcgGcg11B.1.2430.00007
ORF8103S103delTCG---11B.1.2580.000067
ORF8103S103StcGtcA11B.1.2580.000067
ORF8103S103LtCgtTg11B.1.258.110.000396
ORF8103S103delTCG---11B.1.258.120.007874
ORF8103S103delTCG---11B.1.258.170.000104
ORF8103S103StcGtcA11B.1.258.20.004505
ORF8103S103PTcgCcg11B.1.3500.002933
ORF8103S103PTcgCcg11B.1.3510.00003
ORF8103S103StcGtcA11B.1.3510.00003
ORF8103S103delTCG---11B.1.351.20.000303
ORF8103S103LtCgtTg11B.1.351.30.000876
ORF8103S103StcGtcT11B.1.360.000146
ORF8103S103PTcgCcg11B.1.36.180.00042
ORF8103S103StcGtcA11B.1.36.180.00042
ORF8103S103StcGtcA11B.1.36.260.002857
ORF8103S103delTCG---11B.1.36.290.000517
ORF8103S103LtCgtTg11B.1.36.310.001751
ORF8103S103StcGtcA11B.1.36.360.000602
ORF8103S103StcGtcT11B.1.36.80.001
ORF8103S103StcGtcT11B.1.3890.001002
ORF8103S103LtCgtTg11B.1.4040.001302
ORF8103S103LtCgtTg11B.1.416.10.001563
ORF8103S103LtCgtTg11B.1.4260.001009
ORF8103S103StcGtcA11B.1.4270.00005
ORF8103S103ATcgGcg11B.1.4270.00005
ORF8103S103StcGtcT11B.1.4280.00102
ORF8103S103delTCG---11B.1.4290.000024
ORF8103S103ATcgGcg11B.1.4290.000024
ORF8103S103StcGtcA11B.1.4590.004082
ORF8103S103StcGtcT11B.1.4620.007246
ORF8103S103StcGtcT11B.1.4680.005714
ORF8103S103delTCG---11B.1.4680.005714
ORF8103S103delTCG---11B.1.5240.001406
ORF8103S103StcGtcA11B.1.5250.000113
ORF8103S103PTcgCcg11B.1.5250.000113
ORF8103S103PTcGCcA11B.1.5260.000024
ORF8103S103StcGtcA11B.1.5580.004566
ORF8103S103LtCgtTg11B.1.5680.001111
ORF8103S103PTcgCcg11B.1.5750.000303
ORF8103S103StcGtcT11B.1.5750.000303
ORF8103S103del1tCgt-g11B.1.5890.007576
ORF8103S103delTCG---11B.1.5960.000087
ORF8103S103delTCG---11B.1.5970.00463
ORF8103S103WtCgtGg11B.1.617.20.000004
ORF8103S103PTcgCcg11B.1.6210.000089
ORF8103S103LtCgtTg11B.1.6210.000089
ORF8103S103XtCgtAg11B.1.6230.000536
ORF8103S103ATcgGcg11B.1.6310.003367
ORF8103S103StcGtcT11B.1.6370.000073
ORF8103S103LtCgtTg11B.1.9.40.006135
ORF8103S103StcGtcA11B.1.910.002075
ORF8103S103delTCG---11B.400.000364
ORF8103S103delTCG---11C.260.007353
ORF8103S103LtCgtTg11C.370.000116
ORF8103S103del1tCgt-g11D.20.000075
ORF8103S103LtCgtTg11D.20.000075
ORF8103S103XtCgtAg11N.40.004255
ORF8103S103ATcgGcg11P.10.000016
ORF8103S103delTCG---11P.1.150.000232
ORF8103S103PTcgCcg11P.1.170.000162
ORF8103S103LtCgtTg11P.1.20.001156
ORF8103S103delTCG---11Q.20.000613
ORF8103S103delTCG---11Q.30.000145
ORF8103S103delTCG---11R.10.00009
ORF8103S103LtCgtTg11U.30.003861

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.