CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF8 : CodonNum = 101

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF8101R101LnonsyncGtcTt19401940128194-28196
ORF8101R101HnonsyncGtcAt990990128194-28196
ORF8101R101CnonsynCgtTgt789789128194-28196
ORF8101R101deldelCGT---539539128194-28196
ORF8101R101RsyncgTcgC4133650.88377728194-28196
ORF8101R101RsyncgTcgG413430.10411628194-28196
ORF8101R101RsyncgTcgA41350.012106528194-28196
ORF8101R101PnonsyncGtcCt6464128194-28196
ORF8101R101SnonsynCgtAgt970.77777828194-28196
ORF8101R101SnonsynCGTTCA910.11111128194-28196
ORF8101R101SnonsynCgTAgC910.11111128194-28196
ORF8101R101del2delCGt--t870.87528194-28196
ORF8101R101del2delcGTc--810.12528194-28196
ORF8101R101del1delcgTcg-630.528194-28196
ORF8101R101del1delCGT-TC610.16666728194-28196
ORF8101R101del1delCgt-gt610.16666728194-28196
ORF8101R101del1delCgT-gA610.16666728194-28196
ORF8101R101YnonsynCGtTAt22128194-28196
ORF8101R101NnonsynCGtAAt22128194-28196
ORF8101R101QnonsyncGTcAA11128194-28196
ORF8101R101GnonsynCgtGgt11128194-28196

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF8101R101LcGtcTt19401940All0.000371
ORF8101R101HcGtcAt990990All0.000189
ORF8101R101CCgtTgt789789All0.000151
ORF8101R101LcGtcTt542542B.1.1.70.000485
ORF8101R101CCgtTgt541541B.1.6370.039532
ORF8101R101delCGT---539539All0.000103
ORF8101R101RcgTcgC365413All0.00007
ORF8101R101RcgTcgG43413All0.000008
ORF8101R101RcgTcgA5413All0.000001
ORF8101R101LcGtcTt319319AY.210.605313
ORF8101R101HcGtcAt288288AY.1030.001788
ORF8101R101HcGtcAt159159B.1.1.70.000142
ORF8101R101LcGtcTt133133AY.30.001323
ORF8101R101HcGtcAt129129P.10.002032
ORF8101R101LcGtcTt119119B.1.617.20.000448
ORF8101R101RcgTcgC66101B.1.1.70.000059
ORF8101R101RcgTcgG35101B.1.1.70.000031
ORF8101R101delCGT---9898B.1.1.70.000088
ORF8101R101LcGtcTt7777AY.430.000341
ORF8101R101LcGtcTt7575AY.4.20.001627
ORF8101R101RcgTcgC6570AY.40.000101
ORF8101R101RcgTcgA570AY.40.000008
ORF8101R101PcGtcCt6464All0.000012
ORF8101R101LcGtcTt6363AY.40.000098
ORF8101R101LcGtcTt5959AY.1030.000366
ORF8101R101CCgtTgt5959B.1.1.70.000053
ORF8101R101delCGT---5757AY.40.000089
ORF8101R101HcGtcAt5656B.1.1770.000737
ORF8101R101RcgTcgC4747B.1.1.1361
ORF8101R101LcGtcTt4343AY.39.10.001703
ORF8101R101LcGtcTt4343AY.440.000262
ORF8101R101HcGtcAt4141B.1.177.620.048868
ORF8101R101delCGT---4040AY.290.000631
ORF8101R101LcGtcTt3838AY.4.2.10.005662
ORF8101R101LcGtcTt3737AY.1020.000981
ORF8101R101HcGtcAt3535AY.40.000054
ORF8101R101PcGtcCt3535AY.40.000054
ORF8101R101LcGtcTt3535AY.630.01354
ORF8101R101delCGT---3434B.1.2430.002366
ORF8101R101delCGT---3333B.1.1.2220.006732
ORF8101R101delCGT---3232B.1.1600.000998
ORF8101R101CCgtTgt3030AY.40.000047
ORF8101R101HcGtcAt3030AY.440.000183
ORF8101R101LcGtcTt2828AY.650.014925
ORF8101R101delCGT---2424B.1.10.000435
ORF8101R101RcgTcgC2424B.1.3690.006845
ORF8101R101CCgtTgt2323AY.1030.000143
ORF8101R101HcGtcAt2323B.1.10.000417
ORF8101R101LcGtcTt2222B.10.000202
ORF8101R101delCGT---1818B0.002301
ORF8101R101HcGtcAt1818B.1.5240.025316
ORF8101R101HcGtcAt1818P.1.170.002912
ORF8101R101LcGtcTt1717AY.1190.0006
ORF8101R101LcGtcTt1717AY.250.000102
ORF8101R101HcGtcAt1717B.1.20.00015
ORF8101R101HcGtcAt1717B.1.617.20.000064
ORF8101R101CCgtTgt1616AY.690.002987
ORF8101R101LcGtcTt1616P.10.000252
ORF8101R101RcgTcgC1515AY.1190.00053
ORF8101R101delCGT---1515AY.250.00009
ORF8101R101LcGtcTt1515B.1.1.5190.000596
ORF8101R101delCGT---1515B.1.1690.223881
ORF8101R101LcGtcTt1414AY.1000.000644
ORF8101R101HcGtcAt1414AY.260.000396
ORF8101R101RcgTcgC1314B.1.617.20.000049
ORF8101R101RcgTcgG114B.1.617.20.000004
ORF8101R101RcgTcgC1313AY.250.000078
ORF8101R101LcGtcTt1212AY.330.000801
ORF8101R101LcGtcTt1212B.1.3960.008469
ORF8101R101delCGT---1111B.1.20.000097
ORF8101R101LcGtcTt1010AY.390.000247
ORF8101R101CCgtTgt1010B.10.000092
ORF8101R101delCGT---1010P.10.000158
ORF8101R101SCgtAgt79All0.000001
ORF8101R101SCGTTCA19All0
ORF8101R101SCgTAgC19All0
ORF8101R101CCgtTgt99AY.250.000054
ORF8101R101delCGT---99AY.430.00004
ORF8101R101LcGtcTt99AY.60.00037
ORF8101R101CCgtTgt99P.10.000142
ORF8101R101del2CGt--t78All0.000001
ORF8101R101del2cGTc--18All0
ORF8101R101CCgtTgt88AY.440.000049
ORF8101R101HcGtcAt88B.10.000073
ORF8101R101delCGT---88B.1.1.2910.005939
ORF8101R101RcgTcgC88B.1.1.500.005431
ORF8101R101LcGtcTt88B.1.2580.000532
ORF8101R101LcGtcTt88B.1.5260.000188
ORF8101R101HcGtcAt77AY.250.000042
ORF8101R101delCGT---77B.1.1.2840.000752
ORF8101R101RcgTcgC77B.1.1.3180.002112
ORF8101R101PcGtcCt77B.1.1.70.000006
ORF8101R101LcGtcTt77B.1.20.000062
ORF8101R101delCGT---77B.1.36.160.009972
ORF8101R101delCGT---77B.1.617.20.000026
ORF8101R101del1cgTcg-36All0.000001
ORF8101R101del1CGT-TC16All0
ORF8101R101del1CgT-gA16All0
ORF8101R101del1Cgt-gt16All0
ORF8101R101RcgTcgC66AY.1020.000159
ORF8101R101LcGtcTt66AY.200.000233
ORF8101R101LcGtcTt66AY.260.00017
ORF8101R101delCGT---66B.1.1.2650.018927
ORF8101R101RcgTcgC66B.1.177.90.007989
ORF8101R101CCgtTgt66B.1.4290.000141
ORF8101R101CCgtTgt66B.1.617.20.000023
ORF8101R101HcGtcAt66B.1.6280.002114
ORF8101R101delCGT---66P.1.140.000287
ORF8101R101LcGtcTt55AY.1130.000712
ORF8101R101RcgTcgC55AY.1200.000186
ORF8101R101delCGT---55AY.29.10.001103
ORF8101R101CCgtTgt55AY.30.00005
ORF8101R101HcGtcAt55AY.390.000124
ORF8101R101RcgTcgC55AY.440.00003
ORF8101R101delCGT---55B.10.000046
ORF8101R101LcGtcTt55B.1.10.000091
ORF8101R101LcGtcTt55B.1.1600.000156
ORF8101R101del2CGt--t55B.1.177.210.000382
ORF8101R101HcGtcAt55B.1.3510.000149
ORF8101R101CCgtTgt55B.1.4270.000252
ORF8101R101HcGtcAt55B.1.6370.000365
ORF8101R101RcgTcgC44AY.1030.000025
ORF8101R101RcgTcgC44AY.1060.00134
ORF8101R101LcGtcTt44AY.290.000063
ORF8101R101HcGtcAt44AY.30.00004
ORF8101R101RcgTcgC44AY.39.10.000158
ORF8101R101LcGtcTt44AY.4.50.00043
ORF8101R101HcGtcAt44AY.430.000018
ORF8101R101PcGtcCt44AY.440.000024
ORF8101R101CCgtTgt44AY.50.000083
ORF8101R101RcgTcgC44AY.99.20.000369
ORF8101R101delCGT---44B.1.1.5190.000159
ORF8101R101PcGtcCt44B.1.1.630.001543
ORF8101R101RcgTcgC44B.1.1.890.024242
ORF8101R101HcGtcAt44B.1.1600.000125
ORF8101R101HcGtcAt44B.1.177.570.001124
ORF8101R101CCgtTgt44B.1.214.20.002398
ORF8101R101HcGtcAt44B.1.2210.000284
ORF8101R101delCGT---44B.1.3200.004981
ORF8101R101HcGtcAt44B.1.5260.000094
ORF8101R101delCGT---44P.1.10.001271
ORF8101R101delCGT---33AY.1020.00008
ORF8101R101LcGtcTt33AY.120.000948
ORF8101R101LcGtcTt33AY.1200.000112
ORF8101R101RcgTcgC33AY.140.000264
ORF8101R101LcGtcTt33AY.230.000209
ORF8101R101RcgTcgC33AY.290.000047
ORF8101R101delCGT---33AY.30.00003
ORF8101R101HcGtcAt33AY.3.10.000256
ORF8101R101CCgtTgt33AY.330.0002
ORF8101R101CCgtTgt33AY.4.20.000065
ORF8101R101CCgtTgt33AY.430.000013
ORF8101R101HcGtcAt33AY.460.000312
ORF8101R101HcGtcAt33AY.46.40.000494
ORF8101R101LcGtcTt33AY.50.000062
ORF8101R101RcgTcgC33AY.640.001786
ORF8101R101CCgtTgt33AY.750.000168
ORF8101R101LcGtcTt33AZ.30.004559
ORF8101R101RcgTcgC33B.10.000027
ORF8101R101LcGtcTt33B.1.1.2220.000612
ORF8101R101CCgtTgt33B.1.1.2840.000322
ORF8101R101LcGtcTt33B.1.1.3170.001235
ORF8101R101LcGtcTt33B.1.1.3260.005282
ORF8101R101HcGtcAt33B.1.177.40.000633
ORF8101R101PcGtcCt33B.1.20.000026
ORF8101R101delCGT---33B.1.220.003953
ORF8101R101HcGtcAt33B.1.2340.000396
ORF8101R101LcGtcTt33B.1.360.000438
ORF8101R101RcgTcgC33B.1.360.000438
ORF8101R101delCGT---33B.1.4290.000071
ORF8101R101delCGT---33B.1.5090.002597
ORF8101R101LcGtcTt33B.1.6210.000266
ORF8101R101LcGtcTt33B.1.6230.001609
ORF8101R101RcgTcgG23B.1.6280.000705
ORF8101R101RcgTcgC13B.1.6280.000352
ORF8101R101LcGtcTt33B.1.6370.000219
ORF8101R101LcGtcTt33N.40.012766
ORF8101R101HcGtcAt33P.1.150.000697
ORF8101R101LcGtcTt33P.20.00056
ORF8101R101delCGT---220.111111
ORF8101R101LcGtcTt22A.2.50.000998
ORF8101R101NCGtAAt22All0
ORF8101R101YCGtTAt22All0
ORF8101R101HcGtcAt22AY.1000.000092
ORF8101R101HcGtcAt22AY.1020.000053
ORF8101R101YCGtTAt22AY.1030.000012
ORF8101R101CCgtTgt22AY.1060.00067
ORF8101R101LcGtcTt22AY.1090.001479
ORF8101R101LcGtcTt22AY.1170.000169
ORF8101R101HcGtcAt22AY.1190.000071
ORF8101R101CCgtTgt22AY.1210.000271
ORF8101R101HcGtcAt22AY.230.000139
ORF8101R101PcGtcCt22AY.250.000012
ORF8101R101delCGT---22AY.260.000057
ORF8101R101HcGtcAt22AY.290.000032
ORF8101R101SCgTAgC12AY.30.00001
ORF8101R101SCgtAgt12AY.30.00001
ORF8101R101LcGtcTt22AY.3.10.000171
ORF8101R101LcGtcTt22AY.300.000791
ORF8101R101HcGtcAt22AY.34.10.00102
ORF8101R101RcgTcgC22AY.390.000049
ORF8101R101RcgTcgC22AY.4.20.000043
ORF8101R101LcGtcTt22AY.4.40.000818
ORF8101R101LcGtcTt22AY.420.00008
ORF8101R101delCGT---22AY.440.000012
ORF8101R101SCgtAgt22AY.440.000012
ORF8101R101LcGtcTt22AY.450.000243
ORF8101R101HcGtcAt22AY.46.10.002053
ORF8101R101HcGtcAt22AY.46.20.001271
ORF8101R101LcGtcTt22AY.46.50.000397
ORF8101R101LcGtcTt22AY.46.60.000144
ORF8101R101CCgtTgt22AY.470.000062
ORF8101R101HcGtcAt22AY.470.000062
ORF8101R101delCGT---22AY.480.00093
ORF8101R101HcGtcAt22AY.480.00093
ORF8101R101RcgTcgC22AY.540.000191
ORF8101R101HcGtcAt22AY.750.000112
ORF8101R101LcGtcTt22AY.750.000112
ORF8101R101LcGtcTt22AY.90.000135
ORF8101R101LcGtcTt22AY.9.10.000167
ORF8101R101CCgtTgt22AY.9.20.000073
ORF8101R101LcGtcTt22AY.9.20.000073
ORF8101R101LcGtcTt22AY.920.000575
ORF8101R101HcGtcAt22AY.98.10.000097
ORF8101R101HcGtcAt22AY.99.20.000184
ORF8101R101SCgtAgt22B.10.000018
ORF8101R101PcGtcCt22B.10.000018
ORF8101R101PcGtcCt22B.1.10.000036
ORF8101R101CCgtTgt22B.1.10.000036
ORF8101R101RcgTcgC22B.1.1.1760.000879
ORF8101R101delCGT---22B.1.1.2140.000111
ORF8101R101PcGtcCt22B.1.1.2840.000215
ORF8101R101LcGtcTt22B.1.1.5260.007092
ORF8101R101delCGT---22B.1.1770.000026
ORF8101R101RcgTcgC22B.1.1770.000026
ORF8101R101delCGT---22B.1.177.480.00625
ORF8101R101LcGtcTt22B.1.177.800.003824
ORF8101R101CCgtTgt22B.1.2580.000133
ORF8101R101RcgTcgC22B.1.258.170.000208
ORF8101R101delCGT---22B.1.3510.000059
ORF8101R101RcgTcgC12B.1.3510.00003
ORF8101R101RcgTcgG12B.1.3510.00003
ORF8101R101delCGT---22B.1.360.000292
ORF8101R101HcGtcAt22B.1.4270.000101
ORF8101R101LcGtcTt22B.1.4290.000047
ORF8101R101HcGtcAt22B.1.5170.000854
ORF8101R101RcgTcgG12B.1.5260.000024
ORF8101R101RcgTcgC12B.1.5260.000024
ORF8101R101delCGT---22B.1.6370.000146
ORF8101R101RcgTcgC22D.20.00015
ORF8101R101LcGtcTt22P.1.170.000324
ORF8101R101HcGtcAt22P.1.70.000639
ORF8101R101LcGtcTt22Q.80.00033
ORF8101R101CCgtTgt110.055556
ORF8101R101GCgtGgt110.055556
ORF8101R101del2CGt--t11AE.40.043478
ORF8101R101QcGTcAA11All0
ORF8101R101GCgtGgt11All0
ORF8101R101LcGtcTt11AY.10.000396
ORF8101R101RcgTcgC11AY.1010.00049
ORF8101R101LcGtcTt11AY.1060.000335
ORF8101R101HcGtcAt11AY.1080.001103
ORF8101R101delCGT---11AY.1080.001103
ORF8101R101HcGtcAt11AY.1100.000113
ORF8101R101LcGtcTt11AY.1100.000113
ORF8101R101HcGtcAt11AY.116.10.000311
ORF8101R101delCGT---11AY.116.10.000311
ORF8101R101CCgtTgt11AY.1170.000085
ORF8101R101HcGtcAt11AY.1170.000085
ORF8101R101delCGT---11AY.1180.000063
ORF8101R101CCgtTgt11AY.1190.000035
ORF8101R101delCGT---11AY.1200.000037
ORF8101R101LcGtcTt11AY.1210.000135
ORF8101R101CCgtTgt11AY.140.000088
ORF8101R101delCGT---11AY.190.00114
ORF8101R101CCgtTgt11AY.20.000356
ORF8101R101HcGtcAt11AY.200.000039
ORF8101R101LcGtcTt11AY.270.000065
ORF8101R101CCgtTgt11AY.290.000016
ORF8101R101LcGtcTt11AY.29.10.000221
ORF8101R101RcgTcgC11AY.34.10.00051
ORF8101R101LcGtcTt11AY.34.10.00051
ORF8101R101CCgtTgt11AY.390.000025
ORF8101R101del1cgTcg-11AY.390.000025
ORF8101R101PcGtcCt11AY.390.000025
ORF8101R101delCGT---11AY.390.000025
ORF8101R101HcGtcAt11AY.4.20.000022
ORF8101R101delCGT---11AY.4.20.000022
ORF8101R101HcGtcAt11AY.420.00004
ORF8101R101SCgtAgt11AY.430.000004
ORF8101R101RcgTcgC11AY.430.000004
ORF8101R101del1cgTcg-11AY.440.000006
ORF8101R101HcGtcAt11AY.450.000122
ORF8101R101RcgTcgC11AY.450.000122
ORF8101R101LcGtcTt11AY.460.000104
ORF8101R101LcGtcTt11AY.46.30.000934
ORF8101R101RcgTcgC11AY.46.40.000165
ORF8101R101RcgTcgC11AY.46.60.000072
ORF8101R101HcGtcAt11AY.46.60.000072
ORF8101R101HcGtcAt11AY.50.000021
ORF8101R101LcGtcTt11AY.5.40.000277
ORF8101R101delCGT---11AY.580.000907
ORF8101R101CCgtTgt11AY.590.00053
ORF8101R101delCGT---11AY.590.00053
ORF8101R101LcGtcTt11AY.590.00053
ORF8101R101HcGtcAt11AY.60.000041
ORF8101R101CCgtTgt11AY.600.000938
ORF8101R101LcGtcTt11AY.610.000105
ORF8101R101LcGtcTt11AY.620.000436
ORF8101R101HcGtcAt11AY.650.000533
ORF8101R101HcGtcAt11AY.680.000274
ORF8101R101LcGtcTt11AY.680.000274
ORF8101R101RcgTcgC11AY.7.10.000113
ORF8101R101LcGtcTt11AY.740.000116
ORF8101R101LcGtcTt11AY.840.000437
ORF8101R101HcGtcAt11AY.9.20.000037
ORF8101R101delCGT---11AY.910.00073
ORF8101R101RcgTcgC11AY.910.00073
ORF8101R101LcGtcTt11AY.950.000761
ORF8101R101LcGtcTt11AY.980.000079
ORF8101R101LcGtcTt11AY.99.20.000092
ORF8101R101LcGtcTt11AZ.50.003509
ORF8101R101LcGtcTt11B0.000128
ORF8101R101CCgtTgt11B0.000128
ORF8101R101RcgTcgC11B0.000128
ORF8101R101QcGTcAA11B.1.10.000018
ORF8101R101LcGtcTt11B.1.1.10.000327
ORF8101R101delCGT---11B.1.1.1280.007092
ORF8101R101LcGtcTt11B.1.1.1570.000913
ORF8101R101delCGT---11B.1.1.1740.003378
ORF8101R101LcGtcTt11B.1.1.1890.001513
ORF8101R101HcGtcAt11B.1.1.1920.002309
ORF8101R101HcGtcAt11B.1.1.2160.00089
ORF8101R101delCGT---11B.1.1.2160.00089
ORF8101R101LcGtcTt11B.1.1.2160.00089
ORF8101R101RcgTcgC11B.1.1.2280.003049
ORF8101R101delCGT---11B.1.1.2580.003257
ORF8101R101delCGT---11B.1.1.260.005236
ORF8101R101LcGtcTt11B.1.1.2630.001558
ORF8101R101CCgtTgt11B.1.1.2680.014925
ORF8101R101CCgtTgt11B.1.1.2770.000759
ORF8101R101HcGtcAt11B.1.1.280.000311
ORF8101R101RcgTcgC11B.1.1.280.000311
ORF8101R101RcgTcgC11B.1.1.2840.000107
ORF8101R101LcGtcTt11B.1.1.3010.001179
ORF8101R101HcGtcAt11B.1.1.3060.000438
ORF8101R101RcgTcgC11B.1.1.310.066667
ORF8101R101LcGtcTt11B.1.1.3180.000302
ORF8101R101delCGT---11B.1.1.3540.004386
ORF8101R101delCGT---11B.1.1.3690.000446
ORF8101R101delCGT---11B.1.1.370.000193
ORF8101R101RcgTcgC11B.1.1.3700.012658
ORF8101R101HcGtcAt11B.1.1.3720.000689
ORF8101R101HcGtcAt11B.1.1.3880.045455
ORF8101R101HcGtcAt11B.1.1.3960.045455
ORF8101R101SCGTTCA11B.1.1.3960.045455
ORF8101R101CCgtTgt11B.1.1.4320.001266
ORF8101R101HcGtcAt11B.1.1.4480.002033
ORF8101R101CCgtTgt11B.1.1.4620.008621
ORF8101R101LcGtcTt11B.1.1.4850.016667
ORF8101R101RcgTcgG11B.1.1.5190.00004
ORF8101R101del1CgT-gA11B.1.1.5190.00004
ORF8101R101HcGtcAt11B.1.1.5190.00004
ORF8101R101del2cGTc--11B.1.1.70.000001
ORF8101R101NCGtAAt11B.1.1.70.000001
ORF8101R101LcGtcTt11B.1.120.008
ORF8101R101delCGT---11B.1.1260.001276
ORF8101R101delCGT---11B.1.1580.02381
ORF8101R101RcgTcgC11B.1.1600.000031
ORF8101R101HcGtcAt11B.1.177.170.000821
ORF8101R101LcGtcTt11B.1.177.200.001517
ORF8101R101CCgtTgt11B.1.177.380.010417
ORF8101R101HcGtcAt11B.1.177.630.002703
ORF8101R101CCgtTgt11B.1.177.70.000165
ORF8101R101delCGT---11B.1.177.70.000165
ORF8101R101LcGtcTt11B.1.177.80.000752
ORF8101R101RcgTcgC11B.1.177.820.000477
ORF8101R101delCGT---11B.1.177.830.001481
ORF8101R101HcGtcAt11B.1.177.860.000183
ORF8101R101delCGT---11B.1.1950.005025
ORF8101R101RcgTcgG11B.1.20.000009
ORF8101R101del1Cgt-gt11B.1.20.000009
ORF8101R101CCgtTgt11B.1.20.000009
ORF8101R101LcGtcTt11B.1.2010.005682
ORF8101R101delCGT---11B.1.2100.002132
ORF8101R101RcgTcgC11B.1.2320.000537
ORF8101R101HcGtcAt11B.1.2430.00007
ORF8101R101del1CGT-TC11B.1.2430.00007
ORF8101R101HcGtcAt11B.1.2580.000067
ORF8101R101delCGT---11B.1.2580.000067
ORF8101R101delCGT---11B.1.258.120.007874
ORF8101R101delCGT---11B.1.258.170.000104
ORF8101R101CCgtTgt11B.1.258.170.000104
ORF8101R101LcGtcTt11B.1.2600.003344
ORF8101R101delCGT---11B.1.3130.006579
ORF8101R101delCGT---11B.1.3240.001605
ORF8101R101RcgTcgC11B.1.3290.000608
ORF8101R101delCGT---11B.1.3400.004292
ORF8101R101delCGT---11B.1.3410.022727
ORF8101R101LcGtcTt11B.1.3510.00003
ORF8101R101delCGT---11B.1.351.20.000303
ORF8101R101HcGtcAt11B.1.360.000146
ORF8101R101HcGtcAt11B.1.36.10.00114
ORF8101R101RcgTcgC11B.1.36.290.000517
ORF8101R101delCGT---11B.1.36.290.000517
ORF8101R101LcGtcTt11B.1.36.310.001751
ORF8101R101LcGtcTt11B.1.36.390.002217
ORF8101R101CCgtTgt11B.1.36.80.001
ORF8101R101LcGtcTt11B.1.3610.001289
ORF8101R101CCgtTgt11B.1.3720.010989
ORF8101R101LcGtcTt11B.1.3990.001934
ORF8101R101del2CGt--t11B.1.4290.000024
ORF8101R101HcGtcAt11B.1.4290.000024
ORF8101R101RcgTcgC11B.1.4290.000024
ORF8101R101delCGT---11B.1.4650.003802
ORF8101R101delCGT---11B.1.4680.005714
ORF8101R101RcgTcgC11B.1.4700.001404
ORF8101R101delCGT---11B.1.5240.001406
ORF8101R101LcGtcTt11B.1.5250.000113
ORF8101R101CCgtTgt11B.1.5260.000024
ORF8101R101RcgTcgC11B.1.5370.02
ORF8101R101LcGtcTt11B.1.5600.00463
ORF8101R101CCgtTgt11B.1.5610.000397
ORF8101R101CCgtTgt11B.1.5640.000426
ORF8101R101delCGT---11B.1.5650.00081
ORF8101R101LcGtcTt11B.1.5680.001111
ORF8101R101LcGtcTt11B.1.5770.000687
ORF8101R101CCgtTgt11B.1.5820.000491
ORF8101R101CCgtTgt11B.1.5960.000087
ORF8101R101delCGT---11B.1.5960.000087
ORF8101R101delCGT---11B.1.5970.00463
ORF8101R101HcGtcAt11B.1.6000.005848
ORF8101R101RcgTcgC11B.1.617.10.000129
ORF8101R101HcGtcAt11B.1.617.10.000129
ORF8101R101NCGtAAt11B.1.617.20.000004
ORF8101R101SCgtAgt11B.1.617.20.000004
ORF8101R101PcGtcCt11B.1.617.20.000004
ORF8101R101del1cgTcg-11B.1.617.20.000004
ORF8101R101CCgtTgt11B.1.621.10.000506
ORF8101R101RcgTcgC11B.1.6370.000073
ORF8101R101RcgTcgC11B.40.002208
ORF8101R101delCGT---11B.400.000364
ORF8101R101RcgTcgC11C.160.00106
ORF8101R101delCGT---11C.260.007353
ORF8101R101RcgTcgC11C.350.000774
ORF8101R101LcGtcTt11C.370.000116
ORF8101R101RcgTcgC11C.370.000116
ORF8101R101CCgtTgt11D.20.000075
ORF8101R101PcGtcCt11P.10.000016
ORF8101R101RcgTcgC11P.10.000016
ORF8101R101RcgTcgC11P.1.140.000048
ORF8101R101delCGT---11P.1.150.000232
ORF8101R101HcGtcAt11P.1.160.000374
ORF8101R101RcgTcgC11P.20.000187
ORF8101R101HcGtcAt11P.30.001595
ORF8101R101RcgTcgC11Q.10.000126
ORF8101R101delCGT---11Q.20.000613
ORF8101R101RcgTcgC11Q.30.000145
ORF8101R101delCGT---11Q.30.000145
ORF8101R101RcgTcgG11Q.80.000165
ORF8101R101delCGT---11R.10.00009
ORF8101R101LcGtcTt11S.10.00495

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.