CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = T40del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b40T40del1delaCta-t1580.53333327873-27875
ORF7b40T40del1delacTac-1550.33333327873-27875
ORF7b40T40del1delACT-NN1510.066666727873-27875
ORF7b40T40del1delAct-ct1510.066666727873-27875

Details of the mutation T40del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b40T40del1aCta-t815All0.000002
ORF7b40T40del1acTac-515All0.000001
ORF7b40T40del1Act-ct115All0
ORF7b40T40del1ACT-NN115All0
ORF7b40T40del1aCta-t22AY.40.000003
ORF7b40T40del1aCta-t12AY.430.000004
ORF7b40T40del1Act-ct12AY.430.000004
ORF7b40T40del1aCta-t22AY.440.000012
ORF7b40T40del1acTac-22B.1.1.70.000002
ORF7b40T40del1aCta-t11AY.30.00001
ORF7b40T40del1aCta-t11AY.60.000041
ORF7b40T40del1ACT-NN11AY.960.002075
ORF7b40T40del1acTac-11B.1.1.3180.000302
ORF7b40T40del1acTac-11B.1.1260.001276
ORF7b40T40del1aCta-t11B.1.617.10.000129
ORF7b40T40del1acTac-11P.10.000016