CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = S5del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b5S5del2delTCa--a25210.8427768-27770
ORF7b5S5del2deltCAt--2540.1627768-27770

Details of the mutation S5del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b5S5del2TCa--a2125All0.000004
ORF7b5S5del2tCAt--425All0.000001
ORF7b5S5del2TCa--a1014B.1.1.70.000009
ORF7b5S5del2tCAt--414B.1.1.70.000004
ORF7b5S5del2TCa--a33B.1.20.000026
ORF7b5S5del2TCa--a22AY.250.000012
ORF7b5S5del2TCa--a11AY.260.000028
ORF7b5S5del2TCa--a11AY.440.000006
ORF7b5S5del2TCa--a11B.10.000009
ORF7b5S5del2TCa--a11B.1.3510.00003
ORF7b5S5del2TCa--a11B.1.617.20.000004
ORF7b5S5del2TCa--a11B.1.6210.000089