CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = S31del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b31S31del1deltcAtc-30250.83333327846-27848
ORF7b31S31del1deltCat-a3030.127846-27848
ORF7b31S31del1delTca-ca3020.066666727846-27848

Details of the mutation S31del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b31S31del1tcAtc-2530All0.000005
ORF7b31S31del1tCat-a330All0.000001
ORF7b31S31del1Tca-ca230All0
ORF7b31S31del1tcAtc-1717B0.002173
ORF7b31S31del1tcAtc-34B.1.1.70.000003
ORF7b31S31del1Tca-ca14B.1.1.70.000001
ORF7b31S31del1tcAtc-33B.1.20.000026
ORF7b31S31del1tCat-a22AY.30.00002
ORF7b31S31del1tcAtc-11AY.60.000041
ORF7b31S31del1tCat-a11B.1.36.160.001425
ORF7b31S31del1tcAtc-11B.1.5260.000024
ORF7b31S31del1Tca-ca11B.1.617.20.000004