CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = L4del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b4L4del2delcTTc--45300.66666727765-27767
ORF7b4L4del2delCTt--t45150.33333327765-27767

Details of the mutation L4del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b4L4del2cTTc--3045All0.000006
ORF7b4L4del2CTt--t1545All0.000003
ORF7b4L4del2cTTc--68B.1.1.70.000005
ORF7b4L4del2CTt--t28B.1.1.70.000002
ORF7b4L4del2CTt--t77AY.250.000042
ORF7b4L4del2cTTc--44A0.001548
ORF7b4L4del2CTt--t24AY.40.000003
ORF7b4L4del2cTTc--24AY.40.000003
ORF7b4L4del2cTTc--44AY.470.000124
ORF7b4L4del2cTTc--44B.1.1.3170.001647
ORF7b4L4del2cTTc--33B.1.1.2430.012245
ORF7b4L4del2cTTc--22AY.1180.000125
ORF7b4L4del2cTTc--12B.10.000009
ORF7b4L4del2CTt--t12B.10.000009
ORF7b4L4del2CTt--t11AY.1030.000006
ORF7b4L4del2CTt--t11B.1.10.000018
ORF7b4L4del2cTTc--11B.1.438.10.000107
ORF7b4L4del2CTt--t11B.1.5260.000024
ORF7b4L4del2cTTc--11B.1.6040.017241
ORF7b4L4del2cTTc--11B.1.617.20.000004
ORF7b4L4del2cTTc--11P.1.40.000977