CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = L4P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b4L4PnonsyncTtcCt1291270.98449627765-27767
ORF7b4L4PnonsyncTTcCA12920.015503927765-27767

Details of the mutation L4P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b4L4PcTtcCt127129All0.000024
ORF7b4L4PcTTcCA2129All0
ORF7b4L4PcTtcCt6666AY.1030.00041
ORF7b4L4PcTtcCt2626B.1.1.70.000023
ORF7b4L4PcTtcCt55AY.40.000008
ORF7b4L4PcTTcCA240.111111
ORF7b4L4PcTtcCt240.111111
ORF7b4L4PcTtcCt44B.1.617.20.000015
ORF7b4L4PcTtcCt33B.1.466.20.001174
ORF7b4L4PcTtcCt22B.10.000018
ORF7b4L4PcTtcCt22B.1.1.5190.000079
ORF7b4L4PcTtcCt22B.1.1600.000062
ORF7b4L4PcTtcCt22B.1.20.000018
ORF7b4L4PcTtcCt22B.1.3510.000059
ORF7b4L4PcTtcCt11AY.1010.00049
ORF7b4L4PcTtcCt11AY.230.00007
ORF7b4L4PcTtcCt11AY.260.000028
ORF7b4L4PcTtcCt11AY.34.10.00051
ORF7b4L4PcTtcCt11AY.440.000006
ORF7b4L4PcTtcCt11AY.470.000031
ORF7b4L4PcTtcCt11AY.710.000475
ORF7b4L4PcTtcCt11AY.9.20.000037
ORF7b4L4PcTtcCt11B.1.2580.000067
ORF7b4L4PcTtcCt11D.20.000075
ORF7b4L4PcTtcCt11P.10.000016