CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = L25V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b25L25VnonsynCttGtt33250.75757627828-27830
ORF7b25L25VnonsynCtTGtG3330.090909127828-27830
ORF7b25L25VnonsynCtTGtC3330.090909127828-27830
ORF7b25L25VnonsynCtTGtA3320.060606127828-27830

Details of the mutation L25V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b25L25VCttGtt2533All0.000005
ORF7b25L25VCtTGtC333All0.000001
ORF7b25L25VCtTGtG333All0.000001
ORF7b25L25VCtTGtA233All0
ORF7b25L25VCttGtt410B.10.000037
ORF7b25L25VCtTGtC310B.10.000027
ORF7b25L25VCtTGtG210B.10.000018
ORF7b25L25VCtTGtA110B.10.000009
ORF7b25L25VCttGtt13B.1.10.000018
ORF7b25L25VCtTGtA13B.1.10.000018
ORF7b25L25VCtTGtG13B.1.10.000018
ORF7b25L25VCttGtt33B.1.2430.000209
ORF7b25L25VCttGtt220.111111
ORF7b25L25VCttGtt22AY.1070.000932
ORF7b25L25VCttGtt22AY.430.000009
ORF7b25L25VCttGtt22B.1.1.70.000002
ORF7b25L25VCttGtt22B.1.20.000018
ORF7b25L25VCttGtt11AY.1030.000006
ORF7b25L25VCttGtt11AY.1190.000035
ORF7b25L25VCttGtt11AY.40.000002
ORF7b25L25VCttGtt11AY.46.60.000072
ORF7b25L25VCttGtt11B.1.1.2650.003155
ORF7b25L25VCttGtt11B.1.1.5190.00004
ORF7b25L25VCttGtt11B.1.617.20.000004