CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : Mut = F13del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b13F13del1delTtt-tt154912050.77792127792-27794
ORF7b13F13del1delttTtt-15493270.21110427792-27794
ORF7b13F13del1delTTT-NN154980.0051646227792-27794
ORF7b13F13del1delTTt-Nt154980.0051646227792-27794
ORF7b13F13del1delTTt-At154910.00064557827792-27794

Details of the mutation F13del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b13F13del1Ttt-tt12051549All0.00023
ORF7b13F13del1ttTtt-3271549All0.000063
ORF7b13F13del1TTT-NN81549All0.000002
ORF7b13F13del1TTt-Nt81549All0.000002
ORF7b13F13del1TTt-At11549All0
ORF7b13F13del1Ttt-tt137211B.1.1.70.000123
ORF7b13F13del1ttTtt-70211B.1.1.70.000063
ORF7b13F13del1TTt-Nt3211B.1.1.70.000003
ORF7b13F13del1TTT-NN1211B.1.1.70.000001
ORF7b13F13del1Ttt-tt172193AY.40.000268
ORF7b13F13del1ttTtt-20193AY.40.000031
ORF7b13F13del1TTt-At1193AY.40.000002
ORF7b13F13del1Ttt-tt146149B.10.001337
ORF7b13F13del1ttTtt-3149B.10.000027
ORF7b13F13del1Ttt-tt95101AY.30.000945
ORF7b13F13del1ttTtt-6101AY.30.00006
ORF7b13F13del1Ttt-tt7677AY.250.000457
ORF7b13F13del1ttTtt-177AY.250.000006
ORF7b13F13del1Ttt-tt4954B.1.617.20.000185
ORF7b13F13del1ttTtt-554B.1.617.20.000019
ORF7b13F13del1Ttt-tt3946AY.440.000237
ORF7b13F13del1ttTtt-646AY.440.000037
ORF7b13F13del1TTt-Nt146AY.440.000006
ORF7b13F13del1Ttt-tt3743AY.1030.00023
ORF7b13F13del1ttTtt-643AY.1030.000037
ORF7b13F13del1Ttt-tt3942P.10.000614
ORF7b13F13del1ttTtt-342P.10.000047
ORF7b13F13del1Ttt-tt2340B.1.20.000203
ORF7b13F13del1ttTtt-1640B.1.20.000141
ORF7b13F13del1TTT-NN140B.1.20.000009
ORF7b13F13del1ttTtt-3535B.1.2210.002486
ORF7b13F13del1ttTtt-3034AY.98.10.001453
ORF7b13F13del1Ttt-tt434AY.98.10.000194
ORF7b13F13del1Ttt-tt2929B.1.177.240.037565
ORF7b13F13del1ttTtt-2626N.100.764706
ORF7b13F13del1Ttt-tt1623AY.430.000071
ORF7b13F13del1ttTtt-723AY.430.000031
ORF7b13F13del1Ttt-tt1222B.1.10.000218
ORF7b13F13del1ttTtt-822B.1.10.000145
ORF7b13F13del1TTt-Nt122B.1.10.000018
ORF7b13F13del1TTT-NN122B.1.10.000018
ORF7b13F13del1Ttt-tt1818B.1.36.80.018
ORF7b13F13del1Ttt-tt1217B.1.5260.000282
ORF7b13F13del1ttTtt-517B.1.5260.000118
ORF7b13F13del1Ttt-tt1214AY.50.000248
ORF7b13F13del1ttTtt-214AY.50.000041
ORF7b13F13del1Ttt-tt1214B.1.4290.000282
ORF7b13F13del1TTT-NN114B.1.4290.000024
ORF7b13F13del1ttTtt-114B.1.4290.000024
ORF7b13F13del1Ttt-tt1313AY.80.007879
ORF7b13F13del1Ttt-tt713B.1.1.5190.000278
ORF7b13F13del1ttTtt-613B.1.1.5190.000238
ORF7b13F13del1ttTtt-1212AY.1130.001709
ORF7b13F13del1Ttt-tt1012AY.4.20.000217
ORF7b13F13del1TTT-NN112AY.4.20.000022
ORF7b13F13del1TTt-Nt112AY.4.20.000022
ORF7b13F13del1Ttt-tt1111AY.1000.000506
ORF7b13F13del1Ttt-tt1111AY.1090.008136
ORF7b13F13del1Ttt-tt1111AY.120.10.003531
ORF7b13F13del1Ttt-tt1010B.1.5780.178571
ORF7b13F13del1Ttt-tt99B.1.177.810.001704
ORF7b13F13del1Ttt-tt88AY.1180.000501
ORF7b13F13del1Ttt-tt68AY.980.000474
ORF7b13F13del1ttTtt-28AY.980.000158
ORF7b13F13del1Ttt-tt67AY.260.00017
ORF7b13F13del1ttTtt-17AY.260.000028
ORF7b13F13del1Ttt-tt77AY.750.000392
ORF7b13F13del1Ttt-tt56B.1.1.280.001556
ORF7b13F13del1ttTtt-16B.1.1.280.000311
ORF7b13F13del1Ttt-tt66B.1.1.2980.005172
ORF7b13F13del1Ttt-tt56B.1.1770.000066
ORF7b13F13del1ttTtt-16B.1.1770.000013
ORF7b13F13del1Ttt-tt35AY.1020.00008
ORF7b13F13del1ttTtt-15AY.1020.000027
ORF7b13F13del1TTT-NN15AY.1020.000027
ORF7b13F13del1ttTtt-45AY.200.000155
ORF7b13F13del1TTT-NN15AY.200.000039
ORF7b13F13del1Ttt-tt45AY.390.000099
ORF7b13F13del1ttTtt-15AY.390.000025
ORF7b13F13del1Ttt-tt55AY.460.00052
ORF7b13F13del1ttTtt-45AY.90.00027
ORF7b13F13del1Ttt-tt15AY.90.000068
ORF7b13F13del1Ttt-tt55B.1.1.3010.005896
ORF7b13F13del1Ttt-tt35B.1.3690.000856
ORF7b13F13del1ttTtt-25B.1.3690.00057
ORF7b13F13del1Ttt-tt44AY.230.000279
ORF7b13F13del1Ttt-tt44AY.3.10.000341
ORF7b13F13del1ttTtt-24AY.46.60.000144
ORF7b13F13del1Ttt-tt24AY.46.60.000144
ORF7b13F13del1Ttt-tt34AY.700.000626
ORF7b13F13del1ttTtt-14AY.700.000209
ORF7b13F13del1Ttt-tt34AY.9.20.00011
ORF7b13F13del1ttTtt-14AY.9.20.000037
ORF7b13F13del1Ttt-tt34AY.99.20.000276
ORF7b13F13del1ttTtt-14AY.99.20.000092
ORF7b13F13del1ttTtt-44B.1.1.330.001684
ORF7b13F13del1ttTtt-44B.1.177.860.000734
ORF7b13F13del1Ttt-tt44C.1.20.017021
ORF7b13F13del1Ttt-tt34P.1.140.000143
ORF7b13F13del1ttTtt-14P.1.140.000048
ORF7b13F13del1Ttt-tt33AY.116.10.000934
ORF7b13F13del1Ttt-tt23AY.420.00008
ORF7b13F13del1ttTtt-13AY.420.00004
ORF7b13F13del1Ttt-tt23AY.540.000191
ORF7b13F13del1TTt-Nt13AY.540.000095
ORF7b13F13del1Ttt-tt33AY.60.000123
ORF7b13F13del1Ttt-tt33B.1.1.2220.000612
ORF7b13F13del1Ttt-tt33B.1.1.4340.001046
ORF7b13F13del1Ttt-tt33B.1.1600.000094
ORF7b13F13del1Ttt-tt33B.1.360.000438
ORF7b13F13del1ttTtt-33B.1.4160.003807
ORF7b13F13del1Ttt-tt33B.1.4270.000151
ORF7b13F13del1Ttt-tt23B.1.5960.000174
ORF7b13F13del1ttTtt-13B.1.5960.000087
ORF7b13F13del1Ttt-tt22A.10.000564
ORF7b13F13del1ttTtt-12AY.1080.001103
ORF7b13F13del1Ttt-tt12AY.1080.001103
ORF7b13F13del1Ttt-tt22AY.1100.000225
ORF7b13F13del1Ttt-tt22AY.1190.000071
ORF7b13F13del1TTt-Nt12AY.1200.000037
ORF7b13F13del1Ttt-tt12AY.1200.000037
ORF7b13F13del1ttTtt-22AY.1210.000271
ORF7b13F13del1ttTtt-12AY.190.00114
ORF7b13F13del1Ttt-tt12AY.190.00114
ORF7b13F13del1Ttt-tt22AY.39.10.000079
ORF7b13F13del1Ttt-tt22AY.470.000062
ORF7b13F13del1Ttt-tt22AY.560.00321
ORF7b13F13del1Ttt-tt12AY.680.000274
ORF7b13F13del1TTT-NN12AY.680.000274
ORF7b13F13del1ttTtt-22B.1.1.2160.001781
ORF7b13F13del1Ttt-tt22B.1.1.2320.00363
ORF7b13F13del1Ttt-tt22B.1.1.3060.000877
ORF7b13F13del1Ttt-tt22B.1.1.3180.000604
ORF7b13F13del1Ttt-tt22B.1.1.710.012121
ORF7b13F13del1Ttt-tt22B.1.221.30.001667
ORF7b13F13del1Ttt-tt22B.1.3110.000549
ORF7b13F13del1ttTtt-12B.1.3510.00003
ORF7b13F13del1Ttt-tt12B.1.3510.00003
ORF7b13F13del1Ttt-tt22B.1.351.30.001753
ORF7b13F13del1ttTtt-22B.1.5090.001732
ORF7b13F13del1ttTtt-22B.1.5250.000226
ORF7b13F13del1Ttt-tt22B.1.6320.013423
ORF7b13F13del1Ttt-tt22D.20.00015
ORF7b13F13del1Ttt-tt22P.1.100.000539
ORF7b13F13del1ttTtt-12P.1.70.000319
ORF7b13F13del1Ttt-tt12P.1.70.000319
ORF7b13F13del1Ttt-tt11AD.20.000219
ORF7b13F13del1Ttt-tt11AU.30.00211
ORF7b13F13del1Ttt-tt11AY.1170.000085
ORF7b13F13del1Ttt-tt11AY.140.000088
ORF7b13F13del1Ttt-tt11AY.290.000016
ORF7b13F13del1Ttt-tt11AY.330.000067
ORF7b13F13del1Ttt-tt11AY.340.000097
ORF7b13F13del1ttTtt-11AY.4.10.000737
ORF7b13F13del1Ttt-tt11AY.4.30.000842
ORF7b13F13del1Ttt-tt11AY.450.000122
ORF7b13F13del1ttTtt-11AY.46.30.000934
ORF7b13F13del1Ttt-tt11AY.490.003195
ORF7b13F13del1ttTtt-11AY.590.00053
ORF7b13F13del1Ttt-tt11AY.610.000105
ORF7b13F13del1Ttt-tt11AY.75.10.00018
ORF7b13F13del1ttTtt-11AY.830.001724
ORF7b13F13del1ttTtt-11AY.9.10.000084
ORF7b13F13del1Ttt-tt11AY.920.000287
ORF7b13F13del1Ttt-tt11B0.000128
ORF7b13F13del1ttTtt-11B.1.1.10.000327
ORF7b13F13del1Ttt-tt11B.1.1.1650.015385
ORF7b13F13del1ttTtt-11B.1.1.2200.001859
ORF7b13F13del1ttTtt-11B.1.1.2530.002506
ORF7b13F13del1Ttt-tt11B.1.1.3050.003861
ORF7b13F13del1Ttt-tt11B.1.1.440.00241
ORF7b13F13del1Ttt-tt11B.1.1490.003425
ORF7b13F13del1Ttt-tt11B.1.177.210.000076
ORF7b13F13del1Ttt-tt11B.1.177.580.001332
ORF7b13F13del1Ttt-tt11B.1.1790.003759
ORF7b13F13del1Ttt-tt11B.1.1990.004132
ORF7b13F13del1Ttt-tt11B.1.2400.000216
ORF7b13F13del1ttTtt-11B.1.2430.00007
ORF7b13F13del1Ttt-tt11B.1.2650.001271
ORF7b13F13del1Ttt-tt11B.1.3490.000715
ORF7b13F13del1ttTtt-11B.1.36.220.001208
ORF7b13F13del1Ttt-tt11B.1.36.260.002857
ORF7b13F13del1Ttt-tt11B.1.3980.002976
ORF7b13F13del1Ttt-tt11B.1.4000.000429
ORF7b13F13del1Ttt-tt11B.1.4260.001009
ORF7b13F13del1Ttt-tt11B.1.466.20.000391
ORF7b13F13del1Ttt-tt11B.1.5230.002451
ORF7b13F13del1Ttt-tt11B.1.5640.000426
ORF7b13F13del1Ttt-tt11B.1.5650.00081
ORF7b13F13del1Ttt-tt11B.1.5750.000303
ORF7b13F13del1Ttt-tt11B.1.6090.000479
ORF7b13F13del1Ttt-tt11B.1.6200.000946
ORF7b13F13del1ttTtt-11B.60.00091
ORF7b13F13del1Ttt-tt11P.1.120.000484
ORF7b13F13del1Ttt-tt11P.20.000187
ORF7b13F13del1Ttt-tt11Q.80.000165
ORF7b13F13del1Ttt-tt11R.10.00009