CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : CodonNum = 41

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b41C41FnonsyntGttTt416241590.99927927876-27878
ORF7b41C41FnonsyntGTtTC416230.00072080727876-27878
ORF7b41C41CsyntgTtgC31963196127876-27878
ORF7b41C41deldelTGT---396396127876-27878
ORF7b41C41SnonsyntGttCt3823050.79842927876-27878
ORF7b41C41SnonsynTgtAgt382770.20157127876-27878
ORF7b41C41YnonsyntGttAt186186127876-27878
ORF7b41C41WnonsyntgTtgG107107127876-27878
ORF7b41C41RnonsynTgtCgt94880.9361727876-27878
ORF7b41C41RnonsynTgTCgA9430.031914927876-27878
ORF7b41C41RnonsynTgTAgA9420.021276627876-27878
ORF7b41C41RnonsynTgTCgC9410.010638327876-27878
ORF7b41C41VnonsynTGtGTt87860.98850627876-27878
ORF7b41C41VnonsynTGTGTC8710.011494327876-27878
ORF7b41C41GnonsynTgtGgt64630.98437527876-27878
ORF7b41C41GnonsynTgTGgA6410.01562527876-27878
ORF7b41C41del2deltGTt--63590.93650827876-27878
ORF7b41C41del2delTGt--t6330.04761927876-27878
ORF7b41C41del2delTGT--S6310.01587327876-27878
ORF7b41C41del1deltGtt-t28140.527876-27878
ORF7b41C41del1deltgTtg-28110.39285727876-27878
ORF7b41C41del1delTGTBD-2820.071428627876-27878
ORF7b41C41del1delTgTAg-2810.035714327876-27878
ORF7b41C41XnonsyntgTtgA1070.727876-27878
ORF7b41C41XnonsyntGTtAA1030.327876-27878
ORF7b41C41LnonsynTGtCTt530.627876-27878
ORF7b41C41LnonsyntGTtTG510.227876-27878
ORF7b41C41LnonsynTGTCTC510.227876-27878
ORF7b41C41HnonsynTGtCAt33127876-27878
ORF7b41C41QnonsynTGTCAA33127876-27878
ORF7b41C41NnonsynTGtAAt22127876-27878
ORF7b41C41KnonsynTGTAAA22127876-27878
ORF7b41C41DnonsynTGtGAt22127876-27878
ORF7b41C41InonsynTGtATt11127876-27878
ORF7b41C41EnonsynTGTGAA11127876-27878

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b41C41FtGttTt41594162All0.000795
ORF7b41C41FtGTtTC34162All0.000001
ORF7b41C41CtgTtgC31963196All0.000611
ORF7b41C41CtgTtgC26552655AY.680.7268
ORF7b41C41FtGttTt610610B.1.1600.019024
ORF7b41C41FtGttTt462462B.1.1.70.000414
ORF7b41C41FtGttTt409409B.1.160.260.990315
ORF7b41C41delTGT---396396All0.000076
ORF7b41C41StGttCt305382All0.000058
ORF7b41C41STgtAgt77382All0.000015
ORF7b41C41FtGttTt253253AY.40.000394
ORF7b41C41YtGttAt186186All0.000036
ORF7b41C41FtGttTt167167AY.440.001016
ORF7b41C41FtGttTt160160B.1.1.2370.864865
ORF7b41C41StGttCt147154B.1.1.70.000132
ORF7b41C41STgtAgt7154B.1.1.70.000006
ORF7b41C41FtGttTt137137B.1.160.181
ORF7b41C41FtGttTt134134B.1.617.20.000505
ORF7b41C41FtGttTt128128B.1.1.4160.115837
ORF7b41C41CtgTtgC128128B.1.617.20.000482
ORF7b41C41FtGttTt117117AY.1030.000726
ORF7b41C41FtGttTt116116B.1.177.170.095238
ORF7b41C41FtGttTt115115AY.430.00051
ORF7b41C41FtGttTt114114A.60.584615
ORF7b41C41CtgTtgC108108AY.610.011316
ORF7b41C41WtgTtgG107107All0.00002
ORF7b41C41RTgtCgt8894All0.000017
ORF7b41C41RTgTCgA394All0.000001
ORF7b41C41RTgTAgA294All0
ORF7b41C41RTgTCgC194All0
ORF7b41C41VTGtGTt8687All0.000016
ORF7b41C41VTGTGTC187All0
ORF7b41C41CtgTtgC8686B.1.1.70.000077
ORF7b41C41FtGttTt8484B.1.10.001524
ORF7b41C41FtGttTt8484B.1.1770.001106
ORF7b41C41FtGttTt6767B.1.1.1760.029438
ORF7b41C41delTGT---6666AY.40.000103
ORF7b41C41FtGttTt6666B.1.20.000581
ORF7b41C41GTgtGgt6364All0.000012
ORF7b41C41GTgTGgA164All0
ORF7b41C41del2tGTt--5963All0.000011
ORF7b41C41del2TGt--t363All0.000001
ORF7b41C41del2TGT--S163All0
ORF7b41C41delTGT---6363B.1.1.70.000056
ORF7b41C41FtGttTt6161AY.250.000367
ORF7b41C41CtgTtgC5858B.1.177.590.935484
ORF7b41C41del2tGTt--5454B.1.1.70.000048
ORF7b41C41FtGttTt5151B.1.1.5190.002025
ORF7b41C41RTgtCgt5050B.1.1.70.000045
ORF7b41C41delTGT---4949B.1.2430.00341
ORF7b41C41FtGttTt4747B.10.00043
ORF7b41C41WtgTtgG4747B.1.1.70.000042
ORF7b41C41FtGttTt4041P.10.00063
ORF7b41C41FtGTtTC141P.10.000016
ORF7b41C41delTGT---3737AY.290.000584
ORF7b41C41FtGttTt3535AY.1070.016309
ORF7b41C41FtGttTt3535B.1.1.370.00675
ORF7b41C41FtGttTt3434AY.7.20.019016
ORF7b41C41FtGttTt3131B.1.177.120.004703
ORF7b41C41WtgTtgG3131B.1.2210.002202
ORF7b41C41VTGtGTt3030AY.980.00237
ORF7b41C41del1tGtt-t1428All0.000003
ORF7b41C41del1tgTtg-1128All0.000002
ORF7b41C41del1TGTBD-228All0
ORF7b41C41del1TgTAg-128All0
ORF7b41C41YtGttAt2727B.1.1.70.000024
ORF7b41C41FtGttTt2626AY.30.000259
ORF7b41C41FtGttTt2525B.1.1.3760.14881
ORF7b41C41FtGttTt2424B.1.1.3250.615385
ORF7b41C41GTgtGgt2222AY.390.000544
ORF7b41C41STgtAgt2022AY.430.000089
ORF7b41C41StGttCt222AY.430.000009
ORF7b41C41VTGtGTt2121B.1.617.20.000079
ORF7b41C41FtGttTt2020AY.1020.00053
ORF7b41C41STgtAgt2020B.1.1260.02551
ORF7b41C41FtGttTt2020C.370.002321
ORF7b41C41delTGT---1717B0.002173
ORF7b41C41YtGttAt1717B.1.20.00015
ORF7b41C41StGttCt1717B.1.4990.017857
ORF7b41C41YtGttAt1616AY.40.000025
ORF7b41C41YtGttAt1616AY.70.003136
ORF7b41C41CtgTtgC1616AY.75.10.002885
ORF7b41C41FtGttTt1515AY.390.000371
ORF7b41C41StGttCt1515B.1.1.2770.011381
ORF7b41C41YtGttAt1515B.1.36.80.015
ORF7b41C41STgtAgt914B.10.000082
ORF7b41C41StGttCt514B.10.000046
ORF7b41C41FtGttTt1313A.2.5.20.02044
ORF7b41C41RTgtCgt813P.10.000126
ORF7b41C41RTgTCgA313P.10.000047
ORF7b41C41RTgTCgC113P.10.000016
ORF7b41C41RTgTAgA113P.10.000016
ORF7b41C41FtGttTt1212AY.750.000672
ORF7b41C41FtGttTt1212B.1.177.60.011719
ORF7b41C41delTGT---1212B.1.20.000106
ORF7b41C41GTgtGgt1212B.1.617.20.000045
ORF7b41C41CtgTtgC1111AY.390.000272
ORF7b41C41CtgTtgC1111AY.40.000017
ORF7b41C41VTGtGTt1111AY.40.000017
ORF7b41C41CtgTtgC1111AY.440.000067
ORF7b41C41StGttCt1111B.1.1.10.003594
ORF7b41C41FtGttTt1111B.1.1.2220.002244
ORF7b41C41FtGttTt1111B.1.3510.000327
ORF7b41C41XtgTtgA710All0.000001
ORF7b41C41XtGTtAA310All0.000001
ORF7b41C41YtGttAt1010AY.1180.000626
ORF7b41C41delTGT---99AY.1030.000056
ORF7b41C41FtGttTt99AY.330.000601
ORF7b41C41delTGT---99AY.440.000055
ORF7b41C41CtgTtgC99B.10.000082
ORF7b41C41FtGttTt99B.1.1.3110.003223
ORF7b41C41FtGttTt99B.1.1.500.00611
ORF7b41C41FtGttTt99B.1.2210.000639
ORF7b41C41FtGttTt99B.1.36.290.004656
ORF7b41C41YtGttAt88AY.1110.001465
ORF7b41C41StGttCt78AY.40.000011
ORF7b41C41STgtAgt18AY.40.000002
ORF7b41C41FtGttTt88AY.540.000763
ORF7b41C41FtGttTt88B.1.1.2730.054054
ORF7b41C41StGttCt88B.1.1770.000105
ORF7b41C41StGttCt88B.1.258.110.003171
ORF7b41C41FtGttTt88B.1.4270.000404
ORF7b41C41CtgTtgC88P.10.000126
ORF7b41C41StGttCt48P.10.000063
ORF7b41C41STgtAgt48P.10.000063
ORF7b41C41CtgTtgC77AY.16.10.003289
ORF7b41C41StGttCt77AY.260.000198
ORF7b41C41CtgTtgC77AY.430.000031
ORF7b41C41YtGttAt77AY.440.000043
ORF7b41C41CtgTtgC77AY.550.006422
ORF7b41C41delTGT---77B.1.1.2650.022082
ORF7b41C41FtGttTt77B.1.1.280.002179
ORF7b41C41FtGttTt77B.1.1.330.002946
ORF7b41C41YtGttAt77B.1.1.5190.000278
ORF7b41C41FtGttTt77B.1.2580.000466
ORF7b41C41FtGttTt77B.1.351.20.002118
ORF7b41C41YtGttAt66AY.250.000036
ORF7b41C41delTGT---66AY.29.10.001323
ORF7b41C41FtGttTt66AY.360.000889
ORF7b41C41delTGT---66AY.430.000027
ORF7b41C41FtGttTt66AY.980.000474
ORF7b41C41StGttCt66B.1.10.000109
ORF7b41C41FtGttTt66B.1.1.2770.004552
ORF7b41C41delTGT---66B.1.1.3180.001811
ORF7b41C41FtGttTt66B.1.1.3980.019355
ORF7b41C41del1tGtt-t66B.1.360.000875
ORF7b41C41delTGT---66B.1.5260.000141
ORF7b41C41delTGT---66B.1.617.20.000023
ORF7b41C41StGttCt56B.1.617.20.000019
ORF7b41C41STgtAgt16B.1.617.20.000004
ORF7b41C41FtGttTt66B.1.6210.000531
ORF7b41C41LTGtCTt35All0.000001
ORF7b41C41LtGTtTG15All0
ORF7b41C41LTGTCTC15All0
ORF7b41C41CtgTtgC55AY.110.006693
ORF7b41C41FtGttTt55AY.1160.001434
ORF7b41C41FtGttTt55AY.1170.000423
ORF7b41C41FtGttTt55AY.240.002155
ORF7b41C41GTgtGgt55AY.40.000008
ORF7b41C41YtGttAt55AY.430.000022
ORF7b41C41StGttCt45AY.440.000024
ORF7b41C41STgtAgt15AY.440.000006
ORF7b41C41FtGttTt55AY.9.10.000419
ORF7b41C41FtGttTt55B.1.160.320.021459
ORF7b41C41CtgTtgC55B.1.1770.000066
ORF7b41C41GTgtGgt55B.1.177.70.000824
ORF7b41C41RTgtCgt55B.1.20.000044
ORF7b41C41StGttCt55B.1.214.20.002998
ORF7b41C41RTgtCgt55B.1.3510.000149
ORF7b41C41FtGttTt55B.1.360.00073
ORF7b41C41FtGttTt55B.1.3710.005612
ORF7b41C41FtGttTt55B.1.5230.012255
ORF7b41C41FtGttTt55B.1.617.10.000645
ORF7b41C41YtGttAt55B.1.617.20.000019
ORF7b41C41FtGttTt55P.1.140.000239
ORF7b41C41FtGttTt55P.1.150.001162
ORF7b41C41delTGT---440.222222
ORF7b41C41CtgTtgC44AY.1030.000025
ORF7b41C41YtGttAt44AY.1090.002959
ORF7b41C41FtGttTt44AY.1200.000149
ORF7b41C41delTGT---44AY.30.00004
ORF7b41C41FtGttTt44AY.39.10.000158
ORF7b41C41FtGttTt44AY.50.000083
ORF7b41C41YtGttAt44AY.50.000083
ORF7b41C41CtgTtgC44AY.750.000224
ORF7b41C41CtgTtgC44AY.9.20.000147
ORF7b41C41StGttCt44AY.9.20.000147
ORF7b41C41delTGT---44B.10.000037
ORF7b41C41YtGttAt44B.10.000037
ORF7b41C41RTgtCgt44B.10.000037
ORF7b41C41delTGT---44B.1.10.000073
ORF7b41C41delTGT---44B.1.1.2140.000222
ORF7b41C41FtGttTt44B.1.1.2160.003562
ORF7b41C41delTGT---44B.1.1.5190.000159
ORF7b41C41FtGttTt44B.1.1640.059701
ORF7b41C41WtgTtgG44B.1.177.720.013559
ORF7b41C41YtGttAt44B.1.2580.000266
ORF7b41C41FtGttTt44B.1.3950.028169
ORF7b41C41FtGttTt44B.1.3970.019417
ORF7b41C41FtGttTt44B.1.4700.005618
ORF7b41C41FtGttTt44B.1.5090.003463
ORF7b41C41FtGttTt44B.1.5890.030303
ORF7b41C41QTGTCAA33All0.000001
ORF7b41C41HTGtCAt33All0.000001
ORF7b41C41StGttCt33AY.1030.000019
ORF7b41C41FtGttTt33AY.116.10.000934
ORF7b41C41FtGttTt33AY.1190.000106
ORF7b41C41FtGttTt33AY.120.2.10.001495
ORF7b41C41CtgTtgC33AY.1210.000406
ORF7b41C41FtGttTt33AY.200.000117
ORF7b41C41delTGT---33AY.250.000018
ORF7b41C41FtGttTt33AY.260.000085
ORF7b41C41FtGttTt33AY.270.000194
ORF7b41C41FtGttTt33AY.290.000047
ORF7b41C41CtgTtgC33AY.30.00003
ORF7b41C41StGttCt33AY.320.001597
ORF7b41C41delTGT---33AY.390.000074
ORF7b41C41VTGtGTt33AY.4.20.000065
ORF7b41C41FtGttTt33AY.46.50.000595
ORF7b41C41FtGttTt33AY.470.000093
ORF7b41C41delTGT---33AY.470.000093
ORF7b41C41delTGT---33AY.480.001395
ORF7b41C41CtgTtgC33AY.650.001599
ORF7b41C41CtgTtgC33AY.740.000347
ORF7b41C41FtGttTt33AY.90.000203
ORF7b41C41FtGttTt33B.1.1.2140.000166
ORF7b41C41CtgTtgC33B.1.1.2220.000612
ORF7b41C41STgtAgt23B.1.1.250.001137
ORF7b41C41StGttCt13B.1.1.250.000569
ORF7b41C41FtGttTt33B.1.1.4320.003797
ORF7b41C41del1tgTtg-33B.1.1.70.000003
ORF7b41C41VTGtGTt33B.1.1.70.000003
ORF7b41C41GTgtGgt33B.1.1.70.000003
ORF7b41C41FtGttTt33B.1.1.700.001023
ORF7b41C41FtGttTt33B.1.110.30.002155
ORF7b41C41StGttCt33B.1.1470.002268
ORF7b41C41XtgTtgA33B.1.1600.000094
ORF7b41C41FtGttTt33B.1.177.190.004292
ORF7b41C41FtGttTt33B.1.177.210.000229
ORF7b41C41FtGttTt33B.1.177.370.081081
ORF7b41C41StGttCt33B.1.20.000026
ORF7b41C41FtGttTt33B.1.2430.000209
ORF7b41C41StGttCt33B.1.2580.0002
ORF7b41C41CtgTtgC33B.1.3510.000089
ORF7b41C41FtGttTt33B.1.4150.042857
ORF7b41C41StGttCt33B.1.499.10.333333
ORF7b41C41FtGttTt33B.1.5640.001278
ORF7b41C41WtgTtgG33B.1.617.20.000011
ORF7b41C41FtGttTt33B.1.960.056604
ORF7b41C41STgtAgt33D.20.000225
ORF7b41C41QTGTCAA33P.10.000047
ORF7b41C41HTGtCAt33P.10.000047
ORF7b41C41GTgtGgt23P.10.000032
ORF7b41C41GTgTGgA13P.10.000016
ORF7b41C41delTGT---33P.1.150.000697
ORF7b41C41StGttCt23P.20.000373
ORF7b41C41STgtAgt13P.20.000187
ORF7b41C41FtGttTt33Q.80.000495
ORF7b41C41GTgtGgt220.111111
ORF7b41C41del1TGTBD-220.111111
ORF7b41C41delTGT---22A.2.20.003378
ORF7b41C41StGttCt22A.23.10.001408
ORF7b41C41FtGttTt22AD.20.000438
ORF7b41C41delTGT---22AD.20.000438
ORF7b41C41KTGTAAA22All0
ORF7b41C41DTGtGAt22All0
ORF7b41C41NTGtAAt22All0
ORF7b41C41YtGttAt22AY.1000.000092
ORF7b41C41WtgTtgG22AY.1020.000053
ORF7b41C41FtGttTt22AY.1130.000285
ORF7b41C41delTGT---22AY.1180.000125
ORF7b41C41CtgTtgC22AY.160.000759
ORF7b41C41FtGttTt22AY.230.000139
ORF7b41C41CtgTtgC22AY.250.000012
ORF7b41C41YtGttAt22AY.260.000057
ORF7b41C41WtgTtgG22AY.30.00002
ORF7b41C41del2TGt--t22AY.300.000791
ORF7b41C41FtGttTt12AY.300.000396
ORF7b41C41FtGTtTC12AY.300.000396
ORF7b41C41FtGttTt22AY.350.000466
ORF7b41C41WtgTtgG22AY.40.000003
ORF7b41C41RTgtCgt22AY.40.000003
ORF7b41C41delTGT---22AY.4.20.000043
ORF7b41C41FtGttTt22AY.400.001929
ORF7b41C41delTGT---22AY.550.001835
ORF7b41C41FtGttTt22AY.740.000231
ORF7b41C41StGttCt22AY.740.000231
ORF7b41C41YtGttAt22AY.770.002255
ORF7b41C41delTGT---22AY.850.000854
ORF7b41C41FtGttTt22AY.9.20.000073
ORF7b41C41FtGttTt22AY.910.001461
ORF7b41C41WtgTtgG22AY.920.000575
ORF7b41C41CtgTtgC22AY.980.000158
ORF7b41C41del1tGtt-t22B.10.000018
ORF7b41C41WtgTtgG22B.10.000018
ORF7b41C41RTgtCgt22B.1.10.000036
ORF7b41C41VTGtGTt22B.1.10.000036
ORF7b41C41FtGttTt22B.1.1.10.000653
ORF7b41C41StGttCt22B.1.1.1000.08
ORF7b41C41del1tgTtg-22B.1.1.2140.000111
ORF7b41C41del2tGTt--22B.1.1.2220.000408
ORF7b41C41VTGtGTt22B.1.1.2770.001517
ORF7b41C41GTgtGgt22B.1.1.290.020619
ORF7b41C41VTGtGTt22B.1.1.290.020619
ORF7b41C41FtGttTt22B.1.1.290.020619
ORF7b41C41delTGT---22B.1.1.3060.000877
ORF7b41C41FtGttTt22B.1.1.3260.003521
ORF7b41C41WtgTtgG22B.1.1.330.000842
ORF7b41C41FtGttTt22B.1.1.3970.004505
ORF7b41C41STgtAgt22B.1.1.4320.002532
ORF7b41C41delTGT---22B.1.1260.002551
ORF7b41C41delTGT---22B.1.1770.000026
ORF7b41C41FtGttTt22B.1.177.440.001038
ORF7b41C41YtGttAt22B.1.177.770.001452
ORF7b41C41FtGttTt22B.1.177.810.000379
ORF7b41C41FtGttTt22B.1.177.820.000955
ORF7b41C41CtgTtgC22B.1.20.000018
ORF7b41C41CtgTtgC22B.1.2340.000264
ORF7b41C41FtGttTt22B.1.2390.002442
ORF7b41C41FtGttTt12B.1.2600.003344
ORF7b41C41FtGTtTC12B.1.2600.003344
ORF7b41C41delTGT---22B.1.360.000292
ORF7b41C41FtGttTt22B.1.3690.00057
ORF7b41C41delTGT---22B.1.4270.000101
ORF7b41C41StGttCt22B.1.4590.008163
ORF7b41C41del1tGtt-t22B.1.4800.004975
ORF7b41C41FtGttTt22B.1.5260.000047
ORF7b41C41FtGttTt22B.1.5880.00182
ORF7b41C41FtGttTt22B.1.5960.000174
ORF7b41C41FtGttTt22B.1.6370.000146
ORF7b41C41FtGttTt22C.360.001821
ORF7b41C41FtGttTt22D.20.00015
ORF7b41C41KTGTAAA22P.10.000032
ORF7b41C41YtGttAt22P.10.000032
ORF7b41C41NTGtAAt22P.10.000032
ORF7b41C41XtGTtAA12P.10.000016
ORF7b41C41LTGTCTC12P.10.000016
ORF7b41C41LTGtCTt12P.10.000016
ORF7b41C41XtgTtgA12P.10.000016
ORF7b41C41FtGttTt22P.1.120.000968
ORF7b41C41FtGttTt11A.10.000282
ORF7b41C41delTGT---11A.10.000282
ORF7b41C41delTGT---11A.23.10.000704
ORF7b41C41FtGttTt11A.23.10.000704
ORF7b41C41FtGttTt11AH.10.142857
ORF7b41C41ETGTGAA11All0
ORF7b41C41ITGtATt11All0
ORF7b41C41CtgTtgC11AY.10.000396
ORF7b41C41del1tgTtg-11AY.1000.000046
ORF7b41C41FtGttTt11AY.1000.000046
ORF7b41C41StGttCt11AY.1000.000046
ORF7b41C41GTgtGgt11AY.1020.000027
ORF7b41C41delTGT---11AY.1020.000027
ORF7b41C41VTGtGTt11AY.1020.000027
ORF7b41C41CtgTtgC11AY.1020.000027
ORF7b41C41YtGttAt11AY.1030.000006
ORF7b41C41RTgtCgt11AY.1030.000006
ORF7b41C41VTGtGTt11AY.1060.000335
ORF7b41C41delTGT---11AY.1080.001103
ORF7b41C41FtGttTt11AY.1080.001103
ORF7b41C41WtgTtgG11AY.110.001339
ORF7b41C41FtGttTt11AY.110.001339
ORF7b41C41CtgTtgC11AY.1140.000231
ORF7b41C41FtGttTt11AY.1150.005208
ORF7b41C41FtGttTt11AY.120.000316
ORF7b41C41delTGT---11AY.1200.000037
ORF7b41C41delTGT---11AY.1210.000135
ORF7b41C41CtgTtgC11AY.130.000161
ORF7b41C41FtGttTt11AY.140.000088
ORF7b41C41CtgTtgC11AY.190.00114
ORF7b41C41FtGttTt11AY.20.000356
ORF7b41C41STgtAgt11AY.250.000006
ORF7b41C41CtgTtgC11AY.260.000028
ORF7b41C41delTGT---11AY.260.000028
ORF7b41C41StGttCt11AY.270.000065
ORF7b41C41StGttCt11AY.280.00189
ORF7b41C41del1tgTtg-11AY.30.00001
ORF7b41C41YtGttAt11AY.30.00001
ORF7b41C41YtGttAt11AY.3.10.000085
ORF7b41C41FtGttTt11AY.3.10.000085
ORF7b41C41FtGttTt11AY.340.000097
ORF7b41C41del1tgTtg-11AY.370.000316
ORF7b41C41StGttCt11AY.380.000499
ORF7b41C41FtGttTt11AY.380.000499
ORF7b41C41YtGttAt11AY.390.000025
ORF7b41C41WtgTtgG11AY.39.10.00004
ORF7b41C41DTGtGAt11AY.40.000002
ORF7b41C41del1tGtt-t11AY.40.000002
ORF7b41C41GTgtGgt11AY.4.20.000022
ORF7b41C41YtGttAt11AY.4.20.000022
ORF7b41C41WtgTtgG11AY.4.20.000022
ORF7b41C41FtGttTt11AY.4.20.000022
ORF7b41C41delTGT---11AY.4.50.000107
ORF7b41C41FtGttTt11AY.420.00004
ORF7b41C41VTGtGTt11AY.430.000004
ORF7b41C41GTgtGgt11AY.430.000004
ORF7b41C41del1tgTtg-11AY.440.000006
ORF7b41C41VTGtGTt11AY.440.000006
ORF7b41C41RTgtCgt11AY.440.000006
ORF7b41C41GTgtGgt11AY.440.000006
ORF7b41C41FtGttTt11AY.450.000122
ORF7b41C41FtGttTt11AY.460.000104
ORF7b41C41VTGtGTt11AY.46.20.000635
ORF7b41C41WtgTtgG11AY.46.50.000198
ORF7b41C41LtGTtTG11AY.46.50.000198
ORF7b41C41StGttCt11AY.46.50.000198
ORF7b41C41VTGtGTt11AY.46.60.000072
ORF7b41C41YtGttAt11AY.470.000031
ORF7b41C41WtgTtgG11AY.50.000021
ORF7b41C41StGttCt11AY.50.000021
ORF7b41C41CtgTtgC11AY.520.000814
ORF7b41C41CtgTtgC11AY.530.000288
ORF7b41C41delTGT---11AY.560.001605
ORF7b41C41FtGttTt11AY.570.000656
ORF7b41C41delTGT---11AY.580.000907
ORF7b41C41CtgTtgC11AY.580.000907
ORF7b41C41FtGttTt11AY.60.000041
ORF7b41C41StGttCt11AY.610.000105
ORF7b41C41delTGT---11AY.610.000105
ORF7b41C41FtGttTt11AY.610.000105
ORF7b41C41CtgTtgC11AY.670.000464
ORF7b41C41delTGT---11AY.670.000464
ORF7b41C41FtGttTt11AY.690.000187
ORF7b41C41FtGttTt11AY.70.000196
ORF7b41C41delTGT---11AY.710.000475
ORF7b41C41CtgTtgC11AY.710.000475
ORF7b41C41StGttCt11AY.710.000475
ORF7b41C41delTGT---11AY.750.000056
ORF7b41C41FtGttTt11AY.75.10.00018
ORF7b41C41XtGTtAA11AY.75.10.00018
ORF7b41C41del2TGT--S11AY.840.000437
ORF7b41C41StGttCt11AY.950.000761
ORF7b41C41del2tGTt--11AY.980.000079
ORF7b41C41YtGttAt11AY.980.000079
ORF7b41C41FtGttTt11AY.98.10.000048
ORF7b41C41delTGT---11AY.990.001049
ORF7b41C41FtGttTt11B0.000128
ORF7b41C41XtGTtAA11B.10.000009
ORF7b41C41VTGtGTt11B.10.000009
ORF7b41C41GTgtGgt11B.10.000009
ORF7b41C41LTGtCTt11B.1.10.000018
ORF7b41C41del1tgTtg-11B.1.10.000018
ORF7b41C41YtGttAt11B.1.10.000018
ORF7b41C41XtgTtgA11B.1.10.000018
ORF7b41C41GTgtGgt11B.1.10.000018
ORF7b41C41YtGttAt11B.1.1.1860.003436
ORF7b41C41YtGttAt11B.1.1.2070.001182
ORF7b41C41FtGttTt11B.1.1.2070.001182
ORF7b41C41CtgTtgC11B.1.1.2140.000055
ORF7b41C41delTGT---11B.1.1.2160.00089
ORF7b41C41FtGttTt11B.1.1.2200.001859
ORF7b41C41del1tgTtg-11B.1.1.2220.000204
ORF7b41C41YtGttAt11B.1.1.2220.000204
ORF7b41C41del1tGtt-t11B.1.1.2320.001815
ORF7b41C41FtGttTt11B.1.1.250.000569
ORF7b41C41YtGttAt11B.1.1.250.000569
ORF7b41C41FtGttTt11B.1.1.2630.001558
ORF7b41C41del2tGTt--11B.1.1.2770.000759
ORF7b41C41RTgtCgt11B.1.1.2790.001121
ORF7b41C41delTGT---11B.1.1.2840.000107
ORF7b41C41FtGttTt11B.1.1.2840.000107
ORF7b41C41StGttCt11B.1.1.2980.000862
ORF7b41C41FtGttTt11B.1.1.3050.003861
ORF7b41C41FtGttTt11B.1.1.3070.002532
ORF7b41C41FtGttTt11B.1.1.3120.001912
ORF7b41C41CtgTtgC11B.1.1.3170.000412
ORF7b41C41FtGttTt11B.1.1.3170.000412
ORF7b41C41WtgTtgG11B.1.1.3170.000412
ORF7b41C41FtGttTt11B.1.1.3180.000302
ORF7b41C41STgtAgt11B.1.1.330.000421
ORF7b41C41CtgTtgC11B.1.1.330.000421
ORF7b41C41FtGttTt11B.1.1.3470.018182
ORF7b41C41FtGttTt11B.1.1.3590.027778
ORF7b41C41FtGttTt11B.1.1.390.00051
ORF7b41C41FtGttTt11B.1.1.3960.045455
ORF7b41C41YtGttAt11B.1.1.3960.045455
ORF7b41C41STgtAgt11B.1.1.3980.003226
ORF7b41C41delTGT---11B.1.1.440.00241
ORF7b41C41FtGttTt11B.1.1.4480.002033
ORF7b41C41STgtAgt11B.1.1.500.000679
ORF7b41C41FtGttTt11B.1.1.5070.008696
ORF7b41C41FtGttTt11B.1.1.5120.028571
ORF7b41C41WtgTtgG11B.1.1.5190.00004
ORF7b41C41CtgTtgC11B.1.1.5190.00004
ORF7b41C41FtGttTt11B.1.1.5230.001563
ORF7b41C41RTgtCgt11B.1.1.630.000386
ORF7b41C41XtgTtgA11B.1.1.70.000001
ORF7b41C41FtGttTt11B.1.1.830.00271
ORF7b41C41FtGttTt11B.1.1.880.071429
ORF7b41C41FtGttTt11B.1.1050.009615
ORF7b41C41del2tGTt--11B.1.110.30.000718
ORF7b41C41YtGttAt11B.1.1260.001276
ORF7b41C41del1TgTAg-11B.1.1260.001276
ORF7b41C41RTgTAgA11B.1.1260.001276
ORF7b41C41GTgtGgt11B.1.160.120.00641
ORF7b41C41VTGtGTt11B.1.160.120.00641
ORF7b41C41FtGttTt11B.1.160.120.00641
ORF7b41C41CtgTtgC11B.1.1640.014925
ORF7b41C41RTgtCgt11B.1.1770.000013
ORF7b41C41delTGT---11B.1.177.150.000631
ORF7b41C41FtGttTt11B.1.177.230.003236
ORF7b41C41CtgTtgC11B.1.177.320.00135
ORF7b41C41YtGttAt11B.1.177.440.000519
ORF7b41C41WtgTtgG11B.1.177.580.001332
ORF7b41C41FtGttTt11B.1.177.600.000218
ORF7b41C41VTGtGTt11B.1.177.620.001192
ORF7b41C41WtgTtgG11B.1.177.630.002703
ORF7b41C41FtGttTt11B.1.177.650.000665
ORF7b41C41delTGT---11B.1.177.70.000165
ORF7b41C41YtGttAt11B.1.177.720.00339
ORF7b41C41delTGT---11B.1.177.830.001481
ORF7b41C41delTGT---11B.1.1950.005025
ORF7b41C41VTGtGTt11B.1.20.000009
ORF7b41C41GTgtGgt11B.1.20.000009
ORF7b41C41WtgTtgG11B.1.20.000009
ORF7b41C41del2TGt--t11B.1.20.000009
ORF7b41C41StGttCt11B.1.2060.000816
ORF7b41C41delTGT---11B.1.2210.000071
ORF7b41C41FtGttTt11B.1.2320.000537
ORF7b41C41delTGT---11B.1.2340.000132
ORF7b41C41RTgtCgt11B.1.2340.000132
ORF7b41C41STgtAgt11B.1.2370.004975
ORF7b41C41delTGT---11B.1.2580.000067
ORF7b41C41FtGttTt11B.1.258.170.000104
ORF7b41C41del1tGtt-t11B.1.258.30.001675
ORF7b41C41VTGtGTt11B.1.3110.000275
ORF7b41C41FtGttTt11B.1.3150.006061
ORF7b41C41RTgtCgt11B.1.3430.020833
ORF7b41C41StGttCt11B.1.3510.00003
ORF7b41C41FtGttTt11B.1.351.50.0006
ORF7b41C41YtGttAt11B.1.360.000146
ORF7b41C41CtgTtgC11B.1.36.100.004785
ORF7b41C41YtGttAt11B.1.36.290.000517
ORF7b41C41StGttCt11B.1.36.290.000517
ORF7b41C41StGttCt11B.1.3670.000792
ORF7b41C41FtGttTt11B.1.3670.000792
ORF7b41C41delTGT---11B.1.3690.000285
ORF7b41C41STgtAgt11B.1.3710.001122
ORF7b41C41FtGttTt11B.1.3750.00082
ORF7b41C41delTGT---11B.1.4000.000429
ORF7b41C41FtGttTt11B.1.4040.001302
ORF7b41C41GTgtGgt11B.1.4220.000812
ORF7b41C41FtGttTt11B.1.4220.000812
ORF7b41C41VTGtGTt11B.1.4220.000812
ORF7b41C41FtGttTt11B.1.4260.001009
ORF7b41C41RTgtCgt11B.1.4270.00005
ORF7b41C41FtGttTt11B.1.4280.00102
ORF7b41C41RTgtCgt11B.1.4290.000024
ORF7b41C41delTGT---11B.1.4290.000024
ORF7b41C41FtGttTt11B.1.4290.000024
ORF7b41C41FtGttTt11B.1.4560.003268
ORF7b41C41FtGttTt11B.1.4590.004082
ORF7b41C41CtgTtgC11B.1.466.20.000391
ORF7b41C41delTGT---11B.1.4680.005714
ORF7b41C41delTGT---11B.1.4990.00105
ORF7b41C41StGttCt11B.1.5080.025641
ORF7b41C41delTGT---11B.1.5090.000866
ORF7b41C41CtgTtgC11B.1.5260.000024
ORF7b41C41XtgTtgA11B.1.5330.009615
ORF7b41C41FtGttTt11B.1.5610.000397
ORF7b41C41CtgTtgC11B.1.5640.000426
ORF7b41C41GTgtGgt11B.1.5650.00081
ORF7b41C41YtGttAt11B.1.5650.00081
ORF7b41C41FtGttTt11B.1.575.10.002439
ORF7b41C41delTGT---11B.1.5820.000491
ORF7b41C41FtGttTt11B.1.5820.000491
ORF7b41C41CtgTtgC11B.1.5950.000261
ORF7b41C41FtGttTt11B.1.5950.000261
ORF7b41C41FtGttTt11B.1.6090.000479
ORF7b41C41del1tGtt-t11B.1.617.10.000129
ORF7b41C41CtgTtgC11B.1.617.10.000129
ORF7b41C41VTGTGTC11B.1.617.10.000129
ORF7b41C41RTgtCgt11B.1.617.20.000004
ORF7b41C41LTGtCTt11B.1.617.20.000004
ORF7b41C41StGttCt11B.1.6270.00202
ORF7b41C41StGttCt11B.1.6280.000352
ORF7b41C41FtGttTt11B.1.6280.000352
ORF7b41C41delTGT---11B.1.6300.005236
ORF7b41C41FtGttTt11B.1.6320.006711
ORF7b41C41FtGttTt11B.120.00641
ORF7b41C41RTgtCgt11B.40.002208
ORF7b41C41StGttCt11C.160.00106
ORF7b41C41FtGttTt11C.160.00106
ORF7b41C41CtgTtgC11C.160.00106
ORF7b41C41StGttCt11C.230.005814
ORF7b41C41delTGT---11C.260.007353
ORF7b41C41delTGT---11C.370.000116
ORF7b41C41StGttCt11C.370.000116
ORF7b41C41YtGttAt11C.37.10.002618
ORF7b41C41RTgtCgt11D.20.000075
ORF7b41C41FtGttTt11N.50.001767
ORF7b41C41DTGtGAt11P.10.000016
ORF7b41C41ETGTGAA11P.10.000016
ORF7b41C41ITGtATt11P.10.000016
ORF7b41C41YtGttAt11P.1.120.000484
ORF7b41C41delTGT---11P.1.140.000048
ORF7b41C41StGttCt11P.1.150.000232
ORF7b41C41FtGttTt11P.20.000187
ORF7b41C41FtGttTt11Q.30.000145