CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7b : CodonNum = 4

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7b4L4FnonsynCttTtt24322432127765-27767
ORF7b4L4deldelCTT---11531153127765-27767
ORF7b4L4LsynctTctG161810.50310627765-27767
ORF7b4L4LsynctTctC161680.4223627765-27767
ORF7b4L4LsynctTctA16190.055900627765-27767
ORF7b4L4LsynCtTTtA16130.018633527765-27767
ORF7b4L4InonsynCttAtt140140127765-27767
ORF7b4L4PnonsyncTtcCt1291270.98449627765-27767
ORF7b4L4PnonsyncTTcCA12920.015503927765-27767
ORF7b4L4del1delCtt-tt103800.77669927765-27767
ORF7b4L4del1delctTct-103140.13592227765-27767
ORF7b4L4del1delcTtc-t10360.058252427765-27767
ORF7b4L4del1delCTt-Gt10320.019417527765-27767
ORF7b4L4del1delCTT-NN10310.0097087427765-27767
ORF7b4L4del2delcTTc--45300.66666727765-27767
ORF7b4L4del2delCTt--t45150.33333327765-27767
ORF7b4L4RnonsyncTtcGt1919127765-27767
ORF7b4L4VnonsynCttGtt77127765-27767
ORF7b4L4HnonsyncTtcAt66127765-27767
ORF7b4L4SnonsynCTtTCt520.427765-27767
ORF7b4L4SnonsynCTTTCA520.427765-27767
ORF7b4L4SnonsynCTtAGt510.227765-27767
ORF7b4L4CnonsynCTtTGt22127765-27767
ORF7b4L4NnonsynCTtAAt11127765-27767
ORF7b4L4TnonsynCTtACt11127765-27767
ORF7b4L4KnonsynCTTAAG11127765-27767
ORF7b4L4MnonsynCtTAtG11127765-27767

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7b4L4FCttTtt24322432All0.000465
ORF7b4L4delCTT---11531153All0.000221
ORF7b4L4FCttTtt11381138B.1.1.70.001019
ORF7b4L4delCTT---673673B.1.1.70.000602
ORF7b4L4LctTctG81161All0.000015
ORF7b4L4LctTctC68161All0.000013
ORF7b4L4LctTctA9161All0.000002
ORF7b4L4LCtTTtA3161All0.000001
ORF7b4L4ICttAtt140140All0.000027
ORF7b4L4PcTtcCt127129All0.000024
ORF7b4L4PcTTcCA2129All0
ORF7b4L4del1Ctt-tt80103All0.000015
ORF7b4L4del1ctTct-14103All0.000003
ORF7b4L4del1cTtc-t6103All0.000001
ORF7b4L4del1CTt-Gt2103All0
ORF7b4L4del1CTT-NN1103All0
ORF7b4L4FCttTtt9696P.10.001512
ORF7b4L4FCttTtt9393B.1.20.000819
ORF7b4L4FCttTtt8888B.1.1770.001159
ORF7b4L4delCTT---8181AY.40.000126
ORF7b4L4FCttTtt8181B.1.617.20.000305
ORF7b4L4FCttTtt7777AY.4.20.00167
ORF7b4L4FCttTtt6868B.10.000623
ORF7b4L4PcTtcCt6666AY.1030.00041
ORF7b4L4FCttTtt6262B.1.1.2740.313131
ORF7b4L4LctTctG5859AY.1030.00036
ORF7b4L4LctTctC159AY.1030.000006
ORF7b4L4del1Ctt-tt5859AY.40.00009
ORF7b4L4del1ctTct-159AY.40.000002
ORF7b4L4delCTT---5050B.1.20.00044
ORF7b4L4FCttTtt4646B.1.10.000834
ORF7b4L4del2cTTc--3045All0.000006
ORF7b4L4del2CTt--t1545All0.000003
ORF7b4L4ICttAtt4444AY.1190.001554
ORF7b4L4FCttTtt4242B.1.4290.000988
ORF7b4L4FCttTtt4141AY.40.000064
ORF7b4L4FCttTtt3535AY.430.000155
ORF7b4L4ICttAtt3535AY.460.003643
ORF7b4L4delCTT---3434P.10.000536
ORF7b4L4delCTT---3232B.1.5620.592593
ORF7b4L4FCttTtt2727Q.30.003916
ORF7b4L4PcTtcCt2626B.1.1.70.000023
ORF7b4L4FCttTtt2626B.1.2430.001809
ORF7b4L4RcTtcGt1919All0.000004
ORF7b4L4delCTT---1919B.10.000174
ORF7b4L4FCttTtt1919B.1.5260.000447
ORF7b4L4FCttTtt1818AY.610.001886
ORF7b4L4FCttTtt1818B.1.360.002626
ORF7b4L4FCttTtt1717A.2.50.008483
ORF7b4L4delCTT---1515AY.290.000237
ORF7b4L4FCttTtt1515B.1.177.80.011287
ORF7b4L4FCttTtt1515B.1.177.860.002752
ORF7b4L4delCTT---1515B.1.4270.000757
ORF7b4L4LctTctC1314AY.250.000078
ORF7b4L4LctTctG114AY.250.000006
ORF7b4L4FCttTtt1414AY.30.000139
ORF7b4L4FCttTtt1414AY.9.20.000514
ORF7b4L4delCTT---1313B.1.10.000236
ORF7b4L4FCttTtt1212AY.290.000189
ORF7b4L4FCttTtt1212C.370.001393
ORF7b4L4FCttTtt1212R.10.00108
ORF7b4L4FCttTtt1111AY.1030.000068
ORF7b4L4delCTT---1111AY.260.000311
ORF7b4L4FCttTtt1111B.1.1.5190.000437
ORF7b4L4LctTctC811B.1.1.70.000007
ORF7b4L4LctTctG211B.1.1.70.000002
ORF7b4L4LctTctA111B.1.1.70.000001
ORF7b4L4FCttTtt1111B.1.1600.000343
ORF7b4L4FCttTtt1010AY.250.00006
ORF7b4L4ICttAtt1010AY.430.000044
ORF7b4L4delCTT---1010AY.470.000311
ORF7b4L4FCttTtt1010B.1.1.430.149254
ORF7b4L4delCTT---1010B.1.2340.001319
ORF7b4L4FCttTtt1010B.1.3510.000297
ORF7b4L4delCTT---1010B.1.617.20.000038
ORF7b4L4delCTT---1010Q.80.001649
ORF7b4L4FCttTtt99AY.1020.000239
ORF7b4L4delCTT---99AY.250.000054
ORF7b4L4ICttAtt99AY.390.000222
ORF7b4L4FCttTtt99AY.390.000222
ORF7b4L4del1Ctt-tt99AY.430.00004
ORF7b4L4del1ctTct-59B.1.1.70.000004
ORF7b4L4del1Ctt-tt49B.1.1.70.000004
ORF7b4L4LctTctC68AY.40.000009
ORF7b4L4LctTctG28AY.40.000003
ORF7b4L4delCTT---88AY.430.000035
ORF7b4L4FCttTtt88AY.440.000049
ORF7b4L4FCttTtt88B.1.1.2190.04
ORF7b4L4del2cTTc--68B.1.1.70.000005
ORF7b4L4del2CTt--t28B.1.1.70.000002
ORF7b4L4FCttTtt88B.1.177.40.001688
ORF7b4L4RcTtcGt88P.10.000126
ORF7b4L4VCttGtt77All0.000001
ORF7b4L4del2CTt--t77AY.250.000042
ORF7b4L4delCTT---77B.1.1770.000092
ORF7b4L4FCttTtt77D.20.000525
ORF7b4L4HcTtcAt66All0.000001
ORF7b4L4delCTT---66AY.1030.000037
ORF7b4L4FCttTtt66AY.39.10.000238
ORF7b4L4ICttAtt66AY.40.000009
ORF7b4L4delCTT---66B.1.1.5190.000238
ORF7b4L4FCttTtt66B.1.2210.000426
ORF7b4L4FCttTtt66B.1.5050.026316
ORF7b4L4FCttTtt66B.1.5960.000523
ORF7b4L4FCttTtt55AD.20.001095
ORF7b4L4SCTTTCA25All0
ORF7b4L4SCTtTCt25All0
ORF7b4L4SCTtAGt15All0
ORF7b4L4FCttTtt55AY.1210.000677
ORF7b4L4FCttTtt55AY.200.000194
ORF7b4L4delCTT---55AY.330.000334
ORF7b4L4PcTtcCt55AY.40.000008
ORF7b4L4LctTctC45AY.440.000024
ORF7b4L4LctTctA15AY.440.000006
ORF7b4L4LctTctC55AY.98.10.000242
ORF7b4L4delCTT---55B.1.1.2140.000277
ORF7b4L4FCttTtt55B.1.1.3110.001791
ORF7b4L4ICttAtt55B.1.1.70.000004
ORF7b4L4FCttTtt55B.1.351.30.004382
ORF7b4L4delCTT---55B.1.36.290.002587
ORF7b4L4ICttAtt55B.1.617.20.000019
ORF7b4L4LctTctG45P.10.000063
ORF7b4L4LctTctC15P.10.000016
ORF7b4L4FCttTtt55P.1.100.001347
ORF7b4L4PcTTcCA240.111111
ORF7b4L4SCTTTCA240.111111
ORF7b4L4LctTctA240.111111
ORF7b4L4LCtTTtA240.111111
ORF7b4L4PcTtcCt240.111111
ORF7b4L4SCTtTCt240.111111
ORF7b4L4del2cTTc--44A0.001548
ORF7b4L4FCttTtt44A0.001548
ORF7b4L4LctTctC44AY.1140.000924
ORF7b4L4del2cTTc--24AY.40.000003
ORF7b4L4del2CTt--t24AY.40.000003
ORF7b4L4FCttTtt44AY.420.000161
ORF7b4L4delCTT---44AY.440.000024
ORF7b4L4del2cTTc--44AY.470.000124
ORF7b4L4LctTctC34B.10.000027
ORF7b4L4LctTctG14B.10.000009
ORF7b4L4delCTT---44B.1.1.2840.00043
ORF7b4L4FCttTtt44B.1.1.2940.005063
ORF7b4L4del2cTTc--44B.1.1.3170.001647
ORF7b4L4FCttTtt44B.1.160.120.025641
ORF7b4L4LctTctC34B.1.20.000026
ORF7b4L4LctTctG14B.1.20.000009
ORF7b4L4FCttTtt44B.1.2340.000528
ORF7b4L4FCttTtt44B.1.4000.001716
ORF7b4L4delCTT---44B.1.4290.000094
ORF7b4L4FCttTtt44B.1.6090.001918
ORF7b4L4PcTtcCt44B.1.617.20.000015
ORF7b4L4LctTctG14B.1.617.20.000004
ORF7b4L4LctTctC14B.1.617.20.000004
ORF7b4L4LCtTTtA14B.1.617.20.000004
ORF7b4L4LctTctA14B.1.617.20.000004
ORF7b4L4delCTT---44P.1.140.000191
ORF7b4L4FCttTtt44P.1.140.000191
ORF7b4L4delCTT---44P.1.150.000929
ORF7b4L4ICttAtt33AY.1030.000019
ORF7b4L4LctTctG23AY.4.20.000043
ORF7b4L4LctTctC13AY.4.20.000022
ORF7b4L4ICttAtt33AY.440.000018
ORF7b4L4FCttTtt33AY.470.000093
ORF7b4L4FCttTtt33AY.50.000062
ORF7b4L4delCTT---33AY.650.001599
ORF7b4L4FCttTtt33AY.750.000168
ORF7b4L4FCttTtt33AY.9.10.000251
ORF7b4L4FCttTtt33B.1.1.2140.000166
ORF7b4L4delCTT---33B.1.1.2320.005445
ORF7b4L4del2cTTc--33B.1.1.2430.012245
ORF7b4L4del1ctTct-33B.1.1.3440.032258
ORF7b4L4FCttTtt33B.1.1.370.000579
ORF7b4L4delCTT---33B.1.1.370.000579
ORF7b4L4FCttTtt33B.1.1.3700.037975
ORF7b4L4FCttTtt33B.1.177.210.000229
ORF7b4L4FCttTtt33B.1.177.440.001557
ORF7b4L4delCTT---33B.1.2140.010989
ORF7b4L4FCttTtt33B.1.2410.002435
ORF7b4L4delCTT---33B.1.3510.000089
ORF7b4L4PcTtcCt33B.1.466.20.001174
ORF7b4L4del1ctTct-33B.1.5950.000783
ORF7b4L4delCTT---33B.1.5960.000261
ORF7b4L4ICttAtt33B.1.5960.000261
ORF7b4L4del1cTtc-t23B.1.617.20.000008
ORF7b4L4del1Ctt-tt13B.1.617.20.000004
ORF7b4L4delCTT---33B.1.6260.017143
ORF7b4L4ICttAtt33C.370.000348
ORF7b4L4FCttTtt33P.1.170.000485
ORF7b4L4LctTctC33P.1.70.000958
ORF7b4L4delCTT---33Q.10.000379
ORF7b4L4ICttAtt220.111111
ORF7b4L4FCttTtt220.111111
ORF7b4L4CCTtTGt22All0
ORF7b4L4FCttTtt22AY.1000.000092
ORF7b4L4del1cTtc-t12AY.1030.000006
ORF7b4L4del1ctTct-12AY.1030.000006
ORF7b4L4delCTT---22AY.1080.002205
ORF7b4L4delCTT---22AY.1130.000285
ORF7b4L4del2cTTc--22AY.1180.000125
ORF7b4L4delCTT---22AY.1200.000074
ORF7b4L4delCTT---22AY.200.000078
ORF7b4L4del1CTt-Gt12AY.250.000006
ORF7b4L4del1Ctt-tt12AY.250.000006
ORF7b4L4FCttTtt22AY.270.000129
ORF7b4L4delCTT---22AY.300.000791
ORF7b4L4FCttTtt22AY.34.10.00102
ORF7b4L4FCttTtt22AY.360.000296
ORF7b4L4delCTT---22AY.390.000049
ORF7b4L4delCTT---22AY.4.20.000043
ORF7b4L4FCttTtt22AY.4.30.001684
ORF7b4L4LctTctC22AY.420.00008
ORF7b4L4LctTctC12AY.430.000004
ORF7b4L4LctTctG12AY.430.000004
ORF7b4L4del1Ctt-tt22AY.440.000012
ORF7b4L4FCttTtt22AY.60.000082
ORF7b4L4FCttTtt22AY.75.10.000361
ORF7b4L4FCttTtt22AY.870.001665
ORF7b4L4FCttTtt22AY.980.000158
ORF7b4L4PcTtcCt22B.10.000018
ORF7b4L4del2cTTc--12B.10.000009
ORF7b4L4del1ctTct-12B.10.000009
ORF7b4L4del1Ctt-tt12B.10.000009
ORF7b4L4del2CTt--t12B.10.000009
ORF7b4L4LctTctC22B.1.1.2220.000408
ORF7b4L4FCttTtt22B.1.1.330.000842
ORF7b4L4FCttTtt22B.1.1.3480.001592
ORF7b4L4FCttTtt22B.1.1.3770.002762
ORF7b4L4FCttTtt22B.1.1.4160.00181
ORF7b4L4PcTtcCt22B.1.1.5190.000079
ORF7b4L4FCttTtt22B.1.1.5230.003125
ORF7b4L4RcTtcGt22B.1.1.70.000002
ORF7b4L4PcTtcCt22B.1.1600.000062
ORF7b4L4LctTctG22B.1.177.210.000153
ORF7b4L4delCTT---22B.1.177.600.000437
ORF7b4L4FCttTtt22B.1.177.690.002967
ORF7b4L4PcTtcCt22B.1.20.000018
ORF7b4L4del1CTT-NN12B.1.20.000009
ORF7b4L4del1cTtc-t12B.1.20.000009
ORF7b4L4delCTT---22B.1.2430.000139
ORF7b4L4FCttTtt22B.1.2450.0625
ORF7b4L4FCttTtt22B.1.258.110.000793
ORF7b4L4FCttTtt22B.1.3110.000549
ORF7b4L4HcTtcAt22B.1.3510.000059
ORF7b4L4LctTctA22B.1.3510.000059
ORF7b4L4PcTtcCt22B.1.3510.000059
ORF7b4L4delCTT---22B.1.360.000292
ORF7b4L4FCttTtt22B.1.36.80.002
ORF7b4L4FCttTtt22B.1.3610.002577
ORF7b4L4FCttTtt22B.1.4090.001563
ORF7b4L4FCttTtt22B.1.4270.000101
ORF7b4L4FCttTtt22B.1.4990.002101
ORF7b4L4FCttTtt22B.1.5090.001732
ORF7b4L4FCttTtt22B.1.6210.000177
ORF7b4L4del1CTt-Gt12B.1.6210.000089
ORF7b4L4del1Ctt-tt12B.1.6210.000089
ORF7b4L4FCttTtt22B.1.6250.004706
ORF7b4L4ICttAtt22P.10.000032
ORF7b4L4delCTT---22P.1.10.000635
ORF7b4L4FCttTtt22P.1.120.000968
ORF7b4L4FCttTtt22P.1.70.000639
ORF7b4L4HcTtcAt110.055556
ORF7b4L4NCTtAAt110.055556
ORF7b4L4delCTT---11A0.000387
ORF7b4L4delCTT---11A.10.000282
ORF7b4L4FCttTtt11A.180.05
ORF7b4L4ICttAtt11A.20.000662
ORF7b4L4delCTT---11A.20.000662
ORF7b4L4delCTT---11A.2.20.001689
ORF7b4L4delCTT---11A.230.010526
ORF7b4L4FCttTtt11A.23.10.000704
ORF7b4L4FCttTtt11A.270.001656
ORF7b4L4FCttTtt11A.60.005128
ORF7b4L4NCTtAAt11All0
ORF7b4L4KCTTAAG11All0
ORF7b4L4MCtTAtG11All0
ORF7b4L4TCTtACt11All0
ORF7b4L4FCttTtt11AV.10.005051
ORF7b4L4LctTctC11AY.100.00053
ORF7b4L4delCTT---11AY.1000.000046
ORF7b4L4FCttTtt11AY.1010.00049
ORF7b4L4PcTtcCt11AY.1010.00049
ORF7b4L4TCTtACt11AY.1030.000006
ORF7b4L4del2CTt--t11AY.1030.000006
ORF7b4L4FCttTtt11AY.1130.000142
ORF7b4L4FCttTtt11AY.1170.000085
ORF7b4L4delCTT---11AY.1180.000063
ORF7b4L4delCTT---11AY.1190.000035
ORF7b4L4FCttTtt11AY.1190.000035
ORF7b4L4delCTT---11AY.120.000316
ORF7b4L4LctTctC11AY.1200.000037
ORF7b4L4FCttTtt11AY.1200.000037
ORF7b4L4del1Ctt-tt11AY.1210.000135
ORF7b4L4delCTT---11AY.140.000088
ORF7b4L4PcTtcCt11AY.230.00007
ORF7b4L4FCttTtt11AY.230.00007
ORF7b4L4delCTT---11AY.240.000431
ORF7b4L4ICttAtt11AY.250.000006
ORF7b4L4RcTtcGt11AY.250.000006
ORF7b4L4PcTtcCt11AY.260.000028
ORF7b4L4LctTctG11AY.260.000028
ORF7b4L4FCttTtt11AY.260.000028
ORF7b4L4RcTtcGt11AY.290.000016
ORF7b4L4ICttAtt11AY.30.00001
ORF7b4L4ICttAtt11AY.340.000097
ORF7b4L4PcTtcCt11AY.34.10.00051
ORF7b4L4LctTctC11AY.360.000148
ORF7b4L4FCttTtt11AY.370.000316
ORF7b4L4CCTtTGt11AY.40.000002
ORF7b4L4delCTT---11AY.4.2.10.000149
ORF7b4L4del1Ctt-tt11AY.420.00004
ORF7b4L4RcTtcGt11AY.430.000004
ORF7b4L4PcTtcCt11AY.440.000006
ORF7b4L4RcTtcGt11AY.440.000006
ORF7b4L4PcTtcCt11AY.470.000031
ORF7b4L4ICttAtt11AY.470.000031
ORF7b4L4delCTT---11AY.530.000288
ORF7b4L4delCTT---11AY.600.000938
ORF7b4L4LctTctG11AY.610.000105
ORF7b4L4FCttTtt11AY.640.000595
ORF7b4L4FCttTtt11AY.7.10.000113
ORF7b4L4VCttGtt11AY.7.20.000559
ORF7b4L4PcTtcCt11AY.710.000475
ORF7b4L4CCTtTGt11AY.75.10.00018
ORF7b4L4delCTT---11AY.790.001211
ORF7b4L4FCttTtt11AY.880.000884
ORF7b4L4FCttTtt11AY.90.000068
ORF7b4L4PcTtcCt11AY.9.20.000037
ORF7b4L4HcTtcAt11AY.9.20.000037
ORF7b4L4FCttTtt11AY.98.10.000048
ORF7b4L4delCTT---11AY.98.10.000048
ORF7b4L4LctTctC11AY.99.20.000092
ORF7b4L4FCttTtt11AY.99.20.000092
ORF7b4L4delCTT---11AZ.20.000821
ORF7b4L4delCTT---11AZ.30.00152
ORF7b4L4FCttTtt11B0.000128
ORF7b4L4delCTT---11B0.000128
ORF7b4L4KCTTAAG11B.1.10.000018
ORF7b4L4LctTctG11B.1.10.000018
ORF7b4L4ICttAtt11B.1.10.000018
ORF7b4L4del2CTt--t11B.1.10.000018
ORF7b4L4del1cTtc-t11B.1.10.000018
ORF7b4L4LctTctG11B.1.1.10.000327
ORF7b4L4del1cTtc-t11B.1.1.1010.01
ORF7b4L4HcTtcAt11B.1.1.1530.001095
ORF7b4L4FCttTtt11B.1.1.1630.007634
ORF7b4L4FCttTtt11B.1.1.1700.001247
ORF7b4L4LctTctC11B.1.1.2040.00304
ORF7b4L4ICttAtt11B.1.1.2140.000055
ORF7b4L4delCTT---11B.1.1.2160.00089
ORF7b4L4FCttTtt11B.1.1.2200.001859
ORF7b4L4FCttTtt11B.1.1.2220.000204
ORF7b4L4delCTT---11B.1.1.2310.003096
ORF7b4L4FCttTtt11B.1.1.2650.003155
ORF7b4L4delCTT---11B.1.1.2650.003155
ORF7b4L4delCTT---11B.1.1.280.000311
ORF7b4L4FCttTtt11B.1.1.2970.002237
ORF7b4L4FCttTtt11B.1.1.3010.001179
ORF7b4L4MCtTAtG11B.1.1.3050.003861
ORF7b4L4LctTctC11B.1.1.3260.001761
ORF7b4L4FCttTtt11B.1.1.3490.010309
ORF7b4L4FCttTtt11B.1.1.3720.000689
ORF7b4L4FCttTtt11B.1.1.390.00051
ORF7b4L4delCTT---11B.1.1.4160.000905
ORF7b4L4delCTT---11B.1.1.4340.000349
ORF7b4L4FCttTtt11B.1.1.4400.011765
ORF7b4L4LctTctA11B.1.1.450.014085
ORF7b4L4delCTT---11B.1.1.500.000679
ORF7b4L4FCttTtt11B.1.1.500.000679
ORF7b4L4delCTT---11B.1.1.5250.005464
ORF7b4L4VCttGtt11B.1.1.70.000001
ORF7b4L4delCTT---11B.1.110.30.000718
ORF7b4L4FCttTtt11B.1.110.30.000718
ORF7b4L4FCttTtt11B.1.120.008
ORF7b4L4VCttGtt11B.1.1600.000031
ORF7b4L4RcTtcGt11B.1.1770.000013
ORF7b4L4del1Ctt-tt11B.1.1770.000013
ORF7b4L4LctTctG11B.1.1770.000013
ORF7b4L4ICttAtt11B.1.1770.000013
ORF7b4L4delCTT---11B.1.177.120.000152
ORF7b4L4ICttAtt11B.1.177.120.000152
ORF7b4L4FCttTtt11B.1.177.320.00135
ORF7b4L4delCTT---11B.1.177.420.000894
ORF7b4L4FCttTtt11B.1.177.460.000918
ORF7b4L4delCTT---11B.1.177.500.004695
ORF7b4L4LctTctA11B.1.177.530.002392
ORF7b4L4delCTT---11B.1.177.570.000281
ORF7b4L4FCttTtt11B.1.177.570.000281
ORF7b4L4ICttAtt11B.1.177.600.000218
ORF7b4L4VCttGtt11B.1.177.630.002703
ORF7b4L4VCttGtt11B.1.177.70.000165
ORF7b4L4delCTT---11B.1.177.870.000728
ORF7b4L4HcTtcAt11B.1.20.000009
ORF7b4L4FCttTtt11B.1.2060.000816
ORF7b4L4delCTT---11B.1.2190.009434
ORF7b4L4LctTctC11B.1.2340.000132
ORF7b4L4RcTtcGt11B.1.2360.002053
ORF7b4L4FCttTtt11B.1.2400.000216
ORF7b4L4FCttTtt11B.1.2580.000067
ORF7b4L4PcTtcCt11B.1.2580.000067
ORF7b4L4delCTT---11B.1.2580.000067
ORF7b4L4delCTT---11B.1.258.110.000396
ORF7b4L4FCttTtt11B.1.2650.001271
ORF7b4L4delCTT---11B.1.2650.001271
ORF7b4L4FCttTtt11B.1.2790.000514
ORF7b4L4LctTctC11B.1.3050.002151
ORF7b4L4FCttTtt11B.1.3360.002439
ORF7b4L4RcTtcGt11B.1.3510.00003
ORF7b4L4delCTT---11B.1.351.20.000303
ORF7b4L4delCTT---11B.1.351.30.000876
ORF7b4L4FCttTtt11B.1.351.50.0006
ORF7b4L4RcTtcGt11B.1.360.000146
ORF7b4L4FCttTtt11B.1.36.350.002604
ORF7b4L4FCttTtt11B.1.3690.000285
ORF7b4L4FCttTtt11B.1.3710.001122
ORF7b4L4VCttGtt11B.1.4160.001269
ORF7b4L4FCttTtt11B.1.4280.00102
ORF7b4L4RcTtcGt11B.1.4290.000024
ORF7b4L4VCttGtt11B.1.4290.000024
ORF7b4L4del2cTTc--11B.1.438.10.000107
ORF7b4L4FCttTtt11B.1.438.10.000107
ORF7b4L4delCTT---11B.1.4680.005714
ORF7b4L4delCTT---11B.1.5260.000024
ORF7b4L4del2CTt--t11B.1.5260.000024
ORF7b4L4delCTT---11B.1.5820.000491
ORF7b4L4FCttTtt11B.1.5950.000261
ORF7b4L4del2cTTc--11B.1.6040.017241
ORF7b4L4delCTT---11B.1.617.10.000129
ORF7b4L4del2cTTc--11B.1.617.20.000004
ORF7b4L4FCttTtt11B.1.6200.000946
ORF7b4L4delCTT---11B.1.6210.000089
ORF7b4L4delCTT---11B.1.621.10.000506
ORF7b4L4delCTT---11B.1.6300.005236
ORF7b4L4delCTT---11B.60.00091
ORF7b4L4FCttTtt11C.140.004329
ORF7b4L4LctTctC11C.350.000774
ORF7b4L4delCTT---11C.370.000116
ORF7b4L4LctTctG11C.370.000116
ORF7b4L4FCttTtt11C.390.018868
ORF7b4L4LctTctC11D.20.000075
ORF7b4L4PcTtcCt11D.20.000075
ORF7b4L4delCTT---11N.50.001767
ORF7b4L4SCTtAGt11P.10.000016
ORF7b4L4PcTtcCt11P.10.000016
ORF7b4L4delCTT---11P.1.120.000484
ORF7b4L4FCttTtt11P.1.150.000232
ORF7b4L4delCTT---11P.1.160.000374
ORF7b4L4FCttTtt11P.1.40.000977
ORF7b4L4del2cTTc--11P.1.40.000977
ORF7b4L4delCTT---11P.1.40.000977
ORF7b4L4FCttTtt11Q.10.000126
ORF7b4L4FCttTtt11Q.80.000165
ORF7b4L4delCTT---11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.