CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF7b : CodonNum = 38

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF7b	38	N38N		syn	aaT	aaC	1069	1069	1	27867-27869
ORF7b	38	N38del		del	AAT	---	378	378	1	27867-27869
ORF7b	38	N38S		nonsyn	aAt	aGt	321	319	0.993769	27867-27869
ORF7b	38	N38S		nonsyn	aAT	aGC	321	2	0.00623053	27867-27869
ORF7b	38	N38K		nonsyn	aaT	aaG	282	264	0.93617	27867-27869
ORF7b	38	N38K		nonsyn	aaT	aaA	282	18	0.0638298	27867-27869
ORF7b	38	N38D		nonsyn	Aat	Gat	214	214	1	27867-27869
ORF7b	38	N38I		nonsyn	aAt	aTt	77	73	0.948052	27867-27869
ORF7b	38	N38I		nonsyn	aAT	aTC	77	2	0.025974	27867-27869
ORF7b	38	N38I		nonsyn	aAT	aTA	77	2	0.025974	27867-27869
ORF7b	38	N38Y		nonsyn	Aat	Tat	38	38	1	27867-27869
ORF7b	38	N38T		nonsyn	aAt	aCt	26	19	0.730769	27867-27869
ORF7b	38	N38T		nonsyn	aAT	aCG	26	7	0.269231	27867-27869
ORF7b	38	N38H		nonsyn	Aat	Cat	17	17	1	27867-27869
ORF7b	38	N38G		nonsyn	AAt	GGt	15	11	0.733333	27867-27869
ORF7b	38	N38G		nonsyn	AAT	GGC	15	2	0.133333	27867-27869
ORF7b	38	N38G		nonsyn	AAT	GGA	15	2	0.133333	27867-27869
ORF7b	38	N38R		nonsyn	AAt	CGt	13	6	0.461538	27867-27869
ORF7b	38	N38R		nonsyn	AAT	CGG	13	3	0.230769	27867-27869
ORF7b	38	N38R		nonsyn	aAT	aGA	13	2	0.153846	27867-27869
ORF7b	38	N38R		nonsyn	aAT	aGG	13	2	0.153846	27867-27869
ORF7b	38	N38P		nonsyn	AAt	CCt	10	5	0.5	27867-27869
ORF7b	38	N38P		nonsyn	AAT	CCG	10	5	0.5	27867-27869
ORF7b	38	N38del1		del	aaT	aa-	7	3	0.428571	27867-27869
ORF7b	38	N38del1		del	Aat	-at	7	2	0.285714	27867-27869
ORF7b	38	N38del1		del	AaT	-aC	7	1	0.142857	27867-27869
ORF7b	38	N38del1		del	AaT	Ga-	7	1	0.142857	27867-27869
ORF7b	38	N38Q		nonsyn	AaT	CaG	6	6	1	27867-27869
ORF7b	38	N38V		nonsyn	AAT	GTA	4	2	0.5	27867-27869
ORF7b	38	N38V		nonsyn	AAT	GTC	4	2	0.5	27867-27869
ORF7b	38	N38del2		del	AAt	--t	2	2	1	27867-27869

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF7b	38	N38N	aaT	aaC	1069	1069	All	0.000204
ORF7b	38	N38N	aaT	aaC	611	611	B.1.126	0.779337
ORF7b	38	N38del	AAT	---	378	378	All	0.000072
ORF7b	38	N38S	aAt	aGt	319	321	All	0.000061
ORF7b	38	N38S	aAT	aGC	2	321	All	0
ORF7b	38	N38K	aaT	aaG	264	282	All	0.00005
ORF7b	38	N38K	aaT	aaA	18	282	All	0.000003
ORF7b	38	N38D	Aat	Gat	214	214	All	0.000041
ORF7b	38	N38D	Aat	Gat	181	181	B.1.1.519	0.007188
ORF7b	38	N38K	aaT	aaG	179	179	B.1.617.2	0.000674
ORF7b	38	N38S	aAt	aGt	158	158	AY.4	0.000246
ORF7b	38	N38N	aaT	aaC	127	127	B.1.1.7	0.000114
ORF7b	38	N38I	aAt	aTt	73	77	All	0.000014
ORF7b	38	N38I	aAT	aTA	2	77	All	0
ORF7b	38	N38I	aAT	aTC	2	77	All	0
ORF7b	38	N38del	AAT	---	62	62	AY.4	0.000096
ORF7b	38	N38N	aaT	aaC	59	59	B.1.1.355	0.907692
ORF7b	38	N38del	AAT	---	59	59	B.1.1.7	0.000053
ORF7b	38	N38K	aaT	aaG	57	57	AY.100	0.002622
ORF7b	38	N38S	aAt	aGt	56	56	B.1.1.7	0.00005
ORF7b	38	N38del	AAT	---	49	49	B.1.243	0.00341
ORF7b	38	N38S	aAt	aGt	44	44	AY.103	0.000273
ORF7b	38	N38Y	Aat	Tat	38	38	All	0.000007
ORF7b	38	N38N	aaT	aaC	38	38	AY.4	0.000059
ORF7b	38	N38del	AAT	---	37	37	AY.29	0.000584
ORF7b	38	N38I	aAt	aTt	32	32	B.1.1.403	0.820513
ORF7b	38	N38N	aaT	aaC	31	31	B.1.38	1
ORF7b	38	N38T	aAt	aCt	19	26	All	0.000004
ORF7b	38	N38T	aAT	aCG	7	26	All	0.000001
ORF7b	38	N38N	aaT	aaC	25	25	B.1.177	0.000329
ORF7b	38	N38N	aaT	aaC	23	23	B.1	0.000211
ORF7b	38	N38N	aaT	aaC	20	20	AY.5	0.000413
ORF7b	38	N38H	Aat	Cat	17	17	All	0.000003
ORF7b	38	N38del	AAT	---	17	17	B	0.002173
ORF7b	38	N38G	AAt	GGt	11	15	All	0.000002
ORF7b	38	N38G	AAT	GGC	2	15	All	0
ORF7b	38	N38G	AAT	GGA	2	15	All	0
ORF7b	38	N38D	Aat	Gat	14	14	B.1.1.7	0.000013
ORF7b	38	N38T	aAT	aCG	7	14	P.1	0.00011
ORF7b	38	N38T	aAt	aCt	7	14	P.1	0.00011
ORF7b	38	N38R	AAt	CGt	6	13	All	0.000001
ORF7b	38	N38R	AAT	CGG	3	13	All	0.000001
ORF7b	38	N38R	aAT	aGA	2	13	All	0
ORF7b	38	N38R	aAT	aGG	2	13	All	0
ORF7b	38	N38del	AAT	---	12	12	B.1.2	0.000106
ORF7b	38	N38N	aaT	aaC	12	12	B.1.531	1
ORF7b	38	N38N	aaT	aaC	11	11	AY.44	0.000067
ORF7b	38	N38S	aAt	aGt	11	11	AY.74	0.001272
ORF7b	38	N38N	aaT	aaC	11	11	B.1.1	0.0002
ORF7b	38	N38G	AAt	GGt	11	11	D.2	0.000825
ORF7b	38	N38P	AAT	CCG	5	10	All	0.000001
ORF7b	38	N38P	AAt	CCt	5	10	All	0.000001
ORF7b	38	N38N	aaT	aaC	10	10	B.1.177.10	0.00878
ORF7b	38	N38N	aaT	aaC	10	10	B.1.617.2	0.000038
ORF7b	38	N38K	aaT	aaG	9	10	P.1	0.000142
ORF7b	38	N38K	aaT	aaA	1	10	P.1	0.000016
ORF7b	38	N38Y	Aat	Tat	9	9	AY.4	0.000014
ORF7b	38	N38N	aaT	aaC	9	9	B.1.1.519	0.000357
ORF7b	38	N38S	aAt	aGt	9	9	B.1.617.2	0.000034
ORF7b	38	N38P	AAT	CCG	5	9	P.1	0.000079
ORF7b	38	N38P	AAt	CCt	4	9	P.1	0.000063
ORF7b	38	N38R	AAt	CGt	4	9	P.1	0.000063
ORF7b	38	N38R	AAT	CGG	3	9	P.1	0.000047
ORF7b	38	N38R	aAT	aGG	2	9	P.1	0.000032
ORF7b	38	N38I	aAt	aTt	8	8	AY.4	0.000012
ORF7b	38	N38del	AAT	---	8	8	AY.44	0.000049
ORF7b	38	N38K	aaT	aaG	4	8	B.1.243	0.000278
ORF7b	38	N38K	aaT	aaA	4	8	B.1.243	0.000278
ORF7b	38	N38N	aaT	aaC	8	8	B.1.525	0.000905
ORF7b	38	N38del1	aaT	aa-	3	7	All	0.000001
ORF7b	38	N38del1	Aat	-at	2	7	All	0
ORF7b	38	N38del1	AaT	-aC	1	7	All	0
ORF7b	38	N38del1	AaT	Ga-	1	7	All	0
ORF7b	38	N38del	AAT	---	7	7	AY.103	0.000043
ORF7b	38	N38I	aAt	aTt	7	7	B.1.1	0.000127
ORF7b	38	N38del	AAT	---	7	7	B.1.1.265	0.022082
ORF7b	38	N38H	Aat	Cat	7	7	P.1	0.00011
ORF7b	38	N38Q	AaT	CaG	6	6	All	0.000001
ORF7b	38	N38N	aaT	aaC	6	6	AY.20	0.000233
ORF7b	38	N38del	AAT	---	6	6	AY.29.1	0.001323
ORF7b	38	N38N	aaT	aaC	6	6	AY.43	0.000027
ORF7b	38	N38del	AAT	---	6	6	AY.43	0.000027
ORF7b	38	N38I	aAt	aTt	6	6	B.1.1.7	0.000005
ORF7b	38	N38del	AAT	---	6	6	B.1.617.2	0.000023
ORF7b	38	N38I	aAt	aTt	6	6	P.1	0.000095
ORF7b	38	N38Q	AaT	CaG	6	6	P.1	0.000095
ORF7b	38	N38N	aaT	aaC	5	5	AY.6	0.000206
ORF7b	38	N38del	AAT	---	5	5	B.1.1	0.000091
ORF7b	38	N38D	Aat	Gat	5	5	B.1.1.317	0.002058
ORF7b	38	N38del	AAT	---	5	5	B.1.1.519	0.000199
ORF7b	38	N38del	AAT	---	5	5	B.1.526	0.000118
ORF7b	38	N38del	AAT	---	4	4		0.222222
ORF7b	38	N38G	AAT	GGA	2	4		0.111111
ORF7b	38	N38I	aAT	aTC	2	4		0.111111
ORF7b	38	N38G	AAT	GGC	2	4		0.111111
ORF7b	38	N38V	AAT	GTC	2	4		0.111111
ORF7b	38	N38I	aAT	aTA	2	4		0.111111
ORF7b	38	N38V	AAT	GTA	2	4		0.111111
ORF7b	38	N38V	AAT	GTA	2	4	All	0
ORF7b	38	N38V	AAT	GTC	2	4	All	0
ORF7b	38	N38Y	Aat	Tat	4	4	AY.27	0.000259
ORF7b	38	N38del	AAT	---	4	4	AY.3	0.00004
ORF7b	38	N38del	AAT	---	4	4	B.1.1.214	0.000222
ORF7b	38	N38T	aAt	aCt	4	4	B.1.1.519	0.000159
ORF7b	38	N38S	aAt	aGt	4	4	B.1.177	0.000053
ORF7b	38	N38N	aaT	aaC	4	4	B.1.2	0.000035
ORF7b	38	N38S	aAt	aGt	4	4	P.1	0.000063
ORF7b	38	N38del	AAT	---	3	3	AY.25	0.000018
ORF7b	38	N38del	AAT	---	3	3	AY.39	0.000074
ORF7b	38	N38N	aaT	aaC	3	3	AY.46	0.000312
ORF7b	38	N38del	AAT	---	3	3	AY.48	0.001395
ORF7b	38	N38S	aAt	aGt	3	3	AY.63	0.001161
ORF7b	38	N38K	aaT	aaG	3	3	AY.98	0.000237
ORF7b	38	N38H	Aat	Cat	3	3	B.1	0.000027
ORF7b	38	N38Y	Aat	Tat	3	3	B.1	0.000027
ORF7b	38	N38del	AAT	---	3	3	B.1	0.000027
ORF7b	38	N38Y	Aat	Tat	3	3	B.1.1	0.000054
ORF7b	38	N38K	aaT	aaA	2	3	B.1.1.7	0.000002
ORF7b	38	N38K	aaT	aaG	1	3	B.1.1.7	0.000001
ORF7b	38	N38D	Aat	Gat	3	3	B.1.2	0.000026
ORF7b	38	N38S	aAt	aGt	3	3	B.1.243	0.000209
ORF7b	38	N38Y	Aat	Tat	3	3	B.1.36.38	0.004926
ORF7b	38	N38K	aaT	aaG	3	3	B.1.9.5	0.017045
ORF7b	38	N38del	AAT	---	3	3	P.1.15	0.000697
ORF7b	38	N38R	aAT	aGA	2	2		0.111111
ORF7b	38	N38S	aAT	aGC	2	2		0.111111
ORF7b	38	N38Y	Aat	Tat	2	2		0.111111
ORF7b	38	N38del	AAT	---	2	2	A.2.2	0.003378
ORF7b	38	N38N	aaT	aaC	2	2	A.29	0.010638
ORF7b	38	N38del	AAT	---	2	2	AD.2	0.000438
ORF7b	38	N38del2	AAt	--t	2	2	All	0
ORF7b	38	N38N	aaT	aaC	2	2	AY.103	0.000012
ORF7b	38	N38del	AAT	---	2	2	AY.118	0.000125
ORF7b	38	N38I	aAt	aTt	2	2	AY.119	0.000071
ORF7b	38	N38N	aaT	aaC	2	2	AY.23	0.000139
ORF7b	38	N38T	aAt	aCt	2	2	AY.25	0.000012
ORF7b	38	N38S	aAt	aGt	2	2	AY.25	0.000012
ORF7b	38	N38del	AAT	---	2	2	AY.30	0.000791
ORF7b	38	N38S	aAt	aGt	2	2	AY.30	0.000791
ORF7b	38	N38I	aAt	aTt	2	2	AY.4.2	0.000043
ORF7b	38	N38del	AAT	---	2	2	AY.4.2	0.000043
ORF7b	38	N38S	aAt	aGt	2	2	AY.43	0.000009
ORF7b	38	N38S	aAt	aGt	2	2	AY.44	0.000012
ORF7b	38	N38I	aAt	aTt	2	2	AY.45	0.000243
ORF7b	38	N38del	AAT	---	2	2	AY.47	0.000062
ORF7b	38	N38del	AAT	---	2	2	AY.85	0.000854
ORF7b	38	N38N	aaT	aaC	2	2	AY.85	0.000854
ORF7b	38	N38K	aaT	aaA	1	2	B.1.1	0.000018
ORF7b	38	N38K	aaT	aaG	1	2	B.1.1	0.000018
ORF7b	38	N38del	AAT	---	2	2	B.1.1.25	0.001137
ORF7b	38	N38N	aaT	aaC	2	2	B.1.1.318	0.000604
ORF7b	38	N38K	aaT	aaA	2	2	B.1.1.33	0.000842
ORF7b	38	N38Y	Aat	Tat	2	2	B.1.1.7	0.000002
ORF7b	38	N38Y	Aat	Tat	2	2	B.1.160	0.000062
ORF7b	38	N38del	AAT	---	2	2	B.1.177	0.000026
ORF7b	38	N38N	aaT	aaC	2	2	B.1.234	0.000264
ORF7b	38	N38N	aaT	aaC	2	2	B.1.258	0.000133
ORF7b	38	N38T	aAt	aCt	2	2	B.1.258.14	0.001961
ORF7b	38	N38N	aaT	aaC	2	2	B.1.351	0.000059
ORF7b	38	N38del	AAT	---	2	2	B.1.36	0.000292
ORF7b	38	N38N	aaT	aaC	2	2	B.1.427	0.000101
ORF7b	38	N38del	AAT	---	2	2	B.1.427	0.000101
ORF7b	38	N38N	aaT	aaC	2	2	B.1.466.2	0.000782
ORF7b	38	N38D	Aat	Gat	2	2	B.1.526	0.000047
ORF7b	38	N38del	AAT	---	2	2	B.1.582	0.000981
ORF7b	38	N38N	aaT	aaC	2	2	B.1.596	0.000174
ORF7b	38	N38Y	Aat	Tat	2	2	B.1.617.2	0.000008
ORF7b	38	N38D	Aat	Gat	2	2	P.1	0.000032
ORF7b	38	N38N	aaT	aaC	2	2	P.1	0.000032
ORF7b	38	N38del	AAT	---	2	2	P.1.1	0.000635
ORF7b	38	N38S	aAt	aGt	2	2	P.1.14	0.000096
ORF7b	38	N38K	aaT	aaA	2	2	P.1.16	0.000748
ORF7b	38	N38del	AAT	---	1	1	A.1	0.000282
ORF7b	38	N38D	Aat	Gat	1	1	A.2.4	0.003367
ORF7b	38	N38del	AAT	---	1	1	A.23.1	0.000704
ORF7b	38	N38del	AAT	---	1	1	AY.102	0.000027
ORF7b	38	N38N	aaT	aaC	1	1	AY.105	0.000643
ORF7b	38	N38del	AAT	---	1	1	AY.108	0.001103
ORF7b	38	N38S	aAt	aGt	1	1	AY.110	0.000113
ORF7b	38	N38D	Aat	Gat	1	1	AY.118	0.000063
ORF7b	38	N38D	Aat	Gat	1	1	AY.119	0.000035
ORF7b	38	N38Y	Aat	Tat	1	1	AY.120.1	0.000321
ORF7b	38	N38del	AAT	---	1	1	AY.121	0.000135
ORF7b	38	N38K	aaT	aaA	1	1	AY.25	0.000006
ORF7b	38	N38del	AAT	---	1	1	AY.26	0.000028
ORF7b	38	N38Y	Aat	Tat	1	1	AY.26	0.000028
ORF7b	38	N38D	Aat	Gat	1	1	AY.3	0.00001
ORF7b	38	N38I	aAt	aTt	1	1	AY.3	0.00001
ORF7b	38	N38K	aaT	aaG	1	1	AY.3	0.00001
ORF7b	38	N38del	AAT	---	1	1	AY.39.1	0.00004
ORF7b	38	N38K	aaT	aaG	1	1	AY.4	0.000002
ORF7b	38	N38H	Aat	Cat	1	1	AY.4	0.000002
ORF7b	38	N38del	AAT	---	1	1	AY.4.5	0.000107
ORF7b	38	N38H	Aat	Cat	1	1	AY.40	0.000964
ORF7b	38	N38del1	AaT	Ga-	1	1	AY.43	0.000004
ORF7b	38	N38I	aAt	aTt	1	1	AY.43	0.000004
ORF7b	38	N38K	aaT	aaG	1	1	AY.44	0.000006
ORF7b	38	N38del1	AaT	-aC	1	1	AY.44	0.000006
ORF7b	38	N38N	aaT	aaC	1	1	AY.45	0.000122
ORF7b	38	N38H	Aat	Cat	1	1	AY.46.6	0.000072
ORF7b	38	N38S	aAt	aGt	1	1	AY.5.4	0.000277
ORF7b	38	N38del	AAT	---	1	1	AY.55	0.000917
ORF7b	38	N38del	AAT	---	1	1	AY.58	0.000907
ORF7b	38	N38Y	Aat	Tat	1	1	AY.61	0.000105
ORF7b	38	N38K	aaT	aaA	1	1	AY.66	0.00107
ORF7b	38	N38del	AAT	---	1	1	AY.67	0.000464
ORF7b	38	N38del	AAT	---	1	1	AY.71	0.000475
ORF7b	38	N38del	AAT	---	1	1	AY.75	0.000056
ORF7b	38	N38K	aaT	aaG	1	1	AY.75.1	0.00018
ORF7b	38	N38del	AAT	---	1	1	AY.84	0.000437
ORF7b	38	N38del	AAT	---	1	1	AY.99	0.001049
ORF7b	38	N38K	aaT	aaG	1	1	B.1	0.000009
ORF7b	38	N38D	Aat	Gat	1	1	B.1	0.000009
ORF7b	38	N38del1	Aat	-at	1	1	B.1	0.000009
ORF7b	38	N38del1	aaT	aa-	1	1	B.1.1	0.000018
ORF7b	38	N38P	AAt	CCt	1	1	B.1.1	0.000018
ORF7b	38	N38D	Aat	Gat	1	1	B.1.1.1	0.000327
ORF7b	38	N38del	AAT	---	1	1	B.1.1.216	0.00089
ORF7b	38	N38H	Aat	Cat	1	1	B.1.1.222	0.000204
ORF7b	38	N38T	aAt	aCt	1	1	B.1.1.222	0.000204
ORF7b	38	N38Y	Aat	Tat	1	1	B.1.1.282	0.011628
ORF7b	38	N38del	AAT	---	1	1	B.1.1.284	0.000107
ORF7b	38	N38del	AAT	---	1	1	B.1.1.306	0.000438
ORF7b	38	N38S	aAt	aGt	1	1	B.1.1.33	0.000421
ORF7b	38	N38H	Aat	Cat	1	1	B.1.1.33	0.000421
ORF7b	38	N38R	AAt	CGt	1	1	B.1.1.33	0.000421
ORF7b	38	N38Y	Aat	Tat	1	1	B.1.1.397	0.002252
ORF7b	38	N38del	AAT	---	1	1	B.1.1.44	0.00241
ORF7b	38	N38T	aAt	aCt	1	1	B.1.1.7	0.000001
ORF7b	38	N38N	aaT	aaC	1	1	B.1.104	0.00369
ORF7b	38	N38N	aaT	aaC	1	1	B.1.110.3	0.000718
ORF7b	38	N38N	aaT	aaC	1	1	B.1.160.26	0.002421
ORF7b	38	N38K	aaT	aaA	1	1	B.1.177	0.000013
ORF7b	38	N38del	AAT	---	1	1	B.1.177.15	0.000631
ORF7b	38	N38N	aaT	aaC	1	1	B.1.177.17	0.000821
ORF7b	38	N38K	aaT	aaA	1	1	B.1.177.21	0.000076
ORF7b	38	N38S	aAt	aGt	1	1	B.1.177.57	0.000281
ORF7b	38	N38del2	AAt	--t	1	1	B.1.177.63	0.002703
ORF7b	38	N38del	AAT	---	1	1	B.1.177.7	0.000165
ORF7b	38	N38N	aaT	aaC	1	1	B.1.177.82	0.000477
ORF7b	38	N38del	AAT	---	1	1	B.1.177.83	0.001481
ORF7b	38	N38del	AAT	---	1	1	B.1.195	0.005025
ORF7b	38	N38S	aAt	aGt	1	1	B.1.2	0.000009
ORF7b	38	N38del1	Aat	-at	1	1	B.1.2	0.000009
ORF7b	38	N38K	aaT	aaG	1	1	B.1.2	0.000009
ORF7b	38	N38S	aAt	aGt	1	1	B.1.210	0.002132
ORF7b	38	N38del	AAT	---	1	1	B.1.234	0.000132
ORF7b	38	N38N	aaT	aaC	1	1	B.1.243	0.00007
ORF7b	38	N38del1	aaT	aa-	1	1	B.1.243	0.00007
ORF7b	38	N38I	aAt	aTt	1	1	B.1.258	0.000067
ORF7b	38	N38del	AAT	---	1	1	B.1.258	0.000067
ORF7b	38	N38N	aaT	aaC	1	1	B.1.333	0.010526
ORF7b	38	N38S	aAt	aGt	1	1	B.1.351	0.00003
ORF7b	38	N38Y	Aat	Tat	1	1	B.1.351	0.00003
ORF7b	38	N38N	aaT	aaC	1	1	B.1.36.1	0.00114
ORF7b	38	N38N	aaT	aaC	1	1	B.1.36.29	0.000517
ORF7b	38	N38T	aAt	aCt	1	1	B.1.36.8	0.001
ORF7b	38	N38del	AAT	---	1	1	B.1.369	0.000285
ORF7b	38	N38N	aaT	aaC	1	1	B.1.399	0.001934
ORF7b	38	N38S	aAt	aGt	1	1	B.1.40	0.019608
ORF7b	38	N38del	AAT	---	1	1	B.1.400	0.000429
ORF7b	38	N38S	aAt	aGt	1	1	B.1.416	0.001269
ORF7b	38	N38K	aaT	aaG	1	1	B.1.427	0.00005
ORF7b	38	N38del1	aaT	aa-	1	1	B.1.427	0.00005
ORF7b	38	N38del	AAT	---	1	1	B.1.429	0.000024
ORF7b	38	N38N	aaT	aaC	1	1	B.1.429	0.000024
ORF7b	38	N38I	aAt	aTt	1	1	B.1.429	0.000024
ORF7b	38	N38K	aaT	aaA	1	1	B.1.438.1	0.000107
ORF7b	38	N38Y	Aat	Tat	1	1	B.1.438.4	0.021277
ORF7b	38	N38S	aAt	aGt	1	1	B.1.441	0.009615
ORF7b	38	N38del	AAT	---	1	1	B.1.468	0.005714
ORF7b	38	N38S	aAt	aGt	1	1	B.1.497	0.000315
ORF7b	38	N38del	AAT	---	1	1	B.1.499	0.00105
ORF7b	38	N38S	aAt	aGt	1	1	B.1.499	0.00105
ORF7b	38	N38N	aaT	aaC	1	1	B.1.526	0.000024
ORF7b	38	N38D	Aat	Gat	1	1	B.1.556	0.007519
ORF7b	38	N38N	aaT	aaC	1	1	B.1.561	0.000397
ORF7b	38	N38N	aaT	aaC	1	1	B.1.580	0.004065
ORF7b	38	N38I	aAt	aTt	1	1	B.1.596	0.000087
ORF7b	38	N38S	aAt	aGt	1	1	B.1.617.1	0.000129
ORF7b	38	N38I	aAt	aTt	1	1	B.1.617.2	0.000004
ORF7b	38	N38del	AAT	---	1	1	B.1.630	0.005236
ORF7b	38	N38K	aaT	aaA	1	1	B.1.637	0.000073
ORF7b	38	N38del	AAT	---	1	1	C.26	0.007353
ORF7b	38	N38S	aAt	aGt	1	1	C.36	0.000911
ORF7b	38	N38del	AAT	---	1	1	C.37	0.000116
ORF7b	38	N38I	aAt	aTt	1	1	C.37	0.000116
ORF7b	38	N38T	aAt	aCt	1	1	D.2	0.000075
ORF7b	38	N38Y	Aat	Tat	1	1	P.1	0.000016
ORF7b	38	N38del	AAT	---	1	1	P.1.14	0.000048
ORF7b	38	N38del2	AAt	--t	1	1	P.1.14	0.000048
ORF7b	38	N38H	Aat	Cat	1	1	P.1.2	0.001156
ORF7b	38	N38R	AAt	CGt	1	1	P.2	0.000187
ORF7b	38	N38I	aAt	aTt	1	1	P.2	0.000187
ORF7b	38	N38S	aAt	aGt	1	1	P.2	0.000187
ORF7b	38	N38H	Aat	Cat	1	1	P.2	0.000187
ORF7b	38	N38S	aAt	aGt	1	1	Q.3	0.000145
ORF7b	38	N38S	aAt	aGt	1	1	Q.8	0.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.