CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7b | 38 | N38N | syn | aaT | aaC | 1069 | 1069 | 1 | 27867-27869 | |
ORF7b | 38 | N38del | del | AAT | --- | 378 | 378 | 1 | 27867-27869 | |
ORF7b | 38 | N38S | nonsyn | aAt | aGt | 321 | 319 | 0.993769 | 27867-27869 | |
ORF7b | 38 | N38S | nonsyn | aAT | aGC | 321 | 2 | 0.00623053 | 27867-27869 | |
ORF7b | 38 | N38K | nonsyn | aaT | aaG | 282 | 264 | 0.93617 | 27867-27869 | |
ORF7b | 38 | N38K | nonsyn | aaT | aaA | 282 | 18 | 0.0638298 | 27867-27869 | |
ORF7b | 38 | N38D | nonsyn | Aat | Gat | 214 | 214 | 1 | 27867-27869 | |
ORF7b | 38 | N38I | nonsyn | aAt | aTt | 77 | 73 | 0.948052 | 27867-27869 | |
ORF7b | 38 | N38I | nonsyn | aAT | aTC | 77 | 2 | 0.025974 | 27867-27869 | |
ORF7b | 38 | N38I | nonsyn | aAT | aTA | 77 | 2 | 0.025974 | 27867-27869 | |
ORF7b | 38 | N38Y | nonsyn | Aat | Tat | 38 | 38 | 1 | 27867-27869 | |
ORF7b | 38 | N38T | nonsyn | aAt | aCt | 26 | 19 | 0.730769 | 27867-27869 | |
ORF7b | 38 | N38T | nonsyn | aAT | aCG | 26 | 7 | 0.269231 | 27867-27869 | |
ORF7b | 38 | N38H | nonsyn | Aat | Cat | 17 | 17 | 1 | 27867-27869 | |
ORF7b | 38 | N38G | nonsyn | AAt | GGt | 15 | 11 | 0.733333 | 27867-27869 | |
ORF7b | 38 | N38G | nonsyn | AAT | GGC | 15 | 2 | 0.133333 | 27867-27869 | |
ORF7b | 38 | N38G | nonsyn | AAT | GGA | 15 | 2 | 0.133333 | 27867-27869 | |
ORF7b | 38 | N38R | nonsyn | AAt | CGt | 13 | 6 | 0.461538 | 27867-27869 | |
ORF7b | 38 | N38R | nonsyn | AAT | CGG | 13 | 3 | 0.230769 | 27867-27869 | |
ORF7b | 38 | N38R | nonsyn | aAT | aGA | 13 | 2 | 0.153846 | 27867-27869 | |
ORF7b | 38 | N38R | nonsyn | aAT | aGG | 13 | 2 | 0.153846 | 27867-27869 | |
ORF7b | 38 | N38P | nonsyn | AAt | CCt | 10 | 5 | 0.5 | 27867-27869 | |
ORF7b | 38 | N38P | nonsyn | AAT | CCG | 10 | 5 | 0.5 | 27867-27869 | |
ORF7b | 38 | N38del1 | del | aaT | aa- | 7 | 3 | 0.428571 | 27867-27869 | |
ORF7b | 38 | N38del1 | del | Aat | -at | 7 | 2 | 0.285714 | 27867-27869 | |
ORF7b | 38 | N38del1 | del | AaT | -aC | 7 | 1 | 0.142857 | 27867-27869 | |
ORF7b | 38 | N38del1 | del | AaT | Ga- | 7 | 1 | 0.142857 | 27867-27869 | |
ORF7b | 38 | N38Q | nonsyn | AaT | CaG | 6 | 6 | 1 | 27867-27869 | |
ORF7b | 38 | N38V | nonsyn | AAT | GTA | 4 | 2 | 0.5 | 27867-27869 | |
ORF7b | 38 | N38V | nonsyn | AAT | GTC | 4 | 2 | 0.5 | 27867-27869 | |
ORF7b | 38 | N38del2 | del | AAt | --t | 2 | 2 | 1 | 27867-27869 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7b | 38 | N38N | aaT | aaC | 1069 | 1069 | All | 0.000204 |
ORF7b | 38 | N38N | aaT | aaC | 611 | 611 | B.1.126 | 0.779337 |
ORF7b | 38 | N38del | AAT | --- | 378 | 378 | All | 0.000072 |
ORF7b | 38 | N38S | aAt | aGt | 319 | 321 | All | 0.000061 |
ORF7b | 38 | N38S | aAT | aGC | 2 | 321 | All | 0 |
ORF7b | 38 | N38K | aaT | aaG | 264 | 282 | All | 0.00005 |
ORF7b | 38 | N38K | aaT | aaA | 18 | 282 | All | 0.000003 |
ORF7b | 38 | N38D | Aat | Gat | 214 | 214 | All | 0.000041 |
ORF7b | 38 | N38D | Aat | Gat | 181 | 181 | B.1.1.519 | 0.007188 |
ORF7b | 38 | N38K | aaT | aaG | 179 | 179 | B.1.617.2 | 0.000674 |
ORF7b | 38 | N38S | aAt | aGt | 158 | 158 | AY.4 | 0.000246 |
ORF7b | 38 | N38N | aaT | aaC | 127 | 127 | B.1.1.7 | 0.000114 |
ORF7b | 38 | N38I | aAt | aTt | 73 | 77 | All | 0.000014 |
ORF7b | 38 | N38I | aAT | aTA | 2 | 77 | All | 0 |
ORF7b | 38 | N38I | aAT | aTC | 2 | 77 | All | 0 |
ORF7b | 38 | N38del | AAT | --- | 62 | 62 | AY.4 | 0.000096 |
ORF7b | 38 | N38N | aaT | aaC | 59 | 59 | B.1.1.355 | 0.907692 |
ORF7b | 38 | N38del | AAT | --- | 59 | 59 | B.1.1.7 | 0.000053 |
ORF7b | 38 | N38K | aaT | aaG | 57 | 57 | AY.100 | 0.002622 |
ORF7b | 38 | N38S | aAt | aGt | 56 | 56 | B.1.1.7 | 0.00005 |
ORF7b | 38 | N38del | AAT | --- | 49 | 49 | B.1.243 | 0.00341 |
ORF7b | 38 | N38S | aAt | aGt | 44 | 44 | AY.103 | 0.000273 |
ORF7b | 38 | N38Y | Aat | Tat | 38 | 38 | All | 0.000007 |
ORF7b | 38 | N38N | aaT | aaC | 38 | 38 | AY.4 | 0.000059 |
ORF7b | 38 | N38del | AAT | --- | 37 | 37 | AY.29 | 0.000584 |
ORF7b | 38 | N38I | aAt | aTt | 32 | 32 | B.1.1.403 | 0.820513 |
ORF7b | 38 | N38N | aaT | aaC | 31 | 31 | B.1.38 | 1 |
ORF7b | 38 | N38T | aAt | aCt | 19 | 26 | All | 0.000004 |
ORF7b | 38 | N38T | aAT | aCG | 7 | 26 | All | 0.000001 |
ORF7b | 38 | N38N | aaT | aaC | 25 | 25 | B.1.177 | 0.000329 |
ORF7b | 38 | N38N | aaT | aaC | 23 | 23 | B.1 | 0.000211 |
ORF7b | 38 | N38N | aaT | aaC | 20 | 20 | AY.5 | 0.000413 |
ORF7b | 38 | N38H | Aat | Cat | 17 | 17 | All | 0.000003 |
ORF7b | 38 | N38del | AAT | --- | 17 | 17 | B | 0.002173 |
ORF7b | 38 | N38G | AAt | GGt | 11 | 15 | All | 0.000002 |
ORF7b | 38 | N38G | AAT | GGC | 2 | 15 | All | 0 |
ORF7b | 38 | N38G | AAT | GGA | 2 | 15 | All | 0 |
ORF7b | 38 | N38D | Aat | Gat | 14 | 14 | B.1.1.7 | 0.000013 |
ORF7b | 38 | N38T | aAT | aCG | 7 | 14 | P.1 | 0.00011 |
ORF7b | 38 | N38T | aAt | aCt | 7 | 14 | P.1 | 0.00011 |
ORF7b | 38 | N38R | AAt | CGt | 6 | 13 | All | 0.000001 |
ORF7b | 38 | N38R | AAT | CGG | 3 | 13 | All | 0.000001 |
ORF7b | 38 | N38R | aAT | aGA | 2 | 13 | All | 0 |
ORF7b | 38 | N38R | aAT | aGG | 2 | 13 | All | 0 |
ORF7b | 38 | N38del | AAT | --- | 12 | 12 | B.1.2 | 0.000106 |
ORF7b | 38 | N38N | aaT | aaC | 12 | 12 | B.1.531 | 1 |
ORF7b | 38 | N38N | aaT | aaC | 11 | 11 | AY.44 | 0.000067 |
ORF7b | 38 | N38S | aAt | aGt | 11 | 11 | AY.74 | 0.001272 |
ORF7b | 38 | N38N | aaT | aaC | 11 | 11 | B.1.1 | 0.0002 |
ORF7b | 38 | N38G | AAt | GGt | 11 | 11 | D.2 | 0.000825 |
ORF7b | 38 | N38P | AAT | CCG | 5 | 10 | All | 0.000001 |
ORF7b | 38 | N38P | AAt | CCt | 5 | 10 | All | 0.000001 |
ORF7b | 38 | N38N | aaT | aaC | 10 | 10 | B.1.177.10 | 0.00878 |
ORF7b | 38 | N38N | aaT | aaC | 10 | 10 | B.1.617.2 | 0.000038 |
ORF7b | 38 | N38K | aaT | aaG | 9 | 10 | P.1 | 0.000142 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 10 | P.1 | 0.000016 |
ORF7b | 38 | N38Y | Aat | Tat | 9 | 9 | AY.4 | 0.000014 |
ORF7b | 38 | N38N | aaT | aaC | 9 | 9 | B.1.1.519 | 0.000357 |
ORF7b | 38 | N38S | aAt | aGt | 9 | 9 | B.1.617.2 | 0.000034 |
ORF7b | 38 | N38P | AAT | CCG | 5 | 9 | P.1 | 0.000079 |
ORF7b | 38 | N38P | AAt | CCt | 4 | 9 | P.1 | 0.000063 |
ORF7b | 38 | N38R | AAt | CGt | 4 | 9 | P.1 | 0.000063 |
ORF7b | 38 | N38R | AAT | CGG | 3 | 9 | P.1 | 0.000047 |
ORF7b | 38 | N38R | aAT | aGG | 2 | 9 | P.1 | 0.000032 |
ORF7b | 38 | N38I | aAt | aTt | 8 | 8 | AY.4 | 0.000012 |
ORF7b | 38 | N38del | AAT | --- | 8 | 8 | AY.44 | 0.000049 |
ORF7b | 38 | N38K | aaT | aaG | 4 | 8 | B.1.243 | 0.000278 |
ORF7b | 38 | N38K | aaT | aaA | 4 | 8 | B.1.243 | 0.000278 |
ORF7b | 38 | N38N | aaT | aaC | 8 | 8 | B.1.525 | 0.000905 |
ORF7b | 38 | N38del1 | aaT | aa- | 3 | 7 | All | 0.000001 |
ORF7b | 38 | N38del1 | Aat | -at | 2 | 7 | All | 0 |
ORF7b | 38 | N38del1 | AaT | -aC | 1 | 7 | All | 0 |
ORF7b | 38 | N38del1 | AaT | Ga- | 1 | 7 | All | 0 |
ORF7b | 38 | N38del | AAT | --- | 7 | 7 | AY.103 | 0.000043 |
ORF7b | 38 | N38I | aAt | aTt | 7 | 7 | B.1.1 | 0.000127 |
ORF7b | 38 | N38del | AAT | --- | 7 | 7 | B.1.1.265 | 0.022082 |
ORF7b | 38 | N38H | Aat | Cat | 7 | 7 | P.1 | 0.00011 |
ORF7b | 38 | N38Q | AaT | CaG | 6 | 6 | All | 0.000001 |
ORF7b | 38 | N38N | aaT | aaC | 6 | 6 | AY.20 | 0.000233 |
ORF7b | 38 | N38del | AAT | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF7b | 38 | N38N | aaT | aaC | 6 | 6 | AY.43 | 0.000027 |
ORF7b | 38 | N38del | AAT | --- | 6 | 6 | AY.43 | 0.000027 |
ORF7b | 38 | N38I | aAt | aTt | 6 | 6 | B.1.1.7 | 0.000005 |
ORF7b | 38 | N38del | AAT | --- | 6 | 6 | B.1.617.2 | 0.000023 |
ORF7b | 38 | N38I | aAt | aTt | 6 | 6 | P.1 | 0.000095 |
ORF7b | 38 | N38Q | AaT | CaG | 6 | 6 | P.1 | 0.000095 |
ORF7b | 38 | N38N | aaT | aaC | 5 | 5 | AY.6 | 0.000206 |
ORF7b | 38 | N38del | AAT | --- | 5 | 5 | B.1.1 | 0.000091 |
ORF7b | 38 | N38D | Aat | Gat | 5 | 5 | B.1.1.317 | 0.002058 |
ORF7b | 38 | N38del | AAT | --- | 5 | 5 | B.1.1.519 | 0.000199 |
ORF7b | 38 | N38del | AAT | --- | 5 | 5 | B.1.526 | 0.000118 |
ORF7b | 38 | N38del | AAT | --- | 4 | 4 | 0.222222 | |
ORF7b | 38 | N38G | AAT | GGA | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38I | aAT | aTC | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38G | AAT | GGC | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38V | AAT | GTC | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38I | aAT | aTA | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38V | AAT | GTA | 2 | 4 | 0.111111 | |
ORF7b | 38 | N38V | AAT | GTA | 2 | 4 | All | 0 |
ORF7b | 38 | N38V | AAT | GTC | 2 | 4 | All | 0 |
ORF7b | 38 | N38Y | Aat | Tat | 4 | 4 | AY.27 | 0.000259 |
ORF7b | 38 | N38del | AAT | --- | 4 | 4 | AY.3 | 0.00004 |
ORF7b | 38 | N38del | AAT | --- | 4 | 4 | B.1.1.214 | 0.000222 |
ORF7b | 38 | N38T | aAt | aCt | 4 | 4 | B.1.1.519 | 0.000159 |
ORF7b | 38 | N38S | aAt | aGt | 4 | 4 | B.1.177 | 0.000053 |
ORF7b | 38 | N38N | aaT | aaC | 4 | 4 | B.1.2 | 0.000035 |
ORF7b | 38 | N38S | aAt | aGt | 4 | 4 | P.1 | 0.000063 |
ORF7b | 38 | N38del | AAT | --- | 3 | 3 | AY.25 | 0.000018 |
ORF7b | 38 | N38del | AAT | --- | 3 | 3 | AY.39 | 0.000074 |
ORF7b | 38 | N38N | aaT | aaC | 3 | 3 | AY.46 | 0.000312 |
ORF7b | 38 | N38del | AAT | --- | 3 | 3 | AY.48 | 0.001395 |
ORF7b | 38 | N38S | aAt | aGt | 3 | 3 | AY.63 | 0.001161 |
ORF7b | 38 | N38K | aaT | aaG | 3 | 3 | AY.98 | 0.000237 |
ORF7b | 38 | N38H | Aat | Cat | 3 | 3 | B.1 | 0.000027 |
ORF7b | 38 | N38Y | Aat | Tat | 3 | 3 | B.1 | 0.000027 |
ORF7b | 38 | N38del | AAT | --- | 3 | 3 | B.1 | 0.000027 |
ORF7b | 38 | N38Y | Aat | Tat | 3 | 3 | B.1.1 | 0.000054 |
ORF7b | 38 | N38K | aaT | aaA | 2 | 3 | B.1.1.7 | 0.000002 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 3 | B.1.1.7 | 0.000001 |
ORF7b | 38 | N38D | Aat | Gat | 3 | 3 | B.1.2 | 0.000026 |
ORF7b | 38 | N38S | aAt | aGt | 3 | 3 | B.1.243 | 0.000209 |
ORF7b | 38 | N38Y | Aat | Tat | 3 | 3 | B.1.36.38 | 0.004926 |
ORF7b | 38 | N38K | aaT | aaG | 3 | 3 | B.1.9.5 | 0.017045 |
ORF7b | 38 | N38del | AAT | --- | 3 | 3 | P.1.15 | 0.000697 |
ORF7b | 38 | N38R | aAT | aGA | 2 | 2 | 0.111111 | |
ORF7b | 38 | N38S | aAT | aGC | 2 | 2 | 0.111111 | |
ORF7b | 38 | N38Y | Aat | Tat | 2 | 2 | 0.111111 | |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | A.2.2 | 0.003378 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | A.29 | 0.010638 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AD.2 | 0.000438 |
ORF7b | 38 | N38del2 | AAt | --t | 2 | 2 | All | 0 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | AY.103 | 0.000012 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AY.118 | 0.000125 |
ORF7b | 38 | N38I | aAt | aTt | 2 | 2 | AY.119 | 0.000071 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | AY.23 | 0.000139 |
ORF7b | 38 | N38T | aAt | aCt | 2 | 2 | AY.25 | 0.000012 |
ORF7b | 38 | N38S | aAt | aGt | 2 | 2 | AY.25 | 0.000012 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AY.30 | 0.000791 |
ORF7b | 38 | N38S | aAt | aGt | 2 | 2 | AY.30 | 0.000791 |
ORF7b | 38 | N38I | aAt | aTt | 2 | 2 | AY.4.2 | 0.000043 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AY.4.2 | 0.000043 |
ORF7b | 38 | N38S | aAt | aGt | 2 | 2 | AY.43 | 0.000009 |
ORF7b | 38 | N38S | aAt | aGt | 2 | 2 | AY.44 | 0.000012 |
ORF7b | 38 | N38I | aAt | aTt | 2 | 2 | AY.45 | 0.000243 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AY.47 | 0.000062 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | AY.85 | 0.000854 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | AY.85 | 0.000854 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 2 | B.1.1 | 0.000018 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 2 | B.1.1 | 0.000018 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | B.1.1.25 | 0.001137 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.1.318 | 0.000604 |
ORF7b | 38 | N38K | aaT | aaA | 2 | 2 | B.1.1.33 | 0.000842 |
ORF7b | 38 | N38Y | Aat | Tat | 2 | 2 | B.1.1.7 | 0.000002 |
ORF7b | 38 | N38Y | Aat | Tat | 2 | 2 | B.1.160 | 0.000062 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | B.1.177 | 0.000026 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.234 | 0.000264 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.258 | 0.000133 |
ORF7b | 38 | N38T | aAt | aCt | 2 | 2 | B.1.258.14 | 0.001961 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.351 | 0.000059 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.427 | 0.000101 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.466.2 | 0.000782 |
ORF7b | 38 | N38D | Aat | Gat | 2 | 2 | B.1.526 | 0.000047 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | B.1.582 | 0.000981 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | B.1.596 | 0.000174 |
ORF7b | 38 | N38Y | Aat | Tat | 2 | 2 | B.1.617.2 | 0.000008 |
ORF7b | 38 | N38D | Aat | Gat | 2 | 2 | P.1 | 0.000032 |
ORF7b | 38 | N38N | aaT | aaC | 2 | 2 | P.1 | 0.000032 |
ORF7b | 38 | N38del | AAT | --- | 2 | 2 | P.1.1 | 0.000635 |
ORF7b | 38 | N38S | aAt | aGt | 2 | 2 | P.1.14 | 0.000096 |
ORF7b | 38 | N38K | aaT | aaA | 2 | 2 | P.1.16 | 0.000748 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | A.1 | 0.000282 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | A.2.4 | 0.003367 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.102 | 0.000027 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | AY.105 | 0.000643 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | AY.110 | 0.000113 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | AY.118 | 0.000063 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | AY.119 | 0.000035 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | AY.120.1 | 0.000321 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.121 | 0.000135 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | AY.25 | 0.000006 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.26 | 0.000028 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | AY.26 | 0.000028 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | AY.3 | 0.00001 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | AY.3 | 0.00001 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | AY.3 | 0.00001 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.39.1 | 0.00004 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | AY.4 | 0.000002 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | AY.4 | 0.000002 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | AY.40 | 0.000964 |
ORF7b | 38 | N38del1 | AaT | Ga- | 1 | 1 | AY.43 | 0.000004 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | AY.43 | 0.000004 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | AY.44 | 0.000006 |
ORF7b | 38 | N38del1 | AaT | -aC | 1 | 1 | AY.44 | 0.000006 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | AY.45 | 0.000122 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | AY.46.6 | 0.000072 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | AY.5.4 | 0.000277 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.55 | 0.000917 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.58 | 0.000907 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | AY.61 | 0.000105 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | AY.66 | 0.00107 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.67 | 0.000464 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.71 | 0.000475 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.75 | 0.000056 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | AY.75.1 | 0.00018 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.84 | 0.000437 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | B.1 | 0.000009 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | B.1 | 0.000009 |
ORF7b | 38 | N38del1 | Aat | -at | 1 | 1 | B.1 | 0.000009 |
ORF7b | 38 | N38del1 | aaT | aa- | 1 | 1 | B.1.1 | 0.000018 |
ORF7b | 38 | N38P | AAt | CCt | 1 | 1 | B.1.1 | 0.000018 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | B.1.1.1 | 0.000327 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.1.216 | 0.00089 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | B.1.1.222 | 0.000204 |
ORF7b | 38 | N38T | aAt | aCt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | B.1.1.282 | 0.011628 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7b | 38 | N38R | AAt | CGt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | B.1.1.397 | 0.002252 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.1.44 | 0.00241 |
ORF7b | 38 | N38T | aAt | aCt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.104 | 0.00369 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.110.3 | 0.000718 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.160.26 | 0.002421 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | B.1.177 | 0.000013 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.177.15 | 0.000631 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.177.17 | 0.000821 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.177.57 | 0.000281 |
ORF7b | 38 | N38del2 | AAt | --t | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.177.82 | 0.000477 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.195 | 0.005025 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.2 | 0.000009 |
ORF7b | 38 | N38del1 | Aat | -at | 1 | 1 | B.1.2 | 0.000009 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | B.1.2 | 0.000009 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.210 | 0.002132 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.234 | 0.000132 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.243 | 0.00007 |
ORF7b | 38 | N38del1 | aaT | aa- | 1 | 1 | B.1.243 | 0.00007 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | B.1.258 | 0.000067 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.333 | 0.010526 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.351 | 0.00003 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | B.1.351 | 0.00003 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.36.1 | 0.00114 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.36.29 | 0.000517 |
ORF7b | 38 | N38T | aAt | aCt | 1 | 1 | B.1.36.8 | 0.001 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.369 | 0.000285 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.399 | 0.001934 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.40 | 0.019608 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.400 | 0.000429 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.416 | 0.001269 |
ORF7b | 38 | N38K | aaT | aaG | 1 | 1 | B.1.427 | 0.00005 |
ORF7b | 38 | N38del1 | aaT | aa- | 1 | 1 | B.1.427 | 0.00005 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.429 | 0.000024 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | B.1.429 | 0.000024 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | B.1.438.4 | 0.021277 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.441 | 0.009615 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.497 | 0.000315 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.499 | 0.00105 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.499 | 0.00105 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.526 | 0.000024 |
ORF7b | 38 | N38D | Aat | Gat | 1 | 1 | B.1.556 | 0.007519 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.561 | 0.000397 |
ORF7b | 38 | N38N | aaT | aaC | 1 | 1 | B.1.580 | 0.004065 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | B.1.596 | 0.000087 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF7b | 38 | N38K | aaT | aaA | 1 | 1 | B.1.637 | 0.000073 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | C.26 | 0.007353 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | C.36 | 0.000911 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | C.37 | 0.000116 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | C.37 | 0.000116 |
ORF7b | 38 | N38T | aAt | aCt | 1 | 1 | D.2 | 0.000075 |
ORF7b | 38 | N38Y | Aat | Tat | 1 | 1 | P.1 | 0.000016 |
ORF7b | 38 | N38del | AAT | --- | 1 | 1 | P.1.14 | 0.000048 |
ORF7b | 38 | N38del2 | AAt | --t | 1 | 1 | P.1.14 | 0.000048 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | P.1.2 | 0.001156 |
ORF7b | 38 | N38R | AAt | CGt | 1 | 1 | P.2 | 0.000187 |
ORF7b | 38 | N38I | aAt | aTt | 1 | 1 | P.2 | 0.000187 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | P.2 | 0.000187 |
ORF7b | 38 | N38H | Aat | Cat | 1 | 1 | P.2 | 0.000187 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | Q.3 | 0.000145 |
ORF7b | 38 | N38S | aAt | aGt | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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