CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Y97del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a97Y97del1deltaCta-1631010.61963227682-27684
ORF7a97Y97del1delTac-ac163290.17791427682-27684
ORF7a97Y97del1delTAcC-c163170.10429427682-27684
ORF7a97Y97del1deltAct-c163130.079754627682-27684
ORF7a97Y97del1delTaC-aT16320.012269927682-27684
ORF7a97Y97del1deltACtG-16310.0061349727682-27684

Details of the mutation Y97del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a97Y97del1taCta-101163All0.000019
ORF7a97Y97del1Tac-ac29163All0.000006
ORF7a97Y97del1TAcC-c17163All0.000003
ORF7a97Y97del1tAct-c13163All0.000002
ORF7a97Y97del1TaC-aT2163All0
ORF7a97Y97del1tACtG-1163All0
ORF7a97Y97del1taCta-2840B.1.1.70.000025
ORF7a97Y97del1Tac-ac1040B.1.1.70.000009
ORF7a97Y97del1TAcC-c140B.1.1.70.000001
ORF7a97Y97del1tAct-c140B.1.1.70.000001
ORF7a97Y97del1taCta-3030AY.90.002028
ORF7a97Y97del1TAcC-c1619AY.430.000071
ORF7a97Y97del1taCta-219AY.430.000009
ORF7a97Y97del1tAct-c119AY.430.000004
ORF7a97Y97del1taCta-67B.1.20.000053
ORF7a97Y97del1tAct-c17B.1.20.000009
ORF7a97Y97del1Tac-ac56C.370.00058
ORF7a97Y97del1tAct-c16C.370.000116
ORF7a97Y97del1taCta-35B.1.617.20.000011
ORF7a97Y97del1tACtG-15B.1.617.20.000004
ORF7a97Y97del1tAct-c15B.1.617.20.000004
ORF7a97Y97del1taCta-44B.1.1.10.001307
ORF7a97Y97del1tAct-c34B.1.4270.000151
ORF7a97Y97del1taCta-14B.1.4270.00005
ORF7a97Y97del1taCta-34P.10.000047
ORF7a97Y97del1Tac-ac14P.10.000016
ORF7a97Y97del1Tac-ac23AY.1030.000012
ORF7a97Y97del1taCta-13AY.1030.000006
ORF7a97Y97del1Tac-ac23AY.40.000003
ORF7a97Y97del1tAct-c13AY.40.000002
ORF7a97Y97del1taCta-22AY.250.000012
ORF7a97Y97del1tAct-c22AY.440.000012
ORF7a97Y97del1Tac-ac12B.1.1600.000031
ORF7a97Y97del1taCta-12B.1.1600.000031
ORF7a97Y97del1taCta-12B.1.5260.000024
ORF7a97Y97del1tAct-c12B.1.5260.000024
ORF7a97Y97del1TaC-aT22R.10.00018
ORF7a97Y97del1taCta-11AY.1020.000027
ORF7a97Y97del1tAct-c11AY.1190.000035
ORF7a97Y97del1taCta-11AY.230.00007
ORF7a97Y97del1taCta-11AY.290.000016
ORF7a97Y97del1Tac-ac11AY.29.10.000221
ORF7a97Y97del1taCta-11AY.30.00001
ORF7a97Y97del1taCta-11AY.340.000097
ORF7a97Y97del1Tac-ac11AY.46.40.000165
ORF7a97Y97del1taCta-11AY.46.60.000072
ORF7a97Y97del1taCta-11AY.50.000021
ORF7a97Y97del1taCta-11AY.630.000387
ORF7a97Y97del1taCta-11AY.710.000475
ORF7a97Y97del1taCta-11AY.9.20.000037
ORF7a97Y97del1taCta-11AY.940.000443
ORF7a97Y97del1Tac-ac11B.10.000009
ORF7a97Y97del1taCta-11B.1.1.1010.01
ORF7a97Y97del1Tac-ac11B.1.1.2140.000055
ORF7a97Y97del1Tac-ac11B.1.1.2840.000107
ORF7a97Y97del1Tac-ac11B.1.1.5190.00004
ORF7a97Y97del1taCta-11B.1.1770.000013
ORF7a97Y97del1taCta-11B.1.177.120.000152
ORF7a97Y97del1taCta-11B.1.177.50.001242
ORF7a97Y97del1Tac-ac11B.1.177.810.000189
ORF7a97Y97del1taCta-11B.1.4990.00105
ORF7a97Y97del1taCta-11B.1.5670.003333
ORF7a97Y97del1Tac-ac11B.1.5750.000303
ORF7a97Y97del1taCta-11C.36.30.000567
ORF7a97Y97del1taCta-11D.20.000075