CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Y40Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a40Y40YsyntaCtaT2175121751127511-27513

Details of the mutation Y40Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a40Y40YtaCtaT2175121751All0.00416
ORF7a40Y40YtaCtaT1037410374B.1.1.70.009287
ORF7a40Y40YtaCtaT27922792AY.40.004346
ORF7a40Y40YtaCtaT12741274B.1.4290.029976
ORF7a40Y40YtaCtaT562562C.300.970639
ORF7a40Y40YtaCtaT423423AY.1030.002626
ORF7a40Y40YtaCtaT422422B.1.617.20.001589
ORF7a40Y40YtaCtaT387387B.1.177.160.257143
ORF7a40Y40YtaCtaT378378AY.250.002274
ORF7a40Y40YtaCtaT364364B.1.1.10.118915
ORF7a40Y40YtaCtaT332332AY.430.001471
ORF7a40Y40YtaCtaT295295B.1.1.4340.102823
ORF7a40Y40YtaCtaT289289B.1.20.002545
ORF7a40Y40YtaCtaT259259B.1.1.390.132008
ORF7a40Y40YtaCtaT250250AY.740.028912
ORF7a40Y40YtaCtaT198198B.10.001814
ORF7a40Y40YtaCtaT167167AY.440.001016
ORF7a40Y40YtaCtaT147147C.30.10.986577
ORF7a40Y40YtaCtaT139139B.1.177.820.066348
ORF7a40Y40YtaCtaT124124AY.30.001233
ORF7a40Y40YtaCtaT115115AY.1020.003049
ORF7a40Y40YtaCtaT114114Q.10.014401
ORF7a40Y40YtaCtaT9191B.1.1.5190.003614
ORF7a40Y40YtaCtaT8585AY.1200.00316
ORF7a40Y40YtaCtaT8484B.1.10.001524
ORF7a40Y40YtaCtaT8181P.10.001276
ORF7a40Y40YtaCtaT7171B.1.1770.000935
ORF7a40Y40YtaCtaT6767AY.260.001897
ORF7a40Y40YtaCtaT6161AY.4.20.001323
ORF7a40Y40YtaCtaT5757AY.1190.002013
ORF7a40Y40YtaCtaT5656P.1.130.050314
ORF7a40Y40YtaCtaT5353AY.290.000836
ORF7a40Y40YtaCtaT4747B.1.2430.00327
ORF7a40Y40YtaCtaT4646B.1.1600.001435
ORF7a40Y40YtaCtaT4141B.1.258.220.109333
ORF7a40Y40YtaCtaT4040B.1.1.3180.01207
ORF7a40Y40YtaCtaT3737AY.1000.001702
ORF7a40Y40YtaCtaT3636AY.1140.00832
ORF7a40Y40YtaCtaT3232AY.1170.002705
ORF7a40Y40YtaCtaT3232AY.1180.002005
ORF7a40Y40YtaCtaT3232B.1.2210.002273
ORF7a40Y40YtaCtaT3232B.1.3510.000951
ORF7a40Y40YtaCtaT3131B.1.110.30.02227
ORF7a40Y40YtaCtaT2929AY.270.001877
ORF7a40Y40YtaCtaT2929AY.420.001167
ORF7a40Y40YtaCtaT2929B.1.177.570.008148
ORF7a40Y40YtaCtaT2828B.1.5750.008495
ORF7a40Y40YtaCtaT2727AY.300.010685
ORF7a40Y40YtaCtaT2727B.1.258.170.002807
ORF7a40Y40YtaCtaT2626AF.10.962963
ORF7a40Y40YtaCtaT2626B.1.6370.0019
ORF7a40Y40YtaCtaT2626D.20.001951
ORF7a40Y40YtaCtaT2525B.1.6210.002213
ORF7a40Y40YtaCtaT2424AY.110.032129
ORF7a40Y40YtaCtaT2424R.10.00216
ORF7a40Y40YtaCtaT2323AY.390.000568
ORF7a40Y40YtaCtaT2323B.1.4270.001161
ORF7a40Y40YtaCtaT2222AY.230.001534
ORF7a40Y40YtaCtaT2222B.1.5760.019946
ORF7a40Y40YtaCtaT2020AY.50.000413
ORF7a40Y40YtaCtaT2020AY.98.10.000969
ORF7a40Y40YtaCtaT1717AY.200.000661
ORF7a40Y40YtaCtaT1717AY.750.000952
ORF7a40Y40YtaCtaT1717B.1.2400.003665
ORF7a40Y40YtaCtaT1616AY.330.001068
ORF7a40Y40YtaCtaT1616AY.450.001947
ORF7a40Y40YtaCtaT1616B.1.1.3720.011019
ORF7a40Y40YtaCtaT1313AY.39.10.000515
ORF7a40Y40YtaCtaT1313AY.910.009496
ORF7a40Y40YtaCtaT1212AY.9.20.000441
ORF7a40Y40YtaCtaT1212B.1.1.280.003735
ORF7a40Y40YtaCtaT1111AY.470.000342
ORF7a40Y40YtaCtaT1111AY.90.000744
ORF7a40Y40YtaCtaT1111B.1.1.2580.035831
ORF7a40Y40YtaCtaT1010AE.80.00489
ORF7a40Y40YtaCtaT1010AY.460.001041
ORF7a40Y40YtaCtaT1010B.1.1.1680.263158
ORF7a40Y40YtaCtaT1010B.1.4000.00429
ORF7a40Y40YtaCtaT99AY.75.10.001623
ORF7a40Y40YtaCtaT99B.1.1.250.005117
ORF7a40Y40YtaCtaT99B.1.2580.000599
ORF7a40Y40YtaCtaT99P.1.10.002859
ORF7a40Y40YtaCtaT99P.20.00168
ORF7a40Y40YtaCtaT88AY.1160.002294
ORF7a40Y40YtaCtaT88AY.350.001864
ORF7a40Y40YtaCtaT88B.1.2930.1
ORF7a40Y40YtaCtaT88B.1.4330.025559
ORF7a40Y40YtaCtaT77AY.130.001127
ORF7a40Y40YtaCtaT77AY.23.10.002922
ORF7a40Y40YtaCtaT77AY.3.10.000597
ORF7a40Y40YtaCtaT77AY.46.60.000505
ORF7a40Y40YtaCtaT77AY.610.000733
ORF7a40Y40YtaCtaT77B.1.177.100.006146
ORF7a40Y40YtaCtaT77B.1.36.160.009972
ORF7a40Y40YtaCtaT77C.370.000812
ORF7a40Y40YtaCtaT66AY.120.2.10.00299
ORF7a40Y40YtaCtaT66AY.850.002563
ORF7a40Y40YtaCtaT66B.1.1.2070.007092
ORF7a40Y40YtaCtaT66B.1.4520.082192
ORF7a40Y40YtaCtaT66B.1.466.20.002347
ORF7a40Y40YtaCtaT66B.1.5170.002562
ORF7a40Y40YtaCtaT66B.1.564.10.009464
ORF7a40Y40YtaCtaT66B.1.5820.002944
ORF7a40Y40YtaCtaT66B.1.617.10.000774
ORF7a40Y40YtaCtaT55A.2.50.002495
ORF7a40Y40YtaCtaT55AY.1130.000712
ORF7a40Y40YtaCtaT55AY.140.00044
ORF7a40Y40YtaCtaT55AY.320.002662
ORF7a40Y40YtaCtaT55AY.340.000485
ORF7a40Y40YtaCtaT55AY.400.004822
ORF7a40Y40YtaCtaT55AY.540.000477
ORF7a40Y40YtaCtaT55AY.550.004587
ORF7a40Y40YtaCtaT55B.1.1.1610.017668
ORF7a40Y40YtaCtaT55B.1.1.1890.007564
ORF7a40Y40YtaCtaT55B.1.1.3170.002058
ORF7a40Y40YtaCtaT55B.1.2320.002687
ORF7a40Y40YtaCtaT55B.1.5960.000436
ORF7a40Y40YtaCtaT55P.1.140.000239
ORF7a40Y40YtaCtaT55P.50.068493
ORF7a40Y40YtaCtaT44AY.1110.000733
ORF7a40Y40YtaCtaT44AY.1210.000541
ORF7a40Y40YtaCtaT44AY.500.003197
ORF7a40Y40YtaCtaT44AY.620.001743
ORF7a40Y40YtaCtaT44AY.7.10.000451
ORF7a40Y40YtaCtaT44AY.99.20.000369
ORF7a40Y40YtaCtaT44B.1.1.2140.000222
ORF7a40Y40YtaCtaT44B.1.1.2320.00726
ORF7a40Y40YtaCtaT44B.1.1.4310.064516
ORF7a40Y40YtaCtaT44B.1.1.500.002716
ORF7a40Y40YtaCtaT44B.1.1.700.001364
ORF7a40Y40YtaCtaT44B.1.177.170.003284
ORF7a40Y40YtaCtaT44B.1.258.30.0067
ORF7a40Y40YtaCtaT44B.1.3110.001098
ORF7a40Y40YtaCtaT44B.1.3690.001141
ORF7a40Y40YtaCtaT44B.1.438.10.000429
ORF7a40Y40YtaCtaT44B.1.6000.023392
ORF7a40Y40YtaCtaT44C.130.102564
ORF7a40Y40YtaCtaT44Q.80.00066
ORF7a40Y40YtaCtaT33A.2.5.20.004717
ORF7a40Y40YtaCtaT33AY.1070.001398
ORF7a40Y40YtaCtaT33AY.1080.003308
ORF7a40Y40YtaCtaT33AY.5.30.001012
ORF7a40Y40YtaCtaT33AY.60.000123
ORF7a40Y40YtaCtaT33AY.660.003209
ORF7a40Y40YtaCtaT33AY.980.000237
ORF7a40Y40YtaCtaT33B.1.1.2200.005576
ORF7a40Y40YtaCtaT33B.1.1.2220.000612
ORF7a40Y40YtaCtaT33B.1.1.3060.001315
ORF7a40Y40YtaCtaT33B.1.177.560.002003
ORF7a40Y40YtaCtaT33B.1.351.20.000908
ORF7a40Y40YtaCtaT33B.1.360.000438
ORF7a40Y40YtaCtaT33B.1.36.10.003421
ORF7a40Y40YtaCtaT33B.1.4160.003807
ORF7a40Y40YtaCtaT33B.1.5320.018634
ORF7a40Y40YtaCtaT33B.1.619.10.001924
ORF7a40Y40YtaCtaT33B.1.6280.001057
ORF7a40Y40YtaCtaT33P.1.120.001452
ORF7a40Y40YtaCtaT220.111111
ORF7a40Y40YtaCtaT22AD.20.000438
ORF7a40Y40YtaCtaT22AY.10.000791
ORF7a40Y40YtaCtaT22AY.1050.001286
ORF7a40Y40YtaCtaT22AY.190.002281
ORF7a40Y40YtaCtaT22AY.4.40.000818
ORF7a40Y40YtaCtaT22AY.4.50.000215
ORF7a40Y40YtaCtaT22AY.510.001818
ORF7a40Y40YtaCtaT22AY.840.000875
ORF7a40Y40YtaCtaT22B0.000256
ORF7a40Y40YtaCtaT22B.1.1.1570.001826
ORF7a40Y40YtaCtaT22B.1.1.2800.006173
ORF7a40Y40YtaCtaT22B.1.1.3350.025974
ORF7a40Y40YtaCtaT22B.1.1.4670.038462
ORF7a40Y40YtaCtaT22B.1.1.510.003436
ORF7a40Y40YtaCtaT22B.1.1.610.017544
ORF7a40Y40YtaCtaT22B.1.1100.00905
ORF7a40Y40YtaCtaT22B.1.1470.001512
ORF7a40Y40YtaCtaT22B.1.177.210.000153
ORF7a40Y40YtaCtaT22B.1.177.330.003289
ORF7a40Y40YtaCtaT22B.1.177.40.000422
ORF7a40Y40YtaCtaT22B.1.177.580.002663
ORF7a40Y40YtaCtaT22B.1.177.600.000437
ORF7a40Y40YtaCtaT22B.1.177.800.003824
ORF7a40Y40YtaCtaT22B.1.36.380.003284
ORF7a40Y40YtaCtaT22B.1.3750.001639
ORF7a40Y40YtaCtaT22B.1.3970.009709
ORF7a40Y40YtaCtaT22B.1.4740.003802
ORF7a40Y40YtaCtaT22B.1.5090.001732
ORF7a40Y40YtaCtaT22B.1.5600.009259
ORF7a40Y40YtaCtaT22B.1.621.10.001012
ORF7a40Y40YtaCtaT22P.1.150.000465
ORF7a40Y40YtaCtaT22P.1.160.000748
ORF7a40Y40YtaCtaT11A.20.000662
ORF7a40Y40YtaCtaT11A.230.010526
ORF7a40Y40YtaCtaT11A.290.005319
ORF7a40Y40YtaCtaT11AD.10.004115
ORF7a40Y40YtaCtaT11AY.1060.000335
ORF7a40Y40YtaCtaT11AY.240.000431
ORF7a40Y40YtaCtaT11AY.360.000148
ORF7a40Y40YtaCtaT11AY.4.2.10.000149
ORF7a40Y40YtaCtaT11AY.46.40.000165
ORF7a40Y40YtaCtaT11AY.5.10.003759
ORF7a40Y40YtaCtaT11AY.580.000907
ORF7a40Y40YtaCtaT11AY.670.000464
ORF7a40Y40YtaCtaT11AY.680.000274
ORF7a40Y40YtaCtaT11AY.700.000209
ORF7a40Y40YtaCtaT11AY.760.004831
ORF7a40Y40YtaCtaT11AY.790.001211
ORF7a40Y40YtaCtaT11AY.9.10.000084
ORF7a40Y40YtaCtaT11AY.950.000761
ORF7a40Y40YtaCtaT11AY.960.002075
ORF7a40Y40YtaCtaT11AY.990.001049
ORF7a40Y40YtaCtaT11AZ.20.000821
ORF7a40Y40YtaCtaT11B.1.1.1520.04
ORF7a40Y40YtaCtaT11B.1.1.1900.05
ORF7a40Y40YtaCtaT11B.1.1.1940.00495
ORF7a40Y40YtaCtaT11B.1.1.2160.00089
ORF7a40Y40YtaCtaT11B.1.1.2430.004082
ORF7a40Y40YtaCtaT11B.1.1.2690.001353
ORF7a40Y40YtaCtaT11B.1.1.2720.005208
ORF7a40Y40YtaCtaT11B.1.1.3110.000358
ORF7a40Y40YtaCtaT11B.1.1.3160.000925
ORF7a40Y40YtaCtaT11B.1.1.3440.010753
ORF7a40Y40YtaCtaT11B.1.1.3710.010417
ORF7a40Y40YtaCtaT11B.1.1.3750.011905
ORF7a40Y40YtaCtaT11B.1.1.3970.002252
ORF7a40Y40YtaCtaT11B.1.1.4090.002833
ORF7a40Y40YtaCtaT11B.1.1.4120.007634
ORF7a40Y40YtaCtaT11B.1.1.4190.007407
ORF7a40Y40YtaCtaT11B.1.1.4200.001006
ORF7a40Y40YtaCtaT11B.1.1.4290.004608
ORF7a40Y40YtaCtaT11B.1.1.4620.008621
ORF7a40Y40YtaCtaT11B.1.1.4860.001577
ORF7a40Y40YtaCtaT11B.1.1.5000.02
ORF7a40Y40YtaCtaT11B.1.1.520.012195
ORF7a40Y40YtaCtaT11B.1.1.5280.004808
ORF7a40Y40YtaCtaT11B.1.1.630.000386
ORF7a40Y40YtaCtaT11B.1.1.830.00271
ORF7a40Y40YtaCtaT11B.1.1.980.018519
ORF7a40Y40YtaCtaT11B.1.1.990.02381
ORF7a40Y40YtaCtaT11B.1.1110.001175
ORF7a40Y40YtaCtaT11B.1.1260.001276
ORF7a40Y40YtaCtaT11B.1.1390.000733
ORF7a40Y40YtaCtaT11B.1.160.280.002924
ORF7a40Y40YtaCtaT11B.1.160.320.004292
ORF7a40Y40YtaCtaT11B.1.177.120.000152
ORF7a40Y40YtaCtaT11B.1.177.200.001517
ORF7a40Y40YtaCtaT11B.1.177.440.000519
ORF7a40Y40YtaCtaT11B.1.177.630.002703
ORF7a40Y40YtaCtaT11B.1.177.70.000165
ORF7a40Y40YtaCtaT11B.1.177.730.000566
ORF7a40Y40YtaCtaT11B.1.177.840.006667
ORF7a40Y40YtaCtaT11B.1.2220.001692
ORF7a40Y40YtaCtaT11B.1.2340.000132
ORF7a40Y40YtaCtaT11B.1.2390.001221
ORF7a40Y40YtaCtaT11B.1.258.100.011364
ORF7a40Y40YtaCtaT11B.1.3130.006579
ORF7a40Y40YtaCtaT11B.1.3200.001245
ORF7a40Y40YtaCtaT11B.1.3460.001311
ORF7a40Y40YtaCtaT11B.1.3490.000715
ORF7a40Y40YtaCtaT11B.1.36.220.001208
ORF7a40Y40YtaCtaT11B.1.36.290.000517
ORF7a40Y40YtaCtaT11B.1.3890.001002
ORF7a40Y40YtaCtaT11B.1.4040.001302
ORF7a40Y40YtaCtaT11B.1.4080.00369
ORF7a40Y40YtaCtaT11B.1.4090.000781
ORF7a40Y40YtaCtaT11B.1.4110.003704
ORF7a40Y40YtaCtaT11B.1.4220.000812
ORF7a40Y40YtaCtaT11B.1.4530.003236
ORF7a40Y40YtaCtaT11B.1.4560.003268
ORF7a40Y40YtaCtaT11B.1.5080.025641
ORF7a40Y40YtaCtaT11B.1.5260.000024
ORF7a40Y40YtaCtaT11B.1.5460.003704
ORF7a40Y40YtaCtaT11B.1.5510.00129
ORF7a40Y40YtaCtaT11B.1.5610.000397
ORF7a40Y40YtaCtaT11B.1.575.20.004808
ORF7a40Y40YtaCtaT11B.1.5770.000687
ORF7a40Y40YtaCtaT11B.1.5950.000261
ORF7a40Y40YtaCtaT11B.1.5970.00463
ORF7a40Y40YtaCtaT11B.1.6100.003546
ORF7a40Y40YtaCtaT11B.1.6270.00202
ORF7a40Y40YtaCtaT11B.1.6340.003425
ORF7a40Y40YtaCtaT11B.120.00641
ORF7a40Y40YtaCtaT11B.30.000831
ORF7a40Y40YtaCtaT11B.310.003731
ORF7a40Y40YtaCtaT11B.400.000364
ORF7a40Y40YtaCtaT11B.550.00295
ORF7a40Y40YtaCtaT11C.50.090909
ORF7a40Y40YtaCtaT11N.40.004255
ORF7a40Y40YtaCtaT11N.50.001767
ORF7a40Y40YtaCtaT11P.1.170.000162
ORF7a40Y40YtaCtaT11P.30.001595
ORF7a40Y40YtaCtaT11W.40.001351