CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Y40X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a40Y40XnonsyntaCtaA2321630.70258627511-27513
ORF7a40Y40XnonsyntaCtaG232640.27586227511-27513
ORF7a40Y40XnonsyntACtGA23250.021551727511-27513

Details of the mutation Y40X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a40Y40XtaCtaA163232All0.000031
ORF7a40Y40XtaCtaG64232All0.000012
ORF7a40Y40XtACtGA5232All0.000001
ORF7a40Y40XtaCtaA4763B.1.1.70.000042
ORF7a40Y40XtaCtaG1663B.1.1.70.000014
ORF7a40Y40XtaCtaA3637AY.40.000056
ORF7a40Y40XtaCtaG137AY.40.000002
ORF7a40Y40XtaCtaG2124B.1.1600.000655
ORF7a40Y40XtaCtaA224B.1.1600.000062
ORF7a40Y40XtACtGA124B.1.1600.000031
ORF7a40Y40XtaCtaG1321B.1.617.20.000049
ORF7a40Y40XtaCtaA621B.1.617.20.000023
ORF7a40Y40XtACtGA221B.1.617.20.000008
ORF7a40Y40XtaCtaA1112B.10.000101
ORF7a40Y40XtaCtaG112B.10.000009
ORF7a40Y40XtaCtaA99AY.50.000186
ORF7a40Y40XtaCtaA66AY.1030.000037
ORF7a40Y40XtaCtaA56AY.250.00003
ORF7a40Y40XtACtGA16AY.250.000006
ORF7a40Y40XtaCtaG56AY.30.00005
ORF7a40Y40XtaCtaA16AY.30.00001
ORF7a40Y40XtaCtaA66AY.46.40.000987
ORF7a40Y40XtaCtaG34AY.430.000013
ORF7a40Y40XtaCtaA14AY.430.000004
ORF7a40Y40XtaCtaA44B.1.10.000073
ORF7a40Y40XtaCtaA33AY.1020.00008
ORF7a40Y40XtaCtaA33AY.290.000047
ORF7a40Y40XtaCtaA22AY.1200.000074
ORF7a40Y40XtaCtaA12AY.440.000006
ORF7a40Y40XtaCtaG12AY.440.000006
ORF7a40Y40XtaCtaA22AY.470.000062
ORF7a40Y40XtaCtaA22B.1.1.3850.008929
ORF7a40Y40XtaCtaA22B.1.1770.000026
ORF7a40Y40XtaCtaA22B.1.177.760.004988
ORF7a40Y40XtaCtaA22B.1.5750.000607
ORF7a40Y40XtaCtaA22P.10.000032
ORF7a40Y40XtaCtaG11AY.1190.000035
ORF7a40Y40XtaCtaA11AY.1210.000135
ORF7a40Y40XtaCtaA11AY.260.000028
ORF7a40Y40XtaCtaA11AY.390.000025
ORF7a40Y40XtaCtaA11AY.700.000209
ORF7a40Y40XtaCtaA11B.1.2210.000071
ORF7a40Y40XtaCtaA11B.1.3510.00003
ORF7a40Y40XtaCtaG11B.1.4270.00005
ORF7a40Y40XtaCtaG11B.1.4290.000024
ORF7a40Y40XtACtGA11B.1.5380.008065
ORF7a40Y40XtaCtaA11B.1.5760.000907
ORF7a40Y40XtaCtaA11C.370.000116